BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000879
(1239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04251|Y4211_ARATH BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana
GN=At4g02110 PE=1 SV=3
Length = 1329
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 182/300 (60%), Positives = 225/300 (75%)
Query: 861 VGSSDEVEKENRPVADEGQTSSPGVGKSILKSMKVSMKNKIGGNVNSNSIPLDKSLNKLD 920
VG + EKEN V +E + G +S + KV+ K G S L +
Sbjct: 1028 VGDNSAKEKENIAVDNESRKVGSGGDQSPVARKKVAKSAKTGTKAEKESKQLRVNPLASR 1087
Query: 921 KSLNKLKDEPIWFILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEK 980
K + EP +FI+SG R QR E+Q +IR LKG+ CRDSHQWSYQATHFIAPEIRRTEK
Sbjct: 1088 KVFQDQEHEPKFFIVSGPRSQRNEYQQIIRRLKGKCCRDSHQWSYQATHFIAPEIRRTEK 1147
Query: 981 FFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERT 1040
FFAAAASG WILKTDY++ +AGK L EEPYEWH +GLS DGAINLE+P+KWRL+RE+T
Sbjct: 1148 FFAAAASGSWILKTDYVADSKEAGKLLQEEPYEWHSSGLSADGAINLESPKKWRLVREKT 1207
Query: 1041 GHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVDFAVVSPGMP 1100
GHGA +G+RI+VYGDC P LDTLKR VKAGDG ILAT+PPYTRFLN DFA++SPGMP
Sbjct: 1208 GHGALYGLRIVVYGDCTIPCLDTLKRAVKAGDGTILATAPPYTRFLNQNTDFALISPGMP 1267
Query: 1101 RVDLWVQEFLKHEIPCVVADYLVEFVCKPGYSLERHVQYNTHAWAEKSLSNLLSKAEEIV 1160
R D+W+QEF++HEIPCV++DYLVE+VCKPGY+L++HV YNT++WAEKS + + +A+ V
Sbjct: 1268 RDDVWIQEFIRHEIPCVLSDYLVEYVCKPGYALDKHVLYNTNSWAEKSFNKMQLRADLCV 1327
Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 225/679 (33%), Positives = 328/679 (48%), Gaps = 120/679 (17%)
Query: 4 DAASIMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHL 63
+A SI+YRPL+DLNGI G+ +LV+CLTGYQ DREDIM +V LMG QFSKPLVAN+VTHL
Sbjct: 91 NANSILYRPLRDLNGIPGSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANRVTHL 150
Query: 64 ICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNYDKSGYELETMEAEAKDSE 123
ICYKFEGEKYELAK+IK IKLVNHRWLEDCL+ W+LLPEV+Y+ SGYEL+ MEA A+DSE
Sbjct: 151 ICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLLPEVDYEISGYELDIMEASARDSE 210
Query: 124 EEIEVASLKQFGGRDVNKSPHNLNVGIINAHESPKSTLEGQGLLVGSTIP--EASSGIDN 181
+E E AS+K N SP L VG + A E K G P E SS +
Sbjct: 211 DEAEDASVKP-----ANTSPLGLRVGAVPAVEISKPG--------GKDFPLEEGSSLCNT 257
Query: 182 ATDMLSTPSRVSRSHQISGFDNVNITEVNGCHYTGASRDNSHEKTPNSAKVKSDLVPTSK 241
+ D TP R R + ++ + + + +Y R + +K+++D TS
Sbjct: 258 SKDNWLTPKRTDRPFEAMVSTDLGVAQQH--NYVSPIRVANKTPEQGMSKMETD-GSTSI 314
Query: 242 NAEISYHSGSKFCSLNYSRKTPRKSILTMSSGK----------VDN------DVLNIISS 285
N I HS YSRKT ++S T + GK +D+ N +S
Sbjct: 315 NRSIRRHS----SLATYSRKTLQRSPETDTLGKESSGQNRSLRMDDKGLKASSAFNTSAS 370
Query: 286 KVENAETRT--VTACGEIPKRGGELCHEEE-SIVLPQKRMSNSTGAGSKSQKMSHNA--- 339
K ++ RT G+I ++ H EE ++PQ + ++ + + S ++ HN+
Sbjct: 371 KSGSSMERTSLFRDLGKI-----DMLHGEEFPPMMPQAKFTDGSVSRKDSLRVHHNSEAS 425
Query: 340 ---------AECNPRSPINYKTPVSETKSSACHSFETGNHLSPGSNGHYTIETATPSTAP 390
E P SP + PV S S E G H SP T E T +
Sbjct: 426 IPPPSSLLLQELRPSSPNDNLRPVMSI-SDPTESEEAG-HKSP------TSELNTKLLSS 477
Query: 391 NKKPLTPDLPSLKTVTS--------EALHSEGADRNAL--ETCRGSKESTV--------- 431
N P+ L + + + S E +E N L E GS + +
Sbjct: 478 NVVPMVDALSTAENIISNCAWDEIPEKSLTERMTENVLLQEQRSGSPKQNLSVVPNLREA 537
Query: 432 ASKTDNED-----FGMGSVHLDGEAEDAQNLHQDLEGSSAKNRFLVMDKSPRPVNID--- 483
A + D D F G V ++ + +N ++G+ +D+ P D
Sbjct: 538 AHELDLSDSAARLFNSGVVPMEADIRTPEN--STMKGA--------LDEVPERSVTDPVM 587
Query: 484 -----SPQVG----KDKLIAKPIRKKMVAKKAFGS----GHTTNRKGSIYSNKISSLSSP 530
SP G KDK + KK KK+ G+ + N+KGSIY ++ S
Sbjct: 588 RRSSTSPGSGLIRMKDKQETELTTKKTAPKKSLGTRGRKKNPINQKGSIYLSEPSPTDER 647
Query: 531 AVCLSREVERANQEKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGDGIKTMDDET 590
VCL++ + + ++++ E P L+ E ++M + + + GI ++D+++
Sbjct: 648 NVCLNK--GKVSAPVTGNSNQKEISSPVLNTEVVQDMAKHIDTET--EALQGIDSVDNKS 703
Query: 591 EAPDEKYEIEFEKMLNNEK 609
AP+EK + + M+N +K
Sbjct: 704 LAPEEKDHLVLDLMVNQDK 722
>sp|Q800K6|TOB1A_XENLA DNA topoisomerase 2-binding protein 1-A OS=Xenopus laevis GN=topbp1-A
PE=1 SV=2
Length = 1513
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 941 QRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSAC 1000
+R ++ +I L G + + + TH + R EK+ A+ A+G+W+L YL AC
Sbjct: 1272 ERIDYSQLIEELGGVVI-EKQCFDPSCTHIVVGHPLRNEKYLASMAAGKWVLHRSYLEAC 1330
Query: 1001 SQAGKFLLEEPYEW-HKNGLSEDGAIN------LEAPRKWRL----LRERTG--HGAFHG 1047
A +F+ EE YEW + LS IN EA +WR +++ G GAF G
Sbjct: 1331 RAAKRFIQEEDYEWGSMSILSAVTNINPQQRMLAEAAMRWRKKLQGIKQNMGIAEGAFSG 1390
Query: 1048 MRIIVYGDCIAPPLDTLKRVVKAGDGNILA--TSPPYTRFLNSGVDFAVVSPGMPRVDLW 1105
++I+ D P KR++++G + A +SP + + DF+ + P PRV+
Sbjct: 1391 WKVILNVDQTKEP--GFKRLLQSGGAKVFAGHSSPLFKEASHLFADFSKLKPDEPRVN-- 1446
Query: 1106 VQEFLKHEIPCVVADYLVEFVCK 1128
V E + C+ +Y+ +++ K
Sbjct: 1447 VAEAAAQGVNCLKPEYIADYLMK 1469
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 27 MCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLVN 86
+C+TG DR+++ L L G +++ L N+ THLI + +G+KYE A+K ++ ++
Sbjct: 204 ICVTGLSSLDRKEVQRLTALHGGEYTGQLKMNESTHLIVQEAKGQKYECARKW-NVHCIS 262
Query: 87 HRWLEDCL 94
+W D +
Sbjct: 263 VQWFFDSI 270
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 9 MYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLV--AN------KV 60
++ P+ L G V+ ++ + +R+ ++ L L+G++ + V AN
Sbjct: 621 LFTPVPFLEGSTPLRECVLSVSQFMGAERDSLVYLAGLLGAKVQEFFVRKANPKKGMFAS 680
Query: 61 THLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNYDKSGYELETMEAEAK 120
THL+ EG KYE AKK ++ V WL C R D+ Y ++ + E K
Sbjct: 681 THLVLKDAEGSKYEAAKKW-NLPAVTMNWLLQCARTGR-----KADEDSYLVDNVPEEDK 734
Query: 121 D 121
D
Sbjct: 735 D 735
>sp|Q7ZZY3|TOB1B_XENLA DNA topoisomerase 2-binding protein 1-B OS=Xenopus laevis GN=topbp1-B
PE=2 SV=1
Length = 1513
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 941 QRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSAC 1000
+R ++ +I L G + + + TH + R EK+ A+ A+G+W+L YL AC
Sbjct: 1272 ERIDYSQLIEELGGVVI-EKQCFDPSCTHIVVGHPLRNEKYLASMAAGKWVLHRSYLEAC 1330
Query: 1001 SQAGKFLLEEPYEW-HKNGLSEDGAIN------LEAPRKWRL----LRERTG--HGAFHG 1047
A +F+ EE YEW + LS IN EA +WR +++ G GAF G
Sbjct: 1331 RAAKRFIQEEDYEWGSMSILSAVTNINPQQRMLAEAAMRWRKKLQGIKQNMGIAEGAFSG 1390
Query: 1048 MRIIVYGDCIAPPLDTLKRVVKAGDGNILA--TSPPYTRFLNSGVDFAVVSPGMPRVDLW 1105
++I+ D P KR++++G + A +SP + + DF+ + P PRV+
Sbjct: 1391 WKVILNVDQTKEP--GFKRLLQSGGAKVFAGHSSPLFKEASHLFADFSKLKPDEPRVN-- 1446
Query: 1106 VQEFLKHEIPCVVADYLVEFVCK 1128
V E + C+ +Y+ +++ K
Sbjct: 1447 VAEAAAQGVNCLKPEYIADYLMK 1469
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 27 MCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLVN 86
+C+TG DR+++ L L G +++ L N+ THLI + +G+KYE A+K
Sbjct: 204 ICVTGLSSLDRKEVQRLTALHGGEYTGQLKMNESTHLIVQEAKGQKYECARK-------- 255
Query: 87 HRWLEDCLRVWELLPEVN----YDKSGYELE 113
W+ C+ V + D++ Y++E
Sbjct: 256 --WIVHCISVQWFFDSIEKGFCQDETMYKIE 284
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 9 MYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLV--AN------KV 60
++ P+ L G V+ ++ + +R+ ++ L L+G++ + V AN
Sbjct: 621 LFTPVPFLEGSTPLRECVLSVSQFMGAERDSLVYLAGLLGAKVQEFFVRKANPKKGMFAR 680
Query: 61 THLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPEVNYDKSGYELETMEAEAK 120
+HL EG KYE AKK ++ V WL C R + D+ Y ++ + E K
Sbjct: 681 SHLDLKDAEGSKYEAAKKW-NLPAVTMNWLLQCARTGK-----KADEDSYLVDNVPEEDK 734
Query: 121 D 121
D
Sbjct: 735 D 735
>sp|A6QR20|ANR32_BOVIN Ankyrin repeat domain-containing protein 32 OS=Bos taurus GN=ANKRD32
PE=2 SV=2
Length = 1055
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 968 THFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINL 1027
TH IA + ++EKF AA A+G+W+L DY+ +Q+G++L E YEW + +D +
Sbjct: 44 THLIAERLCKSEKFLAACAAGKWVLTKDYIIHSAQSGRWLDETTYEW-GYKIEKDSHYSP 102
Query: 1028 E---APRKWRLLRERTGH-GAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNIL 1076
+ AP++WR +RTG GAFH ++++ D+L RV++AG N++
Sbjct: 103 QMQSAPKRWREELKRTGAPGAFHKWKVVLLVRADKRS-DSLVRVLEAGKANVI 154
>sp|Q9BQI6|ANR32_HUMAN Ankyrin repeat domain-containing protein 32 OS=Homo sapiens
GN=ANKRD32 PE=1 SV=2
Length = 1058
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 13/134 (9%)
Query: 968 THFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINL 1027
TH IA + ++EKF AA A+G+WIL DY+ +++G++L E YEW + +D +
Sbjct: 44 THLIAERLCKSEKFLAACAAGKWILTKDYIIHSAKSGRWLDETTYEW-GYKIEKDSRYSP 102
Query: 1028 E---APRKWRLLRERTGH-GAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGN-ILATSPPY 1082
+ AP++WR +RTG GAFH ++++ D+L RV++AG N IL S P
Sbjct: 103 QMQSAPKRWREELKRTGAPGAFHRWKVVLLVRTDKRS-DSLIRVLEAGKANVILPKSSP- 160
Query: 1083 TRFLNSGVDFAVVS 1096
SG+ + S
Sbjct: 161 -----SGITHVIAS 169
>sp|Q8R3P9|ANR32_MOUSE Ankyrin repeat domain-containing protein 32 OS=Mus musculus
GN=Ankrd32 PE=2 SV=3
Length = 1054
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 935 LSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQ-ATHFIAPEIRRTEKFFAAAASGRWILK 993
++G +++ KE +++ L C Y+ TH IA + ++EKF AA A+G+W+L
Sbjct: 12 MTGFKMEEKE--ALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWVLT 69
Query: 994 TDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLE---APRKWRLLRERTGH-GAFHGMR 1049
DY+ +++G++L E YEW + +D + + AP++WR +RTG GAFH +
Sbjct: 70 KDYIIHSAKSGRWLDETTYEWGYK-IEKDSHYSPQMQSAPKRWREELKRTGAPGAFHRWK 128
Query: 1050 IIVYGDCIAPPLDTLKRVVKAGDGN-ILATSPPYTRFLNSGVDFAVVSPGMPRVDLWVQE 1108
+++ D+L RV++AG N IL + P SG+ + S + +
Sbjct: 129 VVLLVRADKRS-DSLVRVLEAGKANVILPKNSP------SGITHVIASNARISAEREQEN 181
Query: 1109 FLKHEIPCVVADYLVEFVCKPGYSLERHVQYNTHA 1143
F + P YL +F+ LE+ +Q + H+
Sbjct: 182 F---KAPFYPIQYLGDFL------LEKEIQNDEHS 207
>sp|Q6ZQF0|TOPB1_MOUSE DNA topoisomerase 2-binding protein 1 OS=Mus musculus GN=Topbp1 PE=1
SV=2
Length = 1515
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 28/234 (11%)
Query: 911 PLDKSLNKLDKSLNKLKDEPIWFILSGHRLQRKEFQVVIRHLKGRL----CRDSHQWSYQ 966
P DK + +++ K+K + ++ + S + +R ++ +I+ L G + C D
Sbjct: 1246 PADK-IETQEETHRKVKKQYVFQMSSLNSQERIDYCRLIKDLGGSVIEKQCSDP-----S 1299
Query: 967 ATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGL------- 1019
TH + R EK+ A+ A+G+W+L YL AC AG+F+ EE YEW + +
Sbjct: 1300 CTHMVVGYPLRNEKYLASMAAGKWVLHRSYLDACKTAGRFVQEEDYEWGSSSILDALPDV 1359
Query: 1020 SEDGAINLEAPRKWRLLRERTG-----HGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGN 1074
+E A +WR +++ GAF G + I+ D P KR+++AG
Sbjct: 1360 TEHQQKLALAAMRWRKRIQQSQESGIVEGAFSGWKAILRVD--RPREAGFKRLLQAGGAK 1417
Query: 1075 ILATSP-PYTR-FLNSGVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFV 1126
+L+ P P + + DF + P RV ++ E + C+ +Y+ +++
Sbjct: 1418 VLSGHPEPLLKDATHLFCDFNKLKPDDCRV--FIAEATAQNMVCLKTEYIADYL 1469
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++C+TG R+ + L G Q+ L N+ THLI + +G+KYE A++ ++ V
Sbjct: 204 IICVTGLNGIHRKTVQQLTAKHGGQYMGQLKMNECTHLIVQEPKGQKYECARRW-NVHCV 262
Query: 86 NHRWLEDCL 94
+W D +
Sbjct: 263 TLQWFHDSI 271
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 1172 DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRSRI 1231
D C+ CG SDR + +L+C GC G H++C DPPL+ VP ++WFCP CT +
Sbjct: 184 DPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVPVDEWFCPECTVPGV 237
Query: 1232 NPS 1234
+P+
Sbjct: 238 DPT 240
>sp|Q92547|TOPB1_HUMAN DNA topoisomerase 2-binding protein 1 OS=Homo sapiens GN=TOPBP1 PE=1
SV=3
Length = 1522
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 919 LDKSLNKLKDEPIWFILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRT 978
++++ +LK + I+ + S + +R ++ +I L G L + + TH + R
Sbjct: 1257 IEETHEELKKQYIFQLSSLNPQERIDYCHLIEKLGG-LVIEKQCFDPTCTHIVVGHPLRN 1315
Query: 979 EKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNG-LSEDGAINLEAPR------ 1031
EK+ A+ A+G+W+L YL AC AG F+ EE YEW + L IN++ R
Sbjct: 1316 EKYLASVAAGKWVLHRSYLEACRTAGHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAM 1375
Query: 1032 KWR---LLRERTG--HGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILA--TSPPYTR 1084
+WR R+ +G GAF G ++I++ D KR++++G +L + P +
Sbjct: 1376 RWRKKIQQRQESGIVEGAFSGWKVILHVD--QSREAGFKRLLQSGGAKVLPGHSVPLFKE 1433
Query: 1085 FLNSGVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFV 1126
+ D + P V+ + E + C+ +Y+ +++
Sbjct: 1434 ATHLFSDLNKLKPDDSGVN--IAEAAAQNVYCLRTEYIADYL 1473
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 26 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 85
++C+TG DR+++ L G Q+ L N+ THLI + +G+KYE AK+ ++ V
Sbjct: 204 IICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRW-NVHCV 262
Query: 86 NHRWLEDCL 94
+W D +
Sbjct: 263 TTQWFFDSI 271
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus norvegicus
GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 1176 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRSRINPS 1234
C+ CG SDR + +L+C GC G H++C DPPL+ VP ++WFCP C ++P+
Sbjct: 191 CEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVPVDEWFCPECAVPGVDPT 243
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 1158 EIVMDLTPPNDYDTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVP 1217
+I ++ T ++ + D C+ CG SDR + +L+C GC G H++C DPPL+ VP
Sbjct: 168 KIPVENTKASEEEEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVP 221
Query: 1218 EEDWFCPTC 1226
++WFCP C
Sbjct: 222 VDEWFCPEC 230
>sp|Q8RXD4|BRCA1_ARATH Protein BREAST CANCER SUSCEPTIBILITY 1 homolog OS=Arabidopsis
thaliana GN=BRCA1 PE=2 SV=1
Length = 941
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 960 SHQWSYQATHFIAP-----EIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEW 1014
S W TH IA +RT KF A G+WIL D++ AC + K++ EEPYE
Sbjct: 760 SKNWDSTVTHVIASINENGACKRTLKFMMAILEGKWILTIDWIKACMKNTKYVSEEPYE- 818
Query: 1015 HKNGLSEDGAINLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGN 1074
++ D E P R + F G++ + GD L+ ++ A G
Sbjct: 819 ----ITMDVHGIREGPYLGRQRALKKKPKLFTGLKFYIMGDFELAYKGYLQDLIVAAGGT 874
Query: 1075 ILATSP 1080
IL P
Sbjct: 875 ILRRRP 880
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 1171 TDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRSR 1230
+K+TC C D E +L+C GC G HI C P +E+VPE DWFC C +
Sbjct: 1660 VNKVTCLVCRKGDNDEFLLLCD------GCDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQ 1713
Query: 1231 I 1231
+
Sbjct: 1714 V 1714
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 1171 TDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRSR 1230
+K+TC C D E +L+C GC G HI C P +E+VPE DWFC C +
Sbjct: 1674 VNKVTCLVCRKGDNDEFLLLCD------GCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQ 1727
Query: 1231 I 1231
+
Sbjct: 1728 V 1728
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 1176 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
C+ CG E +L+C GC H C DPPL S+P+EDW+C C
Sbjct: 271 CEYCGLDKNPETILLCD------GCEAAYHTSCLDPPLTSIPKEDWYCDAC 315
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 1173 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
K+ CQ C D E++L+C GC G H C P + ++P+ DWFCP C
Sbjct: 1931 KVYCQICRKGDNEELLLLCD------GCDKGCHTYCHRPKITTIPDGDWFCPAC 1978
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 1173 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
K+ CQ C D E++L+C GC G H C P + ++P+ DWFCP C
Sbjct: 1895 KVYCQICRKGDNEELLLLCD------GCDKGCHTYCHRPKITTIPDGDWFCPAC 1942
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 1172 DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
+K+TC C D E++L+C C G H C P + +PE DWFCPTC
Sbjct: 1475 NKVTCLYCRKGDNDELLLLCD------SCDRGCHTYCHRPRMNEIPEGDWFCPTC 1523
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 1176 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
C+ C GE M++C GC G HI C P L+ VPE DWFCP C
Sbjct: 225 CKVCRKKGDGESMVLCD------GCDRGHHIYCVRPKLKYVPEGDWFCPEC 269
>sp|O70445|BARD1_MOUSE BRCA1-associated RING domain protein 1 OS=Mus musculus GN=Bard1 PE=2
SV=1
Length = 765
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 927 KDEPIWFILSG-HRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAP--EIRRTEKFFA 983
K+ P+ FI SG Q+K + LK + C ++ TH I P E + T K
Sbjct: 554 KNGPLVFIGSGLSSQQQKMLSKLETVLKAKKCM---EFDSTVTHVIVPDEEAQSTLKCML 610
Query: 984 AAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHG 1043
SG WILK D++ AC + EE YE P++ RL RE+
Sbjct: 611 GILSGCWILKFDWVKACLDSKVREQEEKYEVPG------------GPQRSRLNREQLLPK 658
Query: 1044 AFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSP 1080
F G + G+ P D L +++ A G +L+ P
Sbjct: 659 LFDGCYFFLGGNFKHHPRDDLLKLIAAAGGKVLSRKP 695
>sp|Q61T02|KDM5_CAEBR Lysine-specific demethylase rbr-2 OS=Caenorhabditis briggsae GN=rbr-2
PE=3 SV=2
Length = 1482
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1172 DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRS 1229
+++ C +C +++L+C E GC G H CCDP L+ VPE +W CP C S
Sbjct: 321 EQVYCVSCNEGKDEDLLLLCDIE----GCNSGRHTYCCDPVLDEVPEGEWRCPKCIES 374
>sp|Q99728|BARD1_HUMAN BRCA1-associated RING domain protein 1 OS=Homo sapiens GN=BARD1 PE=1
SV=2
Length = 777
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 927 KDEPIWFILSGHRLQRK----EFQVVIRHLKGRLCRDSHQWSYQATHFIAP--EIRRTEK 980
+D P+ I SG +++ E V+++ + ++ TH + P ++ T K
Sbjct: 566 RDGPLVLIGSGLSSEQQKMLSELAVILK------AKKYTEFDSTVTHVVVPGDAVQSTLK 619
Query: 981 FFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERT 1040
+G WILK +++ AC + EE YE E PR+ RL RE+
Sbjct: 620 CMLGILNGCWILKFEWVKACLRRKVCEQEEKYEIP------------EGPRRSRLNREQL 667
Query: 1041 GHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSP 1080
F G ++G P D L ++V AG G IL+ P
Sbjct: 668 LPKLFDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILSRKP 707
>sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2
Length = 1441
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 1176 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
C+ CG + E++L+C C G H C PPL +P+ +WFCP C
Sbjct: 894 CKKCGLPNHPELILLCD------SCDSGYHTACLRPPLMIIPDGEWFCPPC 938
>sp|Q23541|KDM5_CAEEL Lysine-specific demethylase rbr-2 OS=Caenorhabditis elegans GN=rbr-2
PE=1 SV=2
Length = 1477
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 1173 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRS 1229
++ C AC +++L+C + GC G H CCDP L+ VPE +W CP C S
Sbjct: 319 QVFCVACNEGKDEDLLLLCDID----GCNNGRHTYCCDPVLDEVPEGEWRCPKCIES 371
>sp|Q6J6I8|BRCA1_GORGO Breast cancer type 1 susceptibility protein homolog OS=Gorilla
gorilla gorilla GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 27/206 (13%)
Query: 933 FILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAAAS 987
++SG L +EF +V + + ++ + + TH + RT K+F A
Sbjct: 1652 MVVSG--LTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAG 1709
Query: 988 GRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHG 1047
G+W++ +++ + GK L E +E + + N + P++ R ++R F G
Sbjct: 1710 GKWVVSYFWVTQSIKEGKMLNEHDFEVRGDVV---NGRNHQGPKRARESQDRK---IFRG 1763
Query: 1048 MRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDLWV 1106
+ I YG P D L+ +V+ +++ +T L +GV VV P D W
Sbjct: 1764 LDICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFT--LGTGVHPIVVVQP-----DAWT 1816
Query: 1107 QEFLKHEI------PCVVADYLVEFV 1126
++ H I P V +++++ V
Sbjct: 1817 EDNGFHAIGQMCEAPVVTREWVLDSV 1842
>sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1 SV=1
Length = 803
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 13/63 (20%)
Query: 1170 DTDKITCQACGCSDRGE-----VMLICGDESGSVGCGVGMHIDCCDPPLESVPEED-WFC 1223
D DK TC C C GE + L+C DE C + HI C PPL+ VPEE+ W+C
Sbjct: 338 DPDK-TCHMCSCHKCGEKRDPNMQLLC-DE-----CNMAYHIYCLSPPLDKVPEEEYWYC 390
Query: 1224 PTC 1226
P+C
Sbjct: 391 PSC 393
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 1176 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
C+ C E M++C GC G H C P L++VPE DWFCP C
Sbjct: 1151 CKICRKKGDAENMVLCD------GCDRGHHTYCVRPKLKTVPEGDWFCPEC 1195
>sp|Q96PU4|UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2 OS=Homo sapiens GN=UHRF2 PE=1 SV=1
Length = 802
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
Query: 1175 TCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEED-WFCPTC 1226
+C+ CG + L+C DE C V HI C +PPL+ VPEE+ W+CP+C
Sbjct: 346 SCRVCGGKHEPNMQLLC-DE-----CNVAYHIYCLNPPLDKVPEEEYWYCPSC 392
>sp|Q6J6J0|BRCA1_PONPY Breast cancer type 1 susceptibility protein homolog OS=Pongo pygmaeus
GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 933 FILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAAAS 987
++SG L +EF +V + + ++ + + TH + RT K+F A
Sbjct: 1652 MVVSG--LTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAG 1709
Query: 988 GRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHG 1047
G+W++ +++ + K L E +E + + N + P++ R ++R F G
Sbjct: 1710 GKWVVSYFWVTQSIKERKMLNEHDFEVRGDVV---NGRNHQGPKRARESQDRK---IFRG 1763
Query: 1048 MRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDLWV 1106
+ I YG P D L+ +V+ +++ +T L +GV VV P D W
Sbjct: 1764 LEICCYGPFTNMPTDQLEWIVQLCGASVVKELSSFT--LGTGVHPIVVVQP-----DAWT 1816
Query: 1107 QEFLKHEI------PCVVADYLVEFV 1126
++ H I P V +++++ V
Sbjct: 1817 EDNGFHAIGQMCEAPVVTREWVLDSV 1842
>sp|Q92794|KAT6A_HUMAN Histone acetyltransferase KAT6A OS=Homo sapiens GN=KAT6A PE=1 SV=2
Length = 2004
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 1174 ITCQACG-CSDRG---EVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
I C+ C C D+G + ML C C G H++CCDPPL +P+ W C C
Sbjct: 260 IECKTCSSCRDQGKNADNMLFCD------SCDRGFHMECCDPPLTRMPKGMWICQIC 310
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 1176 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
C+ C E M++C GC G H C P L++VP+ DWFCP C
Sbjct: 1152 CKICRKKGDAENMVLCD------GCDRGHHTYCVRPKLKAVPDGDWFCPEC 1196
>sp|Q8WYB5|KAT6B_HUMAN Histone acetyltransferase KAT6B OS=Homo sapiens GN=KAT6B PE=1 SV=3
Length = 2073
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 1175 TCQACGCSDR-GEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
TC AC R + ML C C G H++CCDPPL +P+ W C C
Sbjct: 271 TCSACRVQGRNADNMLFCD------SCDRGFHMECCDPPLSRMPKGMWICQVC 317
>sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1
Length = 793
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 1175 TCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEED-WFCPTC 1226
C CG + L+C + C + HI C DPPL SVP ED W+CP C
Sbjct: 317 ACHLCGGRQDPDKQLMCDE------CDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
>sp|Q8BZ21|KAT6A_MOUSE Histone acetyltransferase KAT6A OS=Mus musculus GN=Kat6a PE=1 SV=2
Length = 2003
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 1174 ITCQACG-CSDRG---EVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
I C+ C C D+G + ML C C G H++CCDPPL +P+ W C C
Sbjct: 260 IECKTCSSCRDQGKNADNMLFCD------SCDRGFHMECCDPPLTRMPKGMWICQIC 310
>sp|Q5TKR9|KAT6A_RAT Histone acetyltransferase KAT6A OS=Rattus norvegicus GN=Kat6a PE=2
SV=2
Length = 1998
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 1174 ITCQACG-CSDRG---EVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
I C+ C C D+G + ML C C G H++CCDPPL +P+ W C C
Sbjct: 260 IECKTCSSCRDQGKNADNMLFCD------SCDRGFHMECCDPPLTRMPKGMWICQIC 310
>sp|Q9GKK8|BRCA1_PANTR Breast cancer type 1 susceptibility protein homolog OS=Pan
troglodytes GN=BRCA1 PE=2 SV=2
Length = 1863
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 933 FILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAAAS 987
++SG L +EF +V + + ++ + + TH + RT K+F A
Sbjct: 1652 MVVSG--LTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAG 1709
Query: 988 GRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHG 1047
G+W++ +++ + K L E +E + + N + P++ R ++R F G
Sbjct: 1710 GKWVVSYFWVTQSIKERKMLNEHDFEVRGDVV---NGRNHQGPKRARESQDRK---IFRG 1763
Query: 1048 MRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDLWV 1106
+ I YG P D L+ +V+ +++ +T L +GV VV P D W
Sbjct: 1764 LEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFT--LGTGVHPIVVVQP-----DAWT 1816
Query: 1107 QEFLKHEI------PCVVADYLVEFV 1126
++ H I P V +++++ V
Sbjct: 1817 EDNGFHAIGQMCEAPVVTREWVLDSV 1842
>sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1 SV=2
Length = 782
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 1173 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESV-PEEDWFCPTC 1226
K C CG + E L+C + C + H+ C PPL SV PE +W+CP+C
Sbjct: 320 KCACHVCGGREAPEKQLLCDE------CDMAFHLYCLKPPLTSVPPEPEWYCPSC 368
>sp|P38398|BRCA1_HUMAN Breast cancer type 1 susceptibility protein OS=Homo sapiens GN=BRCA1
PE=1 SV=2
Length = 1863
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 933 FILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAAAS 987
++SG L +EF +V + + ++ + + TH + RT K+F A
Sbjct: 1652 MVVSG--LTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAG 1709
Query: 988 GRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHG 1047
G+W++ +++ + K L E +E + + N + P++ R ++R F G
Sbjct: 1710 GKWVVSYFWVTQSIKERKMLNEHDFEVRGDVV---NGRNHQGPKRARESQDRK---IFRG 1763
Query: 1048 MRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDLWV 1106
+ I YG P D L+ +V+ +++ +T L +GV VV P D W
Sbjct: 1764 LEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFT--LGTGVHPIVVVQP-----DAWT 1816
Query: 1107 QEFLKHEI------PCVVADYLVEFV 1126
++ H I P V +++++ V
Sbjct: 1817 EDNGFHAIGQMCEAPVVTREWVLDSV 1842
>sp|Q8WML3|KAT6B_MACFA Histone acetyltransferase KAT6B OS=Macaca fascicularis GN=KAT6B PE=2
SV=1
Length = 1784
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 1175 TCQACGCSDR-GEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
TC AC R + ML C C G H++CCDPPL +P+ W C C
Sbjct: 271 TCSACRVQGRNADNMLFCD------SCDRGFHMECCDPPLSRMPKGMWICQVC 317
>sp|Q864U1|BRCA1_BOVIN Breast cancer type 1 susceptibility protein homolog OS=Bos taurus
GN=BRCA1 PE=1 SV=1
Length = 1849
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 931 IWFILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIA---PEI--RRTEKFFAAA 985
+ + SG L KE +V + + ++ + + TH I PE RT K+F
Sbjct: 1643 LSMVASG--LTPKELMLVQKFARKHHVTLTNLITEETTHVIMKTDPEFVCERTLKYFLGI 1700
Query: 986 ASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAF 1045
A G+W++ +++ + GK L E +E + + N + P++ R R++ F
Sbjct: 1701 AGGKWVVSYFWVTQSIKEGKMLDEHDFEVRGDVV---NGRNHQGPKRARESRDK---KIF 1754
Query: 1046 HGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDL 1104
G+ I YG P D L+ +V+ +++ +T + G VV P D
Sbjct: 1755 KGLEICCYGPFTNMPTDQLEWMVQLCGASVVKEPSSFTP--DQGTHPVVVVQP-----DA 1807
Query: 1105 WVQEFLKH------EIPCVVADYLVEFV 1126
W ++ H E P V +++++ V
Sbjct: 1808 WTEDAGFHVIGQMCEAPVVTREWVLDSV 1835
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 11/62 (17%)
Query: 1176 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPL--ESVPEEDWFCPTCTRSRINP 1233
C ACG G + IC + GC H+ C +PPL E++PE WFC TC+ +P
Sbjct: 120 CSACG----GRGLFICCE-----GCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSHHP 170
Query: 1234 SK 1235
K
Sbjct: 171 PK 172
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 1173 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCT 1227
K C C D E ML+C GC H C PPL S+P+ +W CP C
Sbjct: 448 KYICHICNRGDVEESMLLCD------GCDDSYHTFCLLPPLTSIPKGEWLCPRCV 496
>sp|Q95153|BRCA1_CANFA Breast cancer type 1 susceptibility protein homolog OS=Canis
familiaris GN=BRCA1 PE=3 SV=1
Length = 1878
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 26/210 (12%)
Query: 931 IWFILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAA 985
I + SG L KEF +V + + ++ S + TH I RT K+F
Sbjct: 1653 ISMVASG--LTPKEFMLVHKFARKHHISLTNLISEETTHVIMKTDAEFVCERTLKYFLGI 1710
Query: 986 ASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHG-- 1043
A G+W++ +++ + K L E +E + + N + P++ R ++R
Sbjct: 1711 AGGKWVVSYFWVTQSIKERKILDEHDFEVRGDVV---NGRNHQGPKRARESQDRESQDRK 1767
Query: 1044 AFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRV 1102
F G+ I YG P D L+ +V +++ +T L+ G VV P
Sbjct: 1768 IFRGLEICCYGPFTNMPTDQLEWMVHLCGASVVKEPSLFT--LSKGTHPVVVVQP----- 1820
Query: 1103 DLWVQEFLKHEI------PCVVADYLVEFV 1126
D W ++ H I P V +++++ V
Sbjct: 1821 DAWTEDSGFHAIGQMCEAPVVTREWVLDSV 1850
>sp|F6UA42|UHRF1_XENTR E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1 PE=3
SV=2
Length = 775
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 1175 TCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPE-EDWFCPTC 1226
C CG E L+C DE C + HI C PPL ++P+ EDW+CP C
Sbjct: 317 ACYVCGGKQDPEKQLLC-DE-----CDMAFHIYCLKPPLSAIPQDEDWYCPDC 363
>sp|Q8BRB7|KAT6B_MOUSE Histone acetyltransferase KAT6B OS=Mus musculus GN=Kat6b PE=2 SV=3
Length = 1872
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 1175 TCQACGCSDR-GEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1226
TC AC + + ML C C G H++CCDPPL +P+ W C C
Sbjct: 272 TCSACRVQGKNADNMLFCD------SCDRGFHMECCDPPLSRMPKGMWICQVC 318
>sp|Q9QZH2|BARD1_RAT BRCA1-associated RING domain protein 1 OS=Rattus norvegicus GN=Bard1
PE=2 SV=1
Length = 768
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 927 KDEPIWFILSGHRLQRKEFQVVIRH-LKGRLCRDSHQWSYQATHFIAP--EIRRTEKFFA 983
K P+ I SG Q+++ + LK + C ++ TH I P E + T K
Sbjct: 557 KSGPLVLIGSGLSSQQQKLLSKLETVLKAKKCA---EFDNTVTHVIVPDEEAQSTLKCML 613
Query: 984 AAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHG 1043
+G W+LK D++ AC + + EE YE P++ RL RE+
Sbjct: 614 GILNGCWVLKFDWVKACLDSQEREQEEKYEVPG------------GPQRSRLNREQLLPK 661
Query: 1044 AFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSP 1080
F G + G+ P + L +++ A G IL+ P
Sbjct: 662 LFDGCYFFLGGNFKHHPKEDLLKLIAAAGGRILSRKP 698
>sp|B6CHA3|UHRF1_XENLA E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2
SV=1
Length = 772
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 12/63 (19%)
Query: 1170 DTDKITCQACGCSDRG-----EVMLICGDESGSVGCGVGMHIDCCDPPLESVPE-EDWFC 1223
D K C+ C C G E L+C + C + HI C PPL +P+ EDW+C
Sbjct: 305 DNPKRACRMCACCICGGKQDPEKQLLCDE------CDLAFHIYCLKPPLSVIPQDEDWYC 358
Query: 1224 PTC 1226
P C
Sbjct: 359 PDC 361
>sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1
Length = 786
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 1175 TCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESV-PEEDWFCPTC 1226
C CG + L+C DE C + HI C PPL SV PEE+W+CP C
Sbjct: 321 ACHVCGGKQDPDKQLMC-DE-----CDMAFHIYCLRPPLSSVPPEEEWYCPDC 367
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 1157 EEIVMDLTPPNDYDTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESV 1216
EE+ DL +D+ + C+ C D GE L+C D C HI C +PPL +
Sbjct: 435 EEVGGDLEEEDDHHME--FCRVC--KDGGE--LLCCD-----TCPSSYHIHCLNPPLPEI 483
Query: 1217 PEEDWFCPTCT 1227
P +W CP CT
Sbjct: 484 PNGEWLCPRCT 494
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 1162 DLTPPNDYDTD-KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEED 1220
++T + Y+TD + C+ C +G +++C C H+ C DP +E PE
Sbjct: 358 EVTAVDGYETDHQDYCEVC---QQGGEIILCDT------CPRAYHMVCLDPDMEKAPEGK 408
Query: 1221 WFCPTCTRSRIN 1232
W CP C + I
Sbjct: 409 WSCPHCEKEGIQ 420
>sp|Q6J6I9|BRCA1_MACMU Breast cancer type 1 susceptibility protein homolog OS=Macaca mulatta
GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 27/206 (13%)
Query: 933 FILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAAAS 987
++SG L +EF +V + + ++ S + TH + RT K+F A
Sbjct: 1652 LVVSG--LTPEEFMLVYKFARRYHIALTNLISEETTHVVMKTDAEFVCERTLKYFLGIAG 1709
Query: 988 GRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHG 1047
G+W++ +++ + K L E +E + + N + P++ RE F G
Sbjct: 1710 GKWVVSYFWVTQSIKERKMLNEHDFEVRGDVV---NGRNHQGPKR---ARESPDRKIFRG 1763
Query: 1048 MRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDLWV 1106
+ I YG P D L+ +V+ +++ +T L +G VV P D W
Sbjct: 1764 LEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFT--LGTGFHPIVVVQP-----DAWT 1816
Query: 1107 QEFLKHEI------PCVVADYLVEFV 1126
++ H I P V +++++ V
Sbjct: 1817 EDNGFHAIGQMCEAPVVTREWVLDSV 1842
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,535,602
Number of Sequences: 539616
Number of extensions: 21305356
Number of successful extensions: 54312
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 407
Number of HSP's that attempted gapping in prelim test: 53314
Number of HSP's gapped (non-prelim): 1306
length of query: 1239
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1110
effective length of database: 121,958,995
effective search space: 135374484450
effective search space used: 135374484450
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)