Your job contains 1 sequence.
>000879
MPVDAASIMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKV
THLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNYDKSGYELETMEAEAK
DSEEEIEVASLKQFGGRDVNKSPHNLNVGIINAHESPKSTLEGQGLLVGSTIPEASSGID
NATDMLSTPSRVSRSHQISGFDNVNITEVNGCHYTGASRDNSHEKTPNSAKVKSDLVPTS
KNAEISYHSGSKFCSLNYSRKTPRKSILTMSSGKVDNDVLNIISSKVENAETRTVTACGE
IPKRGGELCHEEESIVLPQKRMSNSTGAGSKSQKMSHNAAECNPRSPINYKTPVSETKSS
ACHSFETGNHLSPGSNGHYTIETATPSTAPNKKPLTPDLPSLKTVTSEALHSEGADRNAL
ETCRGSKESTVASKTDNEDFGMGSVHLDGEAEDAQNLHQDLEGSSAKNRFLVMDKSPRPV
NIDSPQVGKDKLIAKPIRKKMVAKKAFGSGHTTNRKGSIYSNKISSLSSPAVCLSREVER
ANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGDGIKTMDDETEAPDEKYEIE
FEKMLNNEKSEGVQSIHKEDTMMKRVPGVGHEAHDSMVYGRDGITGKEVMNAEVGMTVSG
KRFDLDESTSKMDGMKSKRKIRPSDKANGNVSADKETVESWDDEAEAADEKVGNVFEEAL
NDEKPEGVELIHKEDAELKRIPGAGHEAHDSVVCRHDEITGKEGINAQVRTTLSGEMFDL
DESNSKRDGTKCKINRAKKRPSGKASLKTLSADKGTVESKKDVVGEENLNGEKNEECREK
EKNVLLPRSKTRVITASASKVGSSDEVEKENRPVADEGQTSSPGVGKSILKSMKVSMKNK
IGGNVNSNSIPLDKSLNKLDKSLNKLKDEPIWFILSGHRLQRKEFQVVIRHLKGRLCRDS
HQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLS
EDGAINLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSP
PYTRFLNSGVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFVCKPGYSLERHVQYN
THAWAEKSLSNLLSKAEEIVMDLTPPNDYDTDKITCQACGCSDRGEVMLICGDESGSVGC
GVGMHIDCCDPPLESVPEEDWFCPTCTRSRINPSKRTSS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000879
(1239 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132198 - symbol:AT4G02110 "AT4G02110" species... 974 1.2e-153 2
UNIPROTKB|Q800K6 - symbol:topbp1-A "DNA topoisomerase 2-b... 204 5.7e-17 3
UNIPROTKB|Q92547 - symbol:TOPBP1 "DNA topoisomerase 2-bin... 166 2.0e-14 4
UNIPROTKB|G3X684 - symbol:TOPBP1 "Uncharacterized protein... 171 4.6e-12 3
UNIPROTKB|Q9BQI6 - symbol:ANKRD32 "Ankyrin repeat domain-... 203 4.7e-12 1
UNIPROTKB|D6RED9 - symbol:ANKRD32 "Ankyrin repeat domain-... 172 1.2e-11 1
MGI|MGI:2145448 - symbol:Ankrd32 "ankyrin repeat domain 3... 199 1.3e-11 1
MGI|MGI:1920018 - symbol:Topbp1 "topoisomerase (DNA) II b... 167 1.5e-11 3
RGD|1562949 - symbol:Topbp1 "topoisomerase (DNA) II bindi... 170 1.5e-11 4
RGD|1304857 - symbol:Ankrd32 "ankyrin repeat domain 32" s... 192 7.2e-11 1
FB|FBgn0002878 - symbol:mus101 "mutagen-sensitive 101" sp... 149 1.8e-10 3
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 178 3.3e-09 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 178 3.3e-09 1
UNIPROTKB|F1MM85 - symbol:ANKRD32 "Ankyrin repeat domain-... 171 1.3e-08 1
TAIR|locus:2033691 - symbol:AT1G67180 species:3702 "Arabi... 169 2.2e-08 2
UNIPROTKB|Q6ZW49 - symbol:PAXIP1 "PAX-interacting protein... 112 9.4e-08 3
MGI|MGI:2141847 - symbol:Phrf1 "PHD and ring finger domai... 164 3.3e-07 2
UNIPROTKB|I3LU11 - symbol:PHRF1 "Uncharacterized protein"... 157 6.9e-07 1
RGD|1307547 - symbol:Paxip1 "PAX interacting (with transc... 113 8.7e-07 2
ZFIN|ZDB-GENE-041010-214 - symbol:paxip1 "PAX interacting... 105 1.2e-06 2
UNIPROTKB|J9P712 - symbol:PHRF1 "Uncharacterized protein"... 153 1.7e-06 2
UNIPROTKB|A0JNA8 - symbol:PAXIP1 "PAX-interacting protein... 104 1.8e-06 2
ASPGD|ASPL0000016982 - symbol:AN10434 species:162425 "Eme... 118 2.0e-06 3
ZFIN|ZDB-GENE-030131-624 - symbol:phrf1 "PHD and ring fin... 158 2.2e-06 2
WB|WBGene00009507 - symbol:mus-101 species:6239 "Caenorha... 115 2.7e-06 4
UNIPROTKB|Q9P1Y6 - symbol:PHRF1 "PHD and RING finger doma... 160 2.7e-06 2
UNIPROTKB|G3MZP9 - symbol:PAXIP1 "PAX-interacting protein... 104 2.8e-06 2
UNIPROTKB|E9PJ24 - symbol:PHRF1 "PHD and RING finger doma... 160 6.9e-06 2
UNIPROTKB|H0YCN2 - symbol:RSF1 "Remodeling and spacing fa... 114 6.9e-06 2
CGD|CAL0004594 - symbol:ESC4 species:5476 "Candida albica... 145 7.7e-06 3
UNIPROTKB|Q5ALY1 - symbol:ESC4 "Putative uncharacterized ... 145 7.7e-06 3
UNIPROTKB|F8WEF5 - symbol:PHRF1 "PHD and RING finger doma... 160 8.7e-06 2
MGI|MGI:1890430 - symbol:Paxip1 "PAX interacting (with tr... 111 8.9e-06 3
UNIPROTKB|F1P482 - symbol:PAXIP1 "Uncharacterized protein... 102 9.7e-06 3
RGD|708360 - symbol:Phrf1 "PHD and ring finger domains 1"... 159 1.9e-05 2
UNIPROTKB|Q63625 - symbol:Phrf1 "PHD and RING finger doma... 159 1.9e-05 2
UNIPROTKB|Q96T23 - symbol:RSF1 "Remodeling and spacing fa... 114 2.6e-05 2
POMBASE|SPBC582.05c - symbol:brc1 "BRCT domain protein Br... 95 5.0e-05 2
UNIPROTKB|F1PXY6 - symbol:PHRF1 "Uncharacterized protein"... 153 0.00012 2
UNIPROTKB|F1SSQ2 - symbol:BARD1 "Uncharacterized protein"... 119 0.00021 2
MGI|MGI:1923718 - symbol:Uhrf2 "ubiquitin-like, containin... 128 0.00038 1
RGD|1309990 - symbol:Uhrf2 "ubiquitin-like with PHD and r... 128 0.00038 1
CGD|CAL0003038 - symbol:orf19.6506 species:5476 "Candida ... 109 0.00043 2
UNIPROTKB|I3LTW3 - symbol:I3LTW3 "Uncharacterized protein... 101 0.00045 1
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 130 0.00048 1
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 130 0.00048 1
TAIR|locus:2031412 - symbol:MEI1 "AT1G77320" species:3702... 120 0.00057 2
TAIR|locus:2169779 - symbol:ATXR6 "AT5G24330" species:370... 121 0.00061 1
ZFIN|ZDB-GENE-091204-206 - symbol:si:dkey-21n12.3 "si:dke... 114 0.00062 2
UNIPROTKB|Q96PU4 - symbol:UHRF2 "E3 ubiquitin-protein lig... 125 0.00079 1
TAIR|locus:504955937 - symbol:AT2G22795 "AT2G22795" speci... 124 0.00090 1
>TAIR|locus:2132198 [details] [associations]
symbol:AT4G02110 "AT4G02110" species:3702 "Arabidopsis
thaliana" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR001357
Pfam:PF00533 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161493
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AF001308
KO:K10728 IPI:IPI00534436 IPI:IPI01020132 PIR:T01512
RefSeq:NP_192120.4 UniGene:At.54093 ProteinModelPortal:O04251
SMR:O04251 PaxDb:O04251 PRIDE:O04251 GeneID:828135
KEGG:ath:AT4G02110 TAIR:At4g02110 eggNOG:KOG1929
HOGENOM:HOG000176902 InParanoid:O04251 OMA:CISADYL
Genevestigator:O04251 Uniprot:O04251
Length = 1329
Score = 974 (347.9 bits), Expect = 1.2e-153, Sum P(2) = 1.2e-153
Identities = 181/309 (58%), Positives = 222/309 (71%)
Query: 849 SKTRVITASASKVGSSDEVEKENRPVADEGQTSSPGVGKSILKSMKVSMKNKIGGNVNSN 908
S T VG + EKEN V +E + G +S + KV+ K G
Sbjct: 1016 SGTEATDTVMKDVGDNSAKEKENIAVDNESRKVGSGGDQSPVARKKVAKSAKTGTKAEKE 1075
Query: 909 SIPXXXXXXXXXXXXXXXXXEPIWFILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQAT 968
S EP +FI+SG R QR E+Q +IR LKG+ CRDSHQWSYQAT
Sbjct: 1076 SKQLRVNPLASRKVFQDQEHEPKFFIVSGPRSQRNEYQQIIRRLKGKCCRDSHQWSYQAT 1135
Query: 969 HFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLE 1028
HFIAPEIRRTEKFFAAAASG WILKTDY++ +AGK L EEPYEWH +GLS DGAINLE
Sbjct: 1136 HFIAPEIRRTEKFFAAAASGSWILKTDYVADSKEAGKLLQEEPYEWHSSGLSADGAINLE 1195
Query: 1029 APRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNS 1088
+P+KWRL+RE+TGHGA +G+RI+VYGDC P LDTLKR VKAGDG ILAT+PPYTRFLN
Sbjct: 1196 SPKKWRLVREKTGHGALYGLRIVVYGDCTIPCLDTLKRAVKAGDGTILATAPPYTRFLNQ 1255
Query: 1089 GVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFVCKPGYSLERHVQYNTHAWAEKS 1148
DFA++SPGMPR D+W+QEF++HEIPCV++DYLVE+VCKPGY+L++HV YNT++WAEKS
Sbjct: 1256 NTDFALISPGMPRDDVWIQEFIRHEIPCVLSDYLVEYVCKPGYALDKHVLYNTNSWAEKS 1315
Query: 1149 LSNLLSKAE 1157
+ + +A+
Sbjct: 1316 FNKMQLRAD 1324
Score = 546 (197.3 bits), Expect = 1.2e-153, Sum P(2) = 1.2e-153
Identities = 235/861 (27%), Positives = 365/861 (42%)
Query: 4 DAASIMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHL 63
+A SI+YRPL+DLNGI G+ +LV+CLTGYQ DREDIM +V LMG QFSKPLVAN+VTHL
Sbjct: 91 NANSILYRPLRDLNGIPGSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANRVTHL 150
Query: 64 ICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNYDKSGYELXXXXXXXXXXX 123
ICYKFEGEKYELAK+IK IKLVNHRWLEDCL+ W+LLPEV+Y+ SGYEL
Sbjct: 151 ICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLLPEVDYEISGYELDIMEASARDSE 210
Query: 124 XXXXXXSLKQFGGRDVNKSPHNLNVGIINAHESPKSTLEGQGLLVGSTIPEASSGIDNAT 183
S+K N SP L VG + A E K G+ + E SS + +
Sbjct: 211 DEAEDASVKP-----ANTSPLGLRVGAVPAVEISKPG--GKDF----PLEEGSSLCNTSK 259
Query: 184 DMLSTPSRVSRSHQISGFDNVNITEVNGCHYTGASRDNSHEKTPNS--AKVKSDLVPTSK 241
D TP R R + ++ + + + +Y R + KTP +K+++D TS
Sbjct: 260 DNWLTPKRTDRPFEAMVSTDLGVAQQH--NYVSPIRVAN--KTPEQGMSKMETD-GSTSI 314
Query: 242 NAEISYHSGSKFCSLNYSRKTPRKSILTM-SSGKVDNDVLNIISSKVENAETRTVTACGE 300
N I HS S +++P L SSG+ + ++ K +A + + G
Sbjct: 315 NRSIRRHSSLATYSRKTLQRSPETDTLGKESSGQNRSLRMDDKGLKASSAFNTSASKSGS 374
Query: 301 IPKRGG--------ELCHEEE-SIVLPQKRMSNSTGAGSKSQKMSHNAA----------- 340
+R ++ H EE ++PQ + ++ + + S ++ HN+
Sbjct: 375 SMERTSLFRDLGKIDMLHGEEFPPMMPQAKFTDGSVSRKDSLRVHHNSEASIPPPSSLLL 434
Query: 341 -ECNPRSPINYKTPVSETKSSACHSFETGNHLSPGSNGHYTIETATPSTAPNKKPLTPDL 399
E P SP + PV S S E G H SP T E T + N P+ L
Sbjct: 435 QELRPSSPNDNLRPVMSI-SDPTESEEAG-HKSP------TSELNTKLLSSNVVPMVDAL 486
Query: 400 PSLKTVTSEALHSEGADRNALETCRGSKESTVASKTDNEDFGMGSVHLDGEAEDAQNLHQ 459
+ + + S E +++ E R ++ + + SV + E A L
Sbjct: 487 STAENIISNCAWDEIPEKSLTE--RMTENVLLQEQRSGSPKQNLSV-VPNLREAAHEL-- 541
Query: 460 DLEGSSAK--NRFLV-MDKSPRPVNIDSPQVGKDKLIAKPIRKKMVAKKAFGSGHTTNR- 515
DL S+A+ N +V M+ R + + D++ + + ++ + + G R
Sbjct: 542 DLSDSAARLFNSGVVPMEADIRTPENSTMKGALDEVPERSVTDPVMRRSSTSPGSGLIRM 601
Query: 516 KGXXXXXXXXXXXXPAVCLSREVERANQEKFSSTSELETDPPNLSDEATKEMETTLV-AK 574
K P L + N + + P+ +DE + V A
Sbjct: 602 KDKQETELTTKKTAPKKSLGTRGRKKNP--INQKGSIYLSEPSPTDERNVCLNKGKVSAP 659
Query: 575 CGDNSGDGIKTMDDETEAPDEKYEI--EFEKMLNNEKSEGVQSIHKEDTMMKRVPGVGHE 632
NS E +P E+ + K ++ E +E +Q I D H
Sbjct: 660 VTGNSNQ------KEISSPVLNTEVVQDMAKHIDTE-TEALQGIDSVDNKSLAPEEKDHL 712
Query: 633 AHDSMVYGRDGITGK--EVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGN 690
D MV +D + K E +AEV +TV + + + DG + + K
Sbjct: 713 VLDLMV-NQDKLQAKTPEAADAEVEITVLERELNDVPTEDPSDGALQSEVDKNTSKRKRE 771
Query: 691 VSADKETVESWXXXXXXXXXKVGNVFEEALNDEKPEGVELIHKEDAELKRIPGAGH-EAH 749
K +++ KVG + + K E K + L + G +
Sbjct: 772 AGVGKNSLQR-GKKGSSFTAKVG---KSRVKKTKISRKENDIKANGTLMKDGGDNSADGK 827
Query: 750 DSVVCRHDEITGKEGINAQVRTTLSGEMFDLDESNSKRDG---TKCKIN--RAKKRPSGK 804
+++ H+ GK ++ ++GE E+ +K + +++ + K+R
Sbjct: 828 ENLALEHEN--GKVSSGGD-QSLVAGETLTRKEAATKDPSYAAAQLEVDTKKGKRRKQAT 884
Query: 805 AS---LKTLSADKGTVESKKD 822
L+T S K V K+D
Sbjct: 885 VEENRLQTPSVKKAKVSKKED 905
Score = 67 (28.6 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 42/176 (23%), Positives = 77/176 (43%)
Query: 534 LSREVERANQEKFSSTSELETDPPN--LSDEATKE---METTLVAKCG-DNSGDGIKT-- 585
L+R+ E A ++ + ++LE D +AT E ++T V K DG K
Sbjct: 853 LTRK-EAATKDPSYAAAQLEVDTKKGKRRKQATVEENRLQTPSVKKAKVSKKEDGAKANN 911
Query: 586 ---MDDETEAPDEKYEIEFEKMLNNEKSEGVQSIHKEDTMMKRVPGVGHEAHDSMVYGRD 642
D + + K + ++ + S+G QS+ E ++ K+ ++ +M D
Sbjct: 912 TVKKDIWIHSAEVKENVAVDENCGDVSSDGAQSLVVEKSLAKKEAAAKDPSNAAMQLEFD 971
Query: 643 GIT---GKEVMNAEVGMTVSGKRFDLDESTSKMD-GMKSKRKIRPSDKANGNVSAD 694
GKE + E SGK+ S+S+++ G S +K + S+K +G + D
Sbjct: 972 DNKCKHGKEGI-VERSSLQSGKK----GSSSRVEVGKSSVKKTKKSEKGSGTEATD 1022
Score = 49 (22.3 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 860 KVGSSDEVEKENRPVADEGQTSSPGVGKSILKSMKVSMK 898
K G VE+ + +G +S VGKS +K K S K
Sbjct: 976 KHGKEGIVERSSLQSGKKGSSSRVEVGKSSVKKTKKSEK 1014
>UNIPROTKB|Q800K6 [details] [associations]
symbol:topbp1-A "DNA topoisomerase 2-binding protein 1-A"
species:8355 "Xenopus laevis" [GO:0000076 "DNA replication
checkpoint" evidence=IMP] [GO:0000785 "chromatin" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006270 "DNA replication initiation" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0019900 "kinase
binding" evidence=IPI] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IDA]
[GO:0035563 "positive regulation of chromatin binding"
evidence=IMP] [GO:0045860 "positive regulation of protein kinase
activity" evidence=IDA] [GO:0071163 "DNA replication preinitiation
complex assembly" evidence=IMP] [GO:0071165 "GINS complex assembly"
evidence=IMP] [GO:0071168 "protein localization to chromatin"
evidence=IMP] [GO:0005656 "pre-replicative complex" evidence=IMP]
[GO:0006267 "pre-replicative complex assembly" evidence=IMP]
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=IMP] InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006281 GO:GO:0000785
GO:GO:0045860 GO:GO:0003682 GO:GO:0006974 GO:GO:0005815
GO:GO:0007049 GO:GO:0006270 GO:GO:0033138 GO:GO:0000922
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0000076
GO:GO:0071163 GO:GO:0030174 GO:GO:0035563 GO:GO:0071168
GO:GO:0071165 EMBL:AB091779 EMBL:BC170556 EMBL:BC170557
RefSeq:NP_001082568.1 UniGene:Xl.11481 ProteinModelPortal:Q800K6
IntAct:Q800K6 GeneID:398573 KEGG:xla:398573 CTD:11073
Xenbase:XB-GENE-990641 HOVERGEN:HBG067053 KO:K10728
InterPro:IPR026993 PANTHER:PTHR13561:SF6 Uniprot:Q800K6
Length = 1513
Score = 204 (76.9 bits), Expect = 5.7e-17, Sum P(3) = 5.7e-17
Identities = 58/203 (28%), Positives = 98/203 (48%)
Query: 941 QRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSAC 1000
+R ++ +I L G + + + TH + R EK+ A+ A+G+W+L YL AC
Sbjct: 1272 ERIDYSQLIEELGGVVI-EKQCFDPSCTHIVVGHPLRNEKYLASMAAGKWVLHRSYLEAC 1330
Query: 1001 SQAGKFLLEEPYEWHKNG-LSEDGAIN------LEAPRKWRL----LRERTG--HGAFHG 1047
A +F+ EE YEW LS IN EA +WR +++ G GAF G
Sbjct: 1331 RAAKRFIQEEDYEWGSMSILSAVTNINPQQRMLAEAAMRWRKKLQGIKQNMGIAEGAFSG 1390
Query: 1048 MRIIVYGDCIAPPLDTLKRVVKAGDGNILA--TSPPYTRFLNSGVDFAVVSPGMPRVDLW 1105
++I+ D P KR++++G + A +SP + + DF+ + P PRV+
Sbjct: 1391 WKVILNVDQTKEP--GFKRLLQSGGAKVFAGHSSPLFKEASHLFADFSKLKPDEPRVN-- 1446
Query: 1106 VQEFLKHEIPCVVADYLVEFVCK 1128
V E + C+ +Y+ +++ K
Sbjct: 1447 VAEAAAQGVNCLKPEYIADYLMK 1469
Score = 115 (45.5 bits), Expect = 5.7e-17, Sum P(3) = 5.7e-17
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 27 MCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLVN 86
+C+TG DR+++ L L G +++ L N+ THLI + +G+KYE A+K ++ ++
Sbjct: 204 ICVTGLSSLDRKEVQRLTALHGGEYTGQLKMNESTHLIVQEAKGQKYECARKW-NVHCIS 262
Query: 87 HRWLEDCL 94
+W D +
Sbjct: 263 VQWFFDSI 270
Score = 94 (38.1 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 6 ASIMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLV--ANKV--- 60
++ ++ P+ L G V+ ++ + +R+ ++ L L+G++ + V AN
Sbjct: 618 SNALFTPVPFLEGSTPLRECVLSVSQFMGAERDSLVYLAGLLGAKVQEFFVRKANPKKGM 677
Query: 61 ---THLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNY 105
THL+ EG KYE AKK ++ V WL C R E +Y
Sbjct: 678 FASTHLVLKDAEGSKYEAAKKW-NLPAVTMNWLLQCARTGRKADEDSY 724
Score = 75 (31.5 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 22 ANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKI-K 80
A+ + C T ++ RED+ V++MG + L + VTHLI + +KY +A + K
Sbjct: 107 ADVTISC-TSLDKETREDVHHYVQIMGGCVYRDLNVS-VTHLIAGEVGSKKYLVAASLEK 164
Query: 81 SIKLVNHRWLEDCLRVWE 98
I L + W+++ +WE
Sbjct: 165 PILLPS--WVKE---LWE 177
Score = 67 (28.6 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 47/245 (19%), Positives = 95/245 (38%)
Query: 24 SLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIK 83
++V+C++ + + ++ + +G+++ + VTH I + G + +++++ KS+K
Sbjct: 899 NVVICVSKKLIKKQGELNGIAASLGAEY-RWCFDESVTHFI---YHGRQNDMSREYKSVK 954
Query: 84 ------LVNHRWLEDCLRVWELLPEVNYD-----KSGYELXXXXXXXXXXXXXXXXXSLK 132
+V+ WL C + +PE Y K ++ SL+
Sbjct: 955 ERSGIYIVSEHWLFACSEQQKRVPEALYPHTYNPKMSLDISAVQDGSYTASKFSADTSLQ 1014
Query: 133 QFGGRDVNKSPHNLNVGIINAHESPKSTLEG---------QGLLVGSTIPEASSGIDNAT 183
Q ++ +N G + + K+ +G +G L T+ +
Sbjct: 1015 QDENSELQLQQNN-KFGETSDDQVKKAAGDGNPQNPSKDVKGALT-QTLEMRENFQRQLQ 1072
Query: 184 DMLSTPSRVSRSHQI--SGFDNVNITEVNGCHYTGASRDNSHEKTPNSAKVKSDL-VPTS 240
+ +S S V + +GFDN T G T R E S + +DL S
Sbjct: 1073 EFMSATSVVKPRGSVGRAGFDNSPCTP-EGARSTRNGRSRVLEALRQSRQAMTDLNTEPS 1131
Query: 241 KNAEI 245
+N +I
Sbjct: 1132 QNEQI 1136
Score = 53 (23.7 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 29 LTGYQRQDREDIMTLVRLMGS-QFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV-N 86
L G+ + + + L+ G +F++ + VTH+I + + E + K + V
Sbjct: 366 LCGFGGRKLDKLRKLINNGGGVRFNQ--LTGDVTHIIVGETDEELKQFLNKTQHRPYVLT 423
Query: 87 HRWLEDCLRVWELLPEVNYDKSGYE 111
+WL D L PE Y S Y+
Sbjct: 424 VKWLLDSFAKGHLQPEEIYFHSSYQ 448
Score = 39 (18.8 bits), Expect = 5.7e-17, Sum P(3) = 5.7e-17
Identities = 22/83 (26%), Positives = 34/83 (40%)
Query: 350 YKT-PVSETKSSACHSFETGNHLSPGSNGHYTI-ETATPSTA-PNKKPLTPDL-----PS 401
YK P S KS S TG + P S Y + + + ST+ N+ + P
Sbjct: 281 YKIEPASTIKSVPDTSTPTGGNSKPNSRTLYDVSQISNISTSCVNESAFNSAMASRLDPP 340
Query: 402 LKTVTSEALHSEGADRNALETCR 424
T+ + + S A + L+ CR
Sbjct: 341 ADTLENLDISSLQAPDDLLDGCR 363
>UNIPROTKB|Q92547 [details] [associations]
symbol:TOPBP1 "DNA topoisomerase 2-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010212 "response to ionizing radiation"
evidence=IDA] [GO:0016605 "PML body" evidence=IDA] [GO:0005694
"chromosome" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006259 "DNA metabolic process" evidence=TAS] [GO:0008022
"protein C-terminus binding" evidence=TAS] InterPro:IPR001357
Pfam:PF00533 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0016605 GO:GO:0006281 GO:GO:0005815 GO:GO:0010212
GO:GO:0001673 GO:GO:0000794 GO:GO:0008022 GO:GO:0000922
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
Pathway_Interaction_DB:bard1pathway EMBL:AC016255 PDB:3AL3
PDBsum:3AL3 InterPro:IPR016126 SUPFAM:SSF48201 eggNOG:NOG288412
CTD:11073 HOVERGEN:HBG067053 KO:K10728 InterPro:IPR026993
PANTHER:PTHR13561:SF6 EMBL:AB019397 EMBL:D87448 EMBL:AK302584
EMBL:AC083905 IPI:IPI00293921 RefSeq:NP_008958.2 UniGene:Hs.593379
PDB:1WF6 PDB:2XNH PDB:2XNK PDB:3AL2 PDB:3JVE PDB:3OLC PDB:3PD7
PDBsum:1WF6 PDBsum:2XNH PDBsum:2XNK PDBsum:3AL2 PDBsum:3JVE
PDBsum:3OLC PDBsum:3PD7 ProteinModelPortal:Q92547 SMR:Q92547
DIP:DIP-24263N IntAct:Q92547 MINT:MINT-275958 STRING:Q92547
PhosphoSite:Q92547 DMDM:296453012 PaxDb:Q92547 PRIDE:Q92547
Ensembl:ENST00000260810 GeneID:11073 KEGG:hsa:11073 UCSC:uc003eps.3
GeneCards:GC03M133319 H-InvDB:HIX0003693 HGNC:HGNC:17008
HPA:CAB022451 MIM:607760 neXtProt:NX_Q92547 PharmGKB:PA134934073
HOGENOM:HOG000154662 InParanoid:Q92547 OMA:CAQEYKH
OrthoDB:EOG4FXR6Q EvolutionaryTrace:Q92547 GenomeRNAi:11073
NextBio:42094 ArrayExpress:Q92547 Bgee:Q92547 CleanEx:HS_TOPBP1
Genevestigator:Q92547 GermOnline:ENSG00000163781 Uniprot:Q92547
Length = 1522
Score = 166 (63.5 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 51/200 (25%), Positives = 94/200 (47%)
Query: 941 QRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSAC 1000
+R ++ +I L G L + + TH + R EK+ A+ A+G+W+L YL AC
Sbjct: 1279 ERIDYCHLIEKLGG-LVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEAC 1337
Query: 1001 SQAGKFLLEEPYEWHKNGLSED-GAINLEAPR------KWRLL---RERTG--HGAFHGM 1048
AG F+ EE YEW + + + IN++ R +WR R+ +G GAF G
Sbjct: 1338 RTAGHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQESGIVEGAFSGW 1397
Query: 1049 RIIVYGDCIAPPLDTLKRVVKAGDGNILA--TSPPYTRFLNSGVDFAVVSPGMPRVDLWV 1106
++I++ D KR++++G +L + P + + D + P V+ +
Sbjct: 1398 KVILHVDQSREA--GFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKLKPDDSGVN--I 1453
Query: 1107 QEFLKHEIPCVVADYLVEFV 1126
E + C+ +Y+ +++
Sbjct: 1454 AEAAAQNVYCLRTEYIADYL 1473
Score = 107 (42.7 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++C+TG DR+++ L G Q+ L N+ THLI + +G+KYE AK+ ++ V
Sbjct: 204 IICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRW-NVHCV 262
Query: 86 NHRWLEDCL 94
+W D +
Sbjct: 263 TTQWFFDSI 271
Score = 77 (32.2 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
+ C T +++ RE++ V++MG + + L + VTHLI + +KY +A +K L+
Sbjct: 111 ISC-TSLEKEKREEVHKYVQMMGGRVYRDLNVS-VTHLIAGEVGSKKYLVAANLKKPILL 168
Query: 86 NHRWLEDCLRVWE 98
W++ +WE
Sbjct: 169 PS-WIKT---LWE 177
Score = 69 (29.3 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 20/88 (22%), Positives = 43/88 (48%)
Query: 23 NSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSI 82
+ +V+C++ + + ++ + +G+ + VTH I ++G + ++ KS+
Sbjct: 906 HKVVVCVSKKLSKKQSELNGIAASLGADYRWSF-DETVTHFI---YQGRPNDTNREYKSV 961
Query: 83 K-----LVNHRWLEDCLRVWELLPEVNY 105
K +V+ WL DC + + LPE Y
Sbjct: 962 KERGVHIVSEHWLLDCAQECKHLPESLY 989
Score = 69 (29.3 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 26/105 (24%), Positives = 46/105 (43%)
Query: 9 MYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLV----ANK----V 60
++ P+ + G+ V+ + ++E + L L+G+ + V A K
Sbjct: 633 LFTPVPVMTGMTPLEDCVISFSQCAGAEKESLTFLANLLGASVQEYFVRKSNAKKGMFAS 692
Query: 61 THLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNY 105
THLI + G KYE AKK ++ V WL + R + E ++
Sbjct: 693 THLILKERGGSKYEAAKKW-NLPAVTIAWLLETARTGKRADESHF 736
Score = 67 (28.6 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 26/105 (24%), Positives = 47/105 (44%)
Query: 311 EEESIVLPQKRMSNSTGAGSKSQKMSHNAAECNPRSPI-NYKTPVSETKSSACHSFETGN 369
E ++ +L +K S S + S+K H A+ + S N + V E K+S F
Sbjct: 459 ESKAALLKKKNSSFSKKDFAPSEK--HEQADEDLLSQYENGSSTVVEAKTSEARPFNDST 516
Query: 370 HLSP-GSNGHYTIETATPSTAPNKKPLTPDLPSLKTVTSEALHSE 413
H P + H +++ N+ ++ +P + T+T E L S+
Sbjct: 517 HAEPLNDSTHISLQEE------NQSSVSHCVPDVSTITEEGLFSQ 555
Score = 56 (24.8 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 29 LTGYQRQDREDIMTLVRLMGS-QFSKPLVANKVTHLICYKFEGE-KYELAKKIKSIKLVN 86
L G+ + + + L+ G +F++ + VTH+I ++ E K K +V
Sbjct: 366 LCGFSGRKLDKLRRLINSGGGVRFNQ--LNEDVTHVIVGDYDDELKQFWNKSAHRPHVVG 423
Query: 87 HRWLEDCLRVWELLPEVNYDKSGYE 111
+WL +C +L E Y + Y+
Sbjct: 424 AKWLLECFSKGYMLSEEPYIHANYQ 448
Score = 44 (20.5 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 14/50 (28%), Positives = 17/50 (34%)
Query: 847 PRSKTRVITASASKVGSSDEVEKENRPVADEGQTSSPGVGKSILKSMKVS 896
P SK ++ S D E ADE S G S + K S
Sbjct: 458 PESKAALLKKKNSSFSKKDFAPSEKHEQADEDLLSQYENGSSTVVEAKTS 507
Score = 41 (19.5 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 14/75 (18%), Positives = 31/75 (41%)
Query: 532 VCLSREVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGDGIKTMDDETE 591
+C SR + + K L + ++ + AT E+ G N G+ T E
Sbjct: 1009 LCNSRLLSAVSSTKDDEPDPLILEENDVDNMATNNKESAPSNGSGKNDSKGVLTQTLEMR 1068
Query: 592 APDEKYEIEFEKMLN 606
E ++ + +++++
Sbjct: 1069 ---ENFQKQLQEIMS 1080
Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 215 TGASRDNSHEKTPNSAKVKSDLVPT-----SKNAEISYHSGSKFCSLNYSRKT 262
TG D SH NS K + L + N++ + H G++ L RKT
Sbjct: 727 TGKRADESHFLIENSTKEERSLETEITNGINLNSDTAEHPGTR---LQTHRKT 776
>UNIPROTKB|G3X684 [details] [associations]
symbol:TOPBP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0010212 "response
to ionizing radiation" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] InterPro:IPR001357 Pfam:PF00533 GO:GO:0016605
GO:GO:0006974 GO:GO:0010212 GO:GO:0001673 GO:GO:0000794
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GeneTree:ENSGT00700000104481 InterPro:IPR016126 SUPFAM:SSF48201
InterPro:IPR026993 PANTHER:PTHR13561:SF6 OMA:CAQEYKH
EMBL:DAAA02003073 EMBL:DAAA02003074 Ensembl:ENSBTAT00000000686
Uniprot:G3X684
Length = 1524
Score = 171 (65.3 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 54/203 (26%), Positives = 95/203 (46%)
Query: 941 QRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSAC 1000
+R ++ +I L G + + + TH + R EK+ A+ A+G+W+L YL AC
Sbjct: 1281 ERIDYCHLIEKLGGSVI-EKQCFDPSCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEAC 1339
Query: 1001 SQAGKFLLEEPYEWHKNGLSED-GAINLE------APRKWRLL---RERTG--HGAFHGM 1048
AG+F+ EE YEW + + + IN++ A +WR R+ +G GAF G
Sbjct: 1340 RTAGRFMSEEDYEWGSSSILDVLTGINVQQRKLALAAMRWRKKIQQRQESGITEGAFSGW 1399
Query: 1049 RIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGV-----DFAVVSPGMPRVD 1103
++I++ D KR++++G +L P Y+ L DF P V+
Sbjct: 1400 KVILHVDQSRE--SGFKRLLQSGGAKVL---PGYSVSLFKEATHLFSDFNKQKPDDSGVN 1454
Query: 1104 LWVQEFLKHEIPCVVADYLVEFV 1126
+ E + C+ +Y+ +F+
Sbjct: 1455 --IAEAAAQNVYCLKTEYIADFL 1475
Score = 92 (37.4 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFE---GEKYELAKKIKSI 82
++C+TG DR+ + L G Q+ L N+ THLI + + G+KYE AK+ ++
Sbjct: 204 IICVTGLCTLDRKSVQQLTVKHGGQYMGQLKMNECTHLIVQEPKDIIGQKYECAKRW-NV 262
Query: 83 KLVNHRWLED 92
V +W D
Sbjct: 263 HCVTTQWFFD 272
Score = 75 (31.5 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
V C T ++ RE++ V++MG + + L + VTHLI + +KY +A +K L+
Sbjct: 111 VSC-TSLEKDRREEVHKYVQMMGGRVYRDLNVS-VTHLIAGEVGSKKYLVAANLKKPILL 168
Query: 86 NHRWLEDCLRVWE 98
W++ +WE
Sbjct: 169 PS-WIKT---LWE 177
Score = 69 (29.3 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 19/87 (21%), Positives = 44/87 (50%)
Query: 24 SLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIK 83
++V+C++ + + ++ + +G+ + VTH I ++G + ++ KS+K
Sbjct: 909 NVVVCVSKKLSKKQSELNGIAASLGADYRWSF-DETVTHFI---YQGRPNDTNREYKSVK 964
Query: 84 -----LVNHRWLEDCLRVWELLPEVNY 105
+V+ WL +C + ++ LPE Y
Sbjct: 965 ERGVHIVSEHWLLECAQEYKHLPESLY 991
Score = 55 (24.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 61 THLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRV 96
THL+ + G KYE AKK ++ V WL + R+
Sbjct: 695 THLVLKEPGGSKYEAAKKW-NLPAVTIAWLLESARL 729
Score = 55 (24.4 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 29 LTGYQRQDREDIMTLVRLMGS-QFSKPLVANKVTHLICYKFEGE-KYELAKKIKSIKLVN 86
L G+ + + + L+ G +F++ + VTH+I + E K K +V
Sbjct: 369 LCGFNGRKLDKLRRLINSGGGVRFNQ--LNEDVTHVIVGDDDDELKQFWDKSAHRPHVVG 426
Query: 87 HRWLEDCLRVWELLPEVNYDKSGYE 111
+WL +C +LPE Y Y+
Sbjct: 427 AKWLLECFSKGYMLPEEPYIHVNYQ 451
Score = 48 (22.0 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 847 PRSKTRVITASASKVGSSDEVEKENRPVADEG-----QTSSPGV 885
P SKT ++ + SD V +E ADE QT++P V
Sbjct: 461 PESKTALLKRKNNGFSKSDFVPEEKHEQADEDLLSQYQTNNPTV 504
Score = 45 (20.9 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 20/95 (21%), Positives = 35/95 (36%)
Query: 320 KRMSNSTGAGSKSQKMSHNAAECNPRSPINYKTP-VSETKSSACHSFETGNHLSPGSNGH 378
KR +N + H A+ + S P V E S H+ P ++
Sbjct: 469 KRKNNGFSKSDFVPEEKHEQADEDLLSQYQTNNPTVVEVAKSEVGLCSDSTHVEPRNDST 528
Query: 379 YTIETATPSTAPNKKPLTPDLPSLKTVTSEALHSE 413
+ S ++ ++ LP + T+T E L S+
Sbjct: 529 HI------SLQEHQSSISHCLPDVSTITEEGLFSQ 557
Score = 39 (18.8 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 10 YRPLK--DLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVA-NKVTHLICY 66
+ PL+ D++ + +N + G R D + +T M F K L T ++
Sbjct: 1030 HMPLEENDIDNMTTSNKELTTSNGNGRNDSKGALTQTLEMRENFQKQLQEIMSATSIV-- 1087
Query: 67 KFEGEKYELAK 77
K +G++ L++
Sbjct: 1088 KPQGQRTSLSR 1098
Score = 39 (18.8 bits), Expect = 9.8e-07, Sum P(3) = 9.8e-07
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 64 ICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNY 105
IC F G+ ++ KK+ ++V + + C+ +P +
Sbjct: 59 ICDPFSGDAFDHLKKL-GCRIVGPQVVIFCMHHQRCVPRAEH 99
Score = 37 (18.1 bits), Expect = 5.9e-11, Sum P(3) = 5.9e-11
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 225 KTPNSAKVKSDLVPTSKNAE 244
K N+ KSD VP K+ +
Sbjct: 469 KRKNNGFSKSDFVPEEKHEQ 488
>UNIPROTKB|Q9BQI6 [details] [associations]
symbol:ANKRD32 "Ankyrin repeat domain-containing protein
32" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] InterPro:IPR002110
Pfam:PF00023 PROSITE:PS50088 SMART:SM00248 InterPro:IPR001357
GO:GO:0005634 GO:GO:0005813 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AC008534
EMBL:AC025766 EMBL:BC054885 EMBL:BC070332 EMBL:BC107571
EMBL:AL050298 EMBL:AL136560 EMBL:CR533539 IPI:IPI00419518
PIR:T08704 RefSeq:NP_115666.2 UniGene:Hs.657315
ProteinModelPortal:Q9BQI6 SMR:Q9BQI6 STRING:Q9BQI6
PhosphoSite:Q9BQI6 DMDM:193806371 PaxDb:Q9BQI6 PRIDE:Q9BQI6
DNASU:84250 Ensembl:ENST00000265140 GeneID:84250 KEGG:hsa:84250
UCSC:uc003kkr.4 CTD:84250 GeneCards:GC05P094039 HGNC:HGNC:25408
HPA:HPA040793 neXtProt:NX_Q9BQI6 PharmGKB:PA134911523
eggNOG:NOG255440 HOGENOM:HOG000033961 HOVERGEN:HBG103143
InParanoid:Q9BQI6 OMA:CPTCMKG OrthoDB:EOG4Z62PS GenomeRNAi:84250
NextBio:73744 ArrayExpress:Q9BQI6 Bgee:Q9BQI6 CleanEx:HS_ANKRD32
Genevestigator:Q9BQI6 GermOnline:ENSG00000133302 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 Uniprot:Q9BQI6
Length = 1058
Score = 203 (76.5 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 64/220 (29%), Positives = 108/220 (49%)
Query: 935 LSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQ-ATHFIAPEIRRTEKFFAAAASGRWILK 993
++G +++ KE +++ L C Y+ TH IA + ++EKF AA A+G+WIL
Sbjct: 12 MTGFKMEEKE--ALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWILT 69
Query: 994 TDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLE---APRKWRLLRERTGH-GAFHGMR 1049
DY+ +++G++L E YEW + +D + + AP++WR +RTG GAFH +
Sbjct: 70 KDYIIHSAKSGRWLDETTYEWGYK-IEKDSRYSPQMQSAPKRWREELKRTGAPGAFHRWK 128
Query: 1050 IIVYGDCIAPPLDTLKRVVKAGDGN-ILATSPPYTRFLNSGVDFAVVSPGMPRVDLWVQE 1108
+++ D+L RV++AG N IL S P SG+ + S + +
Sbjct: 129 VVLLVRTDKRS-DSLIRVLEAGKANVILPKSSP------SGITHVIASNARIKAEKEKDN 181
Query: 1109 FLKHEIPCVVADYLVEFVCKPGYSLERHVQYNTHAWAEKS 1148
F + P YL +F+ + + Q N+ W E S
Sbjct: 182 F---KAPFYPIQYLGDFLLEKEIQNDEDSQTNS-VWTEHS 217
>UNIPROTKB|D6RED9 [details] [associations]
symbol:ANKRD32 "Ankyrin repeat domain-containing protein
32" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] InterPro:IPR001357
Pfam:PF00533 GO:GO:0005634 GO:GO:0005813 EMBL:AC008534
EMBL:AC025766 HGNC:HGNC:25408 SMART:SM00292 SUPFAM:SSF52113
HOGENOM:HOG000200317 IPI:IPI00967130 ProteinModelPortal:D6RED9
SMR:D6RED9 Ensembl:ENST00000504099 ArrayExpress:D6RED9 Bgee:D6RED9
Uniprot:D6RED9
Length = 131
Score = 172 (65.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 40/123 (32%), Positives = 71/123 (57%)
Query: 935 LSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQ-ATHFIAPEIRRTEKFFAAAASGRWILK 993
++G +++ KE +++ L C Y+ TH IA + ++EKF AA A+G+WIL
Sbjct: 12 MTGFKMEEKE--ALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWILT 69
Query: 994 TDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLE---APRKWRLLRERTGH-GAFHGMR 1049
DY+ +++G++L E YEW + +D + + AP++WR +RTG GAFH +
Sbjct: 70 KDYIIHSAKSGRWLDETTYEWGYK-IEKDSRYSPQMQSAPKRWREELKRTGAPGAFHRWK 128
Query: 1050 IIV 1052
+++
Sbjct: 129 VVL 131
>MGI|MGI:2145448 [details] [associations]
symbol:Ankrd32 "ankyrin repeat domain 32" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR002110 Pfam:PF00023 PROSITE:PS50088 SMART:SM00248
InterPro:IPR001357 MGI:MGI:2145448 GO:GO:0005634 GO:GO:0005813
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 CTD:84250 eggNOG:NOG255440 HOVERGEN:HBG103143
OMA:CPTCMKG OrthoDB:EOG4Z62PS SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 EMBL:AC122418 EMBL:AC161266 EMBL:BC009101
EMBL:BC024900 EMBL:BC083095 EMBL:BC100362 EMBL:AK047775
EMBL:AK050168 IPI:IPI00153788 IPI:IPI00969786 RefSeq:NP_598832.3
UniGene:Mm.209730 ProteinModelPortal:Q8R3P9 SMR:Q8R3P9
PhosphoSite:Q8R3P9 PRIDE:Q8R3P9 Ensembl:ENSMUST00000151524
Ensembl:ENSMUST00000159462 GeneID:105377 KEGG:mmu:105377
UCSC:uc007rgs.2 UCSC:uc007rgv.2 GeneTree:ENSGT00550000074487
HOGENOM:HOG000200317 InParanoid:Q8R3P9 NextBio:357644 Bgee:Q8R3P9
CleanEx:MM_ANKRD32 Genevestigator:Q8R3P9
GermOnline:ENSMUSG00000021597 Uniprot:Q8R3P9
Length = 1054
Score = 199 (75.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 61/218 (27%), Positives = 108/218 (49%)
Query: 935 LSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQ-ATHFIAPEIRRTEKFFAAAASGRWILK 993
++G +++ KE +++ L C Y+ TH IA + ++EKF AA A+G+W+L
Sbjct: 12 MTGFKMEEKE--ALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWVLT 69
Query: 994 TDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLE---APRKWRLLRERTGH-GAFHGMR 1049
DY+ +++G++L E YEW + +D + + AP++WR +RTG GAFH +
Sbjct: 70 KDYIIHSAKSGRWLDETTYEWGYK-IEKDSHYSPQMQSAPKRWREELKRTGAPGAFHRWK 128
Query: 1050 IIVYGDCIAPPLDTLKRVVKAGDGN-ILATSPPYTRFLNSGVDFAVVSPGMPRVDLWVQE 1108
+++ D+L RV++AG N IL + P SG+ + S + +
Sbjct: 129 VVLLVRADKRS-DSLVRVLEAGKANVILPKNSP------SGITHVIASNARISAEREQEN 181
Query: 1109 FLKHEIPCVVADYLVEFVCKPGYSLERHVQYNTHAWAE 1146
F + P YL +F+ + + H Q + AW +
Sbjct: 182 F---KAPFYPIQYLGDFLLEKEIQNDEHSQISP-AWTK 215
>MGI|MGI:1920018 [details] [associations]
symbol:Topbp1 "topoisomerase (DNA) II binding protein 1"
species:10090 "Mus musculus" [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005694 "chromosome" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007131
"reciprocal meiotic recombination" evidence=ISA] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0016605 "PML
body" evidence=ISO] InterPro:IPR001357 MGI:MGI:1920018 Pfam:PF00533
GO:GO:0005737 GO:GO:0003677 GO:GO:0016605 GO:GO:0006281
GO:GO:0005815 GO:GO:0010212 GO:GO:0001673 GO:GO:0000794
GO:GO:0000922 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0007131 GeneTree:ENSGT00700000104481 eggNOG:NOG288412
CTD:11073 HOVERGEN:HBG067053 KO:K10728 InterPro:IPR026993
PANTHER:PTHR13561:SF6 OMA:CAQEYKH OrthoDB:EOG4FXR6Q EMBL:AK129104
EMBL:BC006707 EMBL:BC007170 EMBL:BC026608 EMBL:BC049797
EMBL:BC062111 EMBL:AK084654 EMBL:AK085031 IPI:IPI00453855
RefSeq:NP_795953.2 UniGene:Mm.259893 ProteinModelPortal:Q6ZQF0
SMR:Q6ZQF0 IntAct:Q6ZQF0 STRING:Q6ZQF0 PhosphoSite:Q6ZQF0
PaxDb:Q6ZQF0 PRIDE:Q6ZQF0 Ensembl:ENSMUST00000035164 GeneID:235559
KEGG:mmu:235559 UCSC:uc009rgl.1 InParanoid:Q6ZQF0 NextBio:382747
Bgee:Q6ZQF0 CleanEx:MM_TOPBP1 Genevestigator:Q6ZQF0
GermOnline:ENSMUSG00000032555 Uniprot:Q6ZQF0
Length = 1515
Score = 167 (63.8 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 49/173 (28%), Positives = 84/173 (48%)
Query: 968 THFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSE---DGA 1024
TH + R EK+ A+ A+G+W+L YL AC AG+F+ EE YEW + + + D
Sbjct: 1301 THMVVGYPLRNEKYLASMAAGKWVLHRSYLDACKTAGRFVQEEDYEWGSSSILDALPDVT 1360
Query: 1025 INLE----APRKWRLL---RERTG--HGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNI 1075
+ + A +WR + +G GAF G + I+ D P KR+++AG +
Sbjct: 1361 EHQQKLALAAMRWRKRIQQSQESGIVEGAFSGWKAILRVD--RPREAGFKRLLQAGGAKV 1418
Query: 1076 LATSP-PYTR-FLNSGVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFV 1126
L+ P P + + DF + P RV ++ E + C+ +Y+ +++
Sbjct: 1419 LSGHPEPLLKDATHLFCDFNKLKPDDCRV--FIAEATAQNMVCLKTEYIADYL 1469
Score = 100 (40.3 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++C+TG R+ + L G Q+ L N+ THLI + +G+KYE A++ ++ V
Sbjct: 204 IICVTGLNGIHRKTVQQLTAKHGGQYMGQLKMNECTHLIVQEPKGQKYECARRW-NVHCV 262
Query: 86 NHRWLEDCL 94
+W D +
Sbjct: 263 TLQWFHDSI 271
Score = 78 (32.5 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 27/105 (25%), Positives = 49/105 (46%)
Query: 9 MYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQ----FSKPLVANK----V 60
++ P+ ++G+ V+ + +R+ ++ L +G+ F + A K
Sbjct: 636 LFTPVSVMSGVTPLEDCVISFSQCVGAERDSLVFLANHLGASVQEFFVRKANAKKGMLAS 695
Query: 61 THLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNY 105
THLI + G KYE AKK S+ VN WL + R+ + E ++
Sbjct: 696 THLIVKEPTGSKYEAAKKW-SLPAVNISWLLETARIGKRADENHF 739
Score = 75 (31.5 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
V C T + RE++ V++MG + + L + VTHLI + +KY +A +K L+
Sbjct: 111 VSC-TSLDKDKREEVHKYVQMMGGRVYRDLNVS-VTHLIAGEVGSKKYLVAANLKKPILL 168
Query: 86 NHRWLEDCLRVWELLPEVNYDK 107
W++ +WE E K
Sbjct: 169 PS-WIKT---LWEKSQEKKITK 186
Score = 71 (30.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 19/86 (22%), Positives = 44/86 (51%)
Query: 23 NSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICY---KFEGEKYELAKKI 79
+S+V+C++ + + ++ + +G+++ VTH I +Y+ AK+
Sbjct: 908 DSVVVCVSKKLSKKQSELNGVAASLGAEYRWSF-DETVTHFIYQGRANDSNREYKSAKE- 965
Query: 80 KSIKLVNHRWLEDCLRVWELLPEVNY 105
+ + +V+ WL +C + ++ LPE Y
Sbjct: 966 RGVHIVSEHWLLECAQEYKHLPESLY 991
Score = 66 (28.3 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 23/105 (21%), Positives = 51/105 (48%)
Query: 9 MYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGS-QFSKPLVANKVTHLICYK 67
M++ +DL + G + +C G+ + + + L+ G +F++ + VTH+I
Sbjct: 350 MFQAPEDL--LDGCR-IYLC--GFSGRKLDKLRRLINSGGGVRFNQ--LNEDVTHVIVGD 402
Query: 68 FEGEKYEL-AKKIKSIKLVNHRWLEDCLRVWELLPEVNYDKSGYE 111
++ + + +K +V +WL +C +LPE +Y + Y+
Sbjct: 403 YDDDVRQFWSKSSHRPHVVGAKWLLECFTKGYILPEESYIHTNYQ 447
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 373 PGSNGHYTIETATPSTAPNKKPL 395
P + +E P +P++KP+
Sbjct: 1169 PTQHSELQVEIKMPDDSPSRKPV 1191
>RGD|1562949 [details] [associations]
symbol:Topbp1 "topoisomerase (DNA) II binding protein 1"
species:10116 "Rattus norvegicus" [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0001673 "male germ cell nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0016605 "PML
body" evidence=ISO] InterPro:IPR001357 Pfam:PF00533 RGD:1562949
GO:GO:0016605 GO:GO:0006974 GO:GO:0010212 GO:GO:0001673
GO:GO:0000794 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GeneTree:ENSGT00700000104481 InterPro:IPR026993
PANTHER:PTHR13561:SF6 OrthoDB:EOG4FXR6Q IPI:IPI00370853
ProteinModelPortal:D3ZRG0 Ensembl:ENSRNOT00000013265
UCSC:RGD:1562949 Uniprot:D3ZRG0
Length = 1516
Score = 170 (64.9 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 50/173 (28%), Positives = 86/173 (49%)
Query: 968 THFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSE---DGA 1024
TH + R EK+ A+ A+G+W+L YL AC AG+F+ EE YEW + + + D
Sbjct: 1302 THMVVGYPLRNEKYLASMAAGKWVLHRSYLDACRTAGRFVQEEDYEWGSSSILDALPDVT 1361
Query: 1025 INLE----APRKWR--LLRER-TG--HGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNI 1075
+ + A +WR + + R +G GAF G ++I+ D P KR+++AG +
Sbjct: 1362 EHQQKLALAAMRWRKRIQQSRESGIAEGAFSGWKVILRVD--RPREAGFKRLLQAGGAKV 1419
Query: 1076 LATSP-P-YTRFLNSGVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFV 1126
L P P + + DF + P RV ++ E + C+ +Y+ +++
Sbjct: 1420 LPGHPEPLFKDATHLFCDFNKLKPDDCRV--FIAEATAQNMVCLKTEYIADYL 1470
Score = 100 (40.3 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++C+TG R+ + L G Q+ L N+ THLI + +G+KYE A++ ++ V
Sbjct: 204 IICVTGLNGIHRKTVQQLTAKHGGQYMGQLKMNECTHLIVQEPKGQKYECARRW-NVHCV 262
Query: 86 NHRWLEDCL 94
+W D +
Sbjct: 263 TLQWFHDSI 271
Score = 74 (31.1 bits), Expect = 5.5e-09, Sum P(4) = 5.5e-09
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
+ C T + RE++ V++MG + + L + VTHLI + +KY +A +K L+
Sbjct: 111 ISC-TSLDKDKREEVHKYVQMMGGRVYRDLNVS-VTHLIAGEVGSKKYLVAANLKKPILL 168
Query: 86 NHRWLEDCLRVWELLPEVNYDK 107
W++ +WE E K
Sbjct: 169 P-AWIKT---LWEKSQEKKITK 186
Score = 73 (30.8 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 27/105 (25%), Positives = 49/105 (46%)
Query: 9 MYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLV----ANK----V 60
++ P+ ++G+ V+ + +R+ ++ L +G+ + V A K
Sbjct: 636 LFTPVSVMSGMTPLEDCVISFSQCVGAERDSLVFLANHLGASVQEFFVRKSNAKKGMLAS 695
Query: 61 THLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNY 105
THLI + G KYE AKK S+ VN WL + R+ + E ++
Sbjct: 696 THLIVKEPTGSKYEAAKKW-SLPAVNISWLLETARMGKRADENHF 739
Score = 69 (29.3 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 24/105 (22%), Positives = 51/105 (48%)
Query: 9 MYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGS-QFSKPLVANKVTHLICYK 67
M++ +DL + G + +C G+ + + + L+ G +F++ + VTH+I
Sbjct: 350 MFQAPEDL--LDGCR-IYLC--GFSGRKLDKLRRLINSGGGVRFNQ--LNEDVTHVIMGD 402
Query: 68 FEGEKYEL-AKKIKSIKLVNHRWLEDCLRVWELLPEVNYDKSGYE 111
+E + + +K +V +WL +C +LPE +Y + Y+
Sbjct: 403 YEDDVRQFWSKSSHRPHVVGAKWLLECFSKGYILPEESYIHANYQ 447
Score = 65 (27.9 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 18/86 (20%), Positives = 43/86 (50%)
Query: 23 NSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICY---KFEGEKYELAKKI 79
+ +V+C++ + + ++ + +G+++ VTH I +Y+ AK+
Sbjct: 908 DKVVVCVSKRLSKKQSELNGVAASLGAEYRWSF-DETVTHYIYQGRANDSNREYKSAKE- 965
Query: 80 KSIKLVNHRWLEDCLRVWELLPEVNY 105
+ + +V+ WL +C + ++ LPE Y
Sbjct: 966 RGVHVVSEHWLLECAQEYKHLPESLY 991
Score = 42 (19.8 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 151 INAHESPKSTLEGQGLLVGSTIPE 174
I+ E KS++ LL GST+PE
Sbjct: 530 ISVQEENKSSVS-HCLLDGSTVPE 552
Score = 40 (19.1 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 173 PEASSGIDNATDMLSTPSRVSRSHQISGFDN 203
P+ S +NAT+ L T SR S +G D+
Sbjct: 1028 PDHLSVEENATETLGTHSRESALLNGNGRDD 1058
Score = 37 (18.1 bits), Expect = 3.0e-11, Sum P(4) = 3.0e-11
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 559 LSDEATKEMETTLVAKCGDNSG--------DGIKTMDDETEAPDEKYEIEFEKMLNNEKS 610
LS+ + + TT +A N+G G +ET P +K + K L+ ++S
Sbjct: 865 LSEVIVRNL-TTALANSSRNTGCLSASPQLKGAHLEKEETPKPLDKVVVCVSKRLSKKQS 923
Query: 611 E 611
E
Sbjct: 924 E 924
>RGD|1304857 [details] [associations]
symbol:Ankrd32 "ankyrin repeat domain 32" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] InterPro:IPR002110 Pfam:PF00023
PROSITE:PS50088 SMART:SM00248 InterPro:IPR001357 RGD:1304857
GO:GO:0005634 GO:GO:0005813 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 CTD:84250
OrthoDB:EOG4Z62PS SMART:SM00292 SUPFAM:SSF52113
GeneTree:ENSGT00550000074487 EMBL:CH473955 IPI:IPI00779807
RefSeq:NP_001099870.1 UniGene:Rn.99144 Ensembl:ENSRNOT00000018457
GeneID:294601 KEGG:rno:294601 UCSC:RGD:1304857 NextBio:638323
Uniprot:D3ZVR6
Length = 1059
Score = 192 (72.6 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 58/197 (29%), Positives = 100/197 (50%)
Query: 935 LSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQ-ATHFIAPEIRRTEKFFAAAASGRWILK 993
++G +++ KE +++ L C Y+ TH IA + ++EKF AA A+G+W+L
Sbjct: 12 MTGFKMEEKE--ALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWVLT 69
Query: 994 TDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLE---APRKWRLLRERTGH-GAFHGMR 1049
DY+ +++G++L E YEW + +D + + AP++WR +RTG GAFH +
Sbjct: 70 KDYIIHSAKSGRWLDETTYEWGYK-IEKDSHYSPQMQSAPKRWREELKRTGAPGAFHRWK 128
Query: 1050 IIVYGDCIAPPLDTLKRVVKAGDGN-ILATSPPYTRFLNSGVDFAVVSPGMPRVDLWVQE 1108
+++ D+L RV++AG N IL S P SG+ + S + +
Sbjct: 129 VVLLVRADKRS-DSLVRVLEAGKANVILPRSSP------SGITHVIASNARISAEREQEN 181
Query: 1109 FLKHEIPC-VVADYLVE 1124
F P + D+L+E
Sbjct: 182 FKAPFYPIQYLGDFLLE 198
>FB|FBgn0002878 [details] [associations]
symbol:mus101 "mutagen-sensitive 101" species:7227
"Drosophila melanogaster" [GO:0007067 "mitosis" evidence=TAS]
[GO:0048477 "oogenesis" evidence=TAS] [GO:0007095 "mitotic G2 DNA
damage checkpoint" evidence=IGI;IMP] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IMP] InterPro:IPR001357
Pfam:PF00533 GO:GO:0007095 GO:GO:0007067 GO:GO:0048477
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0033314
FlyBase:FBgn0002878 EMBL:BT010007 ProteinModelPortal:Q7YU37
SMR:Q7YU37 STRING:Q7YU37 PRIDE:Q7YU37 InParanoid:Q7YU37
ArrayExpress:Q7YU37 Bgee:Q7YU37 Uniprot:Q7YU37
Length = 1425
Score = 149 (57.5 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 42/151 (27%), Positives = 66/151 (43%)
Query: 941 QRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSAC 1000
+R E I L G++C + + TH + R EK A A+G+WIL Y+
Sbjct: 1220 KRAELIARITQLGGKVCENLVNYDDSCTHLLCERPNRGEKMLACIAAGKWILNIQYIEQS 1279
Query: 1001 SQAGKFLLEEPYEW-HKNGLSEDGAINLEAP-----RKWRLLRERTGHGAFHGMRIIV-Y 1053
G FL E YEW + ++ E P +WR G GAF R+I+
Sbjct: 1280 HARGDFLDETLYEWGNPKAINLPTLAPEEEPIAAAVHRWRTELSACGGGAFSDHRVILSM 1339
Query: 1054 GDCIAPPLDTLKRVVKAGDGNILATSPPYTR 1084
+ P+ + V++AG IL + P+++
Sbjct: 1340 NERSGAPI---RNVLRAGGACILEPTTPFSK 1367
Score = 96 (38.9 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 32 YQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLVNHRWLE 91
Y +R+ I L+G+ +K + + L+C EG KYE A K + +V WL
Sbjct: 718 YAGLERDFINATAELLGASVNKTFIKKEKPLLVCPSAEGSKYEGAIKW-NYPVVTSDWLV 776
Query: 92 DCLRVWELLPEVNY 105
C R + LP V Y
Sbjct: 777 QCARTGQKLPFVGY 790
Score = 74 (31.1 bits), Expect = 4.1e-08, Sum P(5) = 4.1e-08
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 25 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 84
L + TG Q +E++ L+ MG + + ++ THLI + KYE A + + +
Sbjct: 125 LQVSATGITPQKKEELSRLINWMGGIYFQSF-GHRTTHLISNTIKSSKYEQAT-LNGVPV 182
Query: 85 VNHRWLEDCLRVWE 98
++ W++ VW+
Sbjct: 183 MHVDWVQ---YVWD 193
Score = 54 (24.1 bits), Expect = 3.3e-06, Sum P(5) = 3.3e-06
Identities = 25/89 (28%), Positives = 42/89 (47%)
Query: 21 GANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICY--KFEGEKYELAKK 78
GAN + C +G ++ +M LV G + + + V +I K + EKY+ A +
Sbjct: 220 GAN--ITC-SGLDVARKDQVMRLVNDNGGIYHRAFRSQVVDIVITEQTKTDTEKYKAAIR 276
Query: 79 IKSIKLVNHRWLED-CLRVWELLPEVNYD 106
K L+ W+ D C R + L P +Y+
Sbjct: 277 YKKDVLLPE-WIFDSCNRGYAL-PTKDYE 303
Score = 50 (22.7 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 23/92 (25%), Positives = 38/92 (41%)
Query: 382 ETATPSTAPNKKPLTPDLPS----LKTVTSEALHSEGADRNALETCRGSKESTVASKTDN 437
E+A P AP+ + PD+ LK S + + N ++ C G E ++
Sbjct: 1112 ESAVPVLAPDVPTVAPDVKQITDYLKNCESRGNSLKRSHDNDMD-C-GESEVQYVQPFES 1169
Query: 438 EDFGMGSVHLDGEAEDAQNLHQDLEGSSAKNR 469
E F +G+ ED + E ++AK R
Sbjct: 1170 EGFALGT-------EDMVDWRDPAEFNAAKRR 1194
Score = 48 (22.0 bits), Expect = 4.1e-08, Sum P(5) = 4.1e-08
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 547 SSTSELETDPPNLSDEAT--KEMETTL-VAKCG-DNSGDGIKTMDDETEAPDEKYEIEFE 602
++ S +E PP SD T +E ++T+ K + S + D T APD K ++
Sbjct: 1077 NTQSPIEAAPPRRSDGPTLSEEGQSTINFDKISFEESAVPVLAPDVPTVAPDVKQITDYL 1136
Query: 603 KMLNNEKSEGVQSIHKED 620
K + + ++ H D
Sbjct: 1137 KNCES-RGNSLKRSHDND 1153
Score = 46 (21.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 79 IKSIKLVNHRWLEDCLRVWELLPEVNYDK 107
+K+ +V +LE C++ +LLP Y K
Sbjct: 669 VKARHVVTELFLESCMKKNQLLPIEYYHK 697
Score = 45 (20.9 bits), Expect = 4.1e-08, Sum P(5) = 4.1e-08
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 187 STPSRVSRSHQISGFDNVNITEVNGCHYTGASR 219
STP++ +R G D ++++++ + SR
Sbjct: 311 STPTKTTRPGAAPGADQTHLSDLSRISFVSGSR 343
Score = 43 (20.2 bits), Expect = 4.1e-08, Sum P(5) = 4.1e-08
Identities = 47/210 (22%), Positives = 74/210 (35%)
Query: 307 ELCHEEESIVLPQKRMSNSTGAGSKSQKMSHNAAECNPRSPINYKTPVSETKSSACHSFE 366
EL H + +PQ R + SK S N + P PI K E E
Sbjct: 480 ELVHR---VSMPQNREPDVASPASKRTLRSMNHSFKQPTLPIKKKLFDQEPDPVQEQEHE 536
Query: 367 TGNH--LSPGSNGHYTIETATPSTAPNKKPLTP----DLPSLKTVTSEALHSEGADRNAL 420
+H L S + P+ +P D+ +V + +EG L
Sbjct: 537 EPDHTLLDQYSQDQGAVAQLPPADVSLLQPAASSTQMDIRQRVSVANPKPPAEGLQLPDL 596
Query: 421 ETCRGSKESTVASKTDNEDFGMG-SVHLDGEAEDAQNLHQDLEGSSAKNRFLVMDKSPRP 479
ST++ D D+ G SV++ E + + +Q L A LV
Sbjct: 597 SA------STLSIDFDKLDYFAGVSVYVHRECFNEEFFNQMLTECEAAQGLLVPSSFSDE 650
Query: 480 VN--IDSPQVGKDKLIAKPIRKKMVAKKAF 507
V+ I S +V D + P++ + V + F
Sbjct: 651 VDFAIVSFEVAFD-VKQLPVKARHVVTELF 679
Score = 42 (19.8 bits), Expect = 9.7e-08, Sum P(4) = 9.7e-08
Identities = 22/103 (21%), Positives = 37/103 (35%)
Query: 376 NGHYTIETATPSTAPNKKPLTPDLPSLKTVTSEALHSEGADRNALETCRGSKESTVASKT 435
N Y + T P K TP + A + +D + + GS+ T
Sbjct: 292 NRGYALPTKDYEVRPGKTSSTPTKTTRPGAAPGADQTHLSDLSRISFVSGSRRMCSDLST 351
Query: 436 DNEDFGMGSVHLDGEAEDAQNLHQDLEGSSAKNRFLVMDKSPR 478
NE + SV G + A+ L + S + ++ + PR
Sbjct: 352 VNES--VSSV---GSSSPAKQLLKQATSSGRNYQQVLAEIEPR 389
Score = 39 (18.8 bits), Expect = 3.0e-07, Sum P(5) = 3.0e-07
Identities = 14/46 (30%), Positives = 18/46 (39%)
Query: 725 PEGVELIHKEDAELKRIPGAG--HEAHDSVVCRHDEITGKEGINAQ 768
PE L +K +EL IPG H +S T + AQ
Sbjct: 851 PELTPLRNKRVSELAGIPGGSALHRGSNSTSSPDSPCTPLSQVGAQ 896
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 178 (67.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 133/735 (18%), Positives = 277/735 (37%)
Query: 170 STIPEASSGIDNATDMLSTPSRVSRSHQISGFDNVNIT---EV--NGCHYTGASR--DNS 222
S + +S I ++++++S+ S+VS S + + + I+ EV + T +S +S
Sbjct: 140 SEVLSSSEIISSSSEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSS 199
Query: 223 HEKTPNSAKVKSDLVPTSKNAEISYHSG-SKFCSLNYSRKTPRKSILTMSSGKVDNDVLN 281
E +S++V S S ++E+S S S ++ S + S + SS +V +
Sbjct: 200 SEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSE 259
Query: 282 IISSKVE-NAETRTVTACGEIPKRGGELCHEEESIVLPQKRMSNSTGAGSKSQKMSHNAA 340
++SS E ++ + V++ E+ E+ E V +S+S+ S SQ +S +
Sbjct: 260 VVSSSSEVSSSSEVVSSSSEVSS-SSEVSSSSE--VSSSSEVSSSSEVSSSSQVISSSEV 316
Query: 341 ECNPRSPINYKTPVSETK--SSACHSFETGNHLSPGSNGHYTIETATPSTAPNKKPLTPD 398
+ ++ + VS + SS+ + + +S S + E ++ S + +
Sbjct: 317 VSSSSEVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSS 376
Query: 399 LPSLKTVTSEALHSEGADRNALETCRGSKESTVASKTDNEDFGMGSVHLDGEAEDAQNLH 458
+ + +SE + S ++ E S E + +S+ + S + +E + +
Sbjct: 377 SSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSS-S 435
Query: 459 QDLEGSSAKNRFLVMDKSPRPVNIDSPQVGKDKLIAKPIRKKMVAKKAFGSGHTTNRKGX 518
Q + S V+ S V+ S V ++ ++ + S T++ +
Sbjct: 436 QVISSSE------VVSSSSE-VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIV 488
Query: 519 XXXXXXXXXXXPAVCLSREVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDN 578
V S EV ++ E SS+SE+ + S E + E + ++ +
Sbjct: 489 SSSSEVSSSSSEVVSSSSEVS-SSSEVVSSSSEVSS-----SSEVSSSSEVSSSSQVISS 542
Query: 579 SGDGIKTMDDETEAPDEKYEIEFEKMLNNEKSEGVQSIHKEDTMMKRVPGVGHEAHDSMV 638
S + + +E E+ + SE V S E + V + S V
Sbjct: 543 S----EIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSS-SSEVSSSSEVSSSSEVSSSSQV 597
Query: 639 YGRDGITGKEVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGN--VSADKE 696
I+ EV+++ + S S + S ++ S + + + V++ E
Sbjct: 598 -----ISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSE 652
Query: 697 TVESWXXXXXXXXXKVGNVFEEALNDEKPEGVELIHKEDAELKRIPGAGHEAHDSVVCRH 756
V S V + E + + E V E + + + + S V
Sbjct: 653 IVSSSSEVSSSSSEVVSSSSEVSSSSE----VVSSSSEVSSSSEVSSSSEVSSSSQVISS 708
Query: 757 DEI--TGKEGINAQVRTTLSGEMFDLDE-SNSKRDGTKCKINRAKKRPSGKASLKTLSAD 813
E+ + E +++ + S E+ E S+S + +++ + + S + + + S+
Sbjct: 709 SEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSS 768
Query: 814 KGTVESKKDVVXXXXXXXXXXXXXXXXXXXVLLPRSKTRVITASASKVGSSDEVEKENRP 873
S + V V S + IT+S+ + S+ EV +
Sbjct: 769 SEVTSSSE--VSSSSQATSSSSEIISSSSKV----SSSSEITSSSECISSTSEVNSSSSE 822
Query: 874 VADEGQTSSPGVGKS 888
V SS V S
Sbjct: 823 VVSSSSASSEVVSSS 837
Score = 150 (57.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 119/734 (16%), Positives = 275/734 (37%)
Query: 170 STIPEASSGIDNATDMLSTPSRVSRSHQISGFDNVNIT-EVNGCHYTGASRDNSHEKTPN 228
ST+ +SS + +++ ++ S ++ S +IS V+ + EV +S S E +
Sbjct: 102 STVSSSSSEVISSSSEEASSSEITSSSEISSSSEVSSSSEVLSSSEIISS---SSEVVSS 158
Query: 229 SAKVKSDLVPTSKNAEISYHSGSKFCSLNYSRKTPRKSILTMSSGKVDN--DVLN---II 283
S+KV S TS ++EI S S+ S + S+ T +++ SS V + +V + ++
Sbjct: 159 SSKVSSSSEATSSSSEI-ISSSSEVVSSS-SQVTSSSEVVSSSSEVVSSSSEVSSSSEVV 216
Query: 284 SSKVENAETRTVTACGEIPKRGGELCHEEESIVLPQKRMSNSTGAGSKSQKMSHNAAECN 343
SS E + + V++ E+ ++ E + + S+S+ S S ++S ++ +
Sbjct: 217 SSSSEVSSSSEVSSSSEVSS-SSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVS 275
Query: 344 PRSPINYKTPVSETKSSACHSFETGNHLSPGSNGHYTIETATPSTAPNKKPLTPDLPSLK 403
S ++ + VS + S S E + S+ + S++ + ++ S
Sbjct: 276 SSSEVSSSSEVSSS-SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSS 334
Query: 404 TVTS--EALHSEGADRNALETCRGSKESTVASKTDNEDFGMGSVHLDGEAEDAQNLHQDL 461
V+S E + S ++ E S+ S+ + T + + S + + + + ++
Sbjct: 335 EVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEV 394
Query: 462 EGSSAKNRFLVMDKSPRPVNIDSPQVGKDKLIAKPIRKKMVAKKAFGSGHTTNRKGXXXX 521
SS S V+ S +V ++ + + S +
Sbjct: 395 SSSSEVVSSSSEVSSSSEVS-SSSEVSSSSEVSSSSEVSS-SSQVISSSEVVSSSSEVSS 452
Query: 522 XXXXXXXXPAVCLSREVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGD 581
V S EV +++ SS+S++ + +S + ++ V
Sbjct: 453 SSEVVSSSSEVSSSSEVSSSSE--VSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS 510
Query: 582 GIKTMDDETEAPDEKYEIEFEKMLNNEKSEGVQSIHKEDTMMKRVPGVGHEAHDSMVYGR 641
+ + +E E ++E S Q I + ++ V + + +
Sbjct: 511 SSEVVSSSSEVSSSS-----EVSSSSEVSSSSQVISSSE-IVSSSSEVSSSSSEVVSSSS 564
Query: 642 DGITGKEVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGNVSADKETVESW 701
+ + EV+++ ++ S + E +S + S + S + + S + E
Sbjct: 565 EVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVS 624
Query: 702 XXXXXXXXXKVGNVFEEALNDEKPEGVELIHKED---AELKRIPGAGHEAHDS--VVCRH 756
+V + E + + + E++ + + + E S VV
Sbjct: 625 SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS 684
Query: 757 DEITGKEGINAQVRTTLSGEMFDLDE---SNSKRDGTKCKINRAKK-RPSGKASLKTLSA 812
E++ +++ + S ++ E S+S+ + +++ + + S + S + +
Sbjct: 685 SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVS 744
Query: 813 DKGTVESKKDVVXXXXXXXXXXXXXXXXXXXVLLPRSK----TRVITASASKVGSSDEVE 868
V S +V + S+ + I +S+SKV SS E+
Sbjct: 745 SSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEIT 804
Query: 869 KENRPVADEGQTSS 882
+ ++ + +S
Sbjct: 805 SSSECISSTSEVNS 818
Score = 144 (55.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 127/780 (16%), Positives = 290/780 (37%)
Query: 156 SPKSTLEGQGLLVGST-IPEASSGIDNATDMLSTPSRV-SRSHQISGFDNVNITEVNGCH 213
S ++T ++ S+ + +SS + ++++++S+ S V S S ++S V ++ +
Sbjct: 165 SSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEV-VS--SSSE 221
Query: 214 YTGASRDNSHEKTPNSAKVKSDLVPTSKNAEISYHSG---SKFCSLNYSRKTPRKSILTM 270
+ +S +S + +S++V S S ++E+S S S ++ S + S
Sbjct: 222 VSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVS 281
Query: 271 SSGKVDNDVLNIISSKVENAETRTVTACGEIPKRGGELCHEEESIVLPQKRMSNSTGAGS 330
SS +V + + +SS E + + V++ ++ E+ +V +S+S+ S
Sbjct: 282 SSSEVSSS--SEVSSSSEVSSSSEVSSSSQVIS-SSEVVSSSSEVVSSSSEVSSSSEVSS 338
Query: 331 KSQKMSHNAAECNPRSPINYKTPVSETK--SSACHSFETGNHLSPGSNGHYTIETATPST 388
S+ +S +++E + S ++ + VS + +S+ + + +S S+ ++ S+
Sbjct: 339 SSEVVS-SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVS-SSSSEVVSSSSEVSS 396
Query: 389 APNKKPLTPDLPSLKTVTSEALHSEGADRNALETCRGSKE----STVASKTDNEDFGMGS 444
+ + ++ S V+S + S ++ ++ S + S V S +
Sbjct: 397 SSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEV 456
Query: 445 VHLDGEAEDAQNLHQDLEGSSAKNRFLVMD--KSPRPVNIDSPQVGKDKLIAKPIRKKMV 502
V E + + E SS+ + S V+ S +V + +
Sbjct: 457 VSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVS 516
Query: 503 AKKAFGSGHTTNRKGXXXXXXXXXXXXPAVCLSREVERANQEKFSSTSELETDPPNLSDE 562
+ S + V S EV ++ E SS+SE+ + +S
Sbjct: 517 SSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS 576
Query: 563 ATKEMETTLVAKCGDNSGDGIKTMDDETEAPDEKYEIEFEKMLNNEKSEGVQ-SIHKEDT 621
+ + + + +S + + + + E E ++E S + S E +
Sbjct: 577 SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVS 636
Query: 622 MMKRVPGVGHEAHDSMVYGRDGITGKEVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKI 681
V S + ++EV ++ S + E S + S ++
Sbjct: 637 SSSEVSSSSQVTSSSEIVSSSSEVSSS--SSEV-VSSSSEVSSSSEVVSSSSEVSSSSEV 693
Query: 682 RPSDKANGN--VSADKETVESWXXXXXXXXXKVGNVFEEALNDEKPEGVELIHKED-AEL 738
S + + + V + E V S +V + E + + E E+ + +
Sbjct: 694 SSSSEVSSSSQVISSSEVVSS-SSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSS 752
Query: 739 KRIPGAGHEAHDSVVCRHDEITGKEGINAQVR-TTLSGEMFD----LDESNSKRDGTKCK 793
+ + E S E+T +++ + T+ S E+ + S+ ++C
Sbjct: 753 SEVTSSSSEIISS--SSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECI 810
Query: 794 INRAKKRPSGKASLKTLSADKGTVESKKDVVXXXXXXXXXXXXXXXXXXXVLLPRSKTRV 853
+ ++ S + + SA V S + + + S + V
Sbjct: 811 SSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSSTECI--SSSSEV 868
Query: 854 ITASASKVGSSDEVEKENRPVADEGQTSSPGVGKSILKSM--KVSMKNKIGGNVNSNSIP 911
I++S SS+ V ++ + +SS + S S + K+ +++S S P
Sbjct: 869 ISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEFVSKSSEHSSLSSESCP 928
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 178 (67.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 133/735 (18%), Positives = 277/735 (37%)
Query: 170 STIPEASSGIDNATDMLSTPSRVSRSHQISGFDNVNIT---EV--NGCHYTGASR--DNS 222
S + +S I ++++++S+ S+VS S + + + I+ EV + T +S +S
Sbjct: 140 SEVLSSSEIISSSSEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSS 199
Query: 223 HEKTPNSAKVKSDLVPTSKNAEISYHSG-SKFCSLNYSRKTPRKSILTMSSGKVDNDVLN 281
E +S++V S S ++E+S S S ++ S + S + SS +V +
Sbjct: 200 SEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSE 259
Query: 282 IISSKVE-NAETRTVTACGEIPKRGGELCHEEESIVLPQKRMSNSTGAGSKSQKMSHNAA 340
++SS E ++ + V++ E+ E+ E V +S+S+ S SQ +S +
Sbjct: 260 VVSSSSEVSSSSEVVSSSSEVSS-SSEVSSSSE--VSSSSEVSSSSEVSSSSQVISSSEV 316
Query: 341 ECNPRSPINYKTPVSETK--SSACHSFETGNHLSPGSNGHYTIETATPSTAPNKKPLTPD 398
+ ++ + VS + SS+ + + +S S + E ++ S + +
Sbjct: 317 VSSSSEVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSS 376
Query: 399 LPSLKTVTSEALHSEGADRNALETCRGSKESTVASKTDNEDFGMGSVHLDGEAEDAQNLH 458
+ + +SE + S ++ E S E + +S+ + S + +E + +
Sbjct: 377 SSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSS-S 435
Query: 459 QDLEGSSAKNRFLVMDKSPRPVNIDSPQVGKDKLIAKPIRKKMVAKKAFGSGHTTNRKGX 518
Q + S V+ S V+ S V ++ ++ + S T++ +
Sbjct: 436 QVISSSE------VVSSSSE-VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIV 488
Query: 519 XXXXXXXXXXXPAVCLSREVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDN 578
V S EV ++ E SS+SE+ + S E + E + ++ +
Sbjct: 489 SSSSEVSSSSSEVVSSSSEVS-SSSEVVSSSSEVSS-----SSEVSSSSEVSSSSQVISS 542
Query: 579 SGDGIKTMDDETEAPDEKYEIEFEKMLNNEKSEGVQSIHKEDTMMKRVPGVGHEAHDSMV 638
S + + +E E+ + SE V S E + V + S V
Sbjct: 543 S----EIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSS-SSEVSSSSEVSSSSEVSSSSQV 597
Query: 639 YGRDGITGKEVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGN--VSADKE 696
I+ EV+++ + S S + S ++ S + + + V++ E
Sbjct: 598 -----ISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSE 652
Query: 697 TVESWXXXXXXXXXKVGNVFEEALNDEKPEGVELIHKEDAELKRIPGAGHEAHDSVVCRH 756
V S V + E + + E V E + + + + S V
Sbjct: 653 IVSSSSEVSSSSSEVVSSSSEVSSSSE----VVSSSSEVSSSSEVSSSSEVSSSSQVISS 708
Query: 757 DEI--TGKEGINAQVRTTLSGEMFDLDE-SNSKRDGTKCKINRAKKRPSGKASLKTLSAD 813
E+ + E +++ + S E+ E S+S + +++ + + S + + + S+
Sbjct: 709 SEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSS 768
Query: 814 KGTVESKKDVVXXXXXXXXXXXXXXXXXXXVLLPRSKTRVITASASKVGSSDEVEKENRP 873
S + V V S + IT+S+ + S+ EV +
Sbjct: 769 SEVTSSSE--VSSSSQATSSSSEIISSSSKV----SSSSEITSSSECISSTSEVNSSSSE 822
Query: 874 VADEGQTSSPGVGKS 888
V SS V S
Sbjct: 823 VVSSSSASSEVVSSS 837
Score = 150 (57.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 119/734 (16%), Positives = 275/734 (37%)
Query: 170 STIPEASSGIDNATDMLSTPSRVSRSHQISGFDNVNIT-EVNGCHYTGASRDNSHEKTPN 228
ST+ +SS + +++ ++ S ++ S +IS V+ + EV +S S E +
Sbjct: 102 STVSSSSSEVISSSSEEASSSEITSSSEISSSSEVSSSSEVLSSSEIISS---SSEVVSS 158
Query: 229 SAKVKSDLVPTSKNAEISYHSGSKFCSLNYSRKTPRKSILTMSSGKVDN--DVLN---II 283
S+KV S TS ++EI S S+ S + S+ T +++ SS V + +V + ++
Sbjct: 159 SSKVSSSSEATSSSSEI-ISSSSEVVSSS-SQVTSSSEVVSSSSEVVSSSSEVSSSSEVV 216
Query: 284 SSKVENAETRTVTACGEIPKRGGELCHEEESIVLPQKRMSNSTGAGSKSQKMSHNAAECN 343
SS E + + V++ E+ ++ E + + S+S+ S S ++S ++ +
Sbjct: 217 SSSSEVSSSSEVSSSSEVSS-SSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVS 275
Query: 344 PRSPINYKTPVSETKSSACHSFETGNHLSPGSNGHYTIETATPSTAPNKKPLTPDLPSLK 403
S ++ + VS + S S E + S+ + S++ + ++ S
Sbjct: 276 SSSEVSSSSEVSSS-SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSS 334
Query: 404 TVTS--EALHSEGADRNALETCRGSKESTVASKTDNEDFGMGSVHLDGEAEDAQNLHQDL 461
V+S E + S ++ E S+ S+ + T + + S + + + + ++
Sbjct: 335 EVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEV 394
Query: 462 EGSSAKNRFLVMDKSPRPVNIDSPQVGKDKLIAKPIRKKMVAKKAFGSGHTTNRKGXXXX 521
SS S V+ S +V ++ + + S +
Sbjct: 395 SSSSEVVSSSSEVSSSSEVS-SSSEVSSSSEVSSSSEVSS-SSQVISSSEVVSSSSEVSS 452
Query: 522 XXXXXXXXPAVCLSREVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGD 581
V S EV +++ SS+S++ + +S + ++ V
Sbjct: 453 SSEVVSSSSEVSSSSEVSSSSE--VSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS 510
Query: 582 GIKTMDDETEAPDEKYEIEFEKMLNNEKSEGVQSIHKEDTMMKRVPGVGHEAHDSMVYGR 641
+ + +E E ++E S Q I + ++ V + + +
Sbjct: 511 SSEVVSSSSEVSSSS-----EVSSSSEVSSSSQVISSSE-IVSSSSEVSSSSSEVVSSSS 564
Query: 642 DGITGKEVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGNVSADKETVESW 701
+ + EV+++ ++ S + E +S + S + S + + S + E
Sbjct: 565 EVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVS 624
Query: 702 XXXXXXXXXKVGNVFEEALNDEKPEGVELIHKED---AELKRIPGAGHEAHDS--VVCRH 756
+V + E + + + E++ + + + E S VV
Sbjct: 625 SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS 684
Query: 757 DEITGKEGINAQVRTTLSGEMFDLDE---SNSKRDGTKCKINRAKK-RPSGKASLKTLSA 812
E++ +++ + S ++ E S+S+ + +++ + + S + S + +
Sbjct: 685 SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVS 744
Query: 813 DKGTVESKKDVVXXXXXXXXXXXXXXXXXXXVLLPRSK----TRVITASASKVGSSDEVE 868
V S +V + S+ + I +S+SKV SS E+
Sbjct: 745 SSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEIT 804
Query: 869 KENRPVADEGQTSS 882
+ ++ + +S
Sbjct: 805 SSSECISSTSEVNS 818
Score = 144 (55.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 127/780 (16%), Positives = 290/780 (37%)
Query: 156 SPKSTLEGQGLLVGST-IPEASSGIDNATDMLSTPSRV-SRSHQISGFDNVNITEVNGCH 213
S ++T ++ S+ + +SS + ++++++S+ S V S S ++S V ++ +
Sbjct: 165 SSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEV-VS--SSSE 221
Query: 214 YTGASRDNSHEKTPNSAKVKSDLVPTSKNAEISYHSG---SKFCSLNYSRKTPRKSILTM 270
+ +S +S + +S++V S S ++E+S S S ++ S + S
Sbjct: 222 VSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVS 281
Query: 271 SSGKVDNDVLNIISSKVENAETRTVTACGEIPKRGGELCHEEESIVLPQKRMSNSTGAGS 330
SS +V + + +SS E + + V++ ++ E+ +V +S+S+ S
Sbjct: 282 SSSEVSSS--SEVSSSSEVSSSSEVSSSSQVIS-SSEVVSSSSEVVSSSSEVSSSSEVSS 338
Query: 331 KSQKMSHNAAECNPRSPINYKTPVSETK--SSACHSFETGNHLSPGSNGHYTIETATPST 388
S+ +S +++E + S ++ + VS + +S+ + + +S S+ ++ S+
Sbjct: 339 SSEVVS-SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVS-SSSSEVVSSSSEVSS 396
Query: 389 APNKKPLTPDLPSLKTVTSEALHSEGADRNALETCRGSKE----STVASKTDNEDFGMGS 444
+ + ++ S V+S + S ++ ++ S + S V S +
Sbjct: 397 SSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEV 456
Query: 445 VHLDGEAEDAQNLHQDLEGSSAKNRFLVMD--KSPRPVNIDSPQVGKDKLIAKPIRKKMV 502
V E + + E SS+ + S V+ S +V + +
Sbjct: 457 VSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVS 516
Query: 503 AKKAFGSGHTTNRKGXXXXXXXXXXXXPAVCLSREVERANQEKFSSTSELETDPPNLSDE 562
+ S + V S EV ++ E SS+SE+ + +S
Sbjct: 517 SSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS 576
Query: 563 ATKEMETTLVAKCGDNSGDGIKTMDDETEAPDEKYEIEFEKMLNNEKSEGVQ-SIHKEDT 621
+ + + + +S + + + + E E ++E S + S E +
Sbjct: 577 SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVS 636
Query: 622 MMKRVPGVGHEAHDSMVYGRDGITGKEVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKI 681
V S + ++EV ++ S + E S + S ++
Sbjct: 637 SSSEVSSSSQVTSSSEIVSSSSEVSSS--SSEV-VSSSSEVSSSSEVVSSSSEVSSSSEV 693
Query: 682 RPSDKANGN--VSADKETVESWXXXXXXXXXKVGNVFEEALNDEKPEGVELIHKED-AEL 738
S + + + V + E V S +V + E + + E E+ + +
Sbjct: 694 SSSSEVSSSSQVISSSEVVSS-SSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSS 752
Query: 739 KRIPGAGHEAHDSVVCRHDEITGKEGINAQVR-TTLSGEMFD----LDESNSKRDGTKCK 793
+ + E S E+T +++ + T+ S E+ + S+ ++C
Sbjct: 753 SEVTSSSSEIISS--SSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECI 810
Query: 794 INRAKKRPSGKASLKTLSADKGTVESKKDVVXXXXXXXXXXXXXXXXXXXVLLPRSKTRV 853
+ ++ S + + SA V S + + + S + V
Sbjct: 811 SSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSSTECI--SSSSEV 868
Query: 854 ITASASKVGSSDEVEKENRPVADEGQTSSPGVGKSILKSM--KVSMKNKIGGNVNSNSIP 911
I++S SS+ V ++ + +SS + S S + K+ +++S S P
Sbjct: 869 ISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEFVSKSSEHSSLSSESCP 928
>UNIPROTKB|F1MM85 [details] [associations]
symbol:ANKRD32 "Ankyrin repeat domain-containing protein
32" species:9913 "Bos taurus" [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002110 Pfam:PF00023 PROSITE:PS50088 SMART:SM00248
InterPro:IPR001357 GO:GO:0005634 GO:GO:0005813 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
OMA:CPTCMKG SUPFAM:SSF52113 GeneTree:ENSGT00550000074487
EMBL:DAAA02021298 EMBL:DAAA02021299 EMBL:DAAA02021300
EMBL:DAAA02021301 IPI:IPI00867044 Ensembl:ENSBTAT00000008026
Uniprot:F1MM85
Length = 1050
Score = 171 (65.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 61/223 (27%), Positives = 102/223 (45%)
Query: 938 HRLQRKEFQVVIRHLKGRL-----CRDSHQWSYQ-ATHFIAPEIRRTEKFFAAAASGRWI 991
H +Q F+V + G+L C Y+ TH IA + ++EKF AA A+G W
Sbjct: 8 HIIQMTGFKVEEKEALGKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGNWF 67
Query: 992 LKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLE---APRKWRLLRERTGH-GAFHG 1047
+ +Y S G++L E YEW + +D + + AP++WR +RTG GAFH
Sbjct: 68 TEKEY-KPHSNCGRWLDETTYEWGYK-IEKDSHYSPQMQSAPKRWREELKRTGAPGAFHK 125
Query: 1048 MRIIVYGDCIAPPLDTLKRVVKAGDGN-ILATSPPYTRFLNSGVDFAVVSPGMPRVDLWV 1106
++++ D+L RV++AG N IL + P +G+ + S + +
Sbjct: 126 WKVVLLVRADKRS-DSLVRVLEAGKANVILPKNSP------TGITHVIASNARIKAEQEK 178
Query: 1107 QEFLKHEIPC-VVADYLVEFVCKPGYSLERHVQYNTHAWAEKS 1148
+F P + D+L+E + + + H+ EKS
Sbjct: 179 DDFKAPFYPIQYLEDFLLEKEIHNDEDSQTNSTWKNHSSQEKS 221
>TAIR|locus:2033691 [details] [associations]
symbol:AT1G67180 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048451 "petal formation" evidence=RCA] [GO:0048453 "sepal
formation" evidence=RCA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00097
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
HSSP:P28990 EMBL:AC004146 IPI:IPI00547741 PIR:G96695
RefSeq:NP_176889.1 UniGene:At.50009 ProteinModelPortal:Q9ZW89
SMR:Q9ZW89 PRIDE:Q9ZW89 EnsemblPlants:AT1G67180.1 GeneID:843038
KEGG:ath:AT1G67180 TAIR:At1g67180 eggNOG:NOG311812
HOGENOM:HOG000077557 InParanoid:Q9ZW89 OMA:ICWTEFS PhylomeDB:Q9ZW89
ProtClustDB:CLSN2681961 Genevestigator:Q9ZW89 Uniprot:Q9ZW89
Length = 453
Score = 169 (64.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 33/90 (36%), Positives = 58/90 (64%)
Query: 24 SLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIK 83
++V ++GY DR ++ L+ G+ + + + +THL+C+KFEG+KY+LAKK ++
Sbjct: 3 NVVATVSGYHGSDRFKLIKLISHSGASYVGAM-SRSITHLVCWKFEGKKYDLAKKFGTV- 60
Query: 84 LVNHRWLEDCLRVWELLPEVNYD-KSGYEL 112
+VNHRW+E+C++ + E Y SG E+
Sbjct: 61 VVNHRWVEECVKEGRRVSETPYMFDSGEEV 90
Score = 42 (19.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 479 PVNIDSPQVGKDKLIAKPIRKKMVAKKAFGSGHTTNRKG 517
P+ I+ P V ++ + K + K + S NR G
Sbjct: 92 PLMIELPAVSEEAKVTKKVNKASETFDKYFSNGGENRSG 130
>UNIPROTKB|Q6ZW49 [details] [associations]
symbol:PAXIP1 "PAX-interacting protein 1" species:9606
"Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0043542 "endothelial cell migration"
evidence=IEA] [GO:0060612 "adipose tissue development"
evidence=IEA] [GO:0060717 "chorion development" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010212 "response to
ionizing radiation" evidence=IDA] [GO:0030330 "DNA damage response,
signal transduction by p53 class mediator" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000416 "positive
regulation of histone H3-K36 methylation" evidence=ISS] [GO:0031398
"positive regulation of protein ubiquitination" evidence=ISS]
[GO:0035066 "positive regulation of histone acetylation"
evidence=ISS] [GO:0045830 "positive regulation of isotype
switching" evidence=ISS] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=ISS] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=ISS;IMP] [GO:0035097 "histone methyltransferase
complex" evidence=IDA] [GO:0051568 "histone H3-K4 methylation"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001357 Pfam:PF00533 GO:GO:0006281 GO:GO:0060612
GO:GO:0006351 GO:GO:0010212 GO:GO:0006310 GO:GO:0035066
GO:GO:0001570 GO:GO:0031398 GO:GO:0016363 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330
eggNOG:NOG310206 GO:GO:0051571 GO:GO:0043542 GO:GO:0035097
GO:GO:0060261 PDB:3SQD PDBsum:3SQD KO:K14972 CTD:22976
HOVERGEN:HBG061191 EMBL:AK123044 EMBL:AK123600 EMBL:AK307417
EMBL:BX538201 EMBL:BX640616 EMBL:AC093726 EMBL:U80735 EMBL:BC008328
EMBL:BC033781 IPI:IPI00182798 IPI:IPI00479772 IPI:IPI00854696
IPI:IPI00894296 IPI:IPI00973545 RefSeq:NP_031375.3
UniGene:Hs.443881 ProteinModelPortal:Q6ZW49 SMR:Q6ZW49
DIP:DIP-41786N IntAct:Q6ZW49 MINT:MINT-276076 STRING:Q6ZW49
PhosphoSite:Q6ZW49 DMDM:74723057 PRIDE:Q6ZW49
Ensembl:ENST00000397192 Ensembl:ENST00000404141 GeneID:22976
KEGG:hsa:22976 UCSC:uc003wlr.1 UCSC:uc022aqf.1 UCSC:uc022aqh.1
GeneCards:GC07M154735 H-InvDB:HIX0007243 HGNC:HGNC:8624
HPA:HPA006694 MIM:608254 neXtProt:NX_Q6ZW49 PharmGKB:PA32964
OMA:DIQQINR ChiTaRS:PAXIP1 GenomeRNAi:22976 NextBio:43785
ArrayExpress:Q6ZW49 Bgee:Q6ZW49 CleanEx:HS_PAXIP1
Genevestigator:Q6ZW49 GO:GO:0060717 GO:GO:0000416 GO:GO:0045830
Uniprot:Q6ZW49
Length = 1069
Score = 112 (44.5 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 25 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 84
+ CL+ +DR + LV G L K THLI + +GEKYE A K SIK+
Sbjct: 102 ITACLSQVSSEDRSALWALVTFYGGDCQLTL-NKKCTHLIVPEPKGEKYECALKRASIKI 160
Query: 85 VNHRWLEDCL 94
V W+ DC+
Sbjct: 161 VTPDWVLDCV 170
Score = 108 (43.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++ +TG+ DR+D+ + L G++++ L + T LIC + G KYE AK+ + I V
Sbjct: 710 IISVTGFVDSDRDDLKLMAYLAGAKYTGYLCRSN-TVLICKEPTGLKYEKAKEWR-IPCV 767
Query: 86 NHRWLEDCLRV-WELLPEVNYDK 107
N +WL D L +E L ++ Y +
Sbjct: 768 NAQWLGDILLGNFEALRQIQYSR 790
Score = 99 (39.9 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 31/121 (25%), Positives = 54/121 (44%)
Query: 966 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAI 1025
+ TH IA ++ RT KF A + + I+ ++L C + KF+ E+ Y +
Sbjct: 899 KCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFIDEQNYILRDAEAEVLFSF 958
Query: 1026 NLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRF 1085
+LE K + F+ I G C P L T+K +V+ G +L+ P + +
Sbjct: 959 SLEESLKRAHVSPLFKAKYFY----ITPGIC--PSLSTMKAIVECAGGKVLSKQPSFRKL 1012
Query: 1086 L 1086
+
Sbjct: 1013 M 1013
Score = 54 (24.1 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 16/62 (25%), Positives = 23/62 (37%)
Query: 537 EVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGDGIKTMDDETEAPDEK 596
EVE Q+ + S E P S E + + K G DD +++ EK
Sbjct: 200 EVENEEQDSQNEGSTDEKSSPASSQEGSPSGDQQFSPKSNTEKSKGELMFDDSSDSSPEK 259
Query: 597 YE 598
E
Sbjct: 260 QE 261
Score = 39 (18.8 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 311 EEESIVLPQKRMSNSTGAGSKSQKMSH-NAAECNPRSPINYKTPVSET-KSSACHSFETG 368
EEE + + +S GS +K S ++ E +P + +P S T KS F+
Sbjct: 197 EEEEV---ENEEQDSQNEGSTDEKSSPASSQEGSPSGDQQF-SPKSNTEKSKGELMFDDS 252
Query: 369 NHLSP 373
+ SP
Sbjct: 253 SDSSP 257
Score = 37 (18.1 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 865 DEVEKENRPVADEGQT---SSP 883
+EVE E + +EG T SSP
Sbjct: 199 EEVENEEQDSQNEGSTDEKSSP 220
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 164 (62.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 1170 DTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRS 1229
+ D C+ CG SDR + +L+C GC G H++C DPPL+ VP ++WFCP CT
Sbjct: 182 EEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVPVDEWFCPECTVP 235
Query: 1230 RINPS 1234
++P+
Sbjct: 236 GVDPT 240
Score = 51 (23.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 556 PPNL-SDEATKEMETTLVAKCGDNSGDGIKTMDDETEAPDEK---YEIEFEKMLNNEKSE 611
PP + S E + E + + GD+ D DD+T+ + + E + E +E SE
Sbjct: 19 PPRVGSSELASDAEESSNGQSGDSEDDTGSEQDDDTDGEETEGLSEEEDPEDRSGSEDSE 78
Query: 612 -GVQ 614
GV+
Sbjct: 79 DGVE 82
Score = 42 (19.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 535 SREVERANQEKFSSTSELETDPPNLS----DEATKEMETTLVAKCGDNSGDGIKTMDDET 590
S + + + E+ SE E DP + S E EM T + G + DD+
Sbjct: 48 SEQDDDTDGEETEGLSE-EEDPEDRSGSEDSEDGVEMATAAIETQGKLEASSVPNSDDDA 106
Query: 591 EA 592
E+
Sbjct: 107 ES 108
Score = 39 (18.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 411 HSEGADR----NALETCRGSKESTVASKTDNEDFGMGSVH---LDGEAEDAQNLHQDLEG 463
HS G D + E ++ES+ D+ED GS DGE + + +D E
Sbjct: 12 HSPGPDGPPRVGSSELASDAEESSNGQSGDSED-DTGSEQDDDTDGEETEGLSEEEDPED 70
Query: 464 SS 465
S
Sbjct: 71 RS 72
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 157 (60.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 1170 DTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRS 1229
+ D C+ CG SDR + +L+C GC G H++C +PPL+ VP ++WFCP CT S
Sbjct: 179 EEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLEPPLQEVPVDEWFCPECTAS 232
>RGD|1307547 [details] [associations]
symbol:Paxip1 "PAX interacting (with transcription-activation
domain) protein 1" species:10116 "Rattus norvegicus" [GO:0000416
"positive regulation of histone H3-K36 methylation" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0030330 "DNA damage response, signal transduction
by p53 class mediator" evidence=ISO] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=ISO] [GO:0035066
"positive regulation of histone acetylation" evidence=ISO]
[GO:0035097 "histone methyltransferase complex" evidence=ISO]
[GO:0043542 "endothelial cell migration" evidence=ISO] [GO:0045830
"positive regulation of isotype switching" evidence=ISO]
[GO:0051568 "histone H3-K4 methylation" evidence=ISO] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISO]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=ISO] [GO:0060612 "adipose
tissue development" evidence=ISO] [GO:0060717 "chorion development"
evidence=ISO] InterPro:IPR001357 Pfam:PF00533 RGD:1307547
GO:GO:0060612 GO:GO:0010212 GO:GO:0035066 GO:GO:0001570
GO:GO:0031398 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0051568 GO:GO:0030330 GO:GO:0051571 GO:GO:0043542
GO:GO:0035097 GO:GO:0060261 GO:GO:0060717 GO:GO:0000416
GO:GO:0045830 IPI:IPI00949383 Ensembl:ENSRNOT00000066753
ArrayExpress:F1LVY0 Uniprot:F1LVY0
Length = 994
Score = 113 (44.8 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 30/81 (37%), Positives = 39/81 (48%)
Query: 25 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 84
L CL+ +DR + LV G L K THLI + +GEKYE A K SIK+
Sbjct: 40 LTACLSQVSSEDRSALWALVTFHGGSCQLNL-NKKCTHLIVPEPKGEKYERAVKRTSIKI 98
Query: 85 VNHRWLEDCLRVWELLPEVNY 105
V W+ DC+ E +Y
Sbjct: 99 VTPDWVLDCVSEKRRKDEASY 119
Score = 110 (43.8 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++ +TG+ DR+D+ + L G++++ L + T LIC + G KYE AK+ + I V
Sbjct: 636 IISVTGFVDNDRDDLKLMAYLAGAKYTGYLCRSN-TVLICKEPSGLKYEKAKEWR-IPCV 693
Query: 86 NHRWLEDCLRV-WELLPEVNYDK 107
N +WL D L +E L +V Y +
Sbjct: 694 NAQWLGDILLGNFEALRQVQYSR 716
Score = 97 (39.2 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 32/121 (26%), Positives = 53/121 (43%)
Query: 966 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAI 1025
+ TH IA ++ RT KF A + + I+ D+L C + F+ E+ Y +
Sbjct: 824 KCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQMFIDEQNYILRDAEAEVLFSF 883
Query: 1026 NLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRF 1085
+LE K + F+ I G C P L T+K +V+ G +LA P + +
Sbjct: 884 SLEESLKRAHVSPLFKTKYFY----ITPGIC--PSLATMKAIVECAGGKVLAKQPSFRKL 937
Query: 1086 L 1086
+
Sbjct: 938 M 938
Score = 37 (18.1 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 10/62 (16%), Positives = 24/62 (38%)
Query: 310 HEEESIVLPQKRMSNSTGAGSKSQKMSHNAAECNPRSPINYKTPVSETKSSACHSFETGN 369
H+ + L Q +++ + Q+ HN + + + + ++ A H +T
Sbjct: 430 HQLQQQQLQQHQLAQLQQQQQQQQQQQHNLLQQQQQQQLQRLHQQQQMQNQAAHLSQTSQ 489
Query: 370 HL 371
L
Sbjct: 490 AL 491
>ZFIN|ZDB-GENE-041010-214 [details] [associations]
symbol:paxip1 "PAX interacting (with
transcription-activation domain) protein 1" species:7955 "Danio
rerio" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] InterPro:IPR001357 Pfam:PF00533
ZFIN:ZDB-GENE-041010-214 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00600000084454 EMBL:CR855328
IPI:IPI00489284 Ensembl:ENSDART00000144672 ArrayExpress:F1Q5Z1
Bgee:F1Q5Z1 Uniprot:F1Q5Z1
Length = 1122
Score = 105 (42.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++ +TG+ DR+D+ + L G++++ L + T LIC + G KYE AK+ + I V
Sbjct: 764 IISVTGFVDSDRDDLKLMAYLAGARYTGYLCRSN-TVLICKEPSGLKYEKAKEWR-IPCV 821
Query: 86 NHRWLEDCLRV-WELLPEVNYDK 107
N +WL D L +E L ++ + K
Sbjct: 822 NAQWLCDILLGNFEALRQIQHSK 844
Score = 102 (41.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 940 LQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSA 999
LQ +++ + L G + DS Q + TH +A ++ RT KF A + + I+ ++L
Sbjct: 930 LQAQQYIKKLYDLGGEVA-DSTQ---KCTHLVANKVTRTVKFLTAISVVKHIVTPEWLEE 985
Query: 1000 CSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGA--FHGMRI-IVYGDC 1056
++ KF+ E+ Y + +LE K H A F G I G C
Sbjct: 986 SWKSQKFVDEQSYMLRDAEAEVLFSFSLEESLK-------RAHAAPLFKGKYFYITPGIC 1038
Query: 1057 IAPPLDTLKRVVKAGDGNILATSPPYTRFL 1086
P L T+K +V++ G +L+ P Y + +
Sbjct: 1039 --PSLSTMKLIVESAAGKVLSKQPSYRKIM 1066
>UNIPROTKB|J9P712 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000046673 Uniprot:J9P712
Length = 1626
Score = 153 (58.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 1170 DTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
+ D C+ CG SDR + +L+C GC G H++C DPPL+ VP ++WFCP C
Sbjct: 176 EEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVPVDEWFCPEC 226
Score = 55 (24.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 21/87 (24%), Positives = 34/87 (39%)
Query: 581 DGIKTMDDETEAPDEKYEIEFEKMLNN--EKSEGVQSIHKEDTMMKRVPGVGHEAHDSMV 638
D + + D + PD + + +N E S+G ++DT +R E
Sbjct: 4 DSLDELVDRSPGPDGHRRLSPAALASNAEESSDGTSEGSEDDTGSERSYSTDGEDQSGSE 63
Query: 639 YGRDGITGKEVMNAEVGMT-VSGKRFD 664
+G G+E M A V + GK D
Sbjct: 64 DSEEGGRGEEDMEALVAVVDTQGKLED 90
Score = 42 (19.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 13/64 (20%), Positives = 23/64 (35%)
Query: 548 STSELETDPPNLSDEATKEMETTLVAKCGDNSGDGIKTMDDETEAPDEKYEIEFEKMLNN 607
S EL P + + + +A + S DG ++ + Y + E +
Sbjct: 5 SLDELVDRSPG--PDGHRRLSPAALASNAEESSDGTSEGSEDDTGSERSYSTDGEDQSGS 62
Query: 608 EKSE 611
E SE
Sbjct: 63 EDSE 66
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 665 LDESTSKMDGMKSKRKIRPSDKA-NGNVSAD 694
LDE + G R++ P+ A N S+D
Sbjct: 6 LDELVDRSPGPDGHRRLSPAALASNAEESSD 36
>UNIPROTKB|A0JNA8 [details] [associations]
symbol:PAXIP1 "PAX-interacting protein 1" species:9913 "Bos
taurus" [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001357 Pfam:PF00533 GO:GO:0006355
GO:GO:0006281 GO:GO:0006351 GO:GO:0006310 GO:GO:0016363
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 eggNOG:NOG310206
KO:K14972 EMBL:BC126589 IPI:IPI00711253 RefSeq:NP_001071385.1
UniGene:Bt.21228 ProteinModelPortal:A0JNA8 STRING:A0JNA8
PRIDE:A0JNA8 GeneID:513213 KEGG:bta:513213 CTD:22976
HOGENOM:HOG000115463 HOVERGEN:HBG061191 InParanoid:A0JNA8
OrthoDB:EOG4CRKZF NextBio:20870752 ArrayExpress:A0JNA8
Uniprot:A0JNA8
Length = 984
Score = 104 (41.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++ +TG+ DR+D+ + L G++++ L + T LIC + G KYE AK+ + I V
Sbjct: 625 IISVTGFVDNDRDDLKLMAYLAGAKYTGYLCRSN-TVLICREPTGLKYEKAKEWR-IPCV 682
Query: 86 NHRWLEDCLRV-WELLPEVNYDK 107
N +WL D L +E L + Y +
Sbjct: 683 NAQWLGDILLGNFEALRQTQYGR 705
Score = 100 (40.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 32/122 (26%), Positives = 53/122 (43%)
Query: 966 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAI 1025
+ TH IA ++ RT KF A + + I+ ++L C + KF+ E+ Y +
Sbjct: 814 KCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFVDEQNYLLRDAEAEVLFSF 873
Query: 1026 NLEAPRKWRLLRERTGHGAFHGMRI-IVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTR 1084
+LE LR F I G C P L T+K +V+ G +L+ P + +
Sbjct: 874 SLEES-----LRRAHASPLFKAKYFYITPGIC--PSLSTMKAIVECAGGKVLSRQPSFRK 926
Query: 1085 FL 1086
+
Sbjct: 927 LM 928
Score = 99 (39.9 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 25 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 84
+ CL+ +DR + ++ G L K THL+ + +GEKYE A + SIK+
Sbjct: 102 ITACLSQVSPEDRSALWAMLTFHGGGCQLNL-NRKCTHLVVPEPKGEKYECALRRASIKI 160
Query: 85 VNHRWLEDCL 94
V W+ DC+
Sbjct: 161 VTPDWVLDCI 170
Score = 52 (23.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 19/65 (29%), Positives = 25/65 (38%)
Query: 537 EVERANQEKFSSTSELETD---PPNLSDEATKEMETTLVAKCGDNSGDGIKTMDDETEAP 593
E E A E+ S +E TD P S E + E K G DD +++
Sbjct: 197 EEEGAGNEEPDSPNEGSTDGKSSPASSQEGSPSGEPPFSPKSSAEKSKGELMFDDSSDSS 256
Query: 594 DEKYE 598
EK E
Sbjct: 257 PEKQE 261
Score = 40 (19.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 22/78 (28%), Positives = 30/78 (38%)
Query: 715 VFEEALNDEKPEGVELI--HKEDAELKRIPGAGHEAHDSVVCRHDEITGKEGINAQVRTT 772
+ E+ DE LI +E+ E + GAG+E DS GK + +
Sbjct: 170 ISEKTRKDEALYHPRLIVYEEEEEEEEEEEGAGNEEPDSP--NEGSTDGKSSPASSQEGS 227
Query: 773 LSGEM-FDLDESNSKRDG 789
SGE F S K G
Sbjct: 228 PSGEPPFSPKSSAEKSKG 245
>ASPGD|ASPL0000016982 [details] [associations]
symbol:AN10434 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0000018 "regulation of DNA
recombination" evidence=IEA] [GO:0006301 "postreplication repair"
evidence=IEA] InterPro:IPR001357 Pfam:PF00533 EMBL:BN001302
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 OMA:DNTHLIT
ProteinModelPortal:C8V3U9 EnsemblFungi:CADANIAT00005074
Uniprot:C8V3U9
Length = 841
Score = 118 (46.6 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 19 IHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKK 78
I G + L+ Y + R + L+ G++ +K L + THL+ EK A++
Sbjct: 338 IPGFEKFKISLSNYVGEARSYLEHLITATGAECTKTL-RQENTHLVTAHDNSEKCSAARE 396
Query: 79 IKSIKLVNHRWLEDCLRVWELLPEVN 104
+I +VNH WLE+C W LLPE N
Sbjct: 397 W-NIHVVNHLWLEECYAQWRLLPESN 421
Score = 83 (34.3 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 35/114 (30%), Positives = 50/114 (43%)
Query: 966 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPY-----EWHKNGLS 1020
+ +H AP + RT KF A A I++ ++++ C + K L E + E K G S
Sbjct: 647 KCSHLAAPSVLRTPKFVNAIAYSPVIVQVEFITQCLKKNKLLDPEDFLLDDKEAKKFGFS 706
Query: 1021 -EDGAINLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDG 1073
E +N A K +LLR GH H I + I D K +V A G
Sbjct: 707 LEQARVNARA-NKNKLLR---GH---H----IYCVETIRGGFDAFKSIVDANGG 749
Score = 47 (21.6 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 20/94 (21%), Positives = 35/94 (37%)
Query: 143 PHNLNVG-IINAHESPKSTLEGQGLLVGSTIPEASSGIDNATDMLSTPSRVSRSHQISGF 201
P N+G ++ +S LE E S + + P + S I
Sbjct: 428 PRRTNLGEVVGQTRLDRSALESMFFASEEASSEPSRKAMQKREQNTAPGKPLGSTDID-- 485
Query: 202 DNVNITEVNGCHYTGASRDNSHEKTPNSAKVKSD 235
DN+ ++ G S+ N++ TP+ + SD
Sbjct: 486 DNM-VSNTTNATPAGRSKKNTNLHTPSHLYLASD 518
>ZFIN|ZDB-GENE-030131-624 [details] [associations]
symbol:phrf1 "PHD and ring finger domains 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518
ZFIN:ZDB-GENE-030131-624 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 GeneTree:ENSGT00530000063661 EMBL:AL928892
Ensembl:ENSDART00000150719 Bgee:H0WEE0 Uniprot:H0WEE0
Length = 1670
Score = 158 (60.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 1168 DYDTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC- 1226
+ D D+ +C+ CG DR + +L+C GC G H++C PPL++VP E+WFCP C
Sbjct: 177 EVDLDQTSCEICGGRDREDRLLLCD------GCDAGYHMECLTPPLDAVPVEEWFCPECI 230
Query: 1227 TRSRINPSKRTS 1238
+R + S++ S
Sbjct: 231 ANNRTSGSEQIS 242
Score = 49 (22.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 22/87 (25%), Positives = 42/87 (48%)
Query: 558 NLSDEATKEMETTLVAKCGDNSGDGIKTMDDET--EAPDEKYEIEFEKMLNNEKSEGVQS 615
N+S K ++++ DNS ++ ++ET E D+ E E +++L+ E+ E ++
Sbjct: 14 NVSHGKGKRPAMSIISDDEDNSEGEDESEEEETGSEGDDDDDE-EQQEILDEEEDEDEEN 72
Query: 616 IHKEDTMMKRVPGVGHEAHDSMVYGRD 642
ED VG+ + D+M D
Sbjct: 73 ---EDAGKVLEGAVGNISVDAMDLSSD 96
Score = 44 (20.5 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 270 MSSGKVDNDVLNIISSKVENAETRTVTACGEIPKRGGELCHEEESIVLPQK 320
+S GK ++IIS +N+E + E G + EE+ +L ++
Sbjct: 15 VSHGKGKRPAMSIISDDEDNSEGEDESEEEETGSEGDDDDDEEQQEILDEE 65
Score = 39 (18.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 534 LSREVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGDGIKTMDDETEAP 593
++R V ++ + S + D N E E E T ++ D+ + + + DE E
Sbjct: 11 INRNVSHGKGKR-PAMSIISDDEDNSEGEDESEEEET-GSEGDDDDDEEQQEILDEEEDE 68
Query: 594 DEKYE 598
DE+ E
Sbjct: 69 DEENE 73
Score = 38 (18.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 858 ASKVGSSDEVEKENRPVADEGQTSSPG 884
A + S DE E ++E +T S G
Sbjct: 24 AMSIISDDEDNSEGEDESEEEETGSEG 50
Score = 38 (18.4 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 865 DEVEKENRPVADEGQTSSPGVGKSILKSMKVS 896
DE E E+ D G+ VG + +M +S
Sbjct: 63 DEEEDEDEENEDAGKVLEGAVGNISVDAMDLS 94
>WB|WBGene00009507 [details] [associations]
symbol:mus-101 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0045740 "positive regulation of
DNA replication" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] InterPro:IPR001357 Pfam:PF00533
GO:GO:0009792 GO:GO:0002009 GO:GO:0008284 GO:GO:0040011
GO:GO:0000003 GO:GO:0006974 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0045740 GeneTree:ENSGT00700000104481
KO:K10728 EMBL:Z75540 RefSeq:NP_492743.3 ProteinModelPortal:Q20129
SMR:Q20129 IntAct:Q20129 MINT:MINT-228329 STRING:Q20129
PaxDb:Q20129 EnsemblMetazoa:F37D6.1 GeneID:172929
KEGG:cel:CELE_F37D6.1 UCSC:F37D6.1 CTD:172929 WormBase:F37D6.1
eggNOG:NOG236804 HOGENOM:HOG000016652 InParanoid:Q20129 OMA:YHETTHL
NextBio:877573 Uniprot:Q20129
Length = 1182
Score = 115 (45.5 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 933 FILSGHRL--QRK-EFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGR 989
F+LS + QR + Q I L G + R+ ++ TH IA ++R K + A+G+
Sbjct: 947 FLLSVSNMDPQRAADLQETIMKLGGTIEREFNK---DVTHLIASNMQRAPKVLCSIAAGK 1003
Query: 990 WILKTDYLSACSQAGKFLLEEPYEWHKNGL 1019
W L DY++ ++ G++L E+ +EW + L
Sbjct: 1004 WCLTPDYVTKSAEVGRWLDEKSFEWTREKL 1033
Score = 95 (38.5 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 25 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 84
L M +T DR + + L+ G + + + ++LI K G KY A + KS+++
Sbjct: 233 LEMAITSIDGADRTNFIQLIEDHGGKVPGTMSKTRCSYLISDKITGVKYAKAVEWKSMQI 292
Query: 85 VNHRWLEDCLRVWELLPEVNY 105
V RW+ C+ + L+ Y
Sbjct: 293 VQSRWIRKCVDLGHLVDAGKY 313
Score = 46 (21.3 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 238 PTSKNAEI---SYHSGSKFCSLNYSRKTPRKSILTMSSGKVDND 278
P+S + ++ SYH+ CS++ K + ++ GK+ +D
Sbjct: 582 PSSTSTQVGIFSYHTYCVHCSVDQEVSDDLKEKIPLNGGKLMDD 625
Score = 46 (21.3 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 35/167 (20%), Positives = 68/167 (40%)
Query: 168 VGSTIPEASSGI-DNATDMLSTPSRVSRSHQISGFDNVNITEVNGC--HYTGASRDN--S 222
+ S+ P+ + + ++ D+ S R S F N +I +++ H +G+S + S
Sbjct: 323 IRSSTPKRDANVTESVPDISSIAGHGGRLGT-SSF-NSSIPQMDQSYQHQSGSSFISFAS 380
Query: 223 HEKTPNSAKVKSDLVPTSKNAEISYHSGSKFCSLNYSRKTPRKSILTMSSGKVDNDVLNI 282
K P+S +D T + G + + TP T + V N + ++
Sbjct: 381 TSKIPSSTFTNND--STLGRSGSGVRDGIS-TPIARVQTTPLIRYPTTQTASVQN-IADV 436
Query: 283 ISSKVENAETRTVTACGEIPKRGG-ELCHEEESIVLPQKRMSNSTGA 328
IS ++ G++ + +C +ES + +R N TGA
Sbjct: 437 ISDPIDELRKNIDDGLGDLFENCMFYICGVDESRMEKWRRFLNETGA 483
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 539 ERANQEKFSSTSELETD 555
E+ ++EK +ST E+E +
Sbjct: 780 EKCSREKNNSTQEMEVE 796
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 160 (61.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1158 EIVMDLTPPNDYDTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVP 1217
+I ++ T ++ + D C+ CG SDR + +L+C GC G H++C DPPL+ VP
Sbjct: 168 KIPVENTKASEEEEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVP 221
Query: 1218 EEDWFCPTC 1226
++WFCP C
Sbjct: 222 VDEWFCPEC 230
Score = 46 (21.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 566 EMETTLVAKCGDNSGDGIKTMDDETEAPDE--KYEIEFEKMLNNEKSE 611
+ E + V GD+ D D T+ DE E + E +E SE
Sbjct: 30 DFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSE 77
Score = 45 (20.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 25/100 (25%), Positives = 42/100 (42%)
Query: 372 SPGSNGHYTIETATPSTAPNKKPLTPDLPSLKTVTSEALHSEGADRNALETCRGSKESTV 431
SPG +GH + A P+ + + S SE H +G D E S+E +
Sbjct: 13 SPGPDGHPQVGPADPAGDFEESSVGSSGDSGDDSDSE--HGDGTDG---EDEGASEEEDL 67
Query: 432 ASKT---DNEDFGMGSVHL---DGEAEDAQNLHQDLEGSS 465
++ D+ED G + + G+ E A + + D + S
Sbjct: 68 EDRSGSEDSEDDGETLLEVAGTQGKLEAAGSFNSDDDAES 107
>UNIPROTKB|G3MZP9 [details] [associations]
symbol:PAXIP1 "PAX-interacting protein 1" species:9913 "Bos
taurus" [GO:0060717 "chorion development" evidence=IEA] [GO:0060612
"adipose tissue development" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0051571 "positive regulation of histone
H3-K4 methylation" evidence=IEA] [GO:0051568 "histone H3-K4
methylation" evidence=IEA] [GO:0045830 "positive regulation of
isotype switching" evidence=IEA] [GO:0043542 "endothelial cell
migration" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0035066 "positive regulation of histone
acetylation" evidence=IEA] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=IEA] [GO:0030330 "DNA damage
response, signal transduction by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000416 "positive
regulation of histone H3-K36 methylation" evidence=IEA]
InterPro:IPR001357 Pfam:PF00533 GO:GO:0060612 GO:GO:0010212
GO:GO:0035066 GO:GO:0001570 GO:GO:0031398 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330
GO:GO:0051571 GO:GO:0043542 GO:GO:0035097 GO:GO:0060261 OMA:DIQQINR
GO:GO:0060717 GO:GO:0000416 GO:GO:0045830
GeneTree:ENSGT00600000084454 EMBL:DAAA02012116
Ensembl:ENSBTAT00000064484 Uniprot:G3MZP9
Length = 1195
Score = 104 (41.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++ +TG+ DR+D+ + L G++++ L + T LIC + G KYE AK+ + I V
Sbjct: 836 IISVTGFVDNDRDDLKLMAYLAGAKYTGYLCRSN-TVLICREPTGLKYEKAKEWR-IPCV 893
Query: 86 NHRWLEDCLRV-WELLPEVNYDK 107
N +WL D L +E L + Y +
Sbjct: 894 NAQWLGDILLGNFEALRQTQYGR 916
Score = 100 (40.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 32/122 (26%), Positives = 53/122 (43%)
Query: 966 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAI 1025
+ TH IA ++ RT KF A + + I+ ++L C + KF+ E+ Y +
Sbjct: 1025 KCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFVDEQNYLLRDAEAEVLFSF 1084
Query: 1026 NLEAPRKWRLLRERTGHGAFHGMRI-IVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTR 1084
+LE LR F I G C P L T+K +V+ G +L+ P + +
Sbjct: 1085 SLEES-----LRRAHASPLFKAKYFYITPGIC--PSLSTMKAIVECAGGKVLSRQPSFRK 1137
Query: 1085 FL 1086
+
Sbjct: 1138 LM 1139
Score = 99 (39.9 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 25 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 84
+ CL+ +DR + ++ G L K THL+ + +GEKYE A + SIK+
Sbjct: 14 ITACLSQVSPEDRSALWAMLTFHGGGCQLNL-NRKCTHLVVPEPKGEKYECALRRASIKI 72
Query: 85 VNHRWLEDCL 94
V W+ DC+
Sbjct: 73 VTPDWVLDCI 82
Score = 52 (23.4 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 19/65 (29%), Positives = 25/65 (38%)
Query: 537 EVERANQEKFSSTSELETD---PPNLSDEATKEMETTLVAKCGDNSGDGIKTMDDETEAP 593
E E A E+ S +E TD P S E + E K G DD +++
Sbjct: 109 EEEGAGNEEPDSPNEGSTDGKSSPASSQEGSPSGEPPFSPKSSAEKSKGELMFDDSSDSS 168
Query: 594 DEKYE 598
EK E
Sbjct: 169 PEKQE 173
Score = 41 (19.5 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 29/148 (19%), Positives = 55/148 (37%)
Query: 303 KRGGELCHEEESIVLPQKRMSNSTGAGSKSQKMSHNAAECNP-RSP--INYKTPVSETKS 359
K GEL ++ S P+K+ N ++ +++ P + P IN V
Sbjct: 154 KSKGELMFDDSSDSSPEKQERNLNWTPAEVPQLAAAKRRLPPGKEPGLINLCANVPPVPG 213
Query: 360 SACHSFETGNHLSPGSNGHYTIETATPSTAPNKKPLTPDLPSLKTVTSEALHSEGADR-- 417
G+ L+PG + P +P + +L+ +T+ A + + R
Sbjct: 214 GILPPEVRGSLLAPGQS------LQGPERPEVMAAWSPAMRTLRNITNNADIQQMSSRPS 267
Query: 418 NALETCRGSKESTVASKTDNEDFGMGSV 445
N + + T S+ D G+ +V
Sbjct: 268 NVAHVQKTGRAQTGLSRRAPHDVGVWTV 295
Score = 40 (19.1 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 22/78 (28%), Positives = 30/78 (38%)
Query: 715 VFEEALNDEKPEGVELI--HKEDAELKRIPGAGHEAHDSVVCRHDEITGKEGINAQVRTT 772
+ E+ DE LI +E+ E + GAG+E DS GK + +
Sbjct: 82 ISEKTRKDEALYHPRLIVYEEEEEEEEEEEGAGNEEPDSP--NEGSTDGKSSPASSQEGS 139
Query: 773 LSGEM-FDLDESNSKRDG 789
SGE F S K G
Sbjct: 140 PSGEPPFSPKSSAEKSKG 157
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/40 (25%), Positives = 23/40 (57%)
Query: 299 GEIPKRGGELCHEEESIVLPQKRMSNSTGAGSKSQKMSHN 338
GE+ GG C +++ V +++ S+ + S +++SH+
Sbjct: 531 GEVGG-GGVSCSQQDCGVSGKEQPPASSPSPSALERVSHS 569
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 160 (61.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1158 EIVMDLTPPNDYDTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVP 1217
+I ++ T ++ + D C+ CG SDR + +L+C GC G H++C DPPL+ VP
Sbjct: 164 KIPVENTKASEEEEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVP 217
Query: 1218 EEDWFCPTC 1226
++WFCP C
Sbjct: 218 VDEWFCPEC 226
Score = 42 (19.8 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 372 SPGSNGHYTIETATPSTAPNKKPLTPDLPSLKTVTSEALHSEGADRNALETCRGSKESTV 431
SPG +GH + A P A + + D S++ H +G D E S+E +
Sbjct: 13 SPGPDGHPQVGPADP--AESSVGSSGDSGD----DSDSEHGDGTDG---EDEGASEEEDL 63
Query: 432 ASKT---DNEDFGMGSVHL---DGEAEDAQNLHQDLEGSS 465
++ D+ED G + + G+ E A + + D + S
Sbjct: 64 EDRSGSEDSEDDGETLLEVAGTQGKLEAAGSFNSDDDAES 103
Score = 41 (19.5 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 572 VAKCGDNSGDGIKTMDDETEAPDE--KYEIEFEKMLNNEKSE 611
V GD+ D D T+ DE E + E +E SE
Sbjct: 32 VGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSE 73
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 665 LDESTSKMDGMKSKRKIRPSDKANGNVSADKET 697
LDE ++ G ++ P+D A +V + ++
Sbjct: 6 LDELVARSPGPDGHPQVGPADPAESSVGSSGDS 38
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 114 (45.2 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 1170 DTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
D D+ C+ CG + E++L+C C G H C PPL +P+ +WFCP C
Sbjct: 690 DDDE-PCKKCGLPNHPELILLCDS------CDSGYHTACLRPPLMIIPDGEWFCPPC 739
Score = 82 (33.9 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 45/221 (20%), Positives = 93/221 (42%)
Query: 534 LSREVERAN--QEKFSSTSELETDPP-NLSDEATKEMETTLVAKCGDNS---GDGIKTMD 587
+ EV ++ EK S ET PP N+ D K V +C S G +K +D
Sbjct: 407 IPEEVPKSTLESEKPGSPEAAETSPPSNIIDHCEKLASEKEVVECQSTSTVGGQSVKKVD 466
Query: 588 DETEAPDEKY-EIEFEKMLNNEKSEGVQ-------SIHKEDTMMKRVPGVGHEAHDSMVY 639
ET D ++ ++E + L+N ++ G++ S+ K K VP E +
Sbjct: 467 LETLKEDSEFTKVEMDN-LDNAQTSGIEEPSETKGSMQKSKFKYKLVP----EEETTASE 521
Query: 640 GRDGITGKEVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGNVSADKETVE 699
+ + ++ ++ + +S ++ D S K+ ++K++ ++ NV T+
Sbjct: 522 NTEITSERQKEGIKLTIRISSRKKKPD-SPPKVLEPENKQEKTEKEEEKTNVG---RTLR 577
Query: 700 SWXXXXXXXXXKVGNVFEEALNDEKPEGVELIHKEDAELKR 740
KV + ++ + ++ EG + + +E L++
Sbjct: 578 R-SPRISRPTAKVAEIRDQKADKKRGEGEDEVEEESTALQK 617
Score = 64 (27.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 57/279 (20%), Positives = 104/279 (37%)
Query: 352 TPVSE-TKSSACHSFETGNHLSP----GSNGHYTI--ETATPSTAPNKKPLTPDLPSLKT 404
TP E K ET +S G G + E + APN K T + +
Sbjct: 209 TPTKEFLKDEIKQEEETCKRISTITALGHEGKQLVNGEVSDERVAPNFK--TEPIETKFY 266
Query: 405 VTSEALHSEGADRNALETCRGSKE-STVASKTDNEDFGMGSVHLDGEAEDAQNLHQDLEG 463
T E +S DRN + G++ ++V + + + L +A+ + ++ LE
Sbjct: 267 ETKEESYSPSKDRNIITEGNGTESLNSVITSMKTGELEKETAPLRKDADSSISV---LEI 323
Query: 464 SSAKNRFLVMDKSPRPVNIDSPQVGKDKLIAKPIRKKMVAKKAFGSGHTTNRKGXXXXXX 523
S K + D ++DS ++ KD + +K A S + KG
Sbjct: 324 HSQKAQIEEPDPPEMETSLDSSEMAKD----------LSSKTALSSTESCTMKGEEKSPK 373
Query: 524 XXXXXXPAV--CLSREVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGD 581
P + CL + +E++ + ++ + P ++T E E + + S
Sbjct: 374 TKKDKRPPILECLEK-LEKSKKTFLDKDAQRLSPIPEEVPKSTLESEKPGSPEAAETSPP 432
Query: 582 GIKTMDDETEAPDEKYEIEFEKMLNNEKSEGVQSIHKED 620
+D + EK +E + + + G QS+ K D
Sbjct: 433 S-NIIDHCEKLASEKEVVECQ----STSTVGGQSVKKVD 466
>CGD|CAL0004594 [details] [associations]
symbol:ESC4 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035361 "Cul8-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0000018 "regulation of DNA
recombination" evidence=IEA] [GO:0010526 "negative regulation of
transposition, RNA-mediated" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR001357 CGD:CAL0004594 Pfam:PF00533
GO:GO:0071216 GO:GO:0036180 GO:GO:0009267 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0036170 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 eggNOG:NOG248673 RefSeq:XP_722356.1
RefSeq:XP_722495.1 ProteinModelPortal:Q5ALY1 GeneID:3635727
GeneID:3635868 KEGG:cal:CaO19.1445 KEGG:cal:CaO19.9020
Uniprot:Q5ALY1
Length = 903
Score = 145 (56.1 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 1 MPVDAASIMY-RPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANK 59
+P+++ + Y +P L+G+ G L + +T Y + R + L+ +MG F+K L +
Sbjct: 323 LPLNSNILYYPQPSTPLDGLQG---LKISITNYSGEARSYLSKLITIMGGVFTKTLTRDN 379
Query: 60 VTHLICYKFEGEKYELA--KKIKS-----IKLVNHRWLEDCLRVWELLPEVNYDK 107
+L+C K EG+K++ A K + S IK+VNH WLEDC W + + + DK
Sbjct: 380 -DYLVCGKAEGKKFDAALNKWVDSEGNSEIKVVNHLWLEDCYVQWHKV-DSSLDK 432
Score = 52 (23.4 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 971 IAPEIRRTEKFFAAAASGRWILKTDYL 997
IAP+I RTEKF + + I+ +YL
Sbjct: 711 IAPKILRTEKFLRSLSKVDKIIHPNYL 737
Score = 45 (20.9 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 18/87 (20%), Positives = 41/87 (47%)
Query: 617 HKEDTMMKRVPGVGHEAHDSMVY-GRDGITGKEVMNA---EVGMTVSGKRFDLDESTSKM 672
HK D+ + + G E+ + GR + +EV+ + T S ++D+S S+
Sbjct: 424 HKVDSSLDKYKNFGDESIGMEPWVGRAHLD-QEVLKQWYEDEEKTASNSSGNIDDSMSED 482
Query: 673 DGMKSKRKIRPSDKANGNVSADKETVE 699
+ +S+R ++ + + +++ VE
Sbjct: 483 ESTQSRRGATTKEQLDHSQTSEPVNVE 509
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 235 DLVPTSKNAEISYHSGSKF 253
D V + N E+ Y + SKF
Sbjct: 765 DKVNKNTNLELGYSTNSKF 783
>UNIPROTKB|Q5ALY1 [details] [associations]
symbol:ESC4 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0009267 "cellular response to
starvation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR001357 CGD:CAL0004594 Pfam:PF00533 GO:GO:0071216
GO:GO:0036180 GO:GO:0009267 EMBL:AACQ01000008 EMBL:AACQ01000007
GO:GO:0036170 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
eggNOG:NOG248673 RefSeq:XP_722356.1 RefSeq:XP_722495.1
ProteinModelPortal:Q5ALY1 GeneID:3635727 GeneID:3635868
KEGG:cal:CaO19.1445 KEGG:cal:CaO19.9020 Uniprot:Q5ALY1
Length = 903
Score = 145 (56.1 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 1 MPVDAASIMY-RPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANK 59
+P+++ + Y +P L+G+ G L + +T Y + R + L+ +MG F+K L +
Sbjct: 323 LPLNSNILYYPQPSTPLDGLQG---LKISITNYSGEARSYLSKLITIMGGVFTKTLTRDN 379
Query: 60 VTHLICYKFEGEKYELA--KKIKS-----IKLVNHRWLEDCLRVWELLPEVNYDK 107
+L+C K EG+K++ A K + S IK+VNH WLEDC W + + + DK
Sbjct: 380 -DYLVCGKAEGKKFDAALNKWVDSEGNSEIKVVNHLWLEDCYVQWHKV-DSSLDK 432
Score = 52 (23.4 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 971 IAPEIRRTEKFFAAAASGRWILKTDYL 997
IAP+I RTEKF + + I+ +YL
Sbjct: 711 IAPKILRTEKFLRSLSKVDKIIHPNYL 737
Score = 45 (20.9 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 18/87 (20%), Positives = 41/87 (47%)
Query: 617 HKEDTMMKRVPGVGHEAHDSMVY-GRDGITGKEVMNA---EVGMTVSGKRFDLDESTSKM 672
HK D+ + + G E+ + GR + +EV+ + T S ++D+S S+
Sbjct: 424 HKVDSSLDKYKNFGDESIGMEPWVGRAHLD-QEVLKQWYEDEEKTASNSSGNIDDSMSED 482
Query: 673 DGMKSKRKIRPSDKANGNVSADKETVE 699
+ +S+R ++ + + +++ VE
Sbjct: 483 ESTQSRRGATTKEQLDHSQTSEPVNVE 509
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 235 DLVPTSKNAEISYHSGSKF 253
D V + N E+ Y + SKF
Sbjct: 765 DKVNKNTNLELGYSTNSKF 783
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 160 (61.4 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1158 EIVMDLTPPNDYDTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVP 1217
+I ++ T ++ + D C+ CG SDR + +L+C GC G H++C DPPL+ VP
Sbjct: 167 KIPVENTKASEEEEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVP 220
Query: 1218 EEDWFCPTC 1226
++WFCP C
Sbjct: 221 VDEWFCPEC 229
Score = 41 (19.5 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 572 VAKCGDNSGDGIKTMDDETEAPDE--KYEIEFEKMLNNEKSE 611
V GD+ D D T+ DE E + E +E SE
Sbjct: 35 VGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSE 76
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/100 (25%), Positives = 42/100 (42%)
Query: 372 SPGSNGHYTIETATPSTAPNKKPLTPDLPSLKTVTSEALHSEGADRNALETCRGSKESTV 431
SPG +GH + A P+ + + S SE H +G D E S+E +
Sbjct: 13 SPGPDGHPQVGPADPA-GDFESSVGSSGDSGDDSDSE--HGDGTDG---EDEGASEEEDL 66
Query: 432 ASKT---DNEDFGMGSVHL---DGEAEDAQNLHQDLEGSS 465
++ D+ED G + + G+ E A + + D + S
Sbjct: 67 EDRSGSEDSEDDGETLLEVAGTQGKLEAAGSFNSDDDAES 106
>MGI|MGI:1890430 [details] [associations]
symbol:Paxip1 "PAX interacting (with
transcription-activation domain) protein 1" species:10090 "Mus
musculus" [GO:0000416 "positive regulation of histone H3-K36
methylation" evidence=IMP] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0030330 "DNA damage response, signal transduction
by p53 class mediator" evidence=ISO] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=IMP] [GO:0035066
"positive regulation of histone acetylation" evidence=IMP]
[GO:0035097 "histone methyltransferase complex" evidence=ISO;IDA]
[GO:0043542 "endothelial cell migration" evidence=IMP] [GO:0045830
"positive regulation of isotype switching" evidence=IMP]
[GO:0051568 "histone H3-K4 methylation" evidence=ISO] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IMP]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=ISO;IMP] [GO:0060612 "adipose
tissue development" evidence=IMP] [GO:0060717 "chorion development"
evidence=IMP] InterPro:IPR001357 MGI:MGI:1890430 Pfam:PF00533
GO:GO:0006281 GO:GO:0060612 GO:GO:0006351 GO:GO:0006974
GO:GO:0010212 GO:GO:0006310 GO:GO:0035066 GO:GO:0001570
GO:GO:0031398 GO:GO:0016363 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330 eggNOG:NOG310206
GO:GO:0051571 GO:GO:0043542 GO:GO:0035097 GO:GO:0060261 KO:K14972
CTD:22976 HOGENOM:HOG000115463 HOVERGEN:HBG061191 OrthoDB:EOG4CRKZF
OMA:DIQQINR ChiTaRS:PAXIP1 GO:GO:0060717 GO:GO:0000416
GO:GO:0045830 EMBL:AF104261 EMBL:AK144606 EMBL:BC066014
IPI:IPI00421197 RefSeq:NP_061366.2 UniGene:Mm.277190
UniGene:Mm.409895 HSSP:Q14676 ProteinModelPortal:Q6NZQ4 SMR:Q6NZQ4
IntAct:Q6NZQ4 STRING:Q6NZQ4 PhosphoSite:Q6NZQ4 PaxDb:Q6NZQ4
PRIDE:Q6NZQ4 Ensembl:ENSMUST00000002291 GeneID:55982 KEGG:mmu:55982
UCSC:uc008wtr.1 GeneTree:ENSGT00600000084454 InParanoid:Q6NZQ4
NextBio:311686 Bgee:Q6NZQ4 Genevestigator:Q6NZQ4 Uniprot:Q6NZQ4
Length = 1056
Score = 111 (44.1 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 28/70 (40%), Positives = 36/70 (51%)
Query: 25 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 84
L CL+ +DR + LV G L K THLI + +GEKYE A K SIK+
Sbjct: 102 LTACLSQVSSEDRSALWALVTFHGGSCQLNL-NKKCTHLIVPEPKGEKYERAVKRTSIKI 160
Query: 85 VNHRWLEDCL 94
V W+ DC+
Sbjct: 161 VTPDWVLDCV 170
Score = 110 (43.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++ +TG+ DR+D+ + L G++++ L + T LIC + G KYE AK+ + I V
Sbjct: 697 IISVTGFVDNDRDDLKLMAYLAGAKYTGYLCRSN-TVLICKEPSGLKYEKAKEWR-IPCV 754
Query: 86 NHRWLEDCLRV-WELLPEVNYDK 107
N +WL D L +E L +V Y +
Sbjct: 755 NAQWLGDILLGNFEALRQVQYSR 777
Score = 97 (39.2 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 32/121 (26%), Positives = 53/121 (43%)
Query: 966 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAI 1025
+ TH IA ++ RT KF A + + I+ D+L C + F+ E+ Y +
Sbjct: 886 KCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQTFIDEQNYILRDAEAEVLFSF 945
Query: 1026 NLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRF 1085
+LE K + F+ I G C P L T+K +V+ G +LA P + +
Sbjct: 946 SLEESLKRAHVSPLFKTKYFY----ITPGIC--PSLATMKAIVECAGGKVLAKQPSFRKL 999
Query: 1086 L 1086
+
Sbjct: 1000 M 1000
Score = 37 (18.1 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 674 GMKSKRKIRPSDKANGNVSADKETVE 699
G++ K++P++ AN S+ + +E
Sbjct: 814 GVRLPPKLKPNEVANIQPSSKRARIE 839
>UNIPROTKB|F1P482 [details] [associations]
symbol:PAXIP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000416 "positive regulation of histone H3-K36
methylation" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0030330 "DNA damage response, signal transduction
by p53 class mediator" evidence=IEA] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=IEA] [GO:0035066
"positive regulation of histone acetylation" evidence=IEA]
[GO:0035097 "histone methyltransferase complex" evidence=IEA]
[GO:0043542 "endothelial cell migration" evidence=IEA] [GO:0045830
"positive regulation of isotype switching" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=IEA] [GO:0060612 "adipose
tissue development" evidence=IEA] [GO:0060717 "chorion development"
evidence=IEA] InterPro:IPR001357 Pfam:PF00533 GO:GO:0010212
GO:GO:0035066 GO:GO:0031398 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330 GO:GO:0051571
GO:GO:0043542 GO:GO:0035097 GO:GO:0060261 OMA:DIQQINR GO:GO:0000416
GO:GO:0045830 GeneTree:ENSGT00600000084454 EMBL:AADN02000335
EMBL:AADN02000336 EMBL:AADN02000337 IPI:IPI00594414
Ensembl:ENSGALT00000010241 Uniprot:F1P482
Length = 1062
Score = 102 (41.0 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 25/65 (38%), Positives = 33/65 (50%)
Query: 28 CLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLVNH 87
CL+ +DR + L+ G L K THLI + +GEKYE A K SIK+V
Sbjct: 110 CLSQVSSEDRNTLWALITFYGGNCQLNL-NKKCTHLIVPEPKGEKYECACKHDSIKIVTP 168
Query: 88 RWLED 92
W+ D
Sbjct: 169 EWVVD 173
Score = 98 (39.6 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 32/122 (26%), Positives = 54/122 (44%)
Query: 966 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAI 1025
+ TH IA ++ RT KF A + + I+ ++L C + KF+ E+ +
Sbjct: 908 KCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFVDEQNFVLRDAEAEVLFCF 967
Query: 1026 NLEAPRKWRLLRERTGHGAFHGMRI-IVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTR 1084
+LE K R + F G I G C P L T+K +V+ G +L+ P + +
Sbjct: 968 SLEESLK----RAQVAP-LFKGKYFYITPGIC--PSLSTMKAIVECAGGKVLSKQPSFRK 1020
Query: 1085 FL 1086
+
Sbjct: 1021 LM 1022
Score = 91 (37.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 27/86 (31%), Positives = 48/86 (55%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKF---EGEKYELAKKIKSI 82
++ +TG+ DR+D+ + L G++++ L + T LIC + G KYE AK+ + I
Sbjct: 717 IISVTGFVDSDRDDLKLMAYLAGAKYTGYLCRSN-TVLICKETIRPSGLKYEKAKEWR-I 774
Query: 83 KLVNHRWLEDCLRV-WELLPEVNYDK 107
VN +WL D L +E L ++ + +
Sbjct: 775 PCVNAQWLCDILLGNFEALRQIQHSR 800
Score = 45 (20.9 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 20/68 (29%), Positives = 29/68 (42%)
Query: 537 EVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKC---GDNSGDGIK---TMDDET 590
E E A E+ S +E TD LS AT + L + ++ D K DD +
Sbjct: 203 EEEEAENEEQDSQNEASTDE-KLSSPATSREGSPLGDQAFSPKSSTADKAKGELMFDDSS 261
Query: 591 EAPDEKYE 598
++ EK E
Sbjct: 262 DSSPEKQE 269
Score = 39 (18.8 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 28/108 (25%), Positives = 45/108 (41%)
Query: 401 SLKTVTSEALHSEGADRNALETCRGSKESTVASKTDNEDFGMGSVHLDGEAEDAQNLHQD 460
S+K VT E + AD+ E + + + E+ + E E+A+N QD
Sbjct: 162 SIKIVTPEWVVDSVADKAKKEETPYHPRLIIYEEEEEEE--------EEEEEEAENEEQD 213
Query: 461 LEGSSAKNRFLVMDKSPRPVNIDSPQVGKDKLIAKPIRKKMVAKKAFG 508
+ ++ + L SP SP +G D+ + P K A KA G
Sbjct: 214 SQNEASTDEKL---SSPATSREGSP-LG-DQAFS-P--KSSTADKAKG 253
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 159 (61.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 1170 DTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRS 1229
+ D C+ CG SDR + +L+C GC G H++C DPPL+ VP ++WFCP C
Sbjct: 185 EEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVPVDEWFCPECAVP 238
Query: 1230 RINPS 1234
++P+
Sbjct: 239 GVDPT 243
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 411 HSEGADR----NALETCRGSKESTVASKTDNEDFGMGSVH---LDGEAEDAQNLHQDLEG 463
HS G D + E ++ES+ D+ED GS DGE + + +D E
Sbjct: 12 HSPGPDGPPQVGSSELASDAEESSNGHSEDSED-DTGSEQDDDTDGEETEGLSEEEDPED 70
Query: 464 SS 465
S
Sbjct: 71 RS 72
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 442 MGSVHLDGEAEDAQNLH-QDLEGSSAKNR 469
+GS L +AE++ N H +D E + +
Sbjct: 22 VGSSELASDAEESSNGHSEDSEDDTGSEQ 50
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 159 (61.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 1170 DTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRS 1229
+ D C+ CG SDR + +L+C GC G H++C DPPL+ VP ++WFCP C
Sbjct: 185 EEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVPVDEWFCPECAVP 238
Query: 1230 RINPS 1234
++P+
Sbjct: 239 GVDPT 243
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 411 HSEGADR----NALETCRGSKESTVASKTDNEDFGMGSVH---LDGEAEDAQNLHQDLEG 463
HS G D + E ++ES+ D+ED GS DGE + + +D E
Sbjct: 12 HSPGPDGPPQVGSSELASDAEESSNGHSEDSED-DTGSEQDDDTDGEETEGLSEEEDPED 70
Query: 464 SS 465
S
Sbjct: 71 RS 72
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 442 MGSVHLDGEAEDAQNLH-QDLEGSSAKNR 469
+GS L +AE++ N H +D E + +
Sbjct: 22 VGSSELASDAEESSNGHSEDSEDDTGSEQ 50
>UNIPROTKB|Q96T23 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0050434
"positive regulation of viral transcription" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006334 "nucleosome assembly" evidence=IDA;TAS]
[GO:0042393 "histone binding" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0043392 "negative regulation of DNA
binding" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 Reactome:REACT_115566
GO:GO:0045893 GO:GO:0005654 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 EMBL:AP000580 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0042393 GO:GO:0034080 GO:GO:0016584
PROSITE:PS50827 GO:GO:0050434 GO:GO:0043392 eggNOG:NOG79337
GO:GO:0031213 EMBL:AF380176 EMBL:AF227948 EMBL:AP000609
EMBL:AP002343 EMBL:AF059317 EMBL:BC046124 EMBL:AK001268
IPI:IPI00290652 IPI:IPI00514411 IPI:IPI00982445 RefSeq:NP_057662.3
UniGene:Hs.420229 ProteinModelPortal:Q96T23 SMR:Q96T23
IntAct:Q96T23 STRING:Q96T23 PhosphoSite:Q96T23 DMDM:251757329
PaxDb:Q96T23 PRIDE:Q96T23 DNASU:51773 Ensembl:ENST00000308488
Ensembl:ENST00000360355 Ensembl:ENST00000480887 GeneID:51773
KEGG:hsa:51773 UCSC:uc001oym.3 CTD:51773 GeneCards:GC11M077371
H-InvDB:HIX0022742 HGNC:HGNC:18118 HPA:CAB022626 MIM:608522
neXtProt:NX_Q96T23 PharmGKB:PA29210 HOGENOM:HOG000154205
HOVERGEN:HBG105728 InParanoid:Q96T23 KO:K11657 OMA:QPRVLPS
OrthoDB:EOG441QBQ PhylomeDB:Q96T23 ChiTaRS:RSF1 GenomeRNAi:51773
NextBio:55899 Bgee:Q96T23 CleanEx:HS_RSF1 Genevestigator:Q96T23
GermOnline:ENSG00000048649 Uniprot:Q96T23
Length = 1441
Score = 114 (45.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 1170 DTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
D D+ C+ CG + E++L+C C G H C PPL +P+ +WFCP C
Sbjct: 889 DDDE-PCKKCGLPNHPELILLCDS------CDSGYHTACLRPPLMIIPDGEWFCPPC 938
Score = 82 (33.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 45/221 (20%), Positives = 93/221 (42%)
Query: 534 LSREVERAN--QEKFSSTSELETDPP-NLSDEATKEMETTLVAKCGDNS---GDGIKTMD 587
+ EV ++ EK S ET PP N+ D K V +C S G +K +D
Sbjct: 606 IPEEVPKSTLESEKPGSPEAAETSPPSNIIDHCEKLASEKEVVECQSTSTVGGQSVKKVD 665
Query: 588 DETEAPDEKY-EIEFEKMLNNEKSEGVQ-------SIHKEDTMMKRVPGVGHEAHDSMVY 639
ET D ++ ++E + L+N ++ G++ S+ K K VP E +
Sbjct: 666 LETLKEDSEFTKVEMDN-LDNAQTSGIEEPSETKGSMQKSKFKYKLVP----EEETTASE 720
Query: 640 GRDGITGKEVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGNVSADKETVE 699
+ + ++ ++ + +S ++ D S K+ ++K++ ++ NV T+
Sbjct: 721 NTEITSERQKEGIKLTIRISSRKKKPD-SPPKVLEPENKQEKTEKEEEKTNVG---RTLR 776
Query: 700 SWXXXXXXXXXKVGNVFEEALNDEKPEGVELIHKEDAELKR 740
KV + ++ + ++ EG + + +E L++
Sbjct: 777 R-SPRISRPTAKVAEIRDQKADKKRGEGEDEVEEESTALQK 816
>POMBASE|SPBC582.05c [details] [associations]
symbol:brc1 "BRCT domain protein Brc1" species:4896
"Schizosaccharomyces pombe" [GO:0000018 "regulation of DNA
recombination" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0006301
"postreplication repair" evidence=IMP] [GO:0051276 "chromosome
organization" evidence=IGI] InterPro:IPR001357 PomBase:SPBC582.05c
Pfam:PF00533 GO:GO:0005634 GO:GO:0051301 GO:GO:0007067
EMBL:CU329671 GenomeReviews:CU329671_GR SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051276 PIR:T37978
RefSeq:NP_595173.1 PDB:3L40 PDB:3L41 PDBsum:3L40 PDBsum:3L41
ProteinModelPortal:Q10337 STRING:Q10337 EnsemblFungi:SPBC582.05c.1
GeneID:2541071 KEGG:spo:SPBC582.05c eggNOG:NOG310206 OMA:DNTHLIT
OrthoDB:EOG4MGWGQ EvolutionaryTrace:Q10337 NextBio:20802185
GO:GO:0006301 GO:GO:0000018 Uniprot:Q10337
Length = 878
Score = 95 (38.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 48 GSQFSKPLVANKVTHLICYKFEGEKYE--LAKKIKSIKLVNHRWLEDCLRVWELLPEVNY 105
G +FSK L+ + +THL Y G K + L K SIKL++ +WL DCL+ +L+ + Y
Sbjct: 136 GGRFSKGLMKS-MTHLFTYSGMGAKCKKVLDKPSLSIKLIHPQWLLDCLQFGQLIDQDPY 194
Score = 94 (38.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 31/123 (25%), Positives = 56/123 (45%)
Query: 966 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAI 1025
+ TH IAP I RT KF + G ++ D++++C + + + EEPY + +
Sbjct: 696 KCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDEEPYLLNDPEKELELGC 755
Query: 1026 NLEAPRKWRLLRERT-GHGAFHGMRIIVYGDCIAPP-LDTLKRVVKAGDGNILATSPPYT 1083
LE+ K R R G + + +AP + + +VK+ +G + +T Y
Sbjct: 756 TLESALK----RARAQGPSLLEDYVVYLTSKTVAPENVPAVISIVKS-NGGVCSTLNVYN 810
Query: 1084 RFL 1086
+ L
Sbjct: 811 KRL 813
>UNIPROTKB|F1PXY6 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000010559 Uniprot:F1PXY6
Length = 1637
Score = 153 (58.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 1170 DTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
+ D C+ CG SDR + +L+C GC G H++C DPPL+ VP ++WFCP C
Sbjct: 185 EEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVPVDEWFCPEC 235
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 665 LDESTSKMDGMKSKRKIRPSDKA-NGNVSAD 694
LDE + G R++ P+ A N S+D
Sbjct: 6 LDELVDRSPGPDGHRRLSPAALASNAEESSD 36
>UNIPROTKB|F1SSQ2 [details] [associations]
symbol:BARD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042325 "regulation of
phosphorylation" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184 SMART:SM00248
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0042325 GO:GO:0046872 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00550000074487 InterPro:IPR017907
GO:GO:0070531 GO:GO:0031436 OMA:KKNSIKM GO:GO:0046826 GO:GO:0085020
EMBL:CU856276 Ensembl:ENSSSCT00000017605 Uniprot:F1SSQ2
Length = 780
Score = 119 (46.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 47/154 (30%), Positives = 64/154 (41%)
Query: 930 PIWFILSG-HRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAP--EIRRTEKFFAAAA 986
P+ I SG Q+K + LK + C + + TH + P ++ T K
Sbjct: 572 PLVLIGSGLSSEQQKMLSELAAMLKAKKCAE---FDSAVTHVVVPGDTVQSTLKCMLGIL 628
Query: 987 SGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFH 1046
SG WILK +++ AC Q K EE YE E PR+ RL RE+ F
Sbjct: 629 SGCWILKFEWVKACLQRKKCEQEEKYEIP------------EGPRRSRLNREQLLPKLFD 676
Query: 1047 GMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSP 1080
G G P D L ++V A G IL+ P
Sbjct: 677 GCYFYFGGTFKHHPKDNLIKLVTAAGGQILSRKP 710
Score = 62 (26.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 175 ASSGIDNATDMLSTPSRVSRSHQISGFDNVNITEVNGCHYTGASRDNSHEKTPNSAKVKS 234
AS ++ D+L++ S V+ S + F V++ H ++ +E +
Sbjct: 249 ASPQMNGEIDLLASGS-VTESECLGSFTEVSLPLAE--HIESPETESKNEAVTPEKTLCE 305
Query: 235 DLVPTSKNAEISYHSGSKFCSLNYSR---KTPRKSILTMSSGKVDNDVLN 281
+++ SK + S H+G++ C + K R SI + S V VL+
Sbjct: 306 NVLDESKKSLPSRHNGNRGCRSRLTSPVSKRCRNSIPSTSGNSVKQTVLS 355
>MGI|MGI:1923718 [details] [associations]
symbol:Uhrf2 "ubiquitin-like, containing PHD and RING finger
domains 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO;ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISS] [GO:0042393
"histone binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 MGI:MGI:1923718
Prosite:PS00299 Prosite:PS00518 GO:GO:0030154 GO:GO:0071158
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 eggNOG:COG3440 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 HOGENOM:HOG000124662
HOVERGEN:HBG059298 InterPro:IPR021991 Pfam:PF12148
OrthoDB:EOG408N7M CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AB116653
EMBL:AF274047 EMBL:AK031036 EMBL:AK041564 EMBL:AK042321
EMBL:AK051743 EMBL:AK080925 EMBL:BC060241 IPI:IPI00169767
IPI:IPI00607019 IPI:IPI00757694 RefSeq:NP_659122.2
UniGene:Mm.313364 ProteinModelPortal:Q7TMI3 SMR:Q7TMI3
STRING:Q7TMI3 PhosphoSite:Q7TMI3 PRIDE:Q7TMI3
Ensembl:ENSMUST00000025739 GeneID:109113 KEGG:mmu:109113
UCSC:uc008hef.1 UCSC:uc008heh.1 UCSC:uc008hei.1 InParanoid:Q7TMI3
NextBio:361658 Bgee:Q7TMI3 Genevestigator:Q7TMI3
GermOnline:ENSMUSG00000024817 Uniprot:Q7TMI3
Length = 803
Score = 128 (50.1 bits), Expect = 0.00038, P = 0.00038
Identities = 28/63 (44%), Positives = 35/63 (55%)
Query: 1170 DTDKITCQACGCSDRGE-----VMLICGDESGSVGCGVGMHIDCCDPPLESVPEED-WFC 1223
D DK TC C C GE + L+C DE C + HI C PPL+ VPEE+ W+C
Sbjct: 338 DPDK-TCHMCSCHKCGEKRDPNMQLLC-DE-----CNMAYHIYCLSPPLDKVPEEEYWYC 390
Query: 1224 PTC 1226
P+C
Sbjct: 391 PSC 393
>RGD|1309990 [details] [associations]
symbol:Uhrf2 "ubiquitin-like with PHD and ring finger domains 2,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005720 "nuclear
heterochromatin" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 RGD:1309990
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0005720 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0051865 Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:CH473953
Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M CTD:115426 KO:K15713 IPI:IPI00213897
RefSeq:NP_001101055.1 UniGene:Rn.2173 Ensembl:ENSRNOT00000015406
GeneID:309331 KEGG:rno:309331 UCSC:RGD:1309990 NextBio:660596
Uniprot:D3ZK36
Length = 803
Score = 128 (50.1 bits), Expect = 0.00038, P = 0.00038
Identities = 28/63 (44%), Positives = 35/63 (55%)
Query: 1170 DTDKITCQACGCSDRGE-----VMLICGDESGSVGCGVGMHIDCCDPPLESVPEED-WFC 1223
D DK TC C C GE + L+C DE C + HI C PPL+ VPEE+ W+C
Sbjct: 338 DPDK-TCHMCSCHKCGEKRDPNMQLLC-DE-----CNMAYHIYCLSPPLDKVPEEEYWYC 390
Query: 1224 PTC 1226
P+C
Sbjct: 391 PSC 393
>CGD|CAL0003038 [details] [associations]
symbol:orf19.6506 species:5476 "Candida albicans" [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IEA]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 CGD:CAL0003038 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACQ01000020 EMBL:AACQ01000016
eggNOG:NOG145066 RefSeq:XP_720831.1 RefSeq:XP_721344.1
RefSeq:XP_888831.1 ProteinModelPortal:Q5AH34 GeneID:3637022
GeneID:3637451 GeneID:3703842 KEGG:cal:CaO19.13859
KEGG:cal:CaO19.6506 KEGG:cal:CaO19_6506 Uniprot:Q5AH34
Length = 688
Score = 109 (43.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 1176 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRSRINP 1233
C ACG + IC ++ C H CCDPP+E PE++W+C C ++++P
Sbjct: 273 CFACGMPG----IFICCEK-----CPKSFHFTCCDPPIEEAPEDEWYCRECY-TKVHP 320
Score = 68 (29.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 41/158 (25%), Positives = 67/158 (42%)
Query: 325 STGAGSKSQKMSHNAAECNPRS-PINYKTP-VSETKSSACHSFETGNHLSPGSNGHYTIE 382
STG KS++ S A+ S P +P + E + S+ +GN G+ E
Sbjct: 40 STGDEVKSKRKSARIAQLEAESIPKLSASPEIKEGRKSSKPGSVSGN----GNTVFVEPE 95
Query: 383 TATPSTAPNKKPLTPDLPSLKTVTSEALHSEGADRNALETCRGSKESTVASKTDNEDFGM 442
A P+ + PL + PS K + E+L A ++ S+EST T ++
Sbjct: 96 LAAPTPSYTGLPLE-EFPSNK-IKKESLWP--AKYRRTKSSDSSRESTA---TPGDEIDT 148
Query: 443 GSVHLDGEAEDAQNLHQDLEGSSAKNRFLVMDK-SPRP 479
V D + +L +DL S + L+ +K S +P
Sbjct: 149 NKVEADYQHNLKTSLSEDLAKESELRQSLLNEKTSSKP 186
>UNIPROTKB|I3LTW3 [details] [associations]
symbol:I3LTW3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00390000008296
EMBL:AEMK01185240 EMBL:CU928954 Ensembl:ENSSSCT00000025343
Uniprot:I3LTW3
Length = 113
Score = 101 (40.6 bits), Expect = 0.00045, P = 0.00045
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 1200 CGVGMHIDCCDPPLESVPEED-WFCPTC 1226
C + HI C +PPL+ VPEE+ W+CP+C
Sbjct: 8 CNMAYHIYCLNPPLDKVPEEEYWYCPSC 35
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 130 (50.8 bits), Expect = 0.00048, P = 0.00048
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1167 NDYDT-DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPT 1225
+D D D++ C AC +++L+C + GC G H CCDP L+ VPE +W CP
Sbjct: 312 DDEDPMDQVFCVACNEGKDEDLLLLCDID----GCNNGRHTYCCDPVLDEVPEGEWRCPK 367
Query: 1226 CTRS 1229
C S
Sbjct: 368 CIES 371
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 130 (50.8 bits), Expect = 0.00048, P = 0.00048
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1167 NDYDT-DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPT 1225
+D D D++ C AC +++L+C + GC G H CCDP L+ VPE +W CP
Sbjct: 312 DDEDPMDQVFCVACNEGKDEDLLLLCDID----GCNNGRHTYCCDPVLDEVPEGEWRCPK 367
Query: 1226 CTRS 1229
C S
Sbjct: 368 CIES 371
>TAIR|locus:2031412 [details] [associations]
symbol:MEI1 "AT1G77320" species:3702 "Arabidopsis
thaliana" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0007131 "reciprocal meiotic
recombination" evidence=TAS] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0007143 "female meiosis" evidence=IMP]
InterPro:IPR001357 Pfam:PF00533 EMBL:CP002684 GO:GO:0006974
GO:GO:0016853 GO:GO:0007143 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 KO:K10728 IPI:IPI00533208 RefSeq:NP_177856.2
UniGene:At.34497 ProteinModelPortal:F4I701 SMR:F4I701 PRIDE:F4I701
EnsemblPlants:AT1G77320.1 GeneID:844068 KEGG:ath:AT1G77320
OMA:CCLAMDG Uniprot:F4I701
Length = 972
Score = 120 (47.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 5 AASIMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLI 64
++ I+Y PL + G SL +C + + ++ E + L ++G+ F + L KVTHLI
Sbjct: 647 SSHILYSPLPCQTPLPGFESLCICSSQHNEKNVELLRNLSVVLGADFVERLT-RKVTHLI 705
Query: 65 CYKFEGEKYELAKKIKSIKLVNHRWLEDCLR 95
C +G+KY A K I V WL +C+R
Sbjct: 706 CNFAKGDKYVRASKWGIIS-VTPDWLYECVR 735
Score = 59 (25.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 598 EIEFEKMLNNEKSEGVQSIHKEDTM-MKRVPG-VGHEAH--DSMVYGRDGITGKEVMNAE 653
EI E+ ++K++ ++ + D ++ +P +H D +V G D +G+EV +
Sbjct: 807 EIGKEQTFPSKKAKLLRDGQESDVFPVRELPSNCDRPSHSGDGIVTGYDVASGREV--PD 864
Query: 654 VGMTVSGKRFDLDESTSKMDGMKSKRKI 681
V T+ DL E TSK+ KS +I
Sbjct: 865 VADTIE----DLLEQTSKIQDQKSPGRI 888
>TAIR|locus:2169779 [details] [associations]
symbol:ATXR6 "AT5G24330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IEP] [GO:0046976 "histone
methyltransferase activity (H3-K27 specific)" evidence=IDA]
[GO:0070734 "histone H3-K27 methylation" evidence=IDA] [GO:0006275
"regulation of DNA replication" evidence=IGI;RCA] [GO:0000280
"nuclear division" evidence=RCA] [GO:0000911 "cytokinesis by cell
plate formation" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
SMART:SM00249 SMART:SM00317 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006275 GO:GO:0046872 EMBL:AB016884
GO:GO:0008270 EMBL:AB006701 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0009901
InterPro:IPR019786 PROSITE:PS01359 EMBL:BT012223 EMBL:BT012421
IPI:IPI00543408 RefSeq:NP_197821.1 UniGene:At.30965
ProteinModelPortal:Q9FNE9 SMR:Q9FNE9 DIP:DIP-48530N STRING:Q9FNE9
PRIDE:Q9FNE9 EnsemblPlants:AT5G24330.1 GeneID:832503
KEGG:ath:AT5G24330 TAIR:At5g24330 eggNOG:NOG305320
HOGENOM:HOG000238747 InParanoid:Q9FNE9 OMA:VICPDRR PhylomeDB:Q9FNE9
ProtClustDB:CLSN2686326 Genevestigator:Q9FNE9 GermOnline:AT5G24330
GO:GO:0046976 Uniprot:Q9FNE9
Length = 349
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 1150 SNLLSKAEEIVMDLTPPNDYDTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCC 1209
SN S+ + + D +D+DT C+ C + +L+C D+ C G H+ C
Sbjct: 12 SNPRSEPPQHMSDHDSDSDWDT---VCEECSSGKQPAKLLLC-DK-----CDKGFHLFCL 62
Query: 1210 DPPLESVPEEDWFCPTCTRSRINPS 1234
P L SVP+ WFCP+C++ +I S
Sbjct: 63 RPILVSVPKGSWFCPSCSKHQIPKS 87
>ZFIN|ZDB-GENE-091204-206 [details] [associations]
symbol:si:dkey-21n12.3 "si:dkey-21n12.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 SMART:SM00384 ZFIN:ZDB-GENE-091204-206 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR018501 PROSITE:PS50827 EMBL:AL929053
GeneTree:ENSGT00530000064411 IPI:IPI00497346
Ensembl:ENSDART00000077161 Bgee:F1Q6Y6 Uniprot:F1Q6Y6
Length = 1369
Score = 114 (45.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 1131 YSLERHVQYNTHAWAEKSLSNLLSKAEEIVMDLTPPNDYDTDKITCQACGCSDRGEVMLI 1190
Y +E+ + + E+ S+ + + E D TP +D C+ CG + E++L+
Sbjct: 820 YKVEKSKKRRRNRNRERRSSDSSTSSSE---DDTPNDD------PCKHCGLPNHPELILL 870
Query: 1191 CGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
C C G H C PPL +P+ +WFCP C
Sbjct: 871 CDS------CDSGYHTACLRPPLMIIPDGEWFCPPC 900
Score = 68 (29.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 34/170 (20%), Positives = 78/170 (45%)
Query: 539 ERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGDGIK---------TMDDE 589
+ + QE T E+ +L D +KE + +L+ + ++ + +K + DD+
Sbjct: 467 KESKQESLKDTPSKESKGESLKDAPSKESKESLLKESKESKEESLKDPPGKESAKSKDDK 526
Query: 590 TEAPDEKYEIEFEKMLNNEKS-EGVQSIHKEDTMMKR-VPGVGHEAHDSMVYGRDGITGK 647
T+A +K +E ++NEKS + ++ +D K + + +E+ S+ +D +
Sbjct: 527 TKALSKKESLED---ISNEKSAKSLKDDATKDPSKKESLQDISNESTKSV--SKDD-AAQ 580
Query: 648 EVMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGNVSADKET 697
+ N E ++ + D+ + +S + P+ K + ++ A KE+
Sbjct: 581 DHFNKESSKDLASEESGKDQPAKDLSNEESIKN-PPNQKPSKDL-AKKES 628
>UNIPROTKB|Q96PU4 [details] [associations]
symbol:UHRF2 "E3 ubiquitin-protein ligase UHRF2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=IDA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEP] [GO:0051726 "regulation of cell cycle" evidence=TAS]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0008270 GO:GO:0005720
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 EMBL:AL353718 eggNOG:COG3440 Gene3D:2.30.280.10
HOGENOM:HOG000124662 HOVERGEN:HBG059298 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M EMBL:AB071698 EMBL:AF274049
EMBL:AL133480 EMBL:BC028397 EMBL:AL137728 IPI:IPI00044681
IPI:IPI00395464 RefSeq:NP_690856.1 UniGene:Hs.493401 PDB:1WY8
PDB:1Z6U PDB:2E6S PDB:3OLN PDBsum:1WY8 PDBsum:1Z6U PDBsum:2E6S
PDBsum:3OLN ProteinModelPortal:Q96PU4 SMR:Q96PU4 IntAct:Q96PU4
MINT:MINT-1196856 STRING:Q96PU4 PhosphoSite:Q96PU4 DMDM:67462076
PaxDb:Q96PU4 PeptideAtlas:Q96PU4 PRIDE:Q96PU4 DNASU:115426
Ensembl:ENST00000276893 Ensembl:ENST00000450508
Ensembl:ENST00000468435 GeneID:115426 KEGG:hsa:115426
UCSC:uc003zjy.3 CTD:115426 GeneCards:GC09P006405 HGNC:HGNC:12557
HPA:HPA026633 HPA:HPA026697 neXtProt:NX_Q96PU4 PharmGKB:PA37197
InParanoid:Q96PU4 KO:K15713 OMA:VNHNSKE ChiTaRS:UHRF2
EvolutionaryTrace:Q96PU4 GenomeRNAi:115426 NextBio:79598
ArrayExpress:Q96PU4 Bgee:Q96PU4 CleanEx:HS_UHRF2
Genevestigator:Q96PU4 GermOnline:ENSG00000147854 Uniprot:Q96PU4
Length = 802
Score = 125 (49.1 bits), Expect = 0.00079, P = 0.00079
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 1175 TCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEED-WFCPTC 1226
+C+ CG + L+C DE C V HI C +PPL+ VPEE+ W+CP+C
Sbjct: 346 SCRVCGGKHEPNMQLLC-DE-----CNVAYHIYCLNPPLDKVPEEEYWYCPSC 392
>TAIR|locus:504955937 [details] [associations]
symbol:AT2G22795 "AT2G22795" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] GO:GO:0005794 EMBL:CP002685
GO:GO:0005768 GO:GO:0005802 IPI:IPI00534353 RefSeq:NP_850032.1
UniGene:At.45724 UniGene:At.74141 PRIDE:F4IKG5
EnsemblPlants:AT2G22795.1 GeneID:816810 KEGG:ath:AT2G22795
OMA:ESTCRKT Uniprot:F4IKG5
Length = 734
Score = 124 (48.7 bits), Expect = 0.00090, P = 0.00090
Identities = 72/290 (24%), Positives = 124/290 (42%)
Query: 535 SREVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGD-GIKTMDDETEAP 593
S EV ++EK +S SE + S T+E+E +++ N+ D G + D+++
Sbjct: 308 SSEVVHESEEK-TSESENSEKVEDKSGIKTEEVEDSVIKSVLPNTTDNGESSSDEKSTGS 366
Query: 594 DEKYEIEFEKMLNNEKSEGVQSIHKEDTMMKRVPGVGHEAHDSMVYGRDGITGKEVMNAE 653
+E + L KSEG +S+ K + + K E +DS G +TGK + +
Sbjct: 367 SSGHESD---SLEGIKSEG-ESMEKNELLEK-------EFNDSN--GESSVTGKSTGSGD 413
Query: 654 VGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGNVSADKETVESWXXXXXXXXXKVG 713
G + + +ES K K K + +++ + KE ES +
Sbjct: 414 GGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEES--------SSQEE 465
Query: 714 NVFEEALNDEKPEGVELIHKEDAELKRIPGAGHEAHDSVVCRHDEITGKEGINAQVRTT- 772
+ +E EK E ED E ++I + E + DE KE ++Q +T
Sbjct: 466 TMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKE---KEDETKEKEESSSQEKTEE 522
Query: 773 LSGEMFDLDESNSKRDGTKCKINRAKKRPSGKASLKTLSADKGTVESKKD 822
E D +ES+S+ + TK K N +K +AS + S + T +K+
Sbjct: 523 KETETKDNEESSSQEE-TKDKEN--EKIEKEEASSQEESKENETETKEKE 569
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1239 1165 0.00094 123 3 11 23 0.47 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 631 (67 KB)
Total size of DFA: 534 KB (2243 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 120.71u 0.09s 120.80t Elapsed: 00:00:06
Total cpu time: 120.73u 0.09s 120.82t Elapsed: 00:00:06
Start: Tue May 21 18:38:53 2013 End: Tue May 21 18:38:59 2013