BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000880
(1239 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 153/286 (53%), Gaps = 40/286 (13%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
S RY +DFEE+ LG G FG VV +N LD R+YA+KKIR ++ L IL EV L+
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---ILSEVMLLA 57
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L HQ+VVRYY AW E R +T + K + L
Sbjct: 58 SLNHQYVVRYYAAWLE------------------------RRNFVKPMTAVKKK---STL 90
Query: 539 YIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+IQMEYC RTL + S + + ++ W LFRQI+E L++IH QGIIHRDL P NIF D
Sbjct: 91 FIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID 150
Query: 597 ARNDIKIGDFGLAKFL--KLEQLDQDAA-FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
++KIGDFGLAK + L+ L D+ P Y A E+ G
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA----MYVATEVLDGTG 206
Query: 654 KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKG-ELPPSW 698
+EK DMYSLGI+FFE+ +PFST MER +L L+ E PP +
Sbjct: 207 HYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDF 252
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 152/286 (53%), Gaps = 40/286 (13%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
S RY +DFEE+ LG G FG VV +N LD R+YA+KKIR ++ L IL EV L+
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---ILSEVMLLA 57
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L HQ+VVRYY AW E R +T + K + L
Sbjct: 58 SLNHQYVVRYYAAWLE------------------------RRNFVKPMTAVKKK---STL 90
Query: 539 YIQMEYCPR-TLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+IQMEYC TL + S + + ++ W LFRQI+E L++IH QGIIHRDL P NIF D
Sbjct: 91 FIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID 150
Query: 597 ARNDIKIGDFGLAKFL--KLEQLDQDAA-FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
++KIGDFGLAK + L+ L D+ P Y A E+ G
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA----MYVATEVLDGTG 206
Query: 654 KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKG-ELPPSW 698
+EK DMYSLGI+FFE+ +PFST MER +L L+ E PP +
Sbjct: 207 HYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDF 252
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 176 bits (446), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 149/286 (52%), Gaps = 40/286 (13%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
S RY +DFEE+ LG G FG VV +N LD R+YA+KKIR ++ L IL EV L+
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---ILSEVXLLA 57
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L HQ+VVRYY AW E R T + K + L
Sbjct: 58 SLNHQYVVRYYAAWLE------------------------RRNFVKPXTAVKKK---STL 90
Query: 539 YIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+IQ EYC RTL + S + + ++ W LFRQI+E L++IH QGIIHR+L P NIF D
Sbjct: 91 FIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFID 150
Query: 597 ARNDIKIGDFGLAKFL--KLEQLDQDAA-FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
++KIGDFGLAK + L+ L D+ P Y A E+ G
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAX----YVATEVLDGTG 206
Query: 654 KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKG-ELPPSW 698
+EK D YSLGI+FFE +PFST ER +L L+ E PP +
Sbjct: 207 HYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSIEFPPDF 252
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 163 bits (413), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 170/337 (50%), Gaps = 33/337 (9%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
+SRYL DFE +Q +G GGFG V KNK+D +YA+K+IRL ++ L ++++REV L+
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALA 59
Query: 479 RLQHQHVVRYYQAWFETGVADF--DGDSMW------------GSGTLASSTFSNR--AAS 522
+L+H +VRY+ AW ET + + D +W S A S R S
Sbjct: 60 KLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS 119
Query: 523 SADVTGQ-ENKLESTYLYIQMEYCPR-------TLRQVFESYDHFDKELAWHLFRQIVEG 574
+ + GQ + YLYIQM+ C + R E +H + H+F QI E
Sbjct: 120 TKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH---GVCLHIFIQIAEA 176
Query: 575 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXX 634
+ +H +G++HRDL P+NIFF + +K+GDFGL + ++ +Q P
Sbjct: 177 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ 236
Query: 635 XXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGEL 694
Y +PE G K D++SLG++ FEL + FST MER +++D++ +
Sbjct: 237 VGTK---LYMSPEQIHG-NNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNL-KF 291
Query: 695 PPSWVAKFSEQEXXXXXXXXXXXXXXXXATELLQDAL 731
P + K+ ++ AT+++++A+
Sbjct: 292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAI 328
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 148/286 (51%), Gaps = 38/286 (13%)
Query: 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 480
RYL DFE +Q LG GGFG V KNK+D +YA+K+IRL ++ L ++++REV L++L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALAKL 60
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
+H +VRY+ AW E +T SS V YLYI
Sbjct: 61 EHPGIVRYFNAWLE------------------KNTTEKLQPSSPKV----------YLYI 92
Query: 541 QMEYCPR-TLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
QM+ C + L+ + + ++ + H+F QI E + +H +G++HRDL P+NIFF
Sbjct: 93 QMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT 152
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
+ +K+GDFGL + ++ +Q P Y +PE G
Sbjct: 153 MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTK---LYMSPEQIHG-NSYS 208
Query: 657 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKF 702
K D++SLG++ FEL +PFST MER L+D++ + PP + K+
Sbjct: 209 HKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNL-KFPPLFTQKY 253
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 135/274 (49%), Gaps = 41/274 (14%)
Query: 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 480
R+ DF+E++ +G GGFG V K+++DG+ Y +++++ N++ REV L++L
Sbjct: 9 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYN------NEKAEREVKALAKL 62
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H ++V Y W FD D +L SS + + ++ ++ ++ L+I
Sbjct: 63 DHVNIVHYNGCW-----DGFDYDPETSDDSLESSDYDPENSKNS------SRSKTKCLFI 111
Query: 541 QMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
QME+C + TL Q E + DK LA LF QI +G+ +IH + +IHRDL P+NIF
Sbjct: 112 QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD 171
Query: 598 RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE--IEQGWPKI 655
+KIGDFGL LK Y +PE Q + K
Sbjct: 172 TKQVKIGDFGLVTSLK----------------NDGKRTRSKGTLRYMSPEQISSQDYGK- 214
Query: 656 DEKADMYSLGIVFFELWHPFSTAMERQIVLSDLK 689
+ D+Y+LG++ EL H TA E +DL+
Sbjct: 215 --EVDLYALGLILAELLHVCDTAFETSKFFTDLR 246
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 54/274 (19%)
Query: 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 480
R+ DF+E++ +G GGFG V K+++DG+ Y +K+++ N++ REV L++L
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN------NEKAEREVKALAKL 61
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H ++V Y W FD D SS S+R+ + L+I
Sbjct: 62 DHVNIVHYNGCW-----DGFDYDPE------TSSKNSSRSKTKC-------------LFI 97
Query: 541 QMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
QME+C + TL Q E + DK LA LF QI +G+ +IH + +I+RDL P+NIF
Sbjct: 98 QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD 157
Query: 598 RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE--IEQGWPKI 655
+KIGDFGL LK + Y +PE Q + K
Sbjct: 158 TKQVKIGDFGLVTSLKND----------------GKRXRSKGTLRYMSPEQISSQDYGK- 200
Query: 656 DEKADMYSLGIVFFELWHPFSTAMERQIVLSDLK 689
+ D+Y+LG++ EL H TA E +DL+
Sbjct: 201 --EVDLYALGLILAELLHVCDTAFETSKFFTDLR 232
>pdb|4G84|A Chain A, Crystal Structure Of Human Hisrs
pdb|4G84|B Chain B, Crystal Structure Of Human Hisrs
Length = 464
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 215/457 (47%), Gaps = 51/457 (11%)
Query: 790 YSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMY-----LLGDCPQFKRNTVKLLTHGGD 844
YS +R+ V V F++H A+ ++ P++ L+G + + L GG+
Sbjct: 23 YSPRQMAVREKVFDVIIRCFKRHGAEVIDT-PVFELKETLMGKYGEDSKLIYDLKDQGGE 81
Query: 845 LLELSHELRLPFIRWAISNQKSSFKRYEISSVYRR---AIGHSPPNRYLQGDFDIIGGAS 901
LL L ++L +PF R+ N+ ++ KRY I+ VYRR A+ + Q DFDI G
Sbjct: 82 LLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFD 141
Query: 902 ALT-EAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMG 960
+ +AE LK+ +I++ + + +N +L+ +++ G+ + + +
Sbjct: 142 PMIPDAECLKIMCEILSSLQIGDFL-VKVNDRRILDGMFAICGVSDSKFRTICSSVDKLD 200
Query: 961 SLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAA--DQAL--PRLRGAL 1016
K W ++ +++ E LA V +R+ + G + +Q L P+L
Sbjct: 201 ---------KVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKL---- 247
Query: 1017 PADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATL 1071
+K + L +L YL ++ I+ I D + Y+ + ++ +V + PA
Sbjct: 248 SQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYE--AVLLQTPAQA 305
Query: 1072 VEGTL----LAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKP 1127
E L +A GGRYD L+ M+D + R P VG S+ +E I +
Sbjct: 306 GEEPLGVGSVAAGGRYDGLVG-MFDPK-----GRKVPC--VGLSIGVERIFSIVEQRLEA 357
Query: 1128 VRNEAGTS---VLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEH 1184
+ + T+ VLV S LL ER++LV+ELW+ IKA+ + +P L Q +Y E
Sbjct: 358 LEEKIRTTETQVLVAS-AQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEA 416
Query: 1185 DIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLV 1221
I + I+ + + G++K+R + ++E +V+RE LV
Sbjct: 417 GIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLV 453
>pdb|4G85|A Chain A, Crystal Structure Of Human Hisrs
pdb|4G85|B Chain B, Crystal Structure Of Human Hisrs
Length = 517
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 215/457 (47%), Gaps = 51/457 (11%)
Query: 790 YSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMY-----LLGDCPQFKRNTVKLLTHGGD 844
YS +R+ V V F++H A+ ++ P++ L+G + + L GG+
Sbjct: 76 YSPRQMAVREKVFDVIIRCFKRHGAEVIDT-PVFELKETLMGKYGEDSKLIYDLKDQGGE 134
Query: 845 LLELSHELRLPFIRWAISNQKSSFKRYEISSVYRR---AIGHSPPNRYLQGDFDIIGGAS 901
LL L ++L +PF R+ N+ ++ KRY I+ VYRR A+ + Q DFDI G
Sbjct: 135 LLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFD 194
Query: 902 ALT-EAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMG 960
+ +AE LK+ +I++ + + +N +L+ +++ G+ + + +
Sbjct: 195 PMIPDAECLKIMCEILSSLQIGDFL-VKVNDRRILDGMFAICGVSDSKFRTICSSVDKLD 253
Query: 961 SLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAA--DQAL--PRLRGAL 1016
K W ++ +++ E LA V +R+ + G + +Q L P+L
Sbjct: 254 ---------KVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKL---- 300
Query: 1017 PADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATL 1071
+K + L +L YL ++ I+ I D + Y+ + ++ +V + PA
Sbjct: 301 SQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYE--AVLLQTPAQA 358
Query: 1072 VEGTL----LAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKP 1127
E L +A GGRYD L+ M+D + R P VG S+ +E I +
Sbjct: 359 GEEPLGVGSVAAGGRYDGLVG-MFDPK-----GRKVPC--VGLSIGVERIFSIVEQRLEA 410
Query: 1128 VRNEAGTS---VLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEH 1184
+ + T+ VLV S LL ER++LV+ELW+ IKA+ + +P L Q +Y E
Sbjct: 411 LEEKIRTTETQVLVAS-AQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEA 469
Query: 1185 DIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLV 1221
I + I+ + + G++K+R + ++E +V+RE LV
Sbjct: 470 GIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLV 506
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 126/307 (41%), Gaps = 91/307 (29%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 467
VD G+ N+ S + + LQ +G G FG +L K+ DGR Y +K+I + S
Sbjct: 11 VDLGTENLYFQS---MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER 67
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ REVA L+ ++H ++V+Y +++ E G
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGS------------------------------ 97
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHF-------------DKELAWHLFRQIVEG 574
LYI M+YC E D F D+ L W F QI
Sbjct: 98 ----------LYIVMDYC--------EGGDLFKRINAQKGVLFQEDQILDW--FVQICLA 137
Query: 575 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK--LEQLDQDAAFPXXXXXXXX 632
L H+H + I+HRD+ NIF +++GDFG+A+ L +E P
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTP-------- 189
Query: 633 XXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLK 689
+Y +PEI + P + K+D+++LG V +EL H F + +VL +
Sbjct: 190 ---------YYLSPEICENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII- 238
Query: 690 QKGELPP 696
G PP
Sbjct: 239 -SGSFPP 244
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 131/325 (40%), Gaps = 69/325 (21%)
Query: 387 FNQVFHQKMVSSRVSQFWKPSVDSGSPNM--SLPSSRYLNDFEELQPLGHGGFGHVVLCK 444
+ Q HQ + RVS + S SP S P S + F+ L LGHG +G V +
Sbjct: 19 YFQSMHQ-LQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVR 77
Query: 445 NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGD 503
+K DGR YAVK+ + R L EV + ++ QH VR QAW E G+
Sbjct: 78 SKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI------ 131
Query: 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKE 562
LY+Q E C +L+Q E++ +
Sbjct: 132 ----------------------------------LYLQTELCGPSLQQHCEAWGASLPEA 157
Query: 563 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA 622
W R + LAH+H QG++H D+ P NIF R K+GDFGL L +L A
Sbjct: 158 QVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL-----LVELGTAGA 212
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQ 682
Y APE+ QG AD++SLG+ E+ + ME
Sbjct: 213 GEVQEGDPR-----------YMAPELLQG--SYGTAADVFSLGLTILEV----ACNMELP 255
Query: 683 IVLSDLKQ--KGELPPSWVAKFSEQ 705
+Q +G LPP + A S +
Sbjct: 256 HGGEGWQQLRQGYLPPEFTAGLSSE 280
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 67/298 (22%)
Query: 411 GSPNMSLPSSR--YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVN 467
+P M + S + + ++ + LG G FG V+LCK+K+ G+ AVK I + K
Sbjct: 11 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK 70
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ +LREV L +L H ++++ Y+ + + G G+ ++ G L S + S D
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE-VYTGGELFDEIISRKRFSEVD-- 127
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
A + RQ++ G+ ++H I+HRD
Sbjct: 128 ------------------------------------AARIIRQVLSGITYMHKNKIVHRD 151
Query: 588 LTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYT 644
L P N+ ++++ +I+I DFGL+ + + +D +Y
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA----------------YYI 195
Query: 645 APEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSW 698
APE+ G DEK D++S G++ + L PF+ A E I+ K K P W
Sbjct: 196 APEVLHG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 117/275 (42%), Gaps = 65/275 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQ 490
LG G FG V+LCK+K+ G+ AVK I + K + +LREV L +L H ++++ Y+
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ + G G+ ++ G L S + S D
Sbjct: 100 FFEDKGYFYLVGE-VYTGGELFDEIISRKRFSEVD------------------------- 133
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFG 607
A + RQ++ G+ ++H I+HRDL P N+ ++++ +I+I DFG
Sbjct: 134 -------------AARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG 180
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
L+ + + +D +Y APE+ G DEK D++S G++
Sbjct: 181 LSTHFEASKKMKDKIGTA----------------YYIAPEVLHG--TYDEKCDVWSTGVI 222
Query: 668 FFELWH---PFSTAMERQIVLSDLKQKGELP-PSW 698
+ L PF+ A E I+ K K P W
Sbjct: 223 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 257
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 67/298 (22%)
Query: 411 GSPNMSLPSSR--YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVN 467
+P M + S + + ++ + LG G FG V+LCK+K+ G+ AVK I + K
Sbjct: 34 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK 93
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ +LREV L +L H ++++ Y+ + + G G+ ++ G L S + S D
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE-VYTGGELFDEIISRKRFSEVD-- 150
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
A + RQ++ G+ ++H I+HRD
Sbjct: 151 ------------------------------------AARIIRQVLSGITYMHKNKIVHRD 174
Query: 588 LTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYT 644
L P N+ ++++ +I+I DFGL+ + + +D +Y
Sbjct: 175 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA----------------YYI 218
Query: 645 APEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSW 698
APE+ G DEK D++S G++ + L PF+ A E I+ K K P W
Sbjct: 219 APEVLHG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 274
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 67/298 (22%)
Query: 411 GSPNMSLPSSR--YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVN 467
+P M + S + + ++ + LG G FG V+LCK+K+ G+ AVK I + K
Sbjct: 35 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK 94
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ +LREV L +L H ++++ Y+ + + G G+ ++ G L S + S D
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE-VYTGGELFDEIISRKRFSEVD-- 151
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
A + RQ++ G+ ++H I+HRD
Sbjct: 152 ------------------------------------AARIIRQVLSGITYMHKNKIVHRD 175
Query: 588 LTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYT 644
L P N+ ++++ +I+I DFGL+ + + +D +Y
Sbjct: 176 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA----------------YYI 219
Query: 645 APEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSW 698
APE+ G DEK D++S G++ + L PF+ A E I+ K K P W
Sbjct: 220 APEVLHG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 275
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 115/275 (41%), Gaps = 65/275 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQ 490
LG G FG V+LCK+K+ G+ AVK I + K + +LREV L +L H ++ + Y+
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ + G G+ ++ G L S + S D
Sbjct: 94 FFEDKGYFYLVGE-VYTGGELFDEIISRKRFSEVD------------------------- 127
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFG 607
A + RQ++ G+ + H I+HRDL P N+ ++++ +I+I DFG
Sbjct: 128 -------------AARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFG 174
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
L+ + + +D +Y APE+ G DEK D++S G++
Sbjct: 175 LSTHFEASKKXKDKIGTA----------------YYIAPEVLHG--TYDEKCDVWSTGVI 216
Query: 668 FFELWH---PFSTAMERQIVLSDLKQKGELP-PSW 698
+ L PF+ A E I+ K K P W
Sbjct: 217 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 59/258 (22%)
Query: 417 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 476
L S ++ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++
Sbjct: 3 LGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL 62
Query: 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 536
L L H ++V+ DV ENK
Sbjct: 63 LKELNHPNIVKLL-----------------------------------DVIHTENK---- 83
Query: 537 YLYIQMEYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
LY+ E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+
Sbjct: 84 -LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNL 141
Query: 594 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
+ IK+ DFGLA+ + +Y APEI G
Sbjct: 142 LINTEGAIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCK 186
Query: 654 KIDEKADMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 187 YYSTAVDIWSLGCIFAEM 204
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 72/300 (24%)
Query: 411 GSPNMSLPSSR-YLND-FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 468
+P M + S + +L++ ++ ++ LG G +G V+LC++K+ A+K IR S N
Sbjct: 22 ATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS 81
Query: 469 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 528
++L EVA L L H ++++ Y +FE
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYD-FFE---------------------------------- 106
Query: 529 QENKLESTYLYIQMEYCPRTLRQVFESYDH---FDKELAWHLFRQIVEGLAHIHGQGIIH 585
+ Y+ ME C + ++F+ H F++ A + +Q++ G+ ++H I+H
Sbjct: 107 -----DKRNYYLVME-CYKG-GELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVH 159
Query: 586 RDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYF 642
RDL P N+ +++ IKI DFGL+ A F +
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLS-----------AVFENQKKMKERLGTA-----Y 203
Query: 643 YTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL-PPSW 698
Y APE+ + K DEK D++S+G++ F L + PF +++I+ K K P W
Sbjct: 204 YIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW 261
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 59/258 (22%)
Query: 417 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 476
L S ++ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++
Sbjct: 3 LGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL 62
Query: 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 536
L L H ++V+ DV ENK
Sbjct: 63 LKELNHPNIVKLL-----------------------------------DVIHTENK---- 83
Query: 537 YLYIQMEYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
LY+ E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+
Sbjct: 84 -LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNL 141
Query: 594 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
+ IK+ DFGLA+ + +Y APEI G
Sbjct: 142 LINTEGAIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGXK 186
Query: 654 KIDEKADMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 187 YYSTAVDIWSLGCIFAEM 204
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 67/272 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D+E L +G G +G + K DG+ K++ + ++ EV L L+H +
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+VRYY +R + T LYI MEY
Sbjct: 67 IVRYY----------------------------DRIIDRTNTT----------LYIVMEY 88
Query: 545 C-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-----GQGIIHRDLTPNNIF 594
C + + + + D+E + Q+ L H G ++HRDL P N+F
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 595 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK 654
D + ++K+GDFGLA+ L+ D +F +Y +PE +
Sbjct: 149 LDGKQNVKLGDFGLARI-----LNHDTSFAKTFVGTP----------YYMSPE-QMNRMS 192
Query: 655 IDEKADMYSLGIVFFELWH---PFSTAMERQI 683
+EK+D++SLG + +EL PF+ ++++
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 67/272 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D+E L +G G +G + K DG+ K++ + ++ EV L L+H +
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+VRYY +R + T LYI MEY
Sbjct: 67 IVRYY----------------------------DRIIDRTNTT----------LYIVMEY 88
Query: 545 C-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-----GQGIIHRDLTPNNIF 594
C + + + + D+E + Q+ L H G ++HRDL P N+F
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 595 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK 654
D + ++K+GDFGLA+ L+ D +F +Y +PE +
Sbjct: 149 LDGKQNVKLGDFGLARI-----LNHDTSFAKAFVGTP----------YYMSPE-QMNRMS 192
Query: 655 IDEKADMYSLGIVFFELWH---PFSTAMERQI 683
+EK+D++SLG + +EL PF+ ++++
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 56/250 (22%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +E+L+ +G G +G V KN+ A+K++RL D V LRE+ L L+H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+++VR + DV + KL +
Sbjct: 61 KNIVRLH-----------------------------------DVLHSDKKLTLVF----- 80
Query: 543 EYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
E+C + L++ F+S + D E+ Q+++GL H + ++HRDL P N+ + ++
Sbjct: 81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGEL 140
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
K+ DFGLA+ + A +Y P++ G DM
Sbjct: 141 KLADFGLARAFGIPVRCYSAEV---------------VTLWYRPPDVLFGAKLYSTSIDM 185
Query: 662 YSLGIVFFEL 671
+S G +F EL
Sbjct: 186 WSAGCIFAEL 195
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 60/256 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 480
L +E + +G GGF V L + L G A+K + DK+ +D RI E+ L L
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIK---IMDKNTLGSDLPRIKTEIEALKNL 65
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
+HQH+ + Y ET NK+ ++
Sbjct: 66 RHQHICQLYHV-LETA----------------------------------NKI-----FM 85
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+EYCP L S D +E +FRQIV +A++H QG HRDL P N+ FD +
Sbjct: 86 VLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYH 145
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
+K+ DFGL A P Y APE+ QG + +A
Sbjct: 146 KLKLIDFGL------------CAKPKGNKDYHLQTCCGSLA--YAAPELIQGKSYLGSEA 191
Query: 660 DMYSLGIVFFELWHPF 675
D++S+GI+ + L F
Sbjct: 192 DVWSMGILLYVLMCGF 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 119/282 (42%), Gaps = 65/282 (23%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND-RILREVATLSRLQHQH 484
++ ++ LG G +G V+LCK+KL G A+K I+ + N +L EVA L +L H +
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+++ Y+ +FE + ++ G L
Sbjct: 66 IMKLYE-FFEDKRNYYLVMEVYRGGELFDEII---------------------------- 96
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---I 601
LRQ F D A + +Q++ G ++H I+HRDL P N+ ++++ I
Sbjct: 97 ----LRQKFSEVD------AAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALI 146
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGL+ ++ +Y APE+ + K DEK D+
Sbjct: 147 KIVDFGLSAHFEV----------------GGKMKERLGTAYYIAPEVLR--KKYDEKCDV 188
Query: 662 YSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL-PPSWV 699
+S G++ + L + PF +++I+ K K PP W
Sbjct: 189 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWT 230
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 119/281 (42%), Gaps = 65/281 (23%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND-RILREVATLSRLQHQH 484
++ ++ LG G +G V+LCK+KL G A+K I+ + N +L EVA L +L H +
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+++ Y+ +FE + ++ G L
Sbjct: 83 IMKLYE-FFEDKRNYYLVMEVYRGGELFDEII---------------------------- 113
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---I 601
LRQ F D A + +Q++ G ++H I+HRDL P N+ ++++ I
Sbjct: 114 ----LRQKFSEVD------AAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALI 163
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGL+ ++ +Y APE+ + K DEK D+
Sbjct: 164 KIVDFGLSAHFEV----------------GGKMKERLGTAYYIAPEVLR--KKYDEKCDV 205
Query: 662 YSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL-PPSW 698
+S G++ + L + PF +++I+ K K PP W
Sbjct: 206 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDW 246
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 63 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 82
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 83 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 141
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 142 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 187 DIWSLGCIFAEM 198
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 56/250 (22%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +E+L+ +G G +G V KN+ A+K++RL D V LRE+ L L+H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+++VR + DV + KL +
Sbjct: 61 KNIVRLH-----------------------------------DVLHSDKKLTLVF----- 80
Query: 543 EYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
E+C + L++ F+S + D E+ Q+++GL H + ++HRDL P N+ + ++
Sbjct: 81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGEL 140
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
K+ +FGLA+ + A +Y P++ G DM
Sbjct: 141 KLANFGLARAFGIPVRCYSAEV---------------VTLWYRPPDVLFGAKLYSTSIDM 185
Query: 662 YSLGIVFFEL 671
+S G +F EL
Sbjct: 186 WSAGCIFAEL 195
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 59/253 (23%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H ++V+ DV ENK LY+
Sbjct: 62 HPNIVKLL-----------------------------------DVIHTENK-----LYLV 81
Query: 542 MEYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 598
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 FEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTE 140
Query: 599 NDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEK 658
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 GAIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 659 ADMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 VDIWSLGCIFAEM 198
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 110/272 (40%), Gaps = 67/272 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D+E L +G G +G + K DG+ K++ + ++ EV L L+H +
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+VRYY +R + T LYI MEY
Sbjct: 67 IVRYY----------------------------DRIIDRTNTT----------LYIVMEY 88
Query: 545 C-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-----GQGIIHRDLTPNNIF 594
C + + + + D+E + Q+ L H G ++HRDL P N+F
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 595 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK 654
D + ++K+GDFGLA+ L+ D F +Y +PE +
Sbjct: 149 LDGKQNVKLGDFGLARI-----LNHDEDFAKEFVGTP----------YYMSPE-QMNRMS 192
Query: 655 IDEKADMYSLGIVFFELWH---PFSTAMERQI 683
+EK+D++SLG + +EL PF+ ++++
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 65 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 84
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 85 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 144 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 189 DIWSLGCIFAEM 200
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 64 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 83
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 84 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 142
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 143 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 188 DIWSLGCIFAEM 199
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 63 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 82
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 83 EFLSMDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPENLLINTEG 141
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 142 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 187 DIWSLGCIFAEM 198
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 65 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 84
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 85 EFLSMDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPENLLINTEG 143
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 144 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 189 DIWSLGCIFAEM 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 65 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 84
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 85 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 144 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 189 DIWSLGCIFAEM 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 61 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 80
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 81 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 140 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 185 DIWSLGCIFAEM 196
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 64 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 83
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 84 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 142
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 143 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 188 DIWSLGCIFAEM 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 63 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 82
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 83 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 141
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 142 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 187 DIWSLGCIFAEM 198
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 66 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 85
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 86 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 144
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 145 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 189
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 190 DIWSLGCIFAEM 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 61 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 80
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 81 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 140 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 185 DIWSLGCIFAEM 196
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGXKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 63 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 82
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 83 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPENLLINTEG 141
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 142 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 187 DIWSLGCIFAEM 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 66 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 85
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 86 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 144
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 145 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAV 189
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 190 DIWSLGCIFAEM 201
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 65 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 84
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 85 EHVDQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 144 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 189 DIWSLGCIFAEM 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 64 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 83
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 84 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPENLLINTEG 142
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 143 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 188 DIWSLGCIFAEM 199
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 111/279 (39%), Gaps = 53/279 (18%)
Query: 410 SGSPNMSLP---SSRYLNDFEELQPL-GHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 465
S P S+P S + D E++ L G G +GHV +KL+ R A+KKI + L
Sbjct: 35 SSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI 94
Query: 466 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 525
RILRE+A L+RL H HVV+ V FD
Sbjct: 95 DCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE----------------------- 131
Query: 526 VTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585
LY+ +E +++F + + + L ++ G+ ++H GI+H
Sbjct: 132 ------------LYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILH 179
Query: 586 RDLTPNNIFFDARNDIKIGDFGLAKF----------LKLEQLDQD---AAFPXXXXXXXX 632
RDL P N + +K+ DFGLA+ L + + D FP
Sbjct: 180 RDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQ 239
Query: 633 XXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+ Y APE+ E D++S+G +F EL
Sbjct: 240 LTGHVVTRW-YRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 61 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 80
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 81 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 140 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 185 DIWSLGCIFAEM 196
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 65 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 84
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ L+ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 85 EFLSMDLKDFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 144 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 189 DIWSLGCIFAEM 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 65 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 84
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L+ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 85 EFLHQDLKTFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 144 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 189 DIWSLGCIFAEM 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 59/250 (23%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
+F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+V+ DV ENKL Y+ E+
Sbjct: 63 IVKLL-----------------------------------DVIHTENKL-----YLVFEF 82
Query: 545 CPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
+ L++ ++ L +LF Q+++GLA H ++HRDL P N+ + I
Sbjct: 83 LHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI 141
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
K+ DFGLA+ + +Y APEI G D+
Sbjct: 142 KLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 662 YSLGIVFFEL 671
+SLG +F E+
Sbjct: 187 WSLGCIFAEM 196
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 64 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 83
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ L+ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 84 EFLSMDLKDFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 142
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 143 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 188 DIWSLGCIFAEM 199
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 61 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 80
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L+ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 81 EHVHQDLKTFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 140 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 185 DIWSLGCIFAEM 196
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L+ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKDFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPENLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENK LY+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENK-----LYLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GL+ H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLSFCHSHRVLHRDLKPQNLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+ KIRL ++ V +RE++ L L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENKL Y+
Sbjct: 62 PNIVKLL-----------------------------------DVIHTENKL-----YLVF 81
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 82 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 141 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 186 DIWSLGCIFAEM 197
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 59/252 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +F++++ +G G +G V +NKL G A+ KIRL ++ V +RE++ L L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ DV ENKL Y+
Sbjct: 61 PNIVKLL-----------------------------------DVIHTENKL-----YLVF 80
Query: 543 EYCPRTLRQVFESYDHFDKELAW---HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
E+ + L++ ++ L +LF Q+++GLA H ++HRDL P N+ +
Sbjct: 81 EFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APEI G
Sbjct: 140 AIKLADFGLARAFGVP---------------VRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 660 DMYSLGIVFFEL 671
D++SLG +F E+
Sbjct: 185 DIWSLGCIFAEM 196
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 63/259 (24%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
LG G FG V+ CK+++ + YAVK I ILREV L +L H ++++ ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 551
D S + G L TG E L+ ++ R+
Sbjct: 90 L-------EDSSSFYIVGEL--------------YTGGE-------LFDEI-----IKRK 116
Query: 552 VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGL 608
F +D A + +Q+ G+ ++H I+HRDL P NI +++ DIKI DFGL
Sbjct: 117 RFSEHD------AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
Query: 609 AKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
+ + +D +Y APE+ +G DEK D++S G++
Sbjct: 171 STCFQQNTKMKDRI----------------GTAYYIAPEVLRG--TYDEKCDVWSAGVIL 212
Query: 669 FELWH---PFSTAMERQIV 684
+ L PF E I+
Sbjct: 213 YILLSGTPPFYGKNEYDIL 231
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 68/260 (26%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 474
M++P ++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEI 56
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L H++VV++Y ++ E
Sbjct: 57 CINKMLNHENVVKFYG----------------------------------------HRRE 76
Query: 535 STYLYIQMEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDL 588
Y+ +EYC E +D + ++ A F Q++ G+ ++HG GI HRD+
Sbjct: 77 GNIQYLFLEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D R+++KI DFGLA + ++ Y APE+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPEL 178
Query: 649 EQGWPKIDEKADMYSLGIVF 668
+ E D++S GIV
Sbjct: 179 LKRREFHAEPVDVWSCGIVL 198
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 68/260 (26%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 474
M++P ++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEI 56
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
+ L H++VV++Y ++ E
Sbjct: 57 CINAMLNHENVVKFYG----------------------------------------HRRE 76
Query: 535 STYLYIQMEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDL 588
Y+ +EYC E +D + ++ A F Q++ G+ ++HG GI HRD+
Sbjct: 77 GNIQYLFLEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D R+++KI DFGLA + ++ Y APE+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPEL 178
Query: 649 EQGWPKIDEKADMYSLGIVF 668
+ E D++S GIV
Sbjct: 179 LKRREFHAEPVDVWSCGIVL 198
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 68/260 (26%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 474
M++P ++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEI 56
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L H++VV++Y ++ E
Sbjct: 57 CINKMLNHENVVKFYG----------------------------------------HRRE 76
Query: 535 STYLYIQMEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDL 588
Y+ +EYC E +D + ++ A F Q++ G+ ++HG GI HRD+
Sbjct: 77 GNIQYLFLEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D R+++KI DFGLA + ++ Y APE+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPEL 178
Query: 649 EQGWPKIDEKADMYSLGIVF 668
+ E D++S GIV
Sbjct: 179 LKRREFHAEPVDVWSCGIVL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 68/260 (26%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 474
M++P ++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEI 56
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L H++VV++Y ++ E
Sbjct: 57 CINKMLNHENVVKFYG----------------------------------------HRRE 76
Query: 535 STYLYIQMEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDL 588
Y+ +EYC E +D + ++ A F Q++ G+ ++HG GI HRD+
Sbjct: 77 GNIQYLFLEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D R+++KI DFGLA + ++ Y APE+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPEL 178
Query: 649 EQGWPKIDEKADMYSLGIVF 668
+ E D++S GIV
Sbjct: 179 LKRREFHAEPVDVWSCGIVL 198
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 68/260 (26%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 474
M++P ++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEI 56
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L H++VV++Y ++ E
Sbjct: 57 CINKMLNHENVVKFYG----------------------------------------HRRE 76
Query: 535 STYLYIQMEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDL 588
Y+ +EYC E +D + ++ A F Q++ G+ ++HG GI HRD+
Sbjct: 77 GNIQYLFLEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D R+++KI DFGLA + ++ Y APE+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPEL 178
Query: 649 EQGWPKIDEKADMYSLGIVF 668
+ E D++S GIV
Sbjct: 179 LKRREFHAEPVDVWSCGIVL 198
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 68/260 (26%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 474
M++P ++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEI 56
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L H++VV++Y ++ E
Sbjct: 57 CINKMLNHENVVKFYG----------------------------------------HRRE 76
Query: 535 STYLYIQMEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDL 588
Y+ +EYC E +D + ++ A F Q++ G+ ++HG GI HRD+
Sbjct: 77 GNIQYLFLEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D R+++KI DFGLA + ++ Y APE+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPEL 178
Query: 649 EQGWPKIDEKADMYSLGIVF 668
+ E D++S GIV
Sbjct: 179 LKRREFHAEPVDVWSCGIVL 198
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 68/260 (26%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 474
M++P ++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEI 56
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L H++VV++Y ++ E
Sbjct: 57 CINKMLNHENVVKFYG----------------------------------------HRRE 76
Query: 535 STYLYIQMEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDL 588
Y+ +EYC E +D + ++ A F Q++ G+ ++HG GI HRD+
Sbjct: 77 GNIQYLFLEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D R+++KI DFGLA + ++ Y APE+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPEL 178
Query: 649 EQGWPKIDEKADMYSLGIVF 668
+ E D++S GIV
Sbjct: 179 LKRREFHAEPVDVWSCGIVL 198
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 61/265 (23%)
Query: 410 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR 469
SG N+ + + + + LG G FG V+ CK+++ + YAVK I
Sbjct: 9 SGRENLYFQGT-FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67
Query: 470 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 529
ILREV L +L H ++++ ++ D S + G L TG
Sbjct: 68 ILREVELLKKLDHPNIMKLFEIL-------EDSSSFYIVGEL--------------YTGG 106
Query: 530 ENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 589
E L+ ++ R+ F +D A + +Q+ G+ ++H I+HRDL
Sbjct: 107 E-------LFDEI-----IKRKRFSEHD------AARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 590 PNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI +++ DIKI DFGL+ + +D +Y AP
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI----------------GTAYYIAP 192
Query: 647 EIEQGWPKIDEKADMYSLGIVFFEL 671
E+ +G DEK D++S G++ + L
Sbjct: 193 EVLRG--TYDEKCDVWSAGVILYIL 215
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 61/265 (23%)
Query: 410 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR 469
SG N+ + + + + LG G FG V+ CK+++ + YAVK I
Sbjct: 9 SGRENLYFQGT-FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67
Query: 470 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 529
ILREV L +L H ++++ ++ D S + G L TG
Sbjct: 68 ILREVELLKKLDHPNIMKLFEIL-------EDSSSFYIVGEL--------------YTGG 106
Query: 530 ENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 589
E L+ ++ R+ F +D A + +Q+ G+ ++H I+HRDL
Sbjct: 107 E-------LFDEI-----IKRKRFSEHD------AARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 590 PNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI +++ DIKI DFGL+ + +D +Y AP
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI----------------GTAYYIAP 192
Query: 647 EIEQGWPKIDEKADMYSLGIVFFEL 671
E+ +G DEK D++S G++ + L
Sbjct: 193 EVLRG--TYDEKCDVWSAGVILYIL 215
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 63/252 (25%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI----RLKDKSLPVNDRILREVATLSRLQ 481
++ + LG GG V L ++ + A+K I R K+++L R REV S+L
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK---RFEREVHNSSQLS 69
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
HQ++V + D D E Y+
Sbjct: 70 HQNIV---------SMIDVDE-------------------------------EDDCYYLV 89
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
MEY TL + ES+ + A + QI++G+ H H I+HRD+ P NI D+
Sbjct: 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT 149
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG+AK L L Q YF +PE +G DE D
Sbjct: 150 LKIFDFGIAKALSETSLTQ------------TNHVLGTVQYF--SPEQAKGEAT-DECTD 194
Query: 661 MYSLGIVFFELW 672
+YS+GIV +E+
Sbjct: 195 IYSIGIVLYEML 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 61
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 62 HENVVKFYG----------------------------------------HRREGNIQYLF 81
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 82 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 136
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 137 DERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPELLKRREFH 183
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 184 AEPVDVWSCGIVL 196
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 68/260 (26%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 474
M++P ++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEI 56
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L H++VV++Y ++ E
Sbjct: 57 XINKMLNHENVVKFYG----------------------------------------HRRE 76
Query: 535 STYLYIQMEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDL 588
Y+ +EYC E +D + ++ A F Q++ G+ ++HG GI HRD+
Sbjct: 77 GNIQYLFLEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D R+++KI DFGLA + ++ Y APE+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRER-------------LLNKMXGTLPYVAPEL 178
Query: 649 EQGWPKIDEKADMYSLGIVF 668
+ E D++S GIV
Sbjct: 179 LKRREFHAEPVDVWSCGIVL 198
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMXGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMXGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMXGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMXGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G +G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 51/256 (19%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKI----RLKDKSLPVNDRILREVATLSRLQHQHVVR 487
LG G FG V + G+ +A+KK+ R K+ RE+ + L H ++++
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN----------RELDIMKVLDHVNIIK 64
Query: 488 YYQAWFETGVADF-------DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
++ TG + D + + G N S V +NK YL +
Sbjct: 65 LVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGV-----NNHHKSVIVNPSQNK----YLNV 115
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY P TL +V +S+ + + +L Q+ + IH GI HRD+ P N+ +
Sbjct: 116 IMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN 175
Query: 597 AR-NDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
++ N +K+ DFG AK KL + A FY APE+ G +
Sbjct: 176 SKDNTLKLCDFGSAK--KLIPSEPSVA--------------XICSRFYRAPELMLGATEY 219
Query: 656 DEKADMYSLGIVFFEL 671
D++S+G VF EL
Sbjct: 220 TPSIDLWSIGCVFGEL 235
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 101/242 (41%), Gaps = 58/242 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 490
LG G FG V + K++L G AVK + R K +SL V +I RE+ L +H H+++ YQ
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
ST S+ V+G E +Y + R
Sbjct: 84 VI---------------------STPSDIFMVMEYVSGGE----------LFDYICKNGR 112
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
D++ + LF+QI+ G+ + H ++HRDL P N+ DA + KI DFGL+
Sbjct: 113 --------LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN 164
Query: 611 FLK-LEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFF 669
+ E L P Y APE+ G + D++S G++ +
Sbjct: 165 MMSDGEFLRXSCGSPN-----------------YAAPEVISGRLYAGPEVDIWSSGVILY 207
Query: 670 EL 671
L
Sbjct: 208 AL 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 65/253 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
++ D++ +Q LG G G V L N++ AVK + +K +++ + I +E+ L
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 62
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H++VV++Y ++ E Y+
Sbjct: 63 HENVVKFYG----------------------------------------HRREGNIQYLF 82
Query: 542 MEYCPRTLRQVFESYDHFDKEL------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+EYC E +D + ++ A F Q++ G+ ++HG GI HRD+ P N+
Sbjct: 83 LEYCSGG-----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D R+++KI DFGLA + ++ Y APE+ +
Sbjct: 138 DERDNLKISDFGLATVFRYNNRER-------------LLNKMCGTLPYVAPELLKRREFH 184
Query: 656 DEKADMYSLGIVF 668
E D++S GIV
Sbjct: 185 AEPVDVWSCGIVL 197
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 116/294 (39%), Gaps = 66/294 (22%)
Query: 414 NMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDR 469
+M+ PS +L+D EL + LG GG V L ++ D R AVK +R +D S + R
Sbjct: 3 HMTTPS--HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL--R 58
Query: 470 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 529
RE + L H +V Y TG+
Sbjct: 59 FRREAQNAAALNHPAIVAVYD------------------------------------TGE 82
Query: 530 ENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
YI MEY TLR + + + A + + L H GIIHRD+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 589 TPNNIFFDARNDIKIGDFGLAKFL--KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI A N +K+ DFG+A+ + + Q AA Y +P
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ--------------YLSP 188
Query: 647 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS 697
E +G +D ++D+YSLG V +E+ PF+ + +++ +PPS
Sbjct: 189 EQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRED-PIPPS 240
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 116/294 (39%), Gaps = 66/294 (22%)
Query: 414 NMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDR 469
+M+ PS +L+D EL + LG GG V L ++ D R AVK +R +D S + R
Sbjct: 3 HMTTPS--HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL--R 58
Query: 470 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 529
RE + L H +V Y TG+
Sbjct: 59 FRREAQNAAALNHPAIVAVYD------------------------------------TGE 82
Query: 530 ENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
YI MEY TLR + + + A + + L H GIIHRD+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 589 TPNNIFFDARNDIKIGDFGLAKFL--KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI A N +K+ DFG+A+ + + Q AA Y +P
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ--------------YLSP 188
Query: 647 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS 697
E +G +D ++D+YSLG V +E+ PF+ + +++ +PPS
Sbjct: 189 EQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED-PIPPS 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 116/294 (39%), Gaps = 66/294 (22%)
Query: 414 NMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDR 469
+M+ PS +L+D EL + LG GG V L ++ D R AVK +R +D S + R
Sbjct: 3 HMTTPS--HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL--R 58
Query: 470 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 529
RE + L H +V Y TG+
Sbjct: 59 FRREAQNAAALNHPAIVAVYD------------------------------------TGE 82
Query: 530 ENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
YI MEY TLR + + + A + + L H GIIHRD+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 589 TPNNIFFDARNDIKIGDFGLAKFL--KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI A N +K+ DFG+A+ + + Q AA Y +P
Sbjct: 143 KPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ--------------YLSP 188
Query: 647 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS 697
E +G +D ++D+YSLG V +E+ PF+ + +++ +PPS
Sbjct: 189 EQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED-PIPPS 240
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 42/249 (16%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
+G G +G+V L +K ++ A+KK+ + L RILRE+ L+RL+ +++R Y
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 551
+ FD LYI +E L++
Sbjct: 94 IIPDDLLKFDE-----------------------------------LYIVLEIADSDLKK 118
Query: 552 VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 611
+F++ +E + ++ G IH GIIHRDL P N + +K+ DFGLA+
Sbjct: 119 LFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178
Query: 612 LKLEQ-------LDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSL 664
+ E+ L+++ +Y APE+ + D++S
Sbjct: 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWST 238
Query: 665 GIVFFELWH 673
G +F EL +
Sbjct: 239 GCIFAELLN 247
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 55/244 (22%)
Query: 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
L+P+G G +G V + + AVKK+ +SL R RE+ L L+H++V+
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 489 YQAWF-ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 547
+ T + DF ++ TL + +N S A
Sbjct: 93 LDVFTPATSIEDFS--EVYLVTTLMGADLNNIVKSQA----------------------- 127
Query: 548 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 607
E L Q++ GL +IH GIIHRDL P+N+ + ++++I DFG
Sbjct: 128 -----------LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFG 176
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
LA+ Q D++ +Y APEI W ++ D++S+G +
Sbjct: 177 LAR-----QADEEMT-------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 668 FFEL 671
EL
Sbjct: 219 MAEL 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 61/261 (23%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--- 468
+P SL ++ +++ ++ LG G FG V L + G+ A+K I K L +D
Sbjct: 2 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII--NKKVLAKSDMQG 59
Query: 469 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 528
RI RE++ L L+H H+++ Y DV
Sbjct: 60 RIEREISYLRLLRHPHIIKLY-----------------------------------DVIK 84
Query: 529 QENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
++++ + +EY L D ++ A F+QI+ + + H I+HRDL
Sbjct: 85 SKDEI-----IMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 139
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D ++KI DFGL+ + D F Y APE+
Sbjct: 140 KPENLLLDEHLNVKIADFGLSNIM------TDGNFLKTSCGSPN----------YAAPEV 183
Query: 649 EQGWPKIDEKADMYSLGIVFF 669
G + D++S G++ +
Sbjct: 184 ISGKLYAGPEVDVWSCGVILY 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 61/261 (23%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--- 468
+P SL ++ +++ ++ LG G FG V L + G+ A+K I K L +D
Sbjct: 1 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII--NKKVLAKSDMQG 58
Query: 469 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 528
RI RE++ L L+H H+++ Y DV
Sbjct: 59 RIEREISYLRLLRHPHIIKLY-----------------------------------DVIK 83
Query: 529 QENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
++++ + +EY L D ++ A F+QI+ + + H I+HRDL
Sbjct: 84 SKDEI-----IMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 138
Query: 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
P N+ D ++KI DFGL+ + D F Y APE+
Sbjct: 139 KPENLLLDEHLNVKIADFGLSNIM------TDGNFLKTSCGSPN----------YAAPEV 182
Query: 649 EQGWPKIDEKADMYSLGIVFF 669
G + D++S G++ +
Sbjct: 183 ISGKLYAGPEVDVWSCGVILY 203
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 69/268 (25%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 467
G+ S ++ ++ L+ +G G F V L ++ L G+ AVK K +L SL
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--- 57
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
++ REV + L H ++V+ ++ ET
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEV-IET-------------------------------- 84
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGII 584
E T LY+ MEY +VF+ ++ ++ A FRQIV + + H + I+
Sbjct: 85 ------EKT-LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFY 643
HRDL N+ DA +IKI DFG + +F +LD P Y
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPP-----------------Y 178
Query: 644 TAPEIEQGWPKIDEKADMYSLGIVFFEL 671
APE+ QG + D++SLG++ + L
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTL 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 69/268 (25%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 467
G+ S ++ ++ L+ +G G F V L ++ L G+ AVK K +L SL
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--- 57
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
++ REV + L H ++V+ ++ ET
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEV-IET-------------------------------- 84
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGII 584
E T LY+ MEY +VF+ ++ ++ A FRQIV + + H + I+
Sbjct: 85 ------EKT-LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFY 643
HRDL N+ DA +IKI DFG + +F +LD P Y
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP-----------------Y 178
Query: 644 TAPEIEQGWPKIDEKADMYSLGIVFFEL 671
APE+ QG + D++SLG++ + L
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTL 206
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 69/268 (25%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 467
G+ S ++ ++ L+ +G G F V L ++ L G+ AVK K +L SL
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--- 57
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
++ REV + L H ++V+ ++ ET
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEV-IET-------------------------------- 84
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGII 584
E T LY+ MEY +VF+ ++ ++ A FRQIV + + H + I+
Sbjct: 85 ------EKT-LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFY 643
HRDL N+ DA +IKI DFG + +F +LD P Y
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP-----------------Y 178
Query: 644 TAPEIEQGWPKIDEKADMYSLGIVFFEL 671
APE+ QG + D++SLG++ + L
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTL 206
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 69/257 (26%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILREVATLS 478
++ ++ L+ +G G F V L ++ L GR A+K K +L SL ++ REV +
Sbjct: 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL---QKLFREVRIMK 69
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L H ++V+ ++ ET E T L
Sbjct: 70 ILNHPNIVKLFEV-IET--------------------------------------EKT-L 89
Query: 539 YIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
Y+ MEY +VF+ ++ ++ A FRQIV + + H + I+HRDL N+
Sbjct: 90 YLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 147
Query: 596 DARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK 654
DA +IKI DFG + +F +LD P Y APE+ QG
Sbjct: 148 DADMNIKIADFGFSNEFTVGGKLDAFCGAPP-----------------YAAPELFQGKKY 190
Query: 655 IDEKADMYSLGIVFFEL 671
+ D++SLG++ + L
Sbjct: 191 DGPEVDVWSLGVILYTL 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 69/257 (26%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILREVATLS 478
++ ++ L+ +G G F V L ++ L GR A+K K +L SL ++ REV +
Sbjct: 10 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL---QKLFREVRIMK 66
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L H ++V+ ++ ET E T L
Sbjct: 67 ILNHPNIVKLFEV-IET--------------------------------------EKT-L 86
Query: 539 YIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
Y+ MEY +VF+ ++ ++ A FRQIV + + H + I+HRDL N+
Sbjct: 87 YLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 144
Query: 596 DARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK 654
DA +IKI DFG + +F +LD P Y APE+ QG
Sbjct: 145 DADMNIKIADFGFSNEFTVGGKLDTFCGSPP-----------------YAAPELFQGKKY 187
Query: 655 IDEKADMYSLGIVFFEL 671
+ D++SLG++ + L
Sbjct: 188 DGPEVDVWSLGVILYTL 204
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 111/275 (40%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G VV + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLVGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGTSFMMTP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G++ E+
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGVIMGEM 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 69/268 (25%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 467
G+ S ++ ++ L+ +G G F V L ++ L G+ AV+ K +L SL
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL--- 57
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
++ REV + L H ++V+ ++ ET
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEV-IET-------------------------------- 84
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGII 584
E T LY+ MEY +VF+ ++ ++ A FRQIV + + H + I+
Sbjct: 85 ------EKT-LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFY 643
HRDL N+ DA +IKI DFG + +F +LD+ P Y
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPP-----------------Y 178
Query: 644 TAPEIEQGWPKIDEKADMYSLGIVFFEL 671
APE+ QG + D++SLG++ + L
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTL 206
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 34/194 (17%)
Query: 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 479
SRY+ +L+PLG GG G V + + A+KKI L D LRE+ + R
Sbjct: 11 SRYM----DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ--SVKHALREIKIIRR 64
Query: 480 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
L H ++V+ ++ +G + D G +L S +Y
Sbjct: 65 LDHDNIVKVFEILGPSG------------------------SQLTDDVGSLTELNS--VY 98
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
I EY L V E ++ ++ Q++ GL +IH ++HRDL P N+F + +
Sbjct: 99 IVQEYMETDLANVLEQGPLLEEHARLFMY-QLLRGLKYIHSANVLHRDLKPANLFINTED 157
Query: 600 DI-KIGDFGLAKFL 612
+ KIGDFGLA+ +
Sbjct: 158 LVLKIGDFGLARIM 171
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 42/249 (16%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DF+ LG G +G V +K G A+KKI DK L R LRE+ L +H+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTLREIKILKHFKHE 69
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+++ + +F+ +YI E
Sbjct: 70 NIITIFNIQRPDSFENFNE-----------------------------------VYIIQE 94
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
L +V + D + + ++ Q + + +HG +IHRDL P+N+ ++ D+K+
Sbjct: 95 LMQTDLHRVISTQMLSDDHIQYFIY-QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKV 153
Query: 604 GDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYS 663
DFGLA+ +D+ AA +Y APE+ K D++S
Sbjct: 154 CDFGLARI-----IDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWS 208
Query: 664 LGIVFFELW 672
G + EL+
Sbjct: 209 CGCILAELF 217
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 46/182 (25%)
Query: 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 479
SRY +F EL+ +G G FG V C +LDG YA+K+ + LREV +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 480 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L QH HVVRY+ AW E ++
Sbjct: 65 LGQHSHVVRYFSAW----------------------------------------AEDDHM 84
Query: 539 YIQMEYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
IQ EYC + + + +F + L Q+ GL +IH ++H D+ P+NI
Sbjct: 85 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI 144
Query: 594 FF 595
F
Sbjct: 145 FI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 46/182 (25%)
Query: 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 479
SRY +F EL+ +G G FG V C +LDG YA+K+ + LREV +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 480 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L QH HVVRY+ AW E ++
Sbjct: 65 LGQHSHVVRYFSAW----------------------------------------AEDDHM 84
Query: 539 YIQMEYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
IQ EYC + + + +F + L Q+ GL +IH ++H D+ P+NI
Sbjct: 85 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI 144
Query: 594 FF 595
F
Sbjct: 145 FI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 46/182 (25%)
Query: 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 479
SRY +F EL+ +G G FG V C +LDG YA+K+ + LREV +
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 480 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L QH HVVRY+ AW E ++
Sbjct: 67 LGQHSHVVRYFSAW----------------------------------------AEDDHM 86
Query: 539 YIQMEYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
IQ EYC + + + +F + L Q+ GL +IH ++H D+ P+NI
Sbjct: 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI 146
Query: 594 FF 595
F
Sbjct: 147 FI 148
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 42/249 (16%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DF+ LG G +G V +K G A+KKI DK L R LRE+ L +H+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTLREIKILKHFKHE 69
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+++ + +F+ +YI E
Sbjct: 70 NIITIFNIQRPDSFENFNE-----------------------------------VYIIQE 94
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
L +V + D + + ++ Q + + +HG +IHRDL P+N+ ++ D+K+
Sbjct: 95 LMQTDLHRVISTQMLSDDHIQYFIY-QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKV 153
Query: 604 GDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYS 663
DFGLA+ +D+ AA +Y APE+ K D++S
Sbjct: 154 CDFGLARI-----IDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWS 208
Query: 664 LGIVFFELW 672
G + EL+
Sbjct: 209 CGCILAELF 217
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 46/182 (25%)
Query: 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 479
SRY +F EL+ +G G FG V C +LDG YA+K+ + LREV +
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 62
Query: 480 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L QH HVVRY+ AW E ++
Sbjct: 63 LGQHSHVVRYFSAW----------------------------------------AEDDHM 82
Query: 539 YIQMEYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
IQ EYC + + + +F + L Q+ GL +IH ++H D+ P+NI
Sbjct: 83 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI 142
Query: 594 FF 595
F
Sbjct: 143 FI 144
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 42/249 (16%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DF+ LG G +G V +K G A+KKI DK L R LRE+ L +H+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTLREIKILKHFKHE 69
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+++ + +F+ +YI E
Sbjct: 70 NIITIFNIQRPDSFENFNE-----------------------------------VYIIQE 94
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
L +V + D + + ++ Q + + +HG +IHRDL P+N+ ++ D+K+
Sbjct: 95 LMQTDLHRVISTQMLSDDHIQYFIY-QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKV 153
Query: 604 GDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYS 663
DFGLA+ +D+ AA +Y APE+ K D++S
Sbjct: 154 CDFGLARI-----IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWS 208
Query: 664 LGIVFFELW 672
G + EL+
Sbjct: 209 CGCILAELF 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 105/269 (39%), Gaps = 63/269 (23%)
Query: 407 SVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV 466
VD G+ N+ S + +E L +G G +G V+ C+NK GR A+KK D V
Sbjct: 11 GVDLGTENLYFQS---MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV 67
Query: 467 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 526
+RE+ L +L+H+++V + + W
Sbjct: 68 KKIAMREIKLLKQLRHENLVNLLEVCKKK--------KRW-------------------- 99
Query: 527 TGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIH 585
Y+ E+ T+ E + + D ++ QI+ G+ H IIH
Sbjct: 100 ------------YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIH 147
Query: 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKL--EQLDQDAAFPXXXXXXXXXXXXXXXXYFY 643
RD+ P NI +K+ DFG A+ L E D + A +Y
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-----------------TRWY 190
Query: 644 TAPEIEQGWPKIDEKADMYSLGIVFFELW 672
APE+ G K + D++++G + E++
Sbjct: 191 RAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 55/244 (22%)
Query: 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
L+P+G G +G V + + AVKK+ +SL R RE+ L L+H++V+
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 489 YQAWF-ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 547
+ T + DF ++ TL + +N A
Sbjct: 93 LDVFTPATSIEDFS--EVYLVTTLMGADLNNIVKCQA----------------------- 127
Query: 548 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 607
E L Q++ GL +IH GIIHRDL P+N+ + ++++I DFG
Sbjct: 128 -----------LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFG 176
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
LA+ Q D++ +Y APEI W ++ D++S+G +
Sbjct: 177 LAR-----QADEEMT-------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 668 FFEL 671
EL
Sbjct: 219 MAEL 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 69/268 (25%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 467
G+ S ++ ++ L+ +G G F V L ++ L G+ AV+ K +L SL
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL--- 57
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
++ REV + L H ++V+ ++ ET
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEV-IET-------------------------------- 84
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGII 584
E T LY+ MEY +VF+ ++ ++ A FRQIV + + H + I+
Sbjct: 85 ------EKT-LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFY 643
HRDL N+ DA +IKI DFG + +F +LD P Y
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP-----------------Y 178
Query: 644 TAPEIEQGWPKIDEKADMYSLGIVFFEL 671
APE+ QG + D++SLG++ + L
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTL 206
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 58/301 (19%)
Query: 376 ASKPSSQFNKTFNQVFHQKMVSSRVSQFW---KPSVDSGSPNMSLPSSRY--LNDFEELQ 430
S+P+ F Q F +++ S +++ + K VD+ ++ + S + L ++ L+
Sbjct: 9 CSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLK 68
Query: 431 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 490
P+G G G V + + R+ A+KK+ ++ R RE+ + + H++++
Sbjct: 69 PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 128
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ T Q+ E +Y+ ME L
Sbjct: 129 VF----------------------------------TPQKTLEEFQDVYLVMELMDANLC 154
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 155 QVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 611 FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 670
+Y APE+ G E D++S+G + E
Sbjct: 213 ----------------TAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGE 255
Query: 671 L 671
+
Sbjct: 256 M 256
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ +LQP+G G +G V + G A+KK+ +S R RE+ L ++H++V
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D T E + T Y+ M +
Sbjct: 87 I---------GLLDV-------------------------FTPDETLDDFTDFYLVMPFM 112
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L ++ + ++ ++ L Q+++GL +IH GIIHRDL P N+ + ++KI D
Sbjct: 113 GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILD 171
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ Q D + +Y APE+ W + + D++S+G
Sbjct: 172 FGLAR-----QADSEMX-------------GXVVTRWYRAPEVILNWMRYTQTVDIWSVG 213
Query: 666 IVFFEL 671
+ E+
Sbjct: 214 CIMAEM 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 102/248 (41%), Gaps = 45/248 (18%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+++E ++ +G+G +G V + +L G+ A+KKI + R LRE+ L +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+++ + D T+ F + +Y+ ++
Sbjct: 115 NII---------AIKDI------LRPTVPYGEFKS-------------------VYVVLD 140
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
L Q+ S E + Q++ GL ++H +IHRDL P+N+ + ++KI
Sbjct: 141 LMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKI 200
Query: 604 GDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYS 663
GDFG+A+ L + +Y APE+ + + D++S
Sbjct: 201 GDFGMARGLCTSPAEHQ-----------YFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 249
Query: 664 LGIVFFEL 671
+G +F E+
Sbjct: 250 VGCIFGEM 257
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 99/247 (40%), Gaps = 52/247 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
F++L+ LG+G + V NK G + A+K+++L D +RE++ + L+H+++
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKL-DSEEGTPSTAIREISLMKELKHENI 65
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR Y DV ENKL + ++ +
Sbjct: 66 VRLY-----------------------------------DVIHTENKLTLVFEFMDNDLK 90
Query: 546 PRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
R V + + L + Q+++GLA H I+HRDL P N+ + R +K+G
Sbjct: 91 KYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLG 150
Query: 605 DFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSL 664
DFGLA+ + +Y AP++ G D++S
Sbjct: 151 DFGLARAFGIP---------------VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSC 195
Query: 665 GIVFFEL 671
G + E+
Sbjct: 196 GCILAEM 202
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 55/244 (22%)
Query: 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
L+P+G G +G V + + AVKK+ +SL R RE+ L L+H++V+
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 489 YQAWF-ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 547
+ T + DF ++ TL + +N A
Sbjct: 85 LDVFTPATSIEDFS--EVYLVTTLMGADLNNIVKCQA----------------------- 119
Query: 548 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 607
E L Q++ GL +IH GIIHRDL P+N+ + +++I DFG
Sbjct: 120 -----------LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFG 168
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
LA+ Q D++ +Y APEI W ++ D++S+G +
Sbjct: 169 LAR-----QADEEMT-------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 668 FFEL 671
EL
Sbjct: 211 MAEL 214
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLVGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGTSFMMTP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G++ E+
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGVIMGEM 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 69/257 (26%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILREVATLS 478
++ ++ L+ +G G F V L ++ L G+ AVK K +L SL ++ REV +
Sbjct: 5 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL---QKLFREVRIMK 61
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L H ++V+ ++ ET E T L
Sbjct: 62 VLNHPNIVKLFEV-IET--------------------------------------EKT-L 81
Query: 539 YIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
Y+ MEY +VF+ ++ ++ A FRQIV + + H + I+HRDL N+
Sbjct: 82 YLVMEYASGG--EVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 139
Query: 596 DARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK 654
DA +IKI DFG + +F +LD P Y APE+ QG
Sbjct: 140 DADMNIKIADFGFSNEFTFGNKLDTFCGSPP-----------------YAAPELFQGKKY 182
Query: 655 IDEKADMYSLGIVFFEL 671
+ D++SLG++ + L
Sbjct: 183 DGPEVDVWSLGVILYTL 199
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 98/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ D+ A F +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTD----DEMAGF--------------VATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 98/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ D+ A F +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTD----DEMAGF--------------VATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 56/241 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 490
LG G FG V + +++L G AVK + R K +SL V +I RE+ L +H H+++ YQ
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ DF + SG D + ++E +ME
Sbjct: 79 VI--STPTDFFMVMEYVSG-----------GELFDYICKHGRVE------EME------- 112
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
A LF+QI+ + + H ++HRDL P N+ DA + KI DFGL+
Sbjct: 113 -------------ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN 159
Query: 611 FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 670
+ + +D+ Y APE+ G + D++S G++ +
Sbjct: 160 MMSDGEFLRDSCGSPN----------------YAAPEVISGRLYAGPEVDIWSCGVILYA 203
Query: 671 L 671
L
Sbjct: 204 L 204
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 58/301 (19%)
Query: 376 ASKPSSQFNKTFNQVFHQKMVSSRVSQFW---KPSVDSGSPNMSLPSSRY--LNDFEELQ 430
S+P+ F Q F +++ S +++ + K VD+ ++ + S + L ++ L+
Sbjct: 9 CSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLK 68
Query: 431 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 490
P+G G G V + + R+ A+KK+ ++ R RE+ + + H++++
Sbjct: 69 PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 128
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ T Q+ E +Y+ ME L
Sbjct: 129 VF----------------------------------TPQKTLEEFQDVYLVMELMDANLC 154
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 155 QVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 611 FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 670
+Y APE+ G E D++S+G + E
Sbjct: 213 ----------------TAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGE 255
Query: 671 L 671
+
Sbjct: 256 M 256
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 102/248 (41%), Gaps = 45/248 (18%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+++E ++ +G+G +G V + +L G+ A+KKI + R LRE+ L +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+++ + D T+ F + +Y+ ++
Sbjct: 114 NII---------AIKDI------LRPTVPYGEFKS-------------------VYVVLD 139
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
L Q+ S E + Q++ GL ++H +IHRDL P+N+ + ++KI
Sbjct: 140 LMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKI 199
Query: 604 GDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYS 663
GDFG+A+ L + +Y APE+ + + D++S
Sbjct: 200 GDFGMARGLCTSPAEHQ-----------YFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 248
Query: 664 LGIVFFEL 671
+G +F E+
Sbjct: 249 VGCIFGEM 256
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 115/294 (39%), Gaps = 66/294 (22%)
Query: 414 NMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDR 469
+M+ PS +L+D EL + LG GG V L ++ R AVK +R +D S + R
Sbjct: 3 HMTTPS--HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL--R 58
Query: 470 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 529
RE + L H +V Y TG+
Sbjct: 59 FRREAQNAAALNHPAIVAVY------------------------------------ATGE 82
Query: 530 ENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
YI MEY TLR + + + A + + L H GIIHRD+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 589 TPNNIFFDARNDIKIGDFGLAKFL--KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI A N +K+ DFG+A+ + + Q AA Y +P
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ--------------YLSP 188
Query: 647 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS 697
E +G +D ++D+YSLG V +E+ PF+ + +++ +PPS
Sbjct: 189 EQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED-PIPPS 240
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 115/294 (39%), Gaps = 66/294 (22%)
Query: 414 NMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDR 469
+M+ PS +L+D EL + LG GG V L ++ R AVK +R +D S + R
Sbjct: 3 HMTTPS--HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL--R 58
Query: 470 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 529
RE + L H +V Y TG+
Sbjct: 59 FRREAQNAAALNHPAIVAVYD------------------------------------TGE 82
Query: 530 ENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
YI MEY TLR + + + A + + L H GIIHRD+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 589 TPNNIFFDARNDIKIGDFGLAKFL--KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI A N +K+ DFG+A+ + + Q AA Y +P
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ--------------YLSP 188
Query: 647 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS 697
E +G +D ++D+YSLG V +E+ PF+ + +++ +PPS
Sbjct: 189 EQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED-PIPPS 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 98/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 80 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 105
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 106 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 164
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ D+ A F +Y APEI W ++ D++S+G
Sbjct: 165 FGLARHTD----DEMAGF--------------VATRWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 666 IVFFEL 671
+ EL
Sbjct: 207 CIMAEL 212
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 61/278 (21%)
Query: 395 MVSSRV-SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYA 453
M S+V +QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A
Sbjct: 1 MSKSKVDNQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 454 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 513
+KK+ ++ R RE+ + + H++++ +
Sbjct: 54 IKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF--------------------- 92
Query: 514 STFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVE 573
T Q+ E +Y+ ME L QV + D E +L Q++
Sbjct: 93 -------------TPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERMSYLLYQMLX 137
Query: 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXX 633
G+ H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGTSFM 181
Query: 634 XXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 182 MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 56/241 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
+G G +G V +K G A+KK+ +S R RE+ L +QH++V+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI----- 104
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY-LYIQMEYCPRTLR 550
G L DV + L + Y Y+ M + L+
Sbjct: 105 -----------------GLL-------------DVFTPASSLRNFYDFYLVMPFMQTDLQ 134
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
++ F +E +L Q+++GL +IH G++HRDL P N+ + ++KI DFGLA+
Sbjct: 135 KIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
Query: 611 FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 670
E +Y APE+ W ++ D++S+G + E
Sbjct: 193 HADAEM------------------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE 234
Query: 671 L 671
+
Sbjct: 235 M 235
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 58/242 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 490
LG G FG V + +++L G AVK + R K +SL V +I RE+ L +H H+++ YQ
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ DF + SG D + ++E +ME
Sbjct: 79 VI--STPTDFFMVMEYVSG-----------GELFDYICKHGRVE------EME------- 112
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
A LF+QI+ + + H ++HRDL P N+ DA + KI DFGL+
Sbjct: 113 -------------ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN 159
Query: 611 FLK-LEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFF 669
+ E L P Y APE+ G + D++S G++ +
Sbjct: 160 MMSDGEFLRTSCGSPN-----------------YAAPEVISGRLYAGPEVDIWSCGVILY 202
Query: 670 EL 671
L
Sbjct: 203 AL 204
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 61/278 (21%)
Query: 395 MVSSRV-SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYA 453
M S+V +QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A
Sbjct: 1 MSKSKVDNQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 454 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 513
+KK+ ++ R RE+ + + H++++ +
Sbjct: 54 IKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--------------------- 92
Query: 514 STFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVE 573
T Q+ E +Y+ ME L QV + D E +L Q++
Sbjct: 93 -------------TPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERMSYLLYQMLX 137
Query: 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXX 633
G+ H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGTSFM 181
Query: 634 XXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 182 MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 35/187 (18%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+++E +G G +G+V L +K ++ A+KK+ + L RILRE+ L+RL+
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+++R + + FD LYI +E
Sbjct: 88 YIIRLHDLIIPEDLLKFDE-----------------------------------LYIVLE 112
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
L+++F++ ++ + ++ G IH GIIHRDL P N + +KI
Sbjct: 113 IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKI 172
Query: 604 GDFGLAK 610
DFGLA+
Sbjct: 173 CDFGLAR 179
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 56/241 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
+G G +G V +K G A+KK+ +S R RE+ L +QH++V+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI----- 86
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY-LYIQMEYCPRTLR 550
G L DV + L + Y Y+ M + L+
Sbjct: 87 -----------------GLL-------------DVFTPASSLRNFYDFYLVMPFMQTDLQ 116
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
++ F +E +L Q+++GL +IH G++HRDL P N+ + ++KI DFGLA+
Sbjct: 117 KIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
Query: 611 FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 670
E +Y APE+ W ++ D++S+G + E
Sbjct: 175 HADAEM------------------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE 216
Query: 671 L 671
+
Sbjct: 217 M 217
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 72/284 (25%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILREVATLS 478
++ ++ + +G G F V L ++ L GR AVK K +L SL ++ REV +
Sbjct: 13 HIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL---QKLFREVRIMK 69
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L H ++V+ ++ ET E T L
Sbjct: 70 ILNHPNIVKLFEV-IET--------------------------------------EKT-L 89
Query: 539 YIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
Y+ MEY + +VF+ ++ ++ A FRQIV + + H + I+HRDL N+
Sbjct: 90 YLVMEYA--SGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLL 147
Query: 596 DARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK 654
D +IKI DFG + +F +LD P Y APE+ QG
Sbjct: 148 DGDMNIKIADFGFSNEFTVGNKLDTFCGSPP-----------------YAAPELFQGKKY 190
Query: 655 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP 695
+ D++SLG++ + L PF +++ L+ K +P
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 97/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + +S D + + L QI+ GL +IH IIHRDL P+N+ + +++KI D
Sbjct: 110 GADLNNIVKSQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGL + E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLCRHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 61/278 (21%)
Query: 395 MVSSRV-SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYA 453
M S+V +QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A
Sbjct: 1 MSKSKVDNQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 454 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 513
+KK+ ++ R RE+ + + H++++ +
Sbjct: 54 IKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF--------------------- 92
Query: 514 STFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVE 573
T Q+ E +Y+ ME L QV + D E +L Q++
Sbjct: 93 -------------TPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERMSYLLYQMLC 137
Query: 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXX 633
G+ H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGTSFM 181
Query: 634 XXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 182 MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLVGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGTSFMMTP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 97/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 86 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 111
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + +++KI D
Sbjct: 112 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILD 170
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 171 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 666 IVFFEL 671
+ EL
Sbjct: 213 CIMAEL 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 97/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 90 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + +++KI D
Sbjct: 116 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILD 174
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 175 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 666 IVFFEL 671
+ EL
Sbjct: 217 CIMAEL 222
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 104 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 129
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 130 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 188
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 189 FGLARHTDDEMXGXVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 230
Query: 666 IVFFEL 671
+ EL
Sbjct: 231 CIMAEL 236
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 114/276 (41%), Gaps = 78/276 (28%)
Query: 428 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKI--------RLKDKSLPV---NDRILREVAT 476
+++ LG G +G V+LCK K A+K I R D + + ++ I E++
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 536
L L H ++++ + FE +
Sbjct: 100 LKSLDHPNIIKLFDV-FE---------------------------------------DKK 119
Query: 537 YLYIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 594
Y Y+ E+ Q+ + FD+ A ++ +QI+ G+ ++H I+HRD+ P NI
Sbjct: 120 YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENIL 178
Query: 595 FDARN---DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
+ +N +IKI DFGL+ F + +D +Y APE+ +
Sbjct: 179 LENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTA----------------YYIAPEVLK- 221
Query: 652 WPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIV 684
K +EK D++S G++ + L + PF ++ I+
Sbjct: 222 -KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLCGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGTSFMMTP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLCGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGTSFMMTP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 59/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +++L+ +G G +G V K+ GR A+K+IRL + + +RE++ L L H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V S DV E L +
Sbjct: 79 PNIV-----------------------------------SLIDVIHSERCLTLVF----- 98
Query: 543 EYCPRTLRQVFESYDHF--DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
E+ + L++V + D ++ +L+ Q++ G+AH H I+HRDL P N+ ++
Sbjct: 99 EFMEKDLKKVLDENKTGLQDSQIKIYLY-QLLRGVAHCHQHRILHRDLKPQNLLINSDGA 157
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+K+ DFGLA+ + +Y AP++ G K D
Sbjct: 158 LKLADFGLARAFGIP---------------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 661 MYSLGIVFFEL 671
++S+G +F E+
Sbjct: 203 IWSIGCIFAEM 213
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 59/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ +++L+ +G G +G V K+ GR A+K+IRL + + +RE++ L L H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V S DV E L +
Sbjct: 79 PNIV-----------------------------------SLIDVIHSERCLTLVF----- 98
Query: 543 EYCPRTLRQVFESYDHF--DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
E+ + L++V + D ++ +L+ Q++ G+AH H I+HRDL P N+ ++
Sbjct: 99 EFMEKDLKKVLDENKTGLQDSQIKIYLY-QLLRGVAHCHQHRILHRDLKPQNLLINSDGA 157
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+K+ DFGLA+ + +Y AP++ G K D
Sbjct: 158 LKLADFGLARAFGIP---------------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 661 MYSLGIVFFEL 671
++S+G +F E+
Sbjct: 203 IWSIGCIFAEM 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 89 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 114
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 115 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILD 173
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 174 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 666 IVFFEL 671
+ EL
Sbjct: 216 CIMAEL 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 61/256 (23%)
Query: 417 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND---RILRE 473
L ++ +++ ++ LG G FG V L + G+ A+K I K L +D RI RE
Sbjct: 1 LADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII--NKKVLAKSDMQGRIERE 58
Query: 474 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
++ L L+H H+++ Y DV ++++
Sbjct: 59 ISYLRLLRHPHIIKLY-----------------------------------DVIKSKDEI 83
Query: 534 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
+ +EY L D ++ A F+QI+ + + H I+HRDL P N+
Sbjct: 84 -----IMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 138
Query: 594 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
D ++KI DFGL+ + D F Y APE+ G
Sbjct: 139 LLDEHLNVKIADFGLSNIM------TDGNFLKTSCGSPN----------YAAPEVISGKL 182
Query: 654 KIDEKADMYSLGIVFF 669
+ D++S G++ +
Sbjct: 183 YAGPEVDVWSCGVILY 198
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 60/271 (22%)
Query: 401 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 1 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
++ R RE+ + + H++++ +
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 85
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
T Q+ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 86 ------TPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERMSYLLYQMLXGIKHLHS 137
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
GIIHRDL P+NI + +KI DFGLA+
Sbjct: 138 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGTSFMMTPYVVT 181
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 182 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 211
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 57/250 (22%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ + L+ +G G +G V +N G +A+KKIRL+ + + +RE++ L L+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ Y DV + +L +
Sbjct: 60 SNIVKLY-----------------------------------DVIHTKKRL-----VLVF 79
Query: 543 EYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
E+ + L+++ + + + A Q++ G+A+ H + ++HRDL P N+ + ++
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA+ + +Y AP++ G K D+
Sbjct: 140 KIADFGLARAFGIP---------------VRKYTHEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 662 YSLGIVFFEL 671
+S+G +F E+
Sbjct: 185 WSVGCIFAEM 194
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLCGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 57/250 (22%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ + L+ +G G +G V +N G +A+KKIRL+ + + +RE++ L L+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ Y DV + +L +
Sbjct: 60 SNIVKLY-----------------------------------DVIHTKKRLVLVF----- 79
Query: 543 EYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
E+ + L+++ + + + A Q++ G+A+ H + ++HRDL P N+ + ++
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA+ + +Y AP++ G K D+
Sbjct: 140 KIADFGLARAFGIP---------------VRKYTHEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 662 YSLGIVFFEL 671
+S+G +F E+
Sbjct: 185 WSVGCIFAEM 194
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 103 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 128
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 129 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 187
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 188 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 229
Query: 666 IVFFEL 671
+ EL
Sbjct: 230 CIMAEL 235
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 93 HPNILRLY-GYFH---------------------------------------DATRVYLI 112
Query: 542 MEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 113 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 172
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + + D Y PE+ +G DEK D
Sbjct: 173 LKIADFGWSVHAPSSRRDDLCG-----------------TLDYLPPEMIEGRMH-DEKVD 214
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 215 LWSLGVLCYEF 225
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 121/295 (41%), Gaps = 72/295 (24%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 467
G+ S ++ ++ L+ +G G F V L ++ L G+ AVK K +L SL
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--- 57
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
++ REV L H ++V+ ++ ET
Sbjct: 58 QKLFREVRIXKVLNHPNIVKLFEV-IET-------------------------------- 84
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGII 584
E T LY+ EY + +VF+ ++ ++ A FRQIV + + H + I+
Sbjct: 85 ------EKT-LYLVXEYA--SGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFY 643
HRDL N+ DA +IKI DFG + +F +LD P Y
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPP-----------------Y 178
Query: 644 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP 695
APE+ QG + D++SLG++ + L PF +++ L+ K +P
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 57/250 (22%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ + L+ +G G +G V +N G +A+KKIRL+ + + +RE++ L L+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ Y DV + +L +
Sbjct: 60 SNIVKLY-----------------------------------DVIHTKKRL-----VLVF 79
Query: 543 EYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
E+ + L+++ + + + A Q++ G+A+ H + ++HRDL P N+ + ++
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA+ + +Y AP++ G K D+
Sbjct: 140 KIADFGLARAFGIP---------------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 662 YSLGIVFFEL 671
+S+G +F E+
Sbjct: 185 WSVGCIFAEM 194
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 104 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 129
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 130 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 188
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 189 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 230
Query: 666 IVFFEL 671
+ EL
Sbjct: 231 CIMAEL 236
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 61/278 (21%)
Query: 395 MVSSRV-SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYA 453
M S+V +QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A
Sbjct: 1 MSKSKVDNQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 454 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 513
+KK+ ++ R RE+ + + H++++ +
Sbjct: 54 IKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF--------------------- 92
Query: 514 STFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVE 573
T Q+ E +Y+ ME L QV + D E +L Q++
Sbjct: 93 -------------TPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLC 137
Query: 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXX 633
G+ H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGTSFM 181
Query: 634 XXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 182 MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 9 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 61
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 62 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 97
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 98 ----------TPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIK 145
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 146 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTP 189
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 190 YVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEM 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 80 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 105
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 106 GADLNNIVKCAKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 164
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 165 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 666 IVFFEL 671
+ EL
Sbjct: 207 CIMAEL 212
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 80 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 105
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 106 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 164
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 165 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 666 IVFFEL 671
+ EL
Sbjct: 207 CIMAEL 212
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 89 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 114
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 115 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILD 173
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 174 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 666 IVFFEL 671
+ EL
Sbjct: 216 CIMAEL 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 91 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 116
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 117 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 175
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 176 FGLARHTADEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 666 IVFFEL 671
+ EL
Sbjct: 218 CIMAEL 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 185 EVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 95 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 120
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 121 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILD 179
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 180 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 221
Query: 666 IVFFEL 671
+ EL
Sbjct: 222 CIMAEL 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 91 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 116
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 117 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 175
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 176 FGLARHTADEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 666 IVFFEL 671
+ EL
Sbjct: 218 CIMAEL 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 96 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 121
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 122 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 180
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 181 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 666 IVFFEL 671
+ EL
Sbjct: 223 CIMAEL 228
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 96 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 121
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 122 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 180
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 181 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 666 IVFFEL 671
+ EL
Sbjct: 223 CIMAEL 228
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMEP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 185 EVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEM 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 118/309 (38%), Gaps = 62/309 (20%)
Query: 406 PSVDSGSPNMSL-PSSRY--LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD- 461
P V P +L P Y L +F + +G G F V LDG A+KK+++ D
Sbjct: 11 PPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL 70
Query: 462 KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 521
++E+ L +L H +V++YY ++ E + + A
Sbjct: 71 MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE----------------LA 114
Query: 522 SSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581
+ D++ R ++ + + W F Q+ L H+H +
Sbjct: 115 DAGDLS-------------------RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR 155
Query: 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXY 641
++HRD+ P N+F A +K+GD GL +F
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFF---------------SSKTTAAHSLVGTP 200
Query: 642 FYTAPEI--EQGWPKIDEKADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPP 696
+Y +PE E G+ + K+D++SLG + +E L PF L ++ + PP
Sbjct: 201 YYMSPERIHENGY---NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP 257
Query: 697 SWVAKFSEQ 705
+SE+
Sbjct: 258 LPSDHYSEE 266
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 91 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 116
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 117 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 175
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 176 FGLARHTADEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 666 IVFFEL 671
+ EL
Sbjct: 218 CIMAEL 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 107 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 132
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 133 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 191
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 192 FGLARHTDDEMXGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 233
Query: 666 IVFFEL 671
+ EL
Sbjct: 234 CIMAEL 239
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 107 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 132
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 133 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 191
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 192 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 233
Query: 666 IVFFEL 671
+ EL
Sbjct: 234 CIMAEL 239
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 89 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 114
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 115 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 173
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 174 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 666 IVFFEL 671
+ EL
Sbjct: 216 CIMAEL 221
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 93
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 94 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 119
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 120 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 178
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 179 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 220
Query: 666 IVFFEL 671
+ EL
Sbjct: 221 CIMAEL 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 86 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 111
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 112 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 170
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 171 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 666 IVFFEL 671
+ EL
Sbjct: 213 CIMAEL 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 83 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 108
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 109 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 167
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 168 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 209
Query: 666 IVFFEL 671
+ EL
Sbjct: 210 CIMAEL 215
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 96 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 121
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 122 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 180
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 181 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 666 IVFFEL 671
+ EL
Sbjct: 223 CIMAEL 228
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKXQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 91 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 116
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 117 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 175
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 176 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 666 IVFFEL 671
+ EL
Sbjct: 218 CIMAEL 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGXVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 86 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 111
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 112 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 170
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 171 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 666 IVFFEL 671
+ EL
Sbjct: 213 CIMAEL 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 90 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 116 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 174
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 175 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 666 IVFFEL 671
+ EL
Sbjct: 217 CIMAEL 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 90 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 116 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 174
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 175 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 666 IVFFEL 671
+ EL
Sbjct: 217 CIMAEL 222
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 5 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 57
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 58 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 93
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 94 ----------TPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIK 141
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTP 185
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 186 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 6 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 58
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 59 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 94
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 95 ----------TPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIK 142
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 143 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMVP 186
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 187 FVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 103 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 128
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 129 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 187
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 188 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 229
Query: 666 IVFFEL 671
+ EL
Sbjct: 230 CIMAEL 235
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 104 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 129
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 130 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 188
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 189 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 230
Query: 666 IVFFEL 671
+ EL
Sbjct: 231 CIMAEL 236
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 82 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 107
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 108 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 166
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 167 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 208
Query: 666 IVFFEL 671
+ EL
Sbjct: 209 CIMAEL 214
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 95 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 120
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 121 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 179
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 180 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 221
Query: 666 IVFFEL 671
+ EL
Sbjct: 222 CIMAEL 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 53/249 (21%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L +++L+P+G G G V + + G + AVKK+ ++ R RE+ L + H
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++++ + T Q+ E +Y+ M
Sbjct: 81 KNIISLLNVF----------------------------------TPQKTLEEFQDVYLVM 106
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E L QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +K
Sbjct: 107 ELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 164
Query: 603 IGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMY 662
I DFGLA+ +Y APE+ G E D++
Sbjct: 165 ILDFGLAR----------------TASTNFMMTPYVVTRYYRAPEVILGM-GYKENVDIW 207
Query: 663 SLGIVFFEL 671
S+G + EL
Sbjct: 208 SVGCIMGEL 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 46/216 (21%)
Query: 408 VDSGSPNMSL----PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS 463
VD G+ N+ +R+ +D++ + LG G F V C K + YA K I K S
Sbjct: 11 VDLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLS 70
Query: 464 LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 523
+ ++ RE L+H ++VR + + E G D + G G L + S
Sbjct: 71 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG-GELFEDIVAREYYSE 129
Query: 524 ADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583
AD + H QI+E + HIH I
Sbjct: 130 ADAS--------------------------------------HCIHQILESVNHIHQHDI 151
Query: 584 IHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQ 616
+HRDL P N+ ++ +K+ DFGLA ++ EQ
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND---RILREVATLS 478
++ +++ ++ LG G FG V L + G+ A+K I K L +D RI RE++ L
Sbjct: 2 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII--NKKVLAKSDMQGRIEREISYLR 59
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L+H H+++ Y DV ++++
Sbjct: 60 LLRHPHIIKLY-----------------------------------DVIKSKDEI----- 79
Query: 539 YIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 598
+ +EY L D ++ A F+QI+ + + H I+HRDL P N+ D
Sbjct: 80 IMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH 139
Query: 599 NDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEK 658
++KI DFGL+ + D F Y APE+ G +
Sbjct: 140 LNVKIADFGLSNIM------TDGNFLKTSCGSPN----------YAAPEVISGKLYAGPE 183
Query: 659 ADMYSLGIVFF 669
D++S G++ +
Sbjct: 184 VDVWSCGVILY 194
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 86 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 111
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 112 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 170
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 171 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 666 IVFFEL 671
+ EL
Sbjct: 213 CIMAEL 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 89 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 114
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 115 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 173
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 174 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 666 IVFFEL 671
+ EL
Sbjct: 216 CIMAEL 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKXQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 61/278 (21%)
Query: 395 MVSSRV-SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYA 453
M S+V +QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A
Sbjct: 1 MSKSKVDNQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 454 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 513
+KK+ ++ R RE+ + + H++++ +
Sbjct: 54 IKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--------------------- 92
Query: 514 STFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVE 573
T Q+ E +Y+ ME L QV + D E +L Q++
Sbjct: 93 -------------TPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLC 137
Query: 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXX 633
G+ H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFM 181
Query: 634 XXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 182 MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 397 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK 456
S R + F+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK
Sbjct: 4 SKRDNNFY--SVEIGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 56
Query: 457 IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
+ ++ R RE+ + + H++++ +
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF------------------------ 92
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
T Q++ E +YI ME L QV + D E +L Q++ G+
Sbjct: 93 ----------TPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIK 140
Query: 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXX 636
H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMEP 184
Query: 637 XXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 185 EVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 81 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 106
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 107 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 165
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 166 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 207
Query: 666 IVFFEL 671
+ EL
Sbjct: 208 CIMAEL 213
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 80 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 105
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 106 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 164
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 165 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 666 IVFFEL 671
+ EL
Sbjct: 207 CIMAEL 212
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 81 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 106
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 107 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 165
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 166 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 207
Query: 666 IVFFEL 671
+ EL
Sbjct: 208 CIMAEL 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 68 HPNILRLY-GYFH---------------------------------------DATRVYLI 87
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 147
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + + D Y PE+ +G DEK D
Sbjct: 148 LKIADFGWSVHAPSSRRDTLCG-----------------TLDYLPPEMIEGRMH-DEKVD 189
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 190 LWSLGVLCYEF 200
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 90 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 116 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 174
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 175 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 666 IVFFEL 671
+ EL
Sbjct: 217 CIMAEL 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 60/271 (22%)
Query: 401 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 9 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 61
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
++ R RE+ + + H++++ +
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 93
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
T Q+ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 94 ------TPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 145
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
GIIHRDL P+NI + +KI DFGLA+
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVT 189
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 190 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 219
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 72 HPNILRLY-GYFH---------------------------------------DATRVYLI 91
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY PR + + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 92 LEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 151
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 152 LKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 193
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 194 LWSLGVLCYEF 204
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 60/271 (22%)
Query: 401 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 8 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
++ R RE+ + + H++++ +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 92
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
T Q+ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 93 ------TPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 144
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
GIIHRDL P+NI + +KI DFGLA+
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVT 188
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 189 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 218
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 60/271 (22%)
Query: 401 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 7 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 59
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
++ R RE+ + + H++++ +
Sbjct: 60 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 91
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
T Q+ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 92 ------TPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 143
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
GIIHRDL P+NI + +KI DFGLA+
Sbjct: 144 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVT 187
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 188 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 217
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 98/249 (39%), Gaps = 53/249 (21%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L ++ L+P+G G G V + + R+ A+KK+ ++ R RE+ + + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++++ + T Q++ E +YI M
Sbjct: 77 KNIIGLLNVF----------------------------------TPQKSLEEFQDVYIVM 102
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E L QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +K
Sbjct: 103 ELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160
Query: 603 IGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMY 662
I DFGLA+ +Y APE+ G E D++
Sbjct: 161 ILDFGLAR----------------TAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDLW 203
Query: 663 SLGIVFFEL 671
S+G + E+
Sbjct: 204 SVGCIMGEM 212
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 109/284 (38%), Gaps = 74/284 (26%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK------IRLKDKSLPVNDRILREVAT 476
L DF+ L+ LG G FG V L +++ +GR+YA+K +RLK ++R++ + T
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 536
H ++R MWG+ A F
Sbjct: 65 -----HPFIIR-----------------MWGTFQDAQQIF-------------------- 82
Query: 537 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+ M+Y L + F +A ++ L ++H + II+RDL P NI
Sbjct: 83 ---MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL 139
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
D IKI DFG AK++ D + Y APE+ P
Sbjct: 140 DKNGHIKITDFGFAKYVP------DVTYXLCGTPD------------YIAPEVVSTKP-Y 180
Query: 656 DEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPP 696
++ D +S GI+ +E+ + PF + + L + PP
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 60/271 (22%)
Query: 401 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 9 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 61
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
++ R RE+ + + H++++ +
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 93
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
T Q+ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 94 ------TPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 145
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
GIIHRDL P+NI + +KI DFGLA+
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVT 189
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 190 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 219
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 93 HPNILRLY-GYFH---------------------------------------DATRVYLI 112
Query: 542 MEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 113 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 172
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 173 LKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 214
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 215 LWSLGVLCYEF 225
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 86/292 (29%)
Query: 417 LPSSRY-LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILR 472
+P ++ ++DF+ ++PLG G FG+V L + K + A+K K +L+ + V ++ R
Sbjct: 6 MPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG--VEHQLRR 63
Query: 473 EVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 532
E+ S L+H +++R Y + F +R
Sbjct: 64 EIEIQSHLRHPNILRMY------------------------NYFHDRKR----------- 88
Query: 533 LESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
+Y+ +E+ PR L + + + FD++ + ++ + L + H + +IHRD+ P
Sbjct: 89 -----IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPE 143
Query: 592 NIFFDARNDIKIGDFG-------LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYT 644
N+ + ++KI DFG L + LD Y
Sbjct: 144 NLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLD------------------------YL 179
Query: 645 APEIEQGWPKIDEKADMYSLGIVFFELW-------HPFSTAMERQIVLSDLK 689
PE+ +G DEK D++ G++ +E P T R+IV DLK
Sbjct: 180 PPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 72 HPNILRLY-GYFH---------------------------------------DATRVYLI 91
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY PR + + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 92 LEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 151
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 152 LKIADFGWS-----------------VHAPSSRRXXLXGTLDYLPPEMIEGRMH-DEKVD 193
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 194 LWSLGVLCYEF 204
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 60/271 (22%)
Query: 401 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 2 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 54
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
++ R RE+ + + H++++ +
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 86
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
T Q+ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 87 ------TPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 138
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
GIIHRDL P+NI + +KI DFGLA+
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVT 182
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 183 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 212
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 70 HPNILRLY-GYFH---------------------------------------DATRVYLI 89
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 149
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + + D Y PE+ +G DEK D
Sbjct: 150 LKIADFGWSVHAPSSRRDDLCG-----------------TLDYLPPEMIEGRMH-DEKVD 191
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 192 LWSLGVLCYEF 202
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 60/271 (22%)
Query: 401 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 2 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 54
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
++ R RE+ + + H++++ +
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 86
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
T Q+ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 87 ------TPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 138
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
GIIHRDL P+NI + +KI DFGLA+
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVT 182
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 183 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 212
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
+GLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 YGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 60/271 (22%)
Query: 401 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 1 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
++ R RE+ + + H++++ +
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 85
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
T Q+ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 86 ------TPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 137
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
GIIHRDL P+NI + +KI DFGLA+
Sbjct: 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVT 181
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y APE+ G E D++S+G + E+
Sbjct: 182 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 211
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 71/288 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 87
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 88 DHPFFVKLY------------------------------------FTFQDDE----KLYF 107
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 108 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 167
Query: 600 DIKIGDFGLAKFLKLEQLDQDA-AFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKID 656
I+I DFG AK L E A AF Y +PE+ E+ K
Sbjct: 168 HIQITDFGTAKVLSPESKQARANAFVGTAQ--------------YVSPELLTEKSACK-- 211
Query: 657 EKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 212 -SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 258
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 84 HPNILRLY-GYFH---------------------------------------DATRVYLI 103
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 104 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 163
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 164 LKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 205
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 206 LWSLGVLCYEF 216
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 68 HPNILRLY-GYFH---------------------------------------DATRVYLI 87
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 147
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + P Y PE+ +G DEK D
Sbjct: 148 LKIADFGWS-----------CHAPSSRRTTLSGTLD------YLPPEMIEGRMH-DEKVD 189
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 190 LWSLGVLCYEF 200
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 125/323 (38%), Gaps = 80/323 (24%)
Query: 390 VFHQKMVSSRVSQF--WKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKL 447
VF + + S + ++F WK N+ L +NDF + +G GGFG V C+
Sbjct: 161 VFQKFIESDKFTRFCQWK--------NVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKAD 212
Query: 448 DGRHYAVK---KIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501
G+ YA+K K R+K K +L +N+RI+ ++ +S +V A+ F
Sbjct: 213 TGKMYAMKCLDKKRIKMKQGETLALNERIM--LSLVSTGDCPFIVCMSYAFHTPDKLSFI 270
Query: 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK 561
D M G G L + S AD+ Y
Sbjct: 271 LDLMNG-GDLHYHLSQHGVFSEADMR----------FYAA-------------------- 299
Query: 562 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
+I+ GL H+H + +++RDL P NI D ++I D GLA D
Sbjct: 300 --------EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSK 344
Query: 622 AFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF--- 675
P + Y APE+ Q D AD +SLG + F+L PF
Sbjct: 345 KKP----------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394
Query: 676 STAMERQIVLSDLKQKGELPPSW 698
T + +I L ELP S+
Sbjct: 395 KTKDKHEIDRMTLTMAVELPDSF 417
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 125/323 (38%), Gaps = 80/323 (24%)
Query: 390 VFHQKMVSSRVSQF--WKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKL 447
VF + + S + ++F WK N+ L +NDF + +G GGFG V C+
Sbjct: 161 VFQKFIESDKFTRFCQWK--------NVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKAD 212
Query: 448 DGRHYAVK---KIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501
G+ YA+K K R+K K +L +N+RI+ ++ +S +V A+ F
Sbjct: 213 TGKMYAMKCLDKKRIKMKQGETLALNERIM--LSLVSTGDCPFIVCMSYAFHTPDKLSFI 270
Query: 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK 561
D M G G L + S AD+ Y
Sbjct: 271 LDLMNG-GDLHYHLSQHGVFSEADMR----------FYAA-------------------- 299
Query: 562 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
+I+ GL H+H + +++RDL P NI D ++I D GLA D
Sbjct: 300 --------EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSK 344
Query: 622 AFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF--- 675
P + Y APE+ Q D AD +SLG + F+L PF
Sbjct: 345 KKP----------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394
Query: 676 STAMERQIVLSDLKQKGELPPSW 698
T + +I L ELP S+
Sbjct: 395 KTKDKHEIDRMTLTMAVELPDSF 417
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 60/256 (23%)
Query: 418 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVAT 476
P L DFE +PLG G FG+V L + K A+K + + + + V ++ REV
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 536
S L+H +++R Y +F ++T
Sbjct: 62 QSHLRHPNILRLY-GYFH---------------------------------------DAT 81
Query: 537 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+Y+ +EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+
Sbjct: 82 RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
+ ++KI DFG + Y PE+ +G
Sbjct: 142 GSAGELKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH- 183
Query: 656 DEKADMYSLGIVFFEL 671
DEK D++SLG++ +E
Sbjct: 184 DEKVDLWSLGVLCYEF 199
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 125/323 (38%), Gaps = 80/323 (24%)
Query: 390 VFHQKMVSSRVSQF--WKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKL 447
VF + + S + ++F WK N+ L +NDF + +G GGFG V C+
Sbjct: 161 VFQKFIESDKFTRFCQWK--------NVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKAD 212
Query: 448 DGRHYAVK---KIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501
G+ YA+K K R+K K +L +N+RI+ ++ +S +V A+ F
Sbjct: 213 TGKMYAMKCLDKKRIKMKQGETLALNERIM--LSLVSTGDCPFIVCMSYAFHTPDKLSFI 270
Query: 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK 561
D M G G L + S AD+ Y
Sbjct: 271 LDLMNG-GDLHYHLSQHGVFSEADMR----------FYAA-------------------- 299
Query: 562 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
+I+ GL H+H + +++RDL P NI D ++I D GLA D
Sbjct: 300 --------EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSK 344
Query: 622 AFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF--- 675
P + Y APE+ Q D AD +SLG + F+L PF
Sbjct: 345 KKP----------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394
Query: 676 STAMERQIVLSDLKQKGELPPSW 698
T + +I L ELP S+
Sbjct: 395 KTKDKHEIDRMTLTMAVELPDSF 417
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 110/287 (38%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 92
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 93 DHPFFVKLY------------------------------------FTFQDDE----KLYF 112
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 113 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 172
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 173 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 216
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P ++ K
Sbjct: 217 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 72 HPNILRLY-GYFH---------------------------------------DATRVYLI 91
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 92 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 151
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 152 LKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 193
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 194 LWSLGVLCYEF 204
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 125/323 (38%), Gaps = 80/323 (24%)
Query: 390 VFHQKMVSSRVSQF--WKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKL 447
VF + + S + ++F WK N+ L +NDF + +G GGFG V C+
Sbjct: 160 VFQKFIESDKFTRFCQWK--------NVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKAD 211
Query: 448 DGRHYAVK---KIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501
G+ YA+K K R+K K +L +N+RI+ ++ +S +V A+ F
Sbjct: 212 TGKMYAMKCLDKKRIKMKQGETLALNERIM--LSLVSTGDCPFIVCMSYAFHTPDKLSFI 269
Query: 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK 561
D M G G L + S AD+ Y
Sbjct: 270 LDLMNG-GDLHYHLSQHGVFSEADMR----------FYAA-------------------- 298
Query: 562 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
+I+ GL H+H + +++RDL P NI D ++I D GLA D
Sbjct: 299 --------EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSK 343
Query: 622 AFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF--- 675
P + Y APE+ Q D AD +SLG + F+L PF
Sbjct: 344 KKP----------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 393
Query: 676 STAMERQIVLSDLKQKGELPPSW 698
T + +I L ELP S+
Sbjct: 394 KTKDKHEIDRMTLTMAVELPDSF 416
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F +ST +Y+
Sbjct: 67 HPNILRLY-GYFH---------------------------------------DSTRVYLI 86
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGE 146
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 147 LKIADFGWS-----------------VHAPSSRRAALCGTLDYLPPEMIEGRMH-DEKVD 188
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 189 LWSLGVLCYEF 199
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 70 HPNILRLY-GYFH---------------------------------------DATRVYLI 89
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 149
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 150 LKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 191
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 192 LWSLGVLCYEF 202
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 70 HPNILRLY-GYFH---------------------------------------DATRVYLI 89
Query: 542 MEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 149
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 150 LKIADFGWS-----------------VHAPSSRRAALCGTLDYLPPEMIEGRMH-DEKVD 191
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 192 LWSLGVLCYEF 202
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 107/277 (38%), Gaps = 74/277 (26%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR----- 458
V GS NM+ R+L + LQ LG G FG V +C+ G AVKK++
Sbjct: 15 VPRGSHNMTQFEERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 71
Query: 459 -LKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 517
L+D RE+ L LQH ++V+Y + G +
Sbjct: 72 HLRD--------FEREIEILKSLQHDNIVKYKGVCYSAGRRN------------------ 105
Query: 518 NRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGL 575
L + MEY P +LR + + + D QI +G+
Sbjct: 106 --------------------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXX 635
++ + IHRDL NI + N +KIGDFGL K L ++ P
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------ 199
Query: 636 XXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 672
F+ APE K +D++S G+V +EL+
Sbjct: 200 ------FWYAPE-SLTESKFSVASDVWSFGVVLYELF 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 111/288 (38%), Gaps = 71/288 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 89
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 90 DHPFFVKLY------------------------------------FTFQDDE----KLYF 109
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 110 GLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 600 DIKIGDFGLAKFLKLEQLDQDA-AFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKID 656
I+I DFG AK L E A +F Y +PE+ E+ K
Sbjct: 170 HIQITDFGTAKVLSPESKQARANSFVGTAQ--------------YVSPELLTEKSASK-- 213
Query: 657 EKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 214 -SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 260
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 38/208 (18%)
Query: 405 KPSVDSGSPNMSLPSSRY--LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK 462
K VD+ ++ + S + L +++L+P+G G G V + + G + AVKK+ +
Sbjct: 3 KSKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ 62
Query: 463 SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAAS 522
+ R RE+ L + H++++ +
Sbjct: 63 NQTHAKRAYRELVLLKCVNHKNIISLLNVF------------------------------ 92
Query: 523 SADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582
T Q+ E +Y+ ME L QV D E +L Q++ G+ H+H G
Sbjct: 93 ----TPQKTLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 583 IIHRDLTPNNIFFDARNDIKIGDFGLAK 610
IIHRDL P+NI + +KI DFGLA+
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 113/293 (38%), Gaps = 67/293 (22%)
Query: 418 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILRE 473
P + DF+ + LG G F VVL + R YA+K + +K+ +P + RE
Sbjct: 4 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRE 60
Query: 474 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
+SRL H V+ Y F+ + G S +G L
Sbjct: 61 RDVMSRLDHPFFVKLYFT-FQDDEKLYFGLSYAKNGELL--------------------- 98
Query: 534 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
+ +R++ FD+ +IV L ++HG+GIIHRDL P NI
Sbjct: 99 -------------KYIRKI----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 141
Query: 594 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQG 651
+ I+I DFG AK L E A Y +PE+ E+
Sbjct: 142 LLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKS 188
Query: 652 WPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
K +D+++LG + ++L PF E I +K + + P + K
Sbjct: 189 ACK---SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 238
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 113/293 (38%), Gaps = 67/293 (22%)
Query: 418 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILRE 473
P + DF+ + LG G F VVL + R YA+K + +K+ +P + RE
Sbjct: 1 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRE 57
Query: 474 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
+SRL H V+ Y F+ + G S +G L
Sbjct: 58 RDVMSRLDHPFFVKLYFT-FQDDEKLYFGLSYAKNGELL--------------------- 95
Query: 534 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
+ +R++ FD+ +IV L ++HG+GIIHRDL P NI
Sbjct: 96 -------------KYIRKI----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 138
Query: 594 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQG 651
+ I+I DFG AK L E A Y +PE+ E+
Sbjct: 139 LLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKS 185
Query: 652 WPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
K +D+++LG + ++L PF E I +K + + P + K
Sbjct: 186 ACK---SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 235
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 113/293 (38%), Gaps = 67/293 (22%)
Query: 418 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILRE 473
P + DF+ + LG G F VVL + R YA+K + +K+ +P + RE
Sbjct: 3 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRE 59
Query: 474 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
+SRL H V+ Y F+ + G S +G L
Sbjct: 60 RDVMSRLDHPFFVKLYFT-FQDDEKLYFGLSYAKNGELL--------------------- 97
Query: 534 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
+ +R++ FD+ +IV L ++HG+GIIHRDL P NI
Sbjct: 98 -------------KYIRKI----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 140
Query: 594 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQG 651
+ I+I DFG AK L E A Y +PE+ E+
Sbjct: 141 LLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKS 187
Query: 652 WPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
K +D+++LG + ++L PF E I +K + + P + K
Sbjct: 188 ACK---SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 237
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 60/256 (23%)
Query: 418 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVAT 476
P L DFE +PLG G FG+V L + K A+K + + + + V ++ REV
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 536
S L+H +++R Y +F ++T
Sbjct: 62 QSHLRHPNILRLY-GYFH---------------------------------------DAT 81
Query: 537 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
+Y+ +EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+
Sbjct: 82 RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKI 655
+ ++KI DFG + Y PE+ +G
Sbjct: 142 GSAGELKIADFGWS-----------------VHAPSSRRTELCGTLDYLPPEMIEGRMH- 183
Query: 656 DEKADMYSLGIVFFEL 671
DEK D++SLG++ +E
Sbjct: 184 DEKVDLWSLGVLCYEF 199
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 107/277 (38%), Gaps = 74/277 (26%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR----- 458
V GS NM+ R+L + LQ LG G FG V +C+ G AVKK++
Sbjct: 15 VPRGSHNMTQFEERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 71
Query: 459 -LKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 517
L+D RE+ L LQH ++V+Y + G +
Sbjct: 72 HLRD--------FEREIEILKSLQHDNIVKYKGVCYSAGRRN------------------ 105
Query: 518 NRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGL 575
L + MEY P +LR + + + D QI +G+
Sbjct: 106 --------------------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXX 635
++ + IHRDL NI + N +KIGDFGL K L ++ P
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------ 199
Query: 636 XXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 672
F+ APE K +D++S G+V +EL+
Sbjct: 200 ------FWYAPE-SLTESKFSVASDVWSFGVVLYELF 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 113/293 (38%), Gaps = 67/293 (22%)
Query: 418 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILRE 473
P + DF+ + LG G F VVL + R YA+K + +K+ +P + RE
Sbjct: 2 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRE 58
Query: 474 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
+SRL H V+ Y F+ + G S +G L
Sbjct: 59 RDVMSRLDHPFFVKLYFT-FQDDEKLYFGLSYAKNGELL--------------------- 96
Query: 534 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
+ +R++ FD+ +IV L ++HG+GIIHRDL P NI
Sbjct: 97 -------------KYIRKI----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 139
Query: 594 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQG 651
+ I+I DFG AK L E A Y +PE+ E+
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKS 186
Query: 652 WPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
K +D+++LG + ++L PF E I +K + + P + K
Sbjct: 187 ACK---SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 236
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 95/246 (38%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 113 I----------------------GLLDVFTPATSLEEFNDV------------YLVTHLM 138
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 139 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 197
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W + D++S+G
Sbjct: 198 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNMTVDIWSVG 239
Query: 666 IVFFEL 671
+ EL
Sbjct: 240 CIMAEL 245
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 109/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 89
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 90 DHPFFVKLY------------------------------------FTFQDDE----KLYF 109
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSAXK--- 213
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK 260
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 109/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 89
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 90 DHPFFVKLY------------------------------------FTFQDDE----KLYF 109
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 213
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 67 HPNILRLY-GYFH---------------------------------------DATRVYLI 86
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 146
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 147 LKIADFGWS-----------------VHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEKVD 188
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 189 LWSLGVLCYEF 199
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 71 HPNILRLY-GYFH---------------------------------------DATRVYLI 90
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 91 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 150
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 151 LKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 192
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 193 LWSLGVLCYEF 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 60/260 (23%)
Query: 414 NMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILR 472
+MS L DFE +PLG G FG+V L + K A+K + + + + V ++ R
Sbjct: 3 HMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 473 EVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 532
EV S L+H +++R Y +F
Sbjct: 63 EVEIQSHLRHPNILRLY-GYFH-------------------------------------- 83
Query: 533 LESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
++T +Y+ +EY P T+ + + FD++ ++ L++ H + +IHRD+ P
Sbjct: 84 -DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 142
Query: 592 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
N+ + ++KI DFG + Y PE+ +G
Sbjct: 143 NLLLGSAGELKIADFGWS-----------------VHAPSSRRTDLCGTLDYLPPEMIEG 185
Query: 652 WPKIDEKADMYSLGIVFFEL 671
DEK D++SLG++ +E
Sbjct: 186 RMH-DEKVDLWSLGVLCYEF 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 69 HPNILRLY-GYFH---------------------------------------DATRVYLI 88
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 89 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 148
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 149 LKIADFGWS-----------------VHAPSSRRXXLCGTLDYLPPEMIEGRMH-DEKVD 190
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 191 LWSLGVLCYEF 201
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 68 HPNILRLY-GYFH---------------------------------------DATRVYLI 87
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 147
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 148 LKIADFGWS-----------------VHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEKVD 189
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 190 LWSLGVLCYEF 200
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 59/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQ 481
+ + +L LG G + V K+KL A+K+IRL+ ++ P +REV+ L L+
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCT--AIREVSLLKDLK 58
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H ++V + D+ E L +
Sbjct: 59 HANIVTLH-----------------------------------DIIHTEKSLTLVF---- 79
Query: 542 MEYCPRTLRQVFESYDHFDKELAWHLFR-QIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
EY + L+Q + + LF Q++ GLA+ H Q ++HRDL P N+ + R +
Sbjct: 80 -EYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE 138
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+K+ DFGLA+ + D +Y P+I G + D
Sbjct: 139 LKLADFGLARAKSIPTKTYD---------------NEVVTLWYRPPDILLGSTDYSTQID 183
Query: 661 MYSLGIVFFEL 671
M+ +G +F+E+
Sbjct: 184 MWGVGCIFYEM 194
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 67 HPNILRLY-GYFH---------------------------------------DATRVYLI 86
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 146
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 147 LKIADFGWS-----------------VHAPSSRRAALCGTLDYLPPEMIEGRMH-DEKVD 188
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 189 LWSLGVLCYEF 199
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 66 HPNILRLY-GYFH---------------------------------------DATRVYLI 85
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 86 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 145
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 146 LKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 187
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 188 LWSLGVLCYEF 198
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 111/288 (38%), Gaps = 71/288 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 90
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 91 DHPFFVKLY------------------------------------FTFQDDE----KLYF 110
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 111 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 170
Query: 600 DIKIGDFGLAKFLKLEQLDQDA-AFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKID 656
I+I DFG AK L E A +F Y +PE+ E+ K
Sbjct: 171 HIQITDFGTAKVLSPESKQARANSFVGTAQ--------------YVSPELLTEKSACK-- 214
Query: 657 EKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 215 -SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 261
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 109/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 89
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 90 DHPFFVKLY------------------------------------FTFQDDE----KLYF 109
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 213
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 260
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 109/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 87
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 88 DHPFFVKLY------------------------------------FTFQDDE----KLYF 107
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 108 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 167
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 168 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 211
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 258
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 86/292 (29%)
Query: 417 LPSSRY-LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILR 472
+P ++ ++DF+ +PLG G FG+V L + K + A+K K +L+ + V ++ R
Sbjct: 7 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG--VEHQLRR 64
Query: 473 EVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 532
E+ S L+H +++R Y + F +R
Sbjct: 65 EIEIQSHLRHPNILRMY------------------------NYFHDRKR----------- 89
Query: 533 LESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
+Y+ +E+ PR L + + + FD++ + ++ + L + H + +IHRD+ P
Sbjct: 90 -----IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPE 144
Query: 592 NIFFDARNDIKIGDFG-------LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYT 644
N+ + ++KI DFG L + LD Y
Sbjct: 145 NLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLD------------------------YL 180
Query: 645 APEIEQGWPKIDEKADMYSLGIVFFELW-------HPFSTAMERQIVLSDLK 689
PE+ +G DEK D++ G++ +E P T R+IV DLK
Sbjct: 181 PPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 109/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 87
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 88 DHPFFVKLY------------------------------------FTFQDDE----KLYF 107
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 108 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 167
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 168 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 211
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 258
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 109/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 90
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 91 DHPFFVKLY------------------------------------FTFQDDE----KLYF 110
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 111 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 170
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 171 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 214
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 215 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 261
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 109/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 89
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 90 DHPFFVKLY------------------------------------FTFQDDE----KLYF 109
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 213
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 260
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 86/292 (29%)
Query: 417 LPSSRY-LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILR 472
+P ++ ++DF+ +PLG G FG+V L + K + A+K K +L+ + V ++ R
Sbjct: 6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG--VEHQLRR 63
Query: 473 EVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 532
E+ S L+H +++R Y + F +R
Sbjct: 64 EIEIQSHLRHPNILRMY------------------------NYFHDRKR----------- 88
Query: 533 LESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
+Y+ +E+ PR L + + + FD++ + ++ + L + H + +IHRD+ P
Sbjct: 89 -----IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPE 143
Query: 592 NIFFDARNDIKIGDFG-------LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYT 644
N+ + ++KI DFG L + LD Y
Sbjct: 144 NLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLD------------------------YL 179
Query: 645 APEIEQGWPKIDEKADMYSLGIVFFELW-------HPFSTAMERQIVLSDLK 689
PE+ +G DEK D++ G++ +E P T R+IV DLK
Sbjct: 180 PPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 67 HPNILRLY-GYFH---------------------------------------DATRVYLI 86
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 146
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 147 LKIADFGWS-----------------VHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEKVD 188
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 189 LWSLGVLCYEF 199
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 70 HPNILRLY-GYFH---------------------------------------DATRVYLI 89
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 149
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + P Y PE+ +G DEK D
Sbjct: 150 LKIADFGWS-----------VHAPSSRRTTLCGTLD------YLPPEMIEGRMH-DEKVD 191
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 192 LWSLGVLCYEF 202
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 109/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 89
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 90 DHPFFVKLY------------------------------------FTFQDDE----KLYF 109
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 213
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 72 HPNILRLY-GYFH---------------------------------------DATRVYLI 91
Query: 542 MEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 92 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 151
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE +G DEK D
Sbjct: 152 LKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEXIEGRXH-DEKVD 193
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 194 LWSLGVLCYEF 204
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ +LQ +G G +G V + + A+KKI + R LRE+ L R +H++V
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQT-YCQRTLREIQILLRFRHENV 103
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D L +ST + DV YI +
Sbjct: 104 I---------GIRDI----------LRASTLE----AMRDV------------YIVQDLM 128
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L ++ +S + + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 129 ETDLYKLLKSQQLSNDHICYFLY-QILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICD 187
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E D +Y APEI + D++S+G
Sbjct: 188 FGLARIADPEH-DHTGFL-----------TEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 666 IVFFEL 671
+ E+
Sbjct: 236 CILAEM 241
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILG 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 67 HPNILRLY-GYFH---------------------------------------DATRVYLI 86
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 146
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 147 LKIADFGWS-----------------VHAPSSRRTXLCGTLDYLPPEMIEGRMH-DEKVD 188
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 189 LWSLGVLCYEF 199
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 70/257 (27%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI-LREVATLSRLQ 481
+ +E++ +G G +G V C+N+ G+ A+KK L+ + PV +I LRE+ L +L+
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLK 60
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H ++V + + L++
Sbjct: 61 HPNLVNLLEVF----------------------------------------RRKRRLHLV 80
Query: 542 MEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
EYC T+ + Y +H K + W Q ++ + H IHRD+ P NI
Sbjct: 81 FEYCDHTVLHELDRYQRGVPEHLVKSITW----QTLQAVNFCHKHNCIHRDVKPENILIT 136
Query: 597 ARNDIKIGDFGLAKFLK--LEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK 654
+ IK+ DFG A+ L + D + A +Y +PE+ G +
Sbjct: 137 KHSVIKLCDFGFARLLTGPSDYYDDEVA-----------------TRWYRSPELLVGDTQ 179
Query: 655 IDEKADMYSLGIVFFEL 671
D++++G VF EL
Sbjct: 180 YGPPVDVWAIGCVFAEL 196
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
F LA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 FYLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DF+ +PLG G FG+V L + + A+K + + + + V ++ REV S L+
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 71 HPNILRLY-GYFH---------------------------------------DATRVYLI 90
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 91 LEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE 150
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + + D Y PE+ +G DEK D
Sbjct: 151 LKIADFGWSVHAPSSRRDTLCG-----------------TLDYLPPEMIEGRMH-DEKVD 192
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 193 LWSLGVLCYEF 203
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 111/286 (38%), Gaps = 67/286 (23%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 94
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y F+ + G S +G L
Sbjct: 95 DHPFFVKLYFC-FQDDEKLYFGLSYAKNGELL---------------------------- 125
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+ +R++ FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 126 ------KYIRKI----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH 175
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDEK 658
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 176 IQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK---S 219
Query: 659 ADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 220 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 265
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 113/287 (39%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 86
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y F+ + G S +G L
Sbjct: 87 DHPFFVKLYFT-FQDDEKLYFGLSYAKNGELL---------------------------- 117
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+ +R++ FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 118 ------KYIRKI----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH 167
Query: 601 IKIGDFGLAKFLKLEQLDQDA-AFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A +F Y +PE+ E+ K
Sbjct: 168 IQITDFGTAKVLSPESKQARANSFVGTAQ--------------YVSPELLTEKSACK--- 210
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 211 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 257
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/294 (25%), Positives = 115/294 (39%), Gaps = 66/294 (22%)
Query: 414 NMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDR 469
+M+ PS +L+D EL + LG GG V L ++ R AVK +R +D S + R
Sbjct: 20 HMTTPS--HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL--R 75
Query: 470 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 529
RE + L H +V Y TG+
Sbjct: 76 FRREAQNAAALNHPAIVAVYD------------------------------------TGE 99
Query: 530 ENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
YI MEY TLR + + + A + + L H GIIHRD+
Sbjct: 100 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 159
Query: 589 TPNNIFFDARNDIKIGDFGLAKFL--KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI A N +K+ DFG+A+ + + Q AA Y +P
Sbjct: 160 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ--------------YLSP 205
Query: 647 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS 697
E +G +D ++D+YSLG V +E+ PF+ + +++ +PPS
Sbjct: 206 EQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED-PIPPS 257
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 109/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 71
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 72 DHPFFVKLY------------------------------------FTFQDDE----KLYF 91
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 92 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 151
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 152 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 195
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 196 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 242
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 47/213 (22%)
Query: 407 SVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV 466
VD G+ N+ S L FEEL G G F V C L G+ YA K I K S
Sbjct: 10 GVDLGTENLYFQSMYQL--FEEL---GKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARD 64
Query: 467 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 526
+ ++ RE L+H ++VR + + E G D + G G L + S AD
Sbjct: 65 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG-GELFEDIVAREYYSEADA 123
Query: 527 TGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586
+ H +QI+E + H H G++HR
Sbjct: 124 S--------------------------------------HCIQQILEAVLHCHQMGVVHR 145
Query: 587 DLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQ 616
DL P N+ ++ +K+ DFGLA ++ EQ
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
GLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 AGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 70 HPNILRLY-GYFH---------------------------------------DATRVYLI 89
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 149
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 150 LKIADFGWS-----------------VHAPSSRRXXLCGTLDYLPPEMIEGRMH-DEKVD 191
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 192 LWSLGVLCYEF 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 67 HPNILRLY-GYFH---------------------------------------DATRVYLI 86
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 146
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 147 LKIADFGWS-----------------VHAPSSRRXXLCGTLDYLPPEMIEGRMH-DEKVD 188
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 189 LWSLGVLCYEF 199
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 111/286 (38%), Gaps = 67/286 (23%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VVL + R YA+K + +K+ +P + RE +SRL
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 86
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y F+ + G S +G L
Sbjct: 87 DHPFFVKLYFT-FQDDEKLYFGLSYAKNGELL---------------------------- 117
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+ +R++ FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 118 ------KYIRKI----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH 167
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDEK 658
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 168 IQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK---S 211
Query: 659 ADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 212 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 257
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 64 HPNILRLY-GYFH---------------------------------------DATRVYLI 83
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 84 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 143
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + Y PE+ +G DEK D
Sbjct: 144 LKIADFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 185
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 186 LWSLGVLCYEF 196
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 69 HPNILRLY-GYFH---------------------------------------DATRVYLI 88
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 89 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 148
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI +FG + Y PE+ +G DEK D
Sbjct: 149 LKIANFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 190
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 191 LWSLGVLCYEF 201
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
GLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 RGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 101/258 (39%), Gaps = 61/258 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
++++ + LG G F V C G+ YA K I K S + ++ RE L+H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++VR + + E G D + G G L + S AD +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTG-GELFEDIVAREYYSEADAS---------------- 106
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND--- 600
H +QI+E + H H GI+HRDL P N+ +++
Sbjct: 107 ----------------------HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAA 144
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+K+ DFGLA + Q DQ A F Y +PE+ + P + D
Sbjct: 145 VKLADFGLAIEV---QGDQQAWFGFAGTPG------------YLSPEVLRKDP-YGKPVD 188
Query: 661 MYSLGIVFFEL---WHPF 675
M++ G++ + L + PF
Sbjct: 189 MWACGVILYILLVGYPPF 206
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
GLA+ E A +Y APEI W ++ D++S+G
Sbjct: 169 GGLARHTDDEMTGYVAT------------------RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 72/284 (25%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILREVATLSRLQH 482
FE + LG G F VVL + K G+ +AVK K LK K + + E+A L +++H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN----EIAVLRKIKH 79
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+++V + D+ N L YL +Q+
Sbjct: 80 ENIV-----------------------------------ALEDIYESPNHL---YLVMQL 101
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DARN 599
++ E + +K+ A L RQ+++ + ++H GI+HRDL P N+ + D +
Sbjct: 102 VSGGELFDRIVEKGFYTEKD-ASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEES 160
Query: 600 DIKIGDFGLAKFL-KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEK 658
I I DFGL+K K + + P Y APE+ P +
Sbjct: 161 KIMISDFGLSKMEGKGDVMSTACGTPG-----------------YVAPEVLAQKP-YSKA 202
Query: 659 ADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL-PPSW 698
D +S+G++ + L + PF + ++ LK + E P W
Sbjct: 203 VDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYW 246
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 104/257 (40%), Gaps = 62/257 (24%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-------PVNDRILREV 474
Y + + PLG G FG V +K + VK I+ K+K L P ++ E+
Sbjct: 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEI 80
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
A LSR++H ++++ V D F N+ + + L+
Sbjct: 81 AILSRVEHANIIK---------VLDI---------------FENQGFFQLVMEKHGSGLD 116
Query: 535 STYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 594
L+ ++ PR D+ LA ++FRQ+V + ++ + IIHRD+ NI
Sbjct: 117 ---LFAFIDRHPR-----------LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIV 162
Query: 595 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK 654
IK+ DFG A +L+ +L Y APE+ G P
Sbjct: 163 IAEDFTIKLIDFGSAAYLERGKL----------------FYTFCGTIEYCAPEVLMGNPY 206
Query: 655 IDEKADMYSLGIVFFEL 671
+ +M+SLG+ + L
Sbjct: 207 RGPELEMWSLGVTLYTL 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 72/297 (24%)
Query: 410 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK-KIRLKDK--SLPV 466
SG+P++ L ++DFE +PLG G FG+V L + K H+ V K+ K + V
Sbjct: 10 SGTPDI-LTRHFTIDDFEIGRPLGKGKFGNVYLAREK--KSHFIVALKVLFKSQIEKEGV 66
Query: 467 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 526
++ RE+ + L H +++R Y +++
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYD-------------------------------- 94
Query: 527 TGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585
+Y+ +EY PR L + + FD++ + ++ + L + HG+ +IH
Sbjct: 95 --------RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIH 146
Query: 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTA 645
RD+ P N+ + ++KI DFG + Y
Sbjct: 147 RDIKPENLLLGLKGELKIADFGWS-----------------VHAPSLRRKTMCGTLDYLP 189
Query: 646 PEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAME----RQIVLSDLKQKGELP 695
PE+ +G +EK D++ +G++ +EL PF +A R+IV DLK +P
Sbjct: 190 PEMIEGRMH-NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVP 245
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 42/202 (20%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 470
GS M S+++ ++++ + LG G F V C +K G +A K I K S ++
Sbjct: 16 GSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL 75
Query: 471 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 530
RE +LQH ++VR + + E D + G G L + S AD +
Sbjct: 76 EREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG-GELFEDIVAREFYSEADAS--- 131
Query: 531 NKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTP 590
H +QI+E +A+ H GI+HR+L P
Sbjct: 132 -----------------------------------HCIQQILESIAYCHSNGIVHRNLKP 156
Query: 591 NNIFFDARND---IKIGDFGLA 609
N+ ++ +K+ DFGLA
Sbjct: 157 ENLLLASKAKGAAVKLADFGLA 178
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 58/251 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
++++ + LG G F V C G+ YA K I K S + ++ RE L+H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++VR + + E G D + G G L + S AD +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTG-GELFEDIVAREYYSEADAS---------------- 106
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND--- 600
H +QI+E + H H GI+HRDL P N+ +++
Sbjct: 107 ----------------------HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAA 144
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+K+ DFGLA + Q DQ A F Y +PE+ + P + D
Sbjct: 145 VKLADFGLAIEV---QGDQQAWFGFAGTPG------------YLSPEVLRKDP-YGKPVD 188
Query: 661 MYSLGIVFFEL 671
M++ G++ + L
Sbjct: 189 MWACGVILYIL 199
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DFE +PLG G FG+V L + K A+K + + + + V ++ REV S L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 70 HPNILRLY-GYFH---------------------------------------DATRVYLI 89
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 149
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI +FG + Y PE+ +G DEK D
Sbjct: 150 LKIANFGWS-----------------VHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVD 191
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 192 LWSLGVLCYEF 202
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 108/287 (37%), Gaps = 69/287 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREVATLSRL 480
DF+ + LG G F VL + R YA+K + +K+ +P + RE +SRL
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 87
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
H V+ Y T Q+++ LY
Sbjct: 88 DHPFFVKLY------------------------------------FTFQDDE----KLYF 107
Query: 541 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ Y L + FD+ +IV L ++HG+GIIHRDL P NI +
Sbjct: 108 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 167
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
I+I DFG AK L E A Y +PE+ E+ K
Sbjct: 168 HIQITDFGTAKVLSPESKQARANXFVGTAQ-------------YVSPELLTEKSACK--- 211
Query: 658 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 701
+D+++LG + ++L PF E I +K + + P + K
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 258
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 60/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ 481
L DF+ +PLG G FG+V L + + A+K + + + + V ++ REV S L+
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++R Y +F ++T +Y+
Sbjct: 71 HPNILRLY-GYFH---------------------------------------DATRVYLI 90
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 91 LEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE 150
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+KI DFG + P Y PE+ +G DEK D
Sbjct: 151 LKIADFGWS-----------VHAPSSRRTTLCGTLD------YLPPEMIEGRMH-DEKVD 192
Query: 661 MYSLGIVFFEL 671
++SLG++ +E
Sbjct: 193 LWSLGVLCYEF 203
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 65/283 (22%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQ 483
F +L+ +G G FG V +D R V I++ D ++ + I +E+ LS+
Sbjct: 25 FTKLERIGKGSFGEVF---KGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+V +YY ++ L+ + L+I ME
Sbjct: 82 YVTKYYGSY----------------------------------------LKGSKLWIIME 101
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
Y FD+ + ++I++GL ++H + IHRD+ N+ + D+K+
Sbjct: 102 YLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKL 161
Query: 604 GDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYS 663
DFG+A L Q+ ++ F+ APE+ Q D KAD++S
Sbjct: 162 ADFGVAGQLTDTQIKRNTFVGTP---------------FWMAPEVIQ-QSAYDSKADIWS 205
Query: 664 LGIVFFEL--WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSE 704
LGI EL P ++ M VL + + PP+ V F++
Sbjct: 206 LGITAIELAKGEPPNSDMHPMRVLFLIPKNN--PPTLVGDFTK 246
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 97/248 (39%), Gaps = 67/248 (27%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
LG G FG V KNK G A K I K + + D I+ E+ L+ H ++V+ A
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEE-ELEDYIV-EIEILATCDHPYIVKLLGA 84
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR 550
++ G L+I +E+CP +
Sbjct: 85 YYHDG----------------------------------------KLWIMIEFCPGGAVD 104
Query: 551 QVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL- 608
+ D E + RQ++E L +H + IIHRDL N+ DI++ DFG+
Sbjct: 105 AIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
Query: 609 AKFLK-LEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI----EQGWPKIDEKADMYS 663
AK LK L++ D P ++ APE+ D KAD++S
Sbjct: 165 AKNLKTLQKRDSFIGTP-----------------YWMAPEVVMCETMKDTPYDYKADIWS 207
Query: 664 LGIVFFEL 671
LGI E+
Sbjct: 208 LGITLIEM 215
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 44/260 (16%)
Query: 414 NMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILRE 473
++ P ++ +E+L +G G FG V +++ G+ A+KK+ ++++ LRE
Sbjct: 8 SVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE 67
Query: 474 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
+ L L+H++VV + T AS NR +S
Sbjct: 68 IKILQLLKHENVVNLIEI----------------CRTKASPY--NRCKAS---------- 99
Query: 534 ESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
+Y+ ++C L + + F + + ++ GL +IH I+HRD+ N
Sbjct: 100 ----IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 155
Query: 593 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW 652
+ +K+ DFGLA+ L + Q + +Y PE+ G
Sbjct: 156 VLITRDGVLKLADFGLARAFSLAKNSQPNRY-----------XNRVVTLWYRPPELLLGE 204
Query: 653 PKIDEKADMYSLGIVFFELW 672
D++ G + E+W
Sbjct: 205 RDYGPPIDLWGAGCIMAEMW 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 534 ESTYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
+S Y+Y+ +E C R + F + A H QI+ G+ ++H GI+HRDLT +
Sbjct: 82 DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLS 141
Query: 592 NIFFDARNDIKIGDFGLAKFLKL--EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIE 649
N+ +IKI DFGLA LK+ E+ P Y +PEI
Sbjct: 142 NLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN-----------------YISPEIA 184
Query: 650 QGWPKIDEKADMYSLGIVFFELW---HPFSTAMER----QIVLSD 687
E +D++SLG +F+ L PF T + ++VL+D
Sbjct: 185 TRSAHGLE-SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD 228
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 99/260 (38%), Gaps = 50/260 (19%)
Query: 416 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 475
+LP S +D+E + +G G V A+K+I L +K D +L+E+
Sbjct: 7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL-EKCQTSMDELLKEIQ 65
Query: 476 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 535
+S+ H ++V YY ++ D +W L S S D+
Sbjct: 66 AMSQCHHPNIVSYYTSFVVK-------DELWLVMKLLS------GGSVLDI--------- 103
Query: 536 TYLYIQMEYCPRTLRQVFESYDH----FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
++ + +H D+ + R+++EGL ++H G IHRD+
Sbjct: 104 -------------IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAG 150
Query: 592 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
NI ++I DFG++ FL + APE+ +
Sbjct: 151 NILLGEDGSVQIADFGVSAFLA----------TGGDITRNKVRKTFVGTPCWMAPEVMEQ 200
Query: 652 WPKIDEKADMYSLGIVFFEL 671
D KAD++S GI EL
Sbjct: 201 VRGYDFKADIWSFGITAIEL 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 97/248 (39%), Gaps = 67/248 (27%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
LG G FG V KNK G A K I K + + D I+ E+ L+ H ++V+ A
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEE-ELEDYIV-EIEILATCDHPYIVKLLGA 76
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR 550
++ G L+I +E+CP +
Sbjct: 77 YYHDG----------------------------------------KLWIMIEFCPGGAVD 96
Query: 551 QVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL- 608
+ D E + RQ++E L +H + IIHRDL N+ DI++ DFG+
Sbjct: 97 AIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 156
Query: 609 AKFLK-LEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI----EQGWPKIDEKADMYS 663
AK LK L++ D P ++ APE+ D KAD++S
Sbjct: 157 AKNLKTLQKRDSFIGTP-----------------YWMAPEVVMCETMKDTPYDYKADIWS 199
Query: 664 LGIVFFEL 671
LGI E+
Sbjct: 200 LGITLIEM 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 103/261 (39%), Gaps = 65/261 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVAT 476
+SRY E + +G G +G V ++ G A+K +R+ + + LP++ +REVA
Sbjct: 3 TSRY----EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVAL 56
Query: 477 LSRLQ---HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
L RL+ H +VVR L ++R VT
Sbjct: 57 LRRLEAFEHPNVVR-----------------------LMDVCATSRTDREIKVT------ 87
Query: 534 ESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
+ E+ + LR + E L RQ + GL +H I+HRDL P
Sbjct: 88 ------LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 592 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
NI + +K+ DFGLA+ Q A FP +Y APE+
Sbjct: 142 NILVTSGGTVKLADFGLARIYSY----QMALFP------------VVVTLWYRAPEVLL- 184
Query: 652 WPKIDEKADMYSLGIVFFELW 672
DM+S+G +F E++
Sbjct: 185 QSTYATPVDMWSVGCIFAEMF 205
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 99/260 (38%), Gaps = 50/260 (19%)
Query: 416 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 475
+LP S +D+E + +G G V A+K+I L +K D +L+E+
Sbjct: 2 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL-EKCQTSMDELLKEIQ 60
Query: 476 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 535
+S+ H ++V YY ++ D +W L S S D+
Sbjct: 61 AMSQCHHPNIVSYYTSFVVK-------DELWLVMKLLS------GGSVLDI--------- 98
Query: 536 TYLYIQMEYCPRTLRQVFESYDH----FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
++ + +H D+ + R+++EGL ++H G IHRD+
Sbjct: 99 -------------IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAG 145
Query: 592 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
NI ++I DFG++ FL + APE+ +
Sbjct: 146 NILLGEDGSVQIADFGVSAFLA----------TGGDITRNKVRKTFVGTPCWMAPEVMEQ 195
Query: 652 WPKIDEKADMYSLGIVFFEL 671
D KAD++S GI EL
Sbjct: 196 VRGYDFKADIWSFGITAIEL 215
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 103/260 (39%), Gaps = 44/260 (16%)
Query: 414 NMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILRE 473
++ P ++ +E+L +G G FG V +++ G+ A+KK+ ++++ LRE
Sbjct: 8 SVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE 67
Query: 474 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
+ L L+H++VV + T AS NR S
Sbjct: 68 IKILQLLKHENVVNLIEI----------------CRTKASPY--NRCKGS---------- 99
Query: 534 ESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
+Y+ ++C L + + F + + ++ GL +IH I+HRD+ N
Sbjct: 100 ----IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 155
Query: 593 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW 652
+ +K+ DFGLA+ L + Q + +Y PE+ G
Sbjct: 156 VLITRDGVLKLADFGLARAFSLAKNSQPNRY-----------XNRVVTLWYRPPELLLGE 204
Query: 653 PKIDEKADMYSLGIVFFELW 672
D++ G + E+W
Sbjct: 205 RDYGPPIDLWGAGCIMAEMW 224
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 103/260 (39%), Gaps = 44/260 (16%)
Query: 414 NMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILRE 473
++ P ++ +E+L +G G FG V +++ G+ A+KK+ ++++ LRE
Sbjct: 8 SVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE 67
Query: 474 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
+ L L+H++VV + T AS NR S
Sbjct: 68 IKILQLLKHENVVNLIEI----------------CRTKASPY--NRCKGS---------- 99
Query: 534 ESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
+Y+ ++C L + + F + + ++ GL +IH I+HRD+ N
Sbjct: 100 ----IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 155
Query: 593 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW 652
+ +K+ DFGLA+ L + Q + +Y PE+ G
Sbjct: 156 VLITRDGVLKLADFGLARAFSLAKNSQPNRY-----------XNRVVTLWYRPPELLLGE 204
Query: 653 PKIDEKADMYSLGIVFFELW 672
D++ G + E+W
Sbjct: 205 RDYGPPIDLWGAGCIMAEMW 224
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 53/246 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G L T + DV Y+
Sbjct: 84 I----------------------GLLDVFTPARSLEEFNDV------------YLVTHLM 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 110 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA+ E A +Y APEI ++ D++S+G
Sbjct: 169 FGLARHTDDEMTGYVAT------------------RWYRAPEIMLNAMHYNQTVDIWSVG 210
Query: 666 IVFFEL 671
+ EL
Sbjct: 211 CIMAEL 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 103/260 (39%), Gaps = 44/260 (16%)
Query: 414 NMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILRE 473
++ P ++ +E+L +G G FG V +++ G+ A+KK+ ++++ LRE
Sbjct: 7 SVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE 66
Query: 474 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
+ L L+H++VV + T AS NR S
Sbjct: 67 IKILQLLKHENVVNLIEI----------------CRTKASPY--NRCKGS---------- 98
Query: 534 ESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
+Y+ ++C L + + F + + ++ GL +IH I+HRD+ N
Sbjct: 99 ----IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 154
Query: 593 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW 652
+ +K+ DFGLA+ L + Q + +Y PE+ G
Sbjct: 155 VLITRDGVLKLADFGLARAFSLAKNSQPNRY-----------XNRVVTLWYRPPELLLGE 203
Query: 653 PKIDEKADMYSLGIVFFELW 672
D++ G + E+W
Sbjct: 204 RDYGPPIDLWGAGCIMAEMW 223
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 113
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 114 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 139
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 140 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 199
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 200 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 243
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 244 VWSAGCVLAEL 254
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 103
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 104 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 129
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 130 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 189
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 190 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 233
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 234 VWSAGCVLAEL 244
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 98/256 (38%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 69
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 91
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR +++ + D QI +G+ ++ + IHRDL NI +
Sbjct: 92 KLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 151
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 198
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 199 VASDVWSFGVVLYELF 214
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 111
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 112 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 137
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 138 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 197
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 198 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 241
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 242 VWSAGCVLAEL 252
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 109
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 110 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 135
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 196 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 239
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 240 VWSAGCVLAEL 250
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 69
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 91
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 92 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 151
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 198
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 199 VASDVWSFGVVLYELF 214
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 154
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 155 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 180
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 181 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 240
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 241 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 284
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 285 VWSAGCVLAEL 295
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 65
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 87
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 88 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 147
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 148 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 194
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 195 VASDVWSFGVVLYELF 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 73
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 95
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 96 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 155
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 156 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 202
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 203 VASDVWSFGVVLYELF 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 97
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 119
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 179
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 180 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 226
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 227 VASDVWSFGVVLYELF 242
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 80
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 81 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 106
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 107 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 166
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 167 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 210
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 211 VWSAGCVLAEL 221
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 71
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 93
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 94 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 153
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 154 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 200
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 201 VASDVWSFGVVLYELF 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 70
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 92
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 93 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 152
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 153 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 199
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 200 VASDVWSFGVVLYELF 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 66
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 88
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 148
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L QD F F+ APE K
Sbjct: 149 NENRVKIGDFGLTKVLP-----QDKEF-------FKVKEPGESPIFWYAPE-SLTESKFS 195
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 196 VASDVWSFGVVLYELF 211
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 42/194 (21%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
S+++ ++++ + LG G F V C +K G +A K I K S ++ RE
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
+LQH ++VR + + E D + G G L + S AD +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTG-GELFEDIVAREFYSEADAS----------- 108
Query: 539 YIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 598
H +QI+E +A+ H GI+HR+L P N+ ++
Sbjct: 109 ---------------------------HCIQQILESIAYCHSNGIVHRNLKPENLLLASK 141
Query: 599 ND---IKIGDFGLA 609
+K+ DFGLA
Sbjct: 142 AKGAAVKLADFGLA 155
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 66
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 88
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 148
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 195
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 196 VASDVWSFGVVLYELF 211
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 42/194 (21%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
S+++ ++++ + LG G F V C +K G +A K I K S ++ RE
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
+LQH ++VR + + E D + G G L + S AD +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTG-GELFEDIVAREFYSEADAS----------- 108
Query: 539 YIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 598
H +QI+E +A+ H GI+HR+L P N+ ++
Sbjct: 109 ---------------------------HCIQQILESIAYCHSNGIVHRNLKPENLLLASK 141
Query: 599 ND---IKIGDFGLA 609
+K+ DFGLA
Sbjct: 142 AKGAAVKLADFGLA 155
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 64
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 86
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 87 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 146
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 147 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 193
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 194 VASDVWSFGVVLYELF 209
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 72
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 94
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 95 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 154
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 155 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 201
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 202 VASDVWSFGVVLYELF 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
LQ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 66
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 88
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ MEY P +LR + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 148
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 195
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 196 VASDVWSFGVVLYELF 211
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 61/266 (22%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLP 465
VD G+ N+ S F +L+ +G G FG V +D R V I++ D ++
Sbjct: 11 VDLGTENLYFQSMDPEELFTKLEKIGKGSFGEVF---KGIDNRTQKVVAIKIIDLEEAED 67
Query: 466 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 525
+ I +E+ LS+ +V +YY ++
Sbjct: 68 EIEDIQQEITVLSQCDSPYVTKYYGSY--------------------------------- 94
Query: 526 VTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585
L+ T L+I MEY D+ + R+I++GL ++H + IH
Sbjct: 95 -------LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH 147
Query: 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTA 645
RD+ N+ ++K+ DFG+A L Q+ ++ F+ A
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP---------------FWMA 192
Query: 646 PEIEQGWPKIDEKADMYSLGIVFFEL 671
PE+ + D KAD++SLGI EL
Sbjct: 193 PEVIK-QSAYDSKADIWSLGITAIEL 217
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 88
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 89 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 114
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 115 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 174
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 175 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 218
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 219 VWSAGCVLAEL 229
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 42/204 (20%)
Query: 416 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 475
++ +R+ +++ + LG G F V C L G+ YA I K S + ++ RE
Sbjct: 3 TITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREAR 62
Query: 476 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 535
L+H ++VR + + E G D + G G L + S AD +
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG-GELFEDIVAREYYSEADAS-------- 113
Query: 536 TYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
H +QI+E + H H G++HR+L P N+
Sbjct: 114 ------------------------------HCIQQILEAVLHCHQMGVVHRNLKPENLLL 143
Query: 596 DAR---NDIKIGDFGLAKFLKLEQ 616
++ +K+ DFGLA ++ EQ
Sbjct: 144 ASKLKGAAVKLADFGLAIEVEGEQ 167
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYAPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVK 193
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 109
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 110 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 135
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 196 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 239
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 240 VWSAGCVLAEL 250
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 67/264 (25%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
S + ++ F+ + G G FG V L K K G A+KK+ ++D +R L+ + L+
Sbjct: 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRF--RNRELQIMQDLA 74
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L H ++V+ Q++F T G+ ++ YL
Sbjct: 75 VLHHPNIVQL-QSYFYT-------------------------------LGERDR-RDIYL 101
Query: 539 YIQMEYCPRTLRQVFESYDHFDKELA----------WHLFRQIVEGLAHIHGQGIIHRDL 588
+ MEY P TL + +Y + +++A + L R I G H+ + HRD+
Sbjct: 102 NVVMEYVPDTLHRCCRNY--YRRQVAPPPILIKVFLFQLIRSI--GCLHLPSVNVCHRDI 157
Query: 589 TPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE 647
P+N+ + A +K+ DFG AK KL + + A+ +Y APE
Sbjct: 158 KPHNVLVNEADGTLKLCDFGSAK--KLSPSEPNVAY--------------ICSRYYRAPE 201
Query: 648 IEQGWPKIDEKADMYSLGIVFFEL 671
+ G D++S+G +F E+
Sbjct: 202 LIFGNQHYTTAVDIWSVGCIFAEM 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YXQRTLREIKILLRFRHENI 87
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 88 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 117
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 118 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 172 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 666 IVFFEL 671
+ E+
Sbjct: 220 CILAEM 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 87
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 88 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 117
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 118 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 172 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 666 IVFFEL 671
+ E+
Sbjct: 220 CILAEM 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 75
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 76 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 101
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 162 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 205
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 206 VWSAGCVLAEL 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA-TL 477
++ +L+ FE ++ LG G FG V+L K+K G HYA+K + DK V L+++ TL
Sbjct: 37 NTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVK---LKQIEHTL 90
Query: 478 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+ + Q V + L FS + S+
Sbjct: 91 NEKRIQQAVNF--------------------PFLVKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ +EY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVLEYAPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 173 LLIDQQGYIKVADFGFAKRVK 193
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 81
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 82 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 111
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 112 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 166 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 666 IVFFEL 671
+ E+
Sbjct: 214 CILAEM 219
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 88
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 89 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 118
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 119 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 173 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 666 IVFFEL 671
+ E+
Sbjct: 221 CILAEM 226
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 81
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 82 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 111
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 112 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 166 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 666 IVFFEL 671
+ E+
Sbjct: 214 CILAEM 219
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 89
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 90 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 119
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 120 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 173
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 174 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 221
Query: 666 IVFFEL 671
+ E+
Sbjct: 222 CILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 80
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 81 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 110
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 111 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 164
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 165 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 212
Query: 666 IVFFEL 671
+ E+
Sbjct: 213 CILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 87
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 88 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 117
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 118 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 172 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 666 IVFFEL 671
+ E+
Sbjct: 220 CILAEM 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 23/119 (19%)
Query: 558 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKL 614
HF + A ++ R++V ++H+H G++HRDL P N+ F ND IKI DFG A+
Sbjct: 102 HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL 671
+ +Q P Y APE+ + G+ DE D++SLG++ + +
Sbjct: 162 D--NQPLKTP-------------CFTLHYAAPELLNQNGY---DESCDLWSLGVILYTM 202
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 87
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 88 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 117
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 118 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 172 FGLA---RVADPDHDHT---------GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 666 IVFFEL 671
+ E+
Sbjct: 220 CILAEM 225
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 110/271 (40%), Gaps = 71/271 (26%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVL-C---KNKLDGRHYAVKKIRLKDKSLPV 466
G + ++ RYL ++++ LG G FG V L C N G AVK ++ D
Sbjct: 21 GPGDPTVFHKRYL---KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADAGPQH 76
Query: 467 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 526
+E+ L L H+H+++Y + G A
Sbjct: 77 RSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS--------------------------- 109
Query: 527 TGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGII 584
L + MEY P +LR + +L LF +QI EG+A++H Q I
Sbjct: 110 -----------LQLVMEYVPLGSLRDYLPRHSIGLAQLL--LFAQQICEGMAYLHAQHYI 156
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLAKFL----KLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
HRDL N+ D +KIGDFGLAK + + ++ +D P
Sbjct: 157 HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV--------------- 201
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
F+ APE + + K +D++S G+ +EL
Sbjct: 202 -FWYAPECLKEY-KFYYASDVWSFGVTLYEL 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 88
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 89 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 118
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 119 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 173 FGLA---RVADPDHDHT---------GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 666 IVFFEL 671
+ E+
Sbjct: 221 CILAEM 226
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 57/243 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
LG G FG V L + + G +K I KD+S ++I E+ L L H ++++ ++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTIN-KDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 551
+ + ++ G G L S +A A G Y+
Sbjct: 89 FEDYHNMYIVMETCEG-GELLERIVSAQARGKALSEG----------YVA---------- 127
Query: 552 VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DARNDIKIGDFGL 608
L +Q++ LA+ H Q ++H+DL P NI F + IKI DFGL
Sbjct: 128 --------------ELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL 173
Query: 609 AKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
A+ K ++ +AA Y APE+ + + K D++S G+V
Sbjct: 174 AELFKSDEHSTNAA----------------GTALYMAPEVFKR--DVTFKCDIWSAGVVM 215
Query: 669 FEL 671
+ L
Sbjct: 216 YFL 218
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 87
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 88 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 113
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 114 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 173
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 174 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 217
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 218 VWSAGCVLAEL 228
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 42/193 (21%)
Query: 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 479
+++ ++++ + LG G F V C +K G +A K I K S ++ RE +
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 480 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
LQH ++VR + + E D + G G L + S AD +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTG-GELFEDIVAREFYSEADAS------------ 107
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
H +QI+E +A+ H GI+HR+L P N+ ++
Sbjct: 108 --------------------------HCIQQILESIAYCHSNGIVHRNLKPENLLLASKA 141
Query: 600 D---IKIGDFGLA 609
+K+ DFGLA
Sbjct: 142 KGAAVKLADFGLA 154
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 87
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 88 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 117
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 118 -KLLKCQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 172 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 666 IVFFEL 671
+ E+
Sbjct: 220 CILAEM 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 94
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 95 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 120
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 121 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 180
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 181 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 224
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 225 VWSAGCVLAEL 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 87
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 88 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 113
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 114 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 173
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 174 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 217
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 218 VWSAGCVLAEL 228
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 84 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 109
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 110 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 169
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 170 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 213
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 214 VWSAGCVLAEL 224
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G HYA+K + DK ++V L
Sbjct: 29 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK---ILDK---------QKVVKLK 76
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 77 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 108
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 109 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 164
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 165 LLIDQQGYIQVTDFGFAKRVK 185
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 106/267 (39%), Gaps = 77/267 (28%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND-RILREVATLSRLQHQHVVRYYQ 490
LGHG G +V + D R AVK+I + S + ++LRE +H +V+RY+
Sbjct: 32 LGHGAEGTIVY-RGMFDNRDVAVKRILPECFSFADREVQLLRESD-----EHPNVIRYF- 84
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
T ++ + + YI +E C TL+
Sbjct: 85 -----------------------------------CTEKDRQFQ----YIAIELCAATLQ 105
Query: 551 QVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DARNDIK--I 603
+ E D H E L +Q GLAH+H I+HRDL P+NI +A IK I
Sbjct: 106 EYVEQKDFAHLGLE-PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMI 164
Query: 604 GDFGLAKFLKL--EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDEKA 659
DFGL K L + + + P + APE+ E
Sbjct: 165 SDFGLCKKLAVGRHSFSRRSGVPGTEG--------------WIAPEMLSEDCKENPTYTV 210
Query: 660 DMYSLGIVFF----ELWHPFSTAMERQ 682
D++S G VF+ E HPF +++RQ
Sbjct: 211 DIFSAGCVFYYVISEGSHPFGKSLQRQ 237
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 102/261 (39%), Gaps = 65/261 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVAT 476
+SRY E + +G G +G V ++ G A+K +R+ + + LP++ +REVA
Sbjct: 3 TSRY----EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVAL 56
Query: 477 LSRLQ---HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
L RL+ H +VVR L ++R VT
Sbjct: 57 LRRLEAFEHPNVVR-----------------------LMDVCATSRTDREIKVT------ 87
Query: 534 ESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
+ E+ + LR + E L RQ + GL +H I+HRDL P
Sbjct: 88 ------LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 592 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
NI + +K+ DFGLA+ Q+ D +Y APE+
Sbjct: 142 NILVTSGGTVKLADFGLARIYSY-QMALDPVV---------------VTLWYRAPEVLL- 184
Query: 652 WPKIDEKADMYSLGIVFFELW 672
DM+S+G +F E++
Sbjct: 185 QSTYATPVDMWSVGCIFAEMF 205
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 101/270 (37%), Gaps = 68/270 (25%)
Query: 413 PNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-----LPVN 467
P S+ +SRY E + +G G +G V ++ G A+K +R+ + LP++
Sbjct: 2 PLGSMATSRY----EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 468 DRILREVATLSRLQ---HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 524
+REVA L RL+ H +VVR
Sbjct: 58 --TVREVALLRRLEAFEHPNVVRLM----------------------------------- 80
Query: 525 DVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQG 582
DV + + E+ + LR + E L RQ + GL +H
Sbjct: 81 DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 140
Query: 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYF 642
I+HRDL P NI + +K+ DFGLA+ Q A P +
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIYSY----QMALTP------------VVVTLW 184
Query: 643 YTAPEIEQGWPKIDEKADMYSLGIVFFELW 672
Y APE+ DM+S+G +F E++
Sbjct: 185 YRAPEVLL-QSTYATPVDMWSVGCIFAEMF 213
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVK 193
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 46/256 (17%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ- 481
L +E ++ LG G +G V ++ G AVKKI ++ R RE+ L+ L
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H+++V RA + DV Y+
Sbjct: 68 HENIVNLLNVL--------------------------RADNDRDV------------YLV 89
Query: 542 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
+Y L V + + + ++ Q+++ + ++H G++HRD+ P+NI +A +
Sbjct: 90 FDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHV 148
Query: 602 KIGDFGLAK-FLKLEQLDQDAAFPXXXXXXXX-----XXXXXXXXYFYTAPEIEQGWPKI 655
K+ DFGL++ F+ + ++ + +Y APEI G K
Sbjct: 149 KVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKY 208
Query: 656 DEKADMYSLGIVFFEL 671
+ DM+SLG + E+
Sbjct: 209 TKGIDMWSLGCILGEI 224
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVK 193
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 79/203 (38%), Gaps = 45/203 (22%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
++++ + +G G F V C G YA K I K S + ++ RE L+H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++VR + + E G D + G G L + S AD +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTG-GELFEDIVAREYYSEADAS---------------- 106
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND--- 600
H +QI+E + H H G++HRDL P N+ ++
Sbjct: 107 ----------------------HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAA 144
Query: 601 IKIGDFGLAKFLKLEQLDQDAAF 623
+K+ DFGLA + Q DQ A F
Sbjct: 145 VKLADFGLAIEV---QGDQQAWF 164
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
++H + R QA +F L FS + S+
Sbjct: 84 EIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYAPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFGLAK +K
Sbjct: 172 LMIDQQGYIKVTDFGLAKRVK 192
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 104/266 (39%), Gaps = 61/266 (22%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLP 465
V SG P M + F +L+ +G G FG V +D R V I++ D ++
Sbjct: 6 VQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVF---KGIDNRTQKVVAIKIIDLEEAED 62
Query: 466 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 525
+ I +E+ LS+ +V +YY ++
Sbjct: 63 EIEDIQQEITVLSQCDSPYVTKYYGSY--------------------------------- 89
Query: 526 VTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585
L+ T L+I MEY D+ + R+I++GL ++H + IH
Sbjct: 90 -------LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH 142
Query: 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTA 645
RD+ N+ ++K+ DFG+A L Q+ ++ F+ A
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTP---------------FWMA 187
Query: 646 PEIEQGWPKIDEKADMYSLGIVFFEL 671
PE+ + D KAD++SLGI EL
Sbjct: 188 PEVIKQ-SAYDSKADIWSLGITAIEL 212
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVK 193
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G HYA+K + DK ++V L
Sbjct: 57 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK---ILDK---------QKVVKLK 104
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 105 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 136
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 137 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 192
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 193 LLIDQQGYIQVTDFGFAKRVK 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ G+ ++H + IIHRDL NNIF N +KIGDFGLA ++ Q +Q +
Sbjct: 115 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG-- 172
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ Q ++D+Y+ GIV +EL P+S
Sbjct: 173 ---------------SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 217
Query: 680 ERQIVLSDLKQKGELPP 696
R ++ ++ +G L P
Sbjct: 218 NRDQII-EMVGRGSLSP 233
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 84 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 113
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 114 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 168 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 666 IVFFEL 671
+ E+
Sbjct: 216 CILAEM 221
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAA 622
+ RQ G+ ++H + IIHRDL NNIF N +KIGDFGLA ++ Q +Q +
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELWH---PFST 677
+ APE+ Q ++D+Y+ GIV +EL P+S
Sbjct: 185 -----------------SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227
Query: 678 AMERQIVLSDLKQKGELPP 696
R ++ ++ +G L P
Sbjct: 228 INNRDQII-EMVGRGSLSP 245
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 102/261 (39%), Gaps = 65/261 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVAT 476
+SRY E + +G G +G V ++ G A+K +R+ + + LP++ +REVA
Sbjct: 3 TSRY----EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVAL 56
Query: 477 LSRLQ---HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 533
L RL+ H +VVR L ++R VT
Sbjct: 57 LRRLEAFEHPNVVR-----------------------LMDVCATSRTDREIKVT------ 87
Query: 534 ESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
+ E+ + LR + E L RQ + GL +H I+HRDL P
Sbjct: 88 ------LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 592 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
NI + +K+ DFGLA+ Q A P +Y APE+
Sbjct: 142 NILVTSGGTVKLADFGLARIYSY----QMALAP------------VVVTLWYRAPEVLL- 184
Query: 652 WPKIDEKADMYSLGIVFFELW 672
DM+S+G +F E++
Sbjct: 185 QSTYATPVDMWSVGCIFAEMF 205
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 85
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 86 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 116 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 170 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 666 IVFFEL 671
+ E+
Sbjct: 218 CILAEM 223
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G HYA+K + DK ++V L
Sbjct: 29 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK---ILDK---------QKVVKLK 76
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 77 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 108
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 109 LYMVMEYVPGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 164
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 165 LLIDQQGYIQVTDFGFAKRVK 185
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + L+ A++KI + R LRE+ L R +H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQ-RTLREIKILLRFRHENI 87
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 88 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 117
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 118 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 172 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 666 IVFFEL 671
+ E+
Sbjct: 220 CILAEM 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 108/279 (38%), Gaps = 67/279 (24%)
Query: 426 FEELQPLGHGGFGHVVLCK--NKLDGRHYAVKKIRLKDKSLPVNDRILREVA--TLSRLQ 481
FE L+ LG G FG V L + + D H K+ LK +L V DR+ ++ L+ +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKV-LKKATLKVRDRVRTKMERDILADVN 88
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H VV+ + A+ G D + G R + T ++ K YL
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLF------TRLSKEVMFTEEDVKF---YL--- 136
Query: 542 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
ELA GL H+H GII+RDL P NI D I
Sbjct: 137 -------------------AELAL--------GLDHLHSLGIIYRDLKPENILLDEEGHI 169
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDEKA 659
K+ DFGL+K E +D + Y APE+ QG A
Sbjct: 170 KLTDFGLSK----EAIDHEKK-----------AYSFCGTVEYMAPEVVNRQGH---SHSA 211
Query: 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP 695
D +S G++ FE+ PF ++ + LK K +P
Sbjct: 212 DWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 84 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 113
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 114 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 168 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 666 IVFFEL 671
+ E+
Sbjct: 216 CILAEM 221
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAA 622
+ RQ G+ ++H + IIHRDL NNIF N +KIGDFGLA ++ Q +Q +
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELWH---PFST 677
+ APE+ Q ++D+Y+ GIV +EL P+S
Sbjct: 185 -----------------SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227
Query: 678 AMERQIVLSDLKQKGELPP 696
R ++ ++ +G L P
Sbjct: 228 INNRDQII-EMVGRGSLSP 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 84 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 113
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 114 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 168 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 666 IVFFEL 671
+ E+
Sbjct: 216 CILAEM 221
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 102/271 (37%), Gaps = 76/271 (28%)
Query: 419 SSRYLNDFEE-----LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKS 463
SR FEE LQ LG G FG V +C+ G AVKK++ L+D
Sbjct: 1 GSRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-- 58
Query: 464 LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 523
RE+ L LQH ++V+Y + G +
Sbjct: 59 ------FEREIEILKSLQHDNIVKYKGVCYSAGRRN------------------------ 88
Query: 524 ADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581
L + MEY P +LR + + + D QI +G+ ++ +
Sbjct: 89 --------------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 134
Query: 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXY 641
IHR+L NI + N +KIGDFGL K L QD +
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLP-----QDKEY-------YKVKEPGESPI 182
Query: 642 FYTAPEIEQGWPKIDEKADMYSLGIVFFELW 672
F+ APE K +D++S G+V +EL+
Sbjct: 183 FWYAPE-SLTESKFSVASDVWSFGVVLYELF 212
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 79
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 80 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 105
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 106 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 165
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 166 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 209
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 210 VWSAGCVLAEL 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 103
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 104 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 133
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 134 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 187
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 188 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 666 IVFFEL 671
+ E+
Sbjct: 236 CILAEM 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 91
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 92 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 121
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 122 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 175
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 176 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 223
Query: 666 IVFFEL 671
+ E+
Sbjct: 224 CILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 84 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 113
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 114 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 168 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 666 IVFFEL 671
+ E+
Sbjct: 216 CILAEM 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 83
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D RA + + +YI +
Sbjct: 84 I---------GINDII-----------------RAPTIEQMKD---------VYIVQDLM 108
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L ++ ++ H + + QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 109 ETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXD 167
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 168 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 666 IVFFEL 671
+ E+
Sbjct: 216 CILAEM 221
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 98/256 (38%), Gaps = 71/256 (27%)
Query: 429 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIR------LKDKSLPVNDRILREVATLS 478
L+ LG G FG V +C+ G AVKK++ L+D RE+ L
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--------FEREIEILK 69
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
LQH ++V+Y + G + L
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRN--------------------------------------L 91
Query: 539 YIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
+ ME+ P +LR+ + + + D QI +G+ ++ + IHRDL NI +
Sbjct: 92 KLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 151
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
N +KIGDFGL K L ++ P F+ APE K
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------------FWYAPE-SLTESKFS 198
Query: 657 EKADMYSLGIVFFELW 672
+D++S G+V +EL+
Sbjct: 199 VASDVWSFGVVLYELF 214
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 75
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 76 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 101
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 162 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 205
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 206 VWSAGCVLAEL 216
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 75
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 76 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 101
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 162 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 205
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 206 VWSAGCVLAEL 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 77 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 102
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 103 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 162
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 163 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 206
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 207 VWSAGCVLAEL 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+DK RE+ + +L H ++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN-----RELQIMRKLDHCNI 75
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 76 VRLRYFFYSSG----------------------------------EKKDVVYLNLVLDYV 101
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 162 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 205
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 206 VWSAGCVLAEL 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 102/260 (39%), Gaps = 57/260 (21%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP---VNDRIL 471
M+L +E+L LG G F V ++K + A+KKI+L +S +N L
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 472 REVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 531
RE+ L L H +++ A+ D M + +V ++N
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM---------------ETDLEVIIKDN 105
Query: 532 KLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
L T +I+ A+ L ++GL ++H I+HRDL PN
Sbjct: 106 SLVLTPSHIK----------------------AYMLM--TLQGLEYLHQHWILHRDLKPN 141
Query: 592 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
N+ D +K+ DFGLAK + A+ +Y APE+ G
Sbjct: 142 NLLLDENGVLKLADFGLAKSFG----SPNRAY-----------XHQVVTRWYRAPELLFG 186
Query: 652 WPKIDEKADMYSLGIVFFEL 671
DM+++G + EL
Sbjct: 187 ARMYGVGVDMWAVGCILAEL 206
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLTKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYAPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVK 193
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLTKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYAPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVK 193
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 100/278 (35%), Gaps = 84/278 (30%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQ 490
LG+G G VV + GR AVK++ + D L E+ L+ H +V+RYY
Sbjct: 41 LGYGSSGTVVF-QGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYY- 93
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ + D +LYI +E C L+
Sbjct: 94 -----------------------------CSETTD----------RFLYIALELCNLNLQ 114
Query: 551 QVFESYDHFDKELAWH-------LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---- 599
+ ES + D+ L L RQI G+AH+H IIHRDL P NI +
Sbjct: 115 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTA 174
Query: 600 ---------DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI-- 648
I I DFGL K L Q + APE+
Sbjct: 175 DQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG-----------WRAPELLE 223
Query: 649 EQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
E ++ D++S+G VF+ + HPF R+
Sbjct: 224 ESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+ K+ RE+ + +L H ++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKN-----RELQIMRKLDHCNI 75
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 76 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 101
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 162 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 205
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 206 VWSAGCVLAEL 216
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYAPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 172 LMIDQQGYIKVTDFGFAKRVK 192
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+ K+ RE+ + +L H ++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKN-----RELQIMRKLDHCNI 75
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 76 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 101
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK +L + + + ++ +Y APE+ G D
Sbjct: 162 LKLCDFGSAK--QLVRGEPNVSY--------------ICSRYYRAPELIFGATDYTSSID 205
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 206 VWSAGCVLAEL 216
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 115/278 (41%), Gaps = 73/278 (26%)
Query: 416 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILR-EV 474
S+ ++ F ++ LG G F V L K +L G+ +A+K I+ KS D L E+
Sbjct: 1 SMQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK---KSPAFRDSSLENEI 57
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
A L +++H+++V TL E+ E
Sbjct: 58 AVLKKIKHENIV-----------------------TL------------------EDIYE 76
Query: 535 ST---YLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
ST YL +Q+ ++ E + +K+ A + +Q++ + ++H GI+HRDL P
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYTEKD-ASLVIQQVLSAVKYLHENGIVHRDLKPE 135
Query: 592 NIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
N+ + + + I I DFGL+K + + P Y APE+
Sbjct: 136 NLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPG-----------------YVAPEV 178
Query: 649 EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQI 683
P + D +S+G++ + L + PF E ++
Sbjct: 179 LAQKP-YSKAVDCWSIGVITYILLCGYPPFYEETESKL 215
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 126/306 (41%), Gaps = 73/306 (23%)
Query: 380 SSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSR--YLNDFEELQP-LGHGG 436
SS + ++ Q M S V+ P S P+ + S L+DF E++ LG G
Sbjct: 8 SSGVDLGTENLYFQSM--SSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGA 65
Query: 437 FGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILR-EVATLSRLQHQHVVRYYQAWFET 495
V CK K + YA+K ++ V+ +I+R E+ L RL H ++++ + FET
Sbjct: 66 TSIVYRCKQKGTQKPYALKVLKKT-----VDKKIVRTEIGVLLRLSHPNIIKLKEI-FET 119
Query: 496 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES 555
+ + VTG E ++ E
Sbjct: 120 P--------------------TEISLVLELVTGGE-----------------LFDRIVEK 142
Query: 556 YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFL 612
++ + A +QI+E +A++H GI+HRDL P N+ + +KI DFGL+K +
Sbjct: 143 -GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201
Query: 613 KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL- 671
+ + L + Y APEI +G E DM+S+GI+ + L
Sbjct: 202 EHQVLMKTVCGTPG----------------YCAPEILRGCAYGPE-VDMWSVGIITYILL 244
Query: 672 --WHPF 675
+ PF
Sbjct: 245 CGFEPF 250
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ +G G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 172 LLIDQQGYIKVADFGFAKRVK 192
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLTKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYAPGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVK 193
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 100/278 (35%), Gaps = 84/278 (30%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQ 490
LG+G G VV + GR AVK++ + D L E+ L+ H +V+RYY
Sbjct: 41 LGYGSSGTVVF-QGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYY- 93
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ + D +LYI +E C L+
Sbjct: 94 -----------------------------CSETTD----------RFLYIALELCNLNLQ 114
Query: 551 QVFESYDHFDKELAWH-------LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---- 599
+ ES + D+ L L RQI G+AH+H IIHRDL P NI +
Sbjct: 115 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTA 174
Query: 600 ---------DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI-- 648
I I DFGL K L Q + APE+
Sbjct: 175 DQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG-----------WRAPELLE 223
Query: 649 EQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
E ++ D++S+G VF+ + HPF R+
Sbjct: 224 ESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYAPGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 172 LMIDQQGYIKVTDFGFAKRVK 192
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ +G G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYMPGGDMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 172 LLIDQQGYIKVADFGFAKRVK 192
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
++H + R QA +F L FS + S+
Sbjct: 84 EIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYAPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFGLAK +K
Sbjct: 172 LMIDQQGYIQVTDFGLAKRVK 192
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 71/254 (27%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR---ILREVATLSRLQH 482
F +L+ +GHG FG V ++ + A+KK+ K N++ I++EV L +L+H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQKLRH 113
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+ ++Y + A ++ M
Sbjct: 114 PNTIQYRGCYLREHTA----------------------------------------WLVM 133
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQ-IVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
EYC + + E + +E+ ++GLA++H +IHRD+ NI +
Sbjct: 134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV 193
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI----EQGWPKIDE 657
K+GDFG A + + P ++ APE+ ++G + D
Sbjct: 194 KLGDFGSASIMA--PANXFVGTP-----------------YWMAPEVILAMDEG--QYDG 232
Query: 658 KADMYSLGIVFFEL 671
K D++SLGI EL
Sbjct: 233 KVDVWSLGITCIEL 246
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ +G G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYMPGGDMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + IK+ DFG AK +K
Sbjct: 172 LLIDQQGYIKVADFGFAKRVK 192
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 93/252 (36%), Gaps = 57/252 (22%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATL 477
S R++ + + LG G FG V L + + A+K I R K ++ R+ RE++ L
Sbjct: 4 SKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL 63
Query: 478 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
L+H H+++ Y + D+
Sbjct: 64 KLLRHPHIIKLYDV----------------------------ITTPTDIV---------- 85
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
+ +EY L ++ F+QI+ + + H I+HRDL P N+ D
Sbjct: 86 --MVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD 143
Query: 598 RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE 657
++KI DFGL+ + D F Y APE+ G
Sbjct: 144 NLNVKIADFGLSNIM------TDGNFLKTSCGSPN----------YAAPEVINGKLYAGP 187
Query: 658 KADMYSLGIVFF 669
+ D++S GIV +
Sbjct: 188 EVDVWSCGIVLY 199
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 104/282 (36%), Gaps = 88/282 (31%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQ 490
LG+G G VV + GR AVK++ + D L E+ L+ H +V+RYY
Sbjct: 23 LGYGSSGTVVF-QGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYY- 75
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
S ++R +LYI +E C L+
Sbjct: 76 ----------------------CSETTDR-----------------FLYIALELCNLNLQ 96
Query: 551 QVFESYDHFDKELAWH-------LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---- 599
+ ES + D+ L L RQI G+AH+H IIHRDL P NI +
Sbjct: 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTA 156
Query: 600 ---------DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI-- 648
I I DFGL K L Q ++F + APE+
Sbjct: 157 DQQTGAENLRILISDFGLCKKLDSGQ----SSFRTNLNNPSGTSG-------WRAPELLE 205
Query: 649 ----EQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
Q ++ D++S+G VF+ + HPF R+
Sbjct: 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 28/167 (16%)
Query: 537 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
++Y+ +E C R +L ++ + + A + RQ ++G+ ++H +IHRDL N+F
Sbjct: 116 FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 175
Query: 596 DARNDIKIGDFGLAKFLKL--EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQG 651
+ D+KIGDFGLA ++ E+ P Y APE+ ++G
Sbjct: 176 NDDMDVKIGDFGLATKIEFDGERKKTLCGTPN-----------------YIAPEVLCKKG 218
Query: 652 WPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP 695
+ D++SLG + + L PF T+ ++ + K + +P
Sbjct: 219 H---SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP 262
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 44/241 (18%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKK-IRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 490
LG G FG + ++ G +K+ IR +++ L+EV + L+H +V+++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEET---QRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
++ +F + + G GTL G ++S Y P + R
Sbjct: 75 VLYKDKRLNFITEYIKG-GTL---------------RGIIKSMDSQY--------PWSQR 110
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
F + I G+A++H IIHRDL +N ++ + DFGLA+
Sbjct: 111 VSFA--------------KDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLAR 156
Query: 611 FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 670
L +++ Q ++ APE+ G DEK D++S GIV E
Sbjct: 157 -LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR-SYDEKVDVFSFGIVLCE 214
Query: 671 L 671
+
Sbjct: 215 I 215
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 28/167 (16%)
Query: 537 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
++Y+ +E C R +L ++ + + A + RQ ++G+ ++H +IHRDL N+F
Sbjct: 116 FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 175
Query: 596 DARNDIKIGDFGLAKFLKL--EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQG 651
+ D+KIGDFGLA ++ E+ P Y APE+ ++G
Sbjct: 176 NDDMDVKIGDFGLATKIEFDGERKKXLCGTPN-----------------YIAPEVLCKKG 218
Query: 652 WPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP 695
+ D++SLG + + L PF T+ ++ + K + +P
Sbjct: 219 H---SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP 262
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 28/167 (16%)
Query: 537 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
++Y+ +E C R +L ++ + + A + RQ ++G+ ++H +IHRDL N+F
Sbjct: 116 FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 175
Query: 596 DARNDIKIGDFGLAKFLKL--EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQG 651
+ D+KIGDFGLA ++ E+ P Y APE+ ++G
Sbjct: 176 NDDMDVKIGDFGLATKIEFDGERKKDLCGTPN-----------------YIAPEVLCKKG 218
Query: 652 WPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP 695
+ D++SLG + + L PF T+ ++ + K + +P
Sbjct: 219 H---SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP 262
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 101/271 (37%), Gaps = 67/271 (24%)
Query: 411 GSPNMSL---PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 467
G +MS+ PS+ ++ + + LG G +G V + + A+K+IRL+ + V
Sbjct: 18 GPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVP 77
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+REV+ L LQH++++ L S N
Sbjct: 78 GTAIREVSLLKELQHRNIIE-----------------------LKSVIHHNHR------- 107
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L++ EY L++ + + Q++ G+ H + +HRD
Sbjct: 108 ----------LHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRD 157
Query: 588 LTPNNIFFDARND-----IKIGDFGLAKF--LKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
L P N+ + +KIGDFGLA+ + + Q +
Sbjct: 158 LKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-----------------T 200
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+Y PEI G D++S+ ++ E+
Sbjct: 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 48/200 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G H+A+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
+++H TL V + + +++ L
Sbjct: 84 QIEH---------------------------TLNEKRILQAVNFPFLVKLEYSFKDNSNL 116
Query: 539 YIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
Y+ MEY P LR++ F + A QIV ++H +I+RDL P N+
Sbjct: 117 YMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 594 FFDARNDIKIGDFGLAKFLK 613
D + I++ DFG AK +K
Sbjct: 173 LIDQQGYIQVTDFGFAKRVK 192
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 48/200 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G H+A+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
+++H TL V + + +++ L
Sbjct: 84 QIEH---------------------------TLNEKRILQAVNFPFLVKLEYSFKDNSNL 116
Query: 539 YIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
Y+ MEY P LR++ F + A QIV ++H +I+RDL P N+
Sbjct: 117 YMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 594 FFDARNDIKIGDFGLAKFLK 613
D + I++ DFG AK +K
Sbjct: 173 LIDQQGYIQVTDFGFAKRVK 192
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 31/202 (15%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRL--KDKSLPVN----DRILREVATLSRLQHQHV 485
+G G +G V + ++ + A++ I++ K+K +N +RI EV + +L H ++
Sbjct: 34 IGQGSYGVV---RVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLAS-STFSNRAASSADVTGQENKLESTYLYIQMEY 544
R Y+ + + + G L + F + D TG K + Q+
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFID------DSTG---KCAMDVVKTQICP 141
Query: 545 CPRTLRQVF--------ESYDHFDKE-LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
CP + ES D +E L ++ RQI L ++H QGI HRD+ P N F
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 596 DARN--DIKIGDFGLAK-FLKL 614
+IK+ DFGL+K F KL
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKL 223
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 28/167 (16%)
Query: 537 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
++Y+ +E C R +L ++ + + A + RQ ++G+ ++H +IHRDL N+F
Sbjct: 100 FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 159
Query: 596 DARNDIKIGDFGLAKFLKL--EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQG 651
+ D+KIGDFGLA ++ E+ P Y APE+ ++G
Sbjct: 160 NDDMDVKIGDFGLATKIEFDGERKKDLCGTPN-----------------YIAPEVLCKKG 202
Query: 652 WPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP 695
+ D++SLG + + L PF T+ ++ + K + +P
Sbjct: 203 H---SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP 246
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 48/200 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+K G H+A+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
+++H TL V + + +++ L
Sbjct: 84 QIEH---------------------------TLNEKRILQAVNFPFLVKLEYSFKDNSNL 116
Query: 539 YIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
Y+ MEY P LR++ F + A QIV ++H +I+RDL P N+
Sbjct: 117 YMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 594 FFDARNDIKIGDFGLAKFLK 613
D + I++ DFG AK +K
Sbjct: 173 LIDQQGYIQVTDFGFAKRVK 192
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKILLRFRHENI 103
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T +++ YL +
Sbjct: 104 I---------GINDI----------IRAPTIE--------------QMKDVYLVTHL--M 128
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
L ++ ++ H + + QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 129 GADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 187
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 188 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 666 IVFFEL 671
+ E+
Sbjct: 236 CILAEM 241
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVK 193
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 71/254 (27%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR---ILREVATLSRLQH 482
F +L+ +GHG FG V ++ + A+KK+ K N++ I++EV L +L+H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQKLRH 74
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+ ++Y + A ++ M
Sbjct: 75 PNTIQYRGCYLREHTA----------------------------------------WLVM 94
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQ-IVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
EYC + + E + +E+ ++GLA++H +IHRD+ NI +
Sbjct: 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV 154
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI----EQGWPKIDE 657
K+GDFG A + + P ++ APE+ ++G + D
Sbjct: 155 KLGDFGSASIMA--PANXFVGTP-----------------YWMAPEVILAMDEG--QYDG 193
Query: 658 KADMYSLGIVFFEL 671
K D++SLGI EL
Sbjct: 194 KVDVWSLGITCIEL 207
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 69/271 (25%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVL-C---KNKLDGRHYAVKKIRLKDKSLPV 466
GSP S P+ + ++++ LG G FG V L C N G AVK ++ D
Sbjct: 2 GSP-ASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCGPQH 59
Query: 467 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 526
+E+ L L H+H+++Y G + G+
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKY------KGCCEDQGEKS--------------------- 92
Query: 527 TGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGII 584
L + MEY P +LR + +L LF +QI EG+A++H Q I
Sbjct: 93 -----------LQLVMEYVPLGSLRDYLPRHSIGLAQLL--LFAQQICEGMAYLHAQHYI 139
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLAKFL----KLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
HR+L N+ D +KIGDFGLAK + + ++ +D P
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--------------- 184
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
F+ APE + + K +D++S G+ +EL
Sbjct: 185 -FWYAPECLKEY-KFYYASDVWSFGVTLYEL 213
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 22 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 69
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 70 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 101
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 102 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 157
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 158 LLIDQQGYIQVTDFGFAKRVK 178
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L +H+++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENI 85
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 86 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + +D+KI D
Sbjct: 116 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICD 169
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 170 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 666 IVFFEL 671
+ E+
Sbjct: 218 CILAEM 223
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVK 192
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVK 192
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVK 193
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVK 192
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 98/248 (39%), Gaps = 61/248 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQ 483
F +L+ +G G FG V +D R V I++ D ++ + I +E+ LS+
Sbjct: 9 FTKLEKIGKGSFGEVF---KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+V +YY ++ L+ T L+I ME
Sbjct: 66 YVTKYYGSY----------------------------------------LKDTKLWIIME 85
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
Y D+ + R+I++GL ++H + IHRD+ N+ ++K+
Sbjct: 86 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKL 145
Query: 604 GDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYS 663
DFG+A L Q+ ++ F+ APE+ + D KAD++S
Sbjct: 146 ADFGVAGQLTDTQIKRNTFVGTP---------------FWMAPEVIKQ-SAYDSKADIWS 189
Query: 664 LGIVFFEL 671
LGI EL
Sbjct: 190 LGITAIEL 197
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYAPGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 172 LMIDQQGYIQVTDFGFAKRVK 192
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 69/271 (25%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVL-C---KNKLDGRHYAVKKIRLKDKSLPV 466
GSP S P+ + ++++ LG G FG V L C N G AVK ++ D
Sbjct: 2 GSP-ASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCGPQH 59
Query: 467 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 526
+E+ L L H+H+++Y G + G+
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKY------KGCCEDQGEKS--------------------- 92
Query: 527 TGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGII 584
L + MEY P +LR + +L LF +QI EG+A++H Q I
Sbjct: 93 -----------LQLVMEYVPLGSLRDYLPRHSIGLAQLL--LFAQQICEGMAYLHSQHYI 139
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLAKFL----KLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
HR+L N+ D +KIGDFGLAK + + ++ +D P
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--------------- 184
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
F+ APE + + K +D++S G+ +EL
Sbjct: 185 -FWYAPECLKEY-KFYYASDVWSFGVTLYEL 213
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 107/277 (38%), Gaps = 56/277 (20%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DF L+ +G G FG V+L ++K + YAVK +L++ A L + + +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVK--------------VLQKKAILKKKEEK 83
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
H++ + F L FS + A + ++Q E
Sbjct: 84 HIMSERNVLLKNVKHPF----------LVGLHFSFQTADKLYFVLDYINGGELFYHLQRE 133
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
C R F + +I L ++H I++RDL P NI D++ I +
Sbjct: 134 RCFLEPRARFYA-------------AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVL 180
Query: 604 GDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYS 663
DFGL K E ++ ++ Y APE+ P D D +
Sbjct: 181 TDFGLCK----ENIEHNSTTSTFCGTPE-----------YLAPEVLHKQP-YDRTVDWWC 224
Query: 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS 697
LG V +E+ + PF + ++ + L + +L P+
Sbjct: 225 LGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN 261
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 97/251 (38%), Gaps = 61/251 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + + +G+G FG V K G A+KK+ L+ K+ RE+ + +L H ++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKN-----RELQIMRKLDHCNI 75
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
VR ++ +G K + YL + ++Y
Sbjct: 76 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 101
Query: 546 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 102 PATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 602 -KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
K+ DFG AK L + + +Y APE+ G D
Sbjct: 162 LKLCDFGSAKQLVRGEPN----------------VSXICSRYYRAPELIFGATDYTSSID 205
Query: 661 MYSLGIVFFEL 671
++S G V EL
Sbjct: 206 VWSAGCVLAEL 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 96/247 (38%), Gaps = 62/247 (25%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
+G+G FG VV ++ A+KK+ L+DK RE+ + ++H +VV
Sbjct: 48 IGNGSFG-VVFQAKLVESDEVAIKKV-LQDKRFKN-----RELQIMRIVKHPNVVDLKAF 100
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 551
++ G +K + +L + +EY P T+ +
Sbjct: 101 FYSNG----------------------------------DKKDEVFLNLVLEYVPETVYR 126
Query: 552 VFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI-KIGDF 606
Y + + L + Q++ LA+IH GI HRD+ P N+ D + + K+ DF
Sbjct: 127 ASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF 186
Query: 607 GLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGI 666
G AK L A P +Y APE+ G D++S G
Sbjct: 187 GSAKILI-------AGEPNVSXICSR---------YYRAPELIFGATNYTTNIDIWSTGC 230
Query: 667 VFFELWH 673
V EL
Sbjct: 231 VMAELMQ 237
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 108/281 (38%), Gaps = 67/281 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCK--NKLDGRHYAVKKIRLKDKSLPVNDRILREVA--TLSR 479
+ FE L+ LG G FG V L K + D R K+ LK +L V DR+ ++ L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV-LKKATLKVRDRVRTKMERDILVE 82
Query: 480 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
+ H +V+ + A+ G D + G R + T ++ K YL
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF------TRLSKEVMFTEEDVKF---YL- 132
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
ELA L H+H GII+RDL P NI D
Sbjct: 133 ---------------------AELAL--------ALDHLHSLGIIYRDLKPENILLDEEG 163
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
IK+ DFGL+K E +D + Y APE+ +G +
Sbjct: 164 HIKLTDFGLSK----ESIDHEKK-----------AYSFCGTVEYMAPEVVNRRGH---TQ 205
Query: 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP 695
AD +S G++ FE+ PF ++ + LK K +P
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 62/255 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLK--DKSLPVNDRILREVATLSRLQ- 481
+E + +G G +G V ++ K GR A+K++R++ ++ +P++ +REVA L L+
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLS--TIREVAVLRHLET 70
Query: 482 --HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
H +VVR + + T +E KL + +
Sbjct: 71 FEHPNVVRLFDV------------------------------CTVSRTDRETKLTLVFEH 100
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ + L +V E E + Q++ GL +H ++HRDL P NI +
Sbjct: 101 VDQDLT-TYLDKVPEP--GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 157
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
IK+ DFGLA+ + +Y APE+ + +
Sbjct: 158 QIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQSSYAT--- 198
Query: 658 KADMYSLGIVFFELW 672
D++S+G +F E++
Sbjct: 199 PVDLWSVGCIFAEMF 213
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVK 192
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 108/281 (38%), Gaps = 67/281 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCK--NKLDGRHYAVKKIRLKDKSLPVNDRILREVA--TLSR 479
+ FE L+ LG G FG V L K + D R K+ LK +L V DR+ ++ L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV-LKKATLKVRDRVRTKMERDILVE 83
Query: 480 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
+ H +V+ + A+ G D + G R + T ++ K YL
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF------TRLSKEVMFTEEDVKF---YL- 133
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
ELA L H+H GII+RDL P NI D
Sbjct: 134 ---------------------AELAL--------ALDHLHSLGIIYRDLKPENILLDEEG 164
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
IK+ DFGL+K E +D + Y APE+ +G +
Sbjct: 165 HIKLTDFGLSK----ESIDHEKK-----------AYSFCGTVEYMAPEVVNRRGH---TQ 206
Query: 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP 695
AD +S G++ FE+ PF ++ + LK K +P
Sbjct: 207 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 84
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 85 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 116
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVK 193
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 108/281 (38%), Gaps = 67/281 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCK--NKLDGRHYAVKKIRLKDKSLPVNDRILREVA--TLSR 479
+ FE L+ LG G FG V L K + D R K+ LK +L V DR+ ++ L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV-LKKATLKVRDRVRTKMERDILVE 82
Query: 480 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
+ H +V+ + A+ G D + G R + T ++ K YL
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF------TRLSKEVMFTEEDVKF---YL- 132
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
ELA L H+H GII+RDL P NI D
Sbjct: 133 ---------------------AELAL--------ALDHLHSLGIIYRDLKPENILLDEEG 163
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
IK+ DFGL+K E +D + Y APE+ +G +
Sbjct: 164 HIKLTDFGLSK----ESIDHEKK-----------AYSFCGTVEYMAPEVVNRRGH---TQ 205
Query: 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP 695
AD +S G++ FE+ PF ++ + LK K +P
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY P LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVK 192
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 98/248 (39%), Gaps = 61/248 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQ 483
F +L+ +G G FG V +D R V I++ D ++ + I +E+ LS+
Sbjct: 9 FTKLEKIGKGSFGEVF---KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+V +YY ++ L+ T L+I ME
Sbjct: 66 YVTKYYGSY----------------------------------------LKDTKLWIIME 85
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
Y D+ + R+I++GL ++H + IHRD+ N+ ++K+
Sbjct: 86 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKL 145
Query: 604 GDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYS 663
DFG+A L Q+ ++ F+ APE+ + D KAD++S
Sbjct: 146 ADFGVAGQLTDTQIKRNXFVGTP---------------FWMAPEVIKQ-SAYDSKADIWS 189
Query: 664 LGIVFFEL 671
LGI EL
Sbjct: 190 LGITAIEL 197
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 117/301 (38%), Gaps = 61/301 (20%)
Query: 405 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 464
+P ++ P++ + + DFE + LG G FG V L + K + +A+K ++
Sbjct: 1 EPELNKERPSLQIKLK--IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALK------ 52
Query: 465 PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 524
D +L + + + V+ AW + T TF +
Sbjct: 53 --KDVVLMDDDVECTMVEKRVLSL--AWEHPFL------------THMFCTFQTK----- 91
Query: 525 DVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583
EN L+ MEY L +S FD A +I+ GL +H +GI
Sbjct: 92 -----EN------LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 140
Query: 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFY 643
++RDL +NI D IKI DFG+ K E + DA Y
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNEFCGTPD-----------Y 185
Query: 644 TAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVA 700
APEI G K + D +S G++ +E+ PF E ++ S ++ P W+
Sbjct: 186 IAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS-IRMDNPFYPRWLE 243
Query: 701 K 701
K
Sbjct: 244 K 244
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 49/246 (19%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ L +G G +G V + ++ A+KKI + R LRE+ L +H+++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENI 85
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ G+ D + + T DV ++ +E T LY
Sbjct: 86 I---------GINDI----------IRAPTIE----QMKDVYIVQDLME-TDLY------ 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ L+ S DH + + L+ QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 116 -KLLKTQHLSNDH----ICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
FGLA ++ D D +Y APEI + D++S+G
Sbjct: 170 FGLA---RVADPDHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 666 IVFFEL 671
+ E+
Sbjct: 218 CILAEM 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 41/190 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL-KDKSLP--VNDRILREVATLSRLQH 482
+E + +G G F V C N+ G+ +AVK + + K S P + + RE + L+H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H+V + + G+ + M G+
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGA---------------------------------- 111
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 600
+ C +++ + + + +A H RQI+E L + H IIHRD+ P N+ ++ +
Sbjct: 112 DLCFEIVKRADAGFV-YSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSA 170
Query: 601 -IKIGDFGLA 609
+K+GDFG+A
Sbjct: 171 PVKLGDFGVA 180
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 62/255 (24%)
Query: 426 FEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLK--DKSLPVNDRILREVATLSRLQ- 481
+E + +G G +G V ++ K GR A+K++R++ ++ +P++ +REVA L L+
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLS--TIREVAVLRHLET 70
Query: 482 --HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
H +VVR + + T +E KL + +
Sbjct: 71 FEHPNVVRLFDV------------------------------CTVSRTDRETKLTLVFEH 100
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ + L +V E E + Q++ GL +H ++HRDL P NI +
Sbjct: 101 VDQDLTT-YLDKVPEP--GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 157
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKIDE 657
IK+ DFGLA+ + +Y APE+ + +
Sbjct: 158 QIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQSSYAT--- 198
Query: 658 KADMYSLGIVFFELW 672
D++S+G +F E++
Sbjct: 199 PVDLWSVGCIFAEMF 213
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 76/190 (40%), Gaps = 42/190 (22%)
Query: 432 LGHGGFGHVVL--CKN---KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 486
LG G FG V L C N D AVK LKD +L RE L+ LQH+H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKA--LKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 487 RYYQAWFETGVADFDGDSM------WGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
++Y GV DGD + G L ++ + V GQ + +
Sbjct: 81 KFY------GVCG-DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
QM H+ QI G+ ++ Q +HRDL N A
Sbjct: 134 QM----------------------LHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL 171
Query: 601 IKIGDFGLAK 610
+KIGDFG+++
Sbjct: 172 VKIGDFGMSR 181
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 68/251 (27%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
F+ L+ LG G +G V +K G+ A+K++ ++ I++E++ + + HV
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL----QEIIKEISIMQQCDSPHV 86
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
V+YY ++F ++T L+I MEYC
Sbjct: 87 VKYYGSYF----------------------------------------KNTDLWIVMEYC 106
Query: 546 -PRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
++ + + + E+A + + ++GL ++H IHRD+ NI + K
Sbjct: 107 GAGSVSDIIRLRNKTLTEDEIA-TILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAK 165
Query: 603 IGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQ--GWPKIDEKAD 660
+ DFG+A L ++ F+ APE+ Q G+ + AD
Sbjct: 166 LADFGVAGQLTDXMAKRNXVIGTP---------------FWMAPEVIQEIGYNCV---AD 207
Query: 661 MYSLGIVFFEL 671
++SLGI E+
Sbjct: 208 IWSLGITAIEM 218
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 59/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ ++ + LG G FG V + G ++A K + +S + + +E+ T+S L+H
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRH 213
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+V + A FE +N++ Y ++
Sbjct: 214 PTLVNLHDA-FE----------------------------------DDNEMVMIYEFMS- 237
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR--ND 600
+V + ++ ++ A RQ+ +GL H+H +H DL P NI F + N+
Sbjct: 238 --GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE 295
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+K+ DFGL L +Q + APE+ +G P + D
Sbjct: 296 LKLIDFGLTAHLDPKQ----------------SVKVTTGTAEFAAPEVAEGKP-VGYYTD 338
Query: 661 MYSLGIVFFEL 671
M+S+G++ + L
Sbjct: 339 MWSVGVLSYIL 349
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 101/282 (35%), Gaps = 88/282 (31%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQ 490
LG+G G VV + GR AVK++ + D L E+ L+ H +V+RYY
Sbjct: 23 LGYGSSGTVVF-QGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYY- 75
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
S ++R +LYI +E C L+
Sbjct: 76 ----------------------CSETTDR-----------------FLYIALELCNLNLQ 96
Query: 551 QVFESYDHFDKELAWH-------LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---- 599
+ ES + D+ L L RQI G+AH+H IIHRDL P NI +
Sbjct: 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTA 156
Query: 600 ---------DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI-- 648
I I DFGL K L Q + APE+
Sbjct: 157 DQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG-----------WRAPELLE 205
Query: 649 ----EQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
Q ++ D++S+G VF+ + HPF R+
Sbjct: 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 102/253 (40%), Gaps = 58/253 (22%)
Query: 426 FEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLK--DKSLPVNDRILREVATLSRLQ- 481
+E + +G G +G V ++ K GR A+K++R++ ++ +P++ +REVA L L+
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLS--TIREVAVLRHLET 70
Query: 482 --HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
H +VVR + + T +E KL + +
Sbjct: 71 FEHPNVVRLFDV------------------------------CTVSRTDRETKLTLVFEH 100
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
+ + L +V E E + Q++ GL +H ++HRDL P NI +
Sbjct: 101 VDQDLTT-YLDKVPEP--GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 157
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
IK+ DFGLA+ + +Y APE+
Sbjct: 158 QIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLL-QSSYATPV 200
Query: 660 DMYSLGIVFFELW 672
D++S+G +F E++
Sbjct: 201 DLWSVGCIFAEMF 213
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 59/249 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE + LG G G V +++ G A K I L+ K + ++I+RE+ L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPA-IRNQIIRELQVLHECNSP 74
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 99
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +E+ + ++ GLA++ + I+HRD+ P+NI ++R +IK
Sbjct: 100 ----SLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIK 155
Query: 603 IGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMY 662
+ DFG++ L +D A Y APE QG ++D++
Sbjct: 156 LCDFGVSGQL----IDSMA-------------NSFVGTRSYMAPERLQGT-HYSVQSDIW 197
Query: 663 SLGIVFFEL 671
S+G+ EL
Sbjct: 198 SMGLSLVEL 206
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLHECNSP 126
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 151
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 152 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 207
Query: 603 IGDFGLA 609
+ DFG++
Sbjct: 208 LCDFGVS 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 59/251 (23%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ ++ + LG G FG V + G ++A K + +S + + +E+ T+S L+H
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRH 107
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+V + A FE +N++ Y ++
Sbjct: 108 PTLVNLHDA-FE----------------------------------DDNEMVMIYEFMS- 131
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR--ND 600
+V + ++ ++ A RQ+ +GL H+H +H DL P NI F + N+
Sbjct: 132 --GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE 189
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+K+ DFGL L +Q + APE+ +G P + D
Sbjct: 190 LKLIDFGLTAHLDPKQ----------------SVKVTTGTAEFAAPEVAEGKP-VGYYTD 232
Query: 661 MYSLGIVFFEL 671
M+S+G++ + L
Sbjct: 233 MWSVGVLSYIL 243
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 73/263 (27%)
Query: 420 SRYLNDFEELQPLGHGGFGHVVL-C---KNKLDGRHYAVKKIRLKDKSLP-VNDRILREV 474
RYL ++++ LG G FG V L C N G AVK LK+ P + RE+
Sbjct: 8 KRYL---KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA--LKEGCGPQLRSGWQREI 62
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L L H+H+V+Y G + G+
Sbjct: 63 EILRTLYHEHIVKY------KGCCEDQGEKS----------------------------- 87
Query: 535 STYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNN 592
+ + MEY P +LR + +L LF +QI EG+A++H Q IHR L N
Sbjct: 88 ---VQLVMEYVPLGSLRDYLPRHCVGLAQLL--LFAQQICEGMAYLHAQHYIHRALAARN 142
Query: 593 IFFDARNDIKIGDFGLAKFL----KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
+ D +KIGDFGLAK + + ++ +D P F+ APE
Sbjct: 143 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV----------------FWYAPEC 186
Query: 649 EQGWPKIDEKADMYSLGIVFFEL 671
+ K +D++S G+ +EL
Sbjct: 187 LKEC-KFYYASDVWSFGVTLYEL 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXX 628
RQ +G+ ++H + IIHRD+ NNIF +KIGDFGLA Q P
Sbjct: 139 RQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 629 XXXXXXXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL 671
+ APE+ Q ++D+YS GIV +EL
Sbjct: 199 -------------LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYEL 230
>pdb|2EBM|A Chain A, Solution Structure Of The Rwd Domain Of Human Rwd Domain
Containing Protein 1
Length = 128
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 24 SSSTVDDNELLSEEITALCAIFQEDCKVVSGSPPQILVKLRPYSKDMGYEDLDVSALLLV 83
SS D E E+ AL +I+ + V+S +PP + + + + G D V L
Sbjct: 5 SSGMTDYGEEQRNELEALESIYPDSFTVLSENPPSFTITV---TSEAGENDETVQTTLKF 61
Query: 84 RCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLS 143
YP + P +I ++ L +D ++L LL QA N G VMIF LV A QE L+
Sbjct: 62 TYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENL--GMVMIFTLVTAVQEKLN 119
Query: 144 EIV 146
EIV
Sbjct: 120 EIV 122
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 73/263 (27%)
Query: 420 SRYLNDFEELQPLGHGGFGHVVL-C---KNKLDGRHYAVKKIRLKDKSLP-VNDRILREV 474
RYL ++++ LG G FG V L C N G AVK LK+ P + RE+
Sbjct: 7 KRYL---KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA--LKEGCGPQLRSGWQREI 61
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L L H+H+V+Y G + G+
Sbjct: 62 EILRTLYHEHIVKY------KGCCEDQGEKS----------------------------- 86
Query: 535 STYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNN 592
+ + MEY P +LR + +L LF +QI EG+A++H Q IHR L N
Sbjct: 87 ---VQLVMEYVPLGSLRDYLPRHCVGLAQLL--LFAQQICEGMAYLHAQHYIHRALAARN 141
Query: 593 IFFDARNDIKIGDFGLAKFL----KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
+ D +KIGDFGLAK + + ++ +D P F+ APE
Sbjct: 142 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV----------------FWYAPEC 185
Query: 649 EQGWPKIDEKADMYSLGIVFFEL 671
+ K +D++S G+ +EL
Sbjct: 186 LKEC-KFYYASDVWSFGVTLYEL 207
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 115/284 (40%), Gaps = 76/284 (26%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPK 654
+ I++ DFG AK +K A P Y APEI +G+ K
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL-AGTPE-----------------YLAPEIILSKGYNK 217
Query: 655 IDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELP 695
D ++LG++ +E+ + PF QI + K P
Sbjct: 218 ---AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 41/195 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLD----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
+ ++ LG G FG V LC+ + G AVK ++ + + D + +E+ L L
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD-LKKEIEILRNLY 81
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H+++V+Y G+ DG G+G F L S L
Sbjct: 82 HENIVKY------KGICTEDG----GNGIKLIMEF----------------LPSGSL--- 112
Query: 542 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
EY P+ ++ + ++L + + QI +G+ ++ + +HRDL N+ ++ + +
Sbjct: 113 KEYLPKNKNKI-----NLKQQLKYAV--QICKGMDYLGSRQYVHRDLAARNVLVESEHQV 165
Query: 602 KIGDFGLAKFLKLEQ 616
KIGDFGL K ++ ++
Sbjct: 166 KIGDFGLTKAIETDK 180
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 101/264 (38%), Gaps = 67/264 (25%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 467
VD G P + L S Y+ +G G G V L + K GR AVK + L+ +
Sbjct: 38 VDQGDPRLLLDS--YVK-------IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR--R 86
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ + EV + QH +VV Y+++
Sbjct: 87 ELLFNEVVIMRDYQHFNVVEMYKSYL---------------------------------V 113
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
G+E L++ ME+ S ++E + +++ LA++H QG+IHRD
Sbjct: 114 GEE-------LWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE 647
+ ++I +K+ DFG Q+ +D ++ APE
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCA-----QISKDVP----------KRKXLVGTPYWMAPE 211
Query: 648 IEQGWPKIDEKADMYSLGIVFFEL 671
+ E D++SLGI+ E+
Sbjct: 212 VISRSLYATE-VDIWSLGIMVIEM 234
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 101/276 (36%), Gaps = 52/276 (18%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQ 490
L GGF V ++ GR YA+K RL N I++EV + +L H ++V++
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF-- 91
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
S+A + +E+ + E C L
Sbjct: 92 ------------------------------CSAASIGKEESDTGQAEFLLLTELCKGQLV 121
Query: 551 QVF---ESYDHFDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDARNDIKIGD 605
+ ES + +F Q + H+H Q IIHRDL N+ + IK+ D
Sbjct: 122 EFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD 181
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYS 663
FG A + D ++ Y PEI + I EK D+++
Sbjct: 182 FGSATTISHY---PDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWA 238
Query: 664 LGIVFFELW---HPFSTAMERQIVLSDLKQKGELPP 696
LG + + L HPF + +IV K +PP
Sbjct: 239 LGCILYLLCFRQHPFEDGAKLRIV----NGKYSIPP 270
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG-- 196
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 197 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 242 NRDQIIF--MVGRGYLSP 257
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 131 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG-- 188
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 189 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 234 NRDQIIF--MVGRGYLSP 249
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 138 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG-- 195
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 196 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 241 NRDQIIF--MVGRGYLSP 256
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 534 ESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
E +Y+ MEYC ++++ +S F A F Q+++GL ++H QGI+H+D+ P
Sbjct: 79 EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPG 138
Query: 592 NIFFDARNDIKIGDFGLAKFL 612
N+ +KI G+A+ L
Sbjct: 139 NLLLTTGGTLKISALGVAEAL 159
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 64
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 89
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 90 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 603 IGDFGLA 609
+ DFG++
Sbjct: 146 LCDFGVS 152
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 41/195 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLD----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
+ ++ LG G FG V LC+ + G AVK ++ + + D + +E+ L L
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD-LKKEIEILRNLY 69
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H+++V+Y G+ DG G+G F L S L
Sbjct: 70 HENIVKY------KGICTEDG----GNGIKLIMEF----------------LPSGSL--- 100
Query: 542 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
EY P+ ++ + ++L + + QI +G+ ++ + +HRDL N+ ++ + +
Sbjct: 101 KEYLPKNKNKI-----NLKQQLKYAV--QICKGMDYLGSRQYVHRDLAARNVLVESEHQV 153
Query: 602 KIGDFGLAKFLKLEQ 616
KIGDFGL K ++ ++
Sbjct: 154 KIGDFGLTKAIETDK 168
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 113 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG-- 170
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 171 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 215
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 216 NRDQIIF--MVGRGYLSP 231
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG-- 196
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 197 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 242 NRDQIIF--MVGRGYLSP 257
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 64
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 89
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 90 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 603 IGDFGLA 609
+ DFG++
Sbjct: 146 LCDFGVS 152
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG-- 173
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 174 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 219 NRDQIIF--MVGRGYLSP 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 88
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 89 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 120
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 121 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 177 QQGYIQVTDFGFAKRVK 193
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG-- 173
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 174 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 219 NRDQIIF--MVGRGYLSP 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLHECNSP 64
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 89
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 90 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 603 IGDFGLA 609
+ DFG++
Sbjct: 146 LCDFGVS 152
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 64
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 89
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 90 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 603 IGDFGLA 609
+ DFG++
Sbjct: 146 LCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 64
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 89
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 90 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 603 IGDFGLA 609
+ DFG++
Sbjct: 146 LCDFGVS 152
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 74
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 75 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 106
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 107 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 162
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 163 EQGYIQVTDFGFAKRVK 179
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 91
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 116
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 117 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 172
Query: 603 IGDFGLA 609
+ DFG++
Sbjct: 173 LCDFGVS 179
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG-- 168
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 169 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 214 NRDQIIF--MVGRGYLSP 229
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG-- 168
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 169 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 214 NRDQIIF--MVGRGYLSP 229
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 108
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 109 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 140
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 141 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 197 QQGYIQVTDFGFAKRVK 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA----KFLKLEQLDQDAAFP 624
RQ +G+ ++H + IIHRDL NNIF +KIGDFGLA ++ Q +Q +
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG-- 168
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAM 679
+ APE+ + K ++D+Y+ GIV +EL P+S
Sbjct: 169 ---------------SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
Query: 680 ER-QIVLSDLKQKGELPP 696
R QI+ + +G L P
Sbjct: 214 NRDQIIF--MVGRGYLSP 229
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 533 LESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
L+ST L+I MEY ++ + R+I++GL ++H + IHRD+ N
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAAN 146
Query: 593 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW 652
+ + D+K+ DFG+A L Q+ ++ F+ APE+ +
Sbjct: 147 VLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTP---------------FWMAPEVIKQ- 190
Query: 653 PKIDEKADMYSLGIVFFEL 671
D KAD++SLGI EL
Sbjct: 191 SAYDFKADIWSLGITAIEL 209
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 38/188 (20%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+NDF+ L+ LG G FG V+L + K GR+YA+K ILR+ +++ +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMK--------------ILRKEVIIAKDEV 49
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H V E+ V + A T G E + ++
Sbjct: 50 AHTVT------ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-----LFFHLSR 98
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E F +E A +IV L ++H + +++RD+ N+ D IK
Sbjct: 99 ERV-------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 603 IGDFGLAK 610
I DFGL K
Sbjct: 146 ITDFGLCK 153
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 67
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 92
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 93 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 148
Query: 603 IGDFGLA 609
+ DFG++
Sbjct: 149 LCDFGVS 155
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 108
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 109 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 140
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 141 MEYVAGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 197 QQGYIQVTDFGFAKRVK 213
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 38/188 (20%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+NDF+ L+ LG G FG V+L + K GR+YA+K ILR+ +++ +
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMK--------------ILRKEVIIAKDEV 54
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H V E+ V + A T G E + ++
Sbjct: 55 AHTVT------ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-----LFFHLSR 103
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E F +E A +IV L ++H + +++RD+ N+ D IK
Sbjct: 104 ERV-------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 150
Query: 603 IGDFGLAK 610
I DFGL K
Sbjct: 151 ITDFGLCK 158
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 38/188 (20%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+NDF+ L+ LG G FG V+L + K GR+YA+K ILR+ +++ +
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMK--------------ILRKEVIIAKDEV 52
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H V E+ V + A T G E + ++
Sbjct: 53 AHTVT------ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-----LFFHLSR 101
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E F +E A +IV L ++H + +++RD+ N+ D IK
Sbjct: 102 ERV-------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 148
Query: 603 IGDFGLAK 610
I DFGL K
Sbjct: 149 ITDFGLCK 156
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 38/188 (20%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+NDF+ L+ LG G FG V+L + K GR+YA+K ILR+ +++ +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMK--------------ILRKEVIIAKDEV 49
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H V E+ V + A T G E + ++
Sbjct: 50 AHTVT------ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-----LFFHLSR 98
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E F +E A +IV L ++H + +++RD+ N+ D IK
Sbjct: 99 ERV-------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 603 IGDFGLAK 610
I DFGL K
Sbjct: 146 ITDFGLCK 153
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 38/188 (20%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+NDF+ L+ LG G FG V+L + K GR+YA+K ILR+ +++ +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMK--------------ILRKEVIIAKDEV 49
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H V E+ V + A T G E + ++
Sbjct: 50 AHTVT------ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-----LFFHLSR 98
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E F +E A +IV L ++H + +++RD+ N+ D IK
Sbjct: 99 ERV-------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 603 IGDFGLAK 610
I DFGL K
Sbjct: 146 ITDFGLCK 153
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 82
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 83 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 114
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 115 MEYVAGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 170
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 171 QQGYIQVTDFGFAKRVK 187
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 50/201 (24%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
++ +L+ FE ++ LG G FG V+L K+ G HYA+K + DK ++V L
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK---ILDK---------QKVVKLK 83
Query: 479 RLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
+++H + R QA +F L FS + S+
Sbjct: 84 QIEHTLNEKRILQA------VNFP--------FLVKLEFSFKDNSN-------------- 115
Query: 538 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
LY+ MEY LR++ F + A QIV ++H +I+RDL P N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 593 IFFDARNDIKIGDFGLAKFLK 613
+ D + I++ DFG AK +K
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVK 192
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 50/197 (25%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L+ F+ ++ LG G FG V+L K+K G HYA+K + DK ++V L +++H
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDK---------QKVVKLKQIEH 87
Query: 483 Q-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
+ R QA +F L FS + S+ LY+
Sbjct: 88 TLNEKRILQA------VNFP--------FLVKLEFSFKDNSN--------------LYMV 119
Query: 542 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
MEY LR++ F + A QIV ++H +I+RDL P N+ D
Sbjct: 120 MEYVAGGEMFSHLRRI----GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 597 ARNDIKIGDFGLAKFLK 613
+ I++ DFG AK +K
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 38/188 (20%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+NDF+ L+ LG G FG V+L + K GR+YA+K ILR+ +++ +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMK--------------ILRKEVIIAKDEV 49
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H V E+ V + A T G E + ++
Sbjct: 50 AHTVT------ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-----LFFHLSR 98
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E F +E A +IV L ++H + +++RD+ N+ D IK
Sbjct: 99 ERV-------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 603 IGDFGLAK 610
I DFGL K
Sbjct: 146 ITDFGLCK 153
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 38/188 (20%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+NDF+ L+ LG G FG V+L + K GR+YA+K ILR+ +++ +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMK--------------ILRKEVIIAKDEV 49
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H V E+ V + A T G E + ++
Sbjct: 50 AHTVT------ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-----LFFHLSR 98
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E F +E A +IV L ++H + +++RD+ N+ D IK
Sbjct: 99 ERV-------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 603 IGDFGLAK 610
I DFGL K
Sbjct: 146 ITDFGLCK 153
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 72/260 (27%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKK---IRLKDKSLPVNDRILREVATLSRL-Q 481
FE ++ +G+G +G V GRH + I++ D + + I +E+ L +
Sbjct: 26 FELVELVGNGTYGQV------YKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH 79
Query: 482 HQHVVRYYQAWFETGVADFDGDSMW------GSGTLASSTFSNRAASSADVTGQENKLES 535
H+++ YY A+ + D D +W G+G++ + +
Sbjct: 80 HRNIATYYGAFIKKNPPGMD-DQLWLVMEFCGAGSVTDLIKNTKG--------------- 123
Query: 536 TYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
TL++ + +Y + R+I+ GL+H+H +IHRD+ N+
Sbjct: 124 -----------NTLKEEWIAY----------ICREILRGLSHLHQHKVIHRDIKGQNVLL 162
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI----EQG 651
++K+ DFG++ QLD+ ++ APE+ E
Sbjct: 163 TENAEVKLVDFGVSA-----QLDRTVG----------RRNTFIGTPYWMAPEVIACDENP 207
Query: 652 WPKIDEKADMYSLGIVFFEL 671
D K+D++SLGI E+
Sbjct: 208 DATYDFKSDLWSLGITAIEM 227
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 518 NRAASSADVTGQENKLEST-YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGL 575
+R+ + V G E ++++ +E C R +L ++ + + A + RQIV G
Sbjct: 71 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 130
Query: 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL--EQLDQDAAFPXXXXXXXXX 633
++H +IHRDL N+F + ++KIGDFGLA ++ E+ P
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN-------- 182
Query: 634 XXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDL 688
Y APE+ ++G + D++S+G + + L PF T+ ++ L
Sbjct: 183 ---------YIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 230
Query: 689 KQKGELP 695
K + +P
Sbjct: 231 KNEYSIP 237
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 518 NRAASSADVTGQENKLEST-YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGL 575
+R+ + V G E ++++ +E C R +L ++ + + A + RQIV G
Sbjct: 75 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 134
Query: 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL--EQLDQDAAFPXXXXXXXXX 633
++H +IHRDL N+F + ++KIGDFGLA ++ E+ P
Sbjct: 135 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN-------- 186
Query: 634 XXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDL 688
Y APE+ ++G + D++S+G + + L PF T+ ++ L
Sbjct: 187 ---------YIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 234
Query: 689 KQKGELP 695
K + +P
Sbjct: 235 KNEYSIP 241
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 116/300 (38%), Gaps = 61/300 (20%)
Query: 406 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 465
P ++ P++ + + DF + LG G FG V L + K + +A+K ++
Sbjct: 1 PELNKERPSLQIKLK--IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK------- 51
Query: 466 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 525
D +L + + + V+ AW + T TF +
Sbjct: 52 -KDVVLMDDDVECTMVEKRVLSL--AWEHPFL------------THMFCTFQTK------ 90
Query: 526 VTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 584
EN L+ MEY L +S FD A +I+ GL +H +GI+
Sbjct: 91 ----EN------LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIV 140
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYT 644
+RDL +NI D IKI DFG+ K E + DA Y
Sbjct: 141 YRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNXFCGTPD-----------YI 185
Query: 645 APEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAK 701
APEI G K + D +S G++ +E+ PF E ++ S ++ P W+ K
Sbjct: 186 APEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS-IRMDNPFYPRWLEK 243
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 518 NRAASSADVTGQENKLEST-YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGL 575
+R+ + V G E ++++ +E C R +L ++ + + A + RQIV G
Sbjct: 71 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 130
Query: 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL--EQLDQDAAFPXXXXXXXXX 633
++H +IHRDL N+F + ++KIGDFGLA ++ E+ P
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN-------- 182
Query: 634 XXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDL 688
Y APE+ ++G + D++S+G + + L PF T+ ++ L
Sbjct: 183 ---------YIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 230
Query: 689 KQKGELP 695
K + +P
Sbjct: 231 KNEYSIP 237
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 100/264 (37%), Gaps = 67/264 (25%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 467
VD G P YL++F ++ G G G V + + G+ AVKK+ L+ +
Sbjct: 144 VDPGDPR------SYLDNFIKI---GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--R 192
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ + EV + QH++VV Y ++ GD +W
Sbjct: 193 ELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELW--------------------- 224
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 225 ------------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE 647
+ ++I +K+ DFG + E ++ APE
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKE---------------VPRRKXLVGTPYWMAPE 317
Query: 648 IEQGWPKIDEKADMYSLGIVFFEL 671
+ P E D++SLGI+ E+
Sbjct: 318 LISRLPYGPE-VDIWSLGIMVIEM 340
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 83
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
++V +Y A++ G + M G
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 108
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 109 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 164
Query: 603 IGDFGLA 609
+ DFG++
Sbjct: 165 LCDFGVS 171
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 102/252 (40%), Gaps = 69/252 (27%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
LG G FG V C+ G A K I K + + + + E++ +++L H ++++ Y A
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKII--KTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL-- 549
FE S D+ + MEY
Sbjct: 155 -FE---------------------------SKNDIV------------LVMEYVDGGELF 174
Query: 550 -RQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGD 605
R + ESY+ EL LF +QI EG+ H+H I+H DL P NI R+ IKI D
Sbjct: 175 DRIIDESYNL--TELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIID 232
Query: 606 FGLAKFLK-LEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSL 664
FGLA+ K E+L + P + APE+ + + DM+S+
Sbjct: 233 FGLARRYKPREKLKVNFGTPE-----------------FLAPEV-VNYDFVSFPTDMWSV 274
Query: 665 GIVFFELWHPFS 676
G++ + L S
Sbjct: 275 GVIAYMLLSGLS 286
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 67/264 (25%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 467
VD G P YL++F ++ G G G V + + G+ AVKK+ L+ +
Sbjct: 24 VDPGDPR------SYLDNFIKI---GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--R 72
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ + EV + QH++VV Y ++ GD +W
Sbjct: 73 ELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELW--------------------- 104
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 105 ------------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE 647
+ ++I +K+ DFG Q+ ++ ++ APE
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCA-----QVSKEVP----------RRKXLVGTPYWMAPE 197
Query: 648 IEQGWPKIDEKADMYSLGIVFFEL 671
+ P E D++SLGI+ E+
Sbjct: 198 LISRLPYGPE-VDIWSLGIMVIEM 220
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 39/148 (26%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAAFPX 625
+ R ++E ++ +H I+HRDL P NI D I++ DFG + L+ E+L + P
Sbjct: 205 IMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPG 264
Query: 626 XXXXXXXXXXXXXXXYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL-------WH 673
Y APEI ++ P ++ D+++ G++ F L WH
Sbjct: 265 -----------------YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
Query: 674 PFSTAMERQIVLSDLKQKGEL---PPSW 698
RQI++ + +G+ P W
Sbjct: 308 ------RRQILMLRMIMEGQYQFSSPEW 329
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 67/264 (25%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 467
VD G P YL++F ++ G G G V + + G+ AVKK+ L+ +
Sbjct: 22 VDPGDPR------SYLDNFIKI---GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--R 70
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ + EV + QH++VV Y ++ GD +W
Sbjct: 71 ELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELW--------------------- 102
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 103 ------------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE 647
+ ++I +K+ DFG Q+ ++ ++ APE
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCA-----QVSKEVP----------RRKXLVGTPYWMAPE 195
Query: 648 IEQGWPKIDEKADMYSLGIVFFEL 671
+ P E D++SLGI+ E+
Sbjct: 196 LISRLPYGPE-VDIWSLGIMVIEM 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 518 NRAASSADVTGQENKLEST-YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGL 575
+R+ + V G E ++++ +E C R +L ++ + + A + RQIV G
Sbjct: 93 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 152
Query: 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 609
++H +IHRDL N+F + ++KIGDFGLA
Sbjct: 153 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 67/264 (25%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 467
VD G P YL++F ++ G G G V + + G+ AVKK+ L+ +
Sbjct: 13 VDPGDPR------SYLDNFIKI---GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--R 61
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ + EV + QH++VV Y ++ GD +W
Sbjct: 62 ELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELW--------------------- 93
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 94 ------------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE 647
+ ++I +K+ DFG Q+ ++ ++ APE
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCA-----QVSKEVP----------RRKXLVGTPYWMAPE 186
Query: 648 IEQGWPKIDEKADMYSLGIVFFEL 671
+ P E D++SLGI+ E+
Sbjct: 187 LISRLPYGPE-VDIWSLGIMVIEM 209
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 518 NRAASSADVTGQENKLEST-YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGL 575
+R+ + V G E ++++ +E C R +L ++ + + A + RQIV G
Sbjct: 95 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 154
Query: 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 609
++H +IHRDL N+F + ++KIGDFGLA
Sbjct: 155 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 518 NRAASSADVTGQENKLEST-YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGL 575
+R+ + V G E ++++ +E C R +L ++ + + A + RQIV G
Sbjct: 69 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 128
Query: 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 609
++H +IHRDL N+F + ++KIGDFGLA
Sbjct: 129 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 98/255 (38%), Gaps = 60/255 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQ 490
LG G V C N + + YAVK I + + R+ REV L + Q H++V+ +
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGH--IRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ E + M G G++ S R
Sbjct: 79 FFEEEDRFYLVFEKMRG-GSILSHIHKRR------------------------------- 106
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFG 607
HF++ A + + + L +H +GI HRDL P NI + N +KI DFG
Sbjct: 107 -------HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFG 159
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK----IDEKADMYS 663
L +KL + P Y APE+ + + + D++ D++S
Sbjct: 160 LGSGIKLNGDCSPISTPELLTPCGSAE--------YMAPEVVEAFSEEASIYDKRCDLWS 211
Query: 664 LGIVFFEL---WHPF 675
LG++ + L + PF
Sbjct: 212 LGVILYILLSGYPPF 226
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 67/264 (25%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 467
VD G P YL++F ++ G G G V + + G+ AVKK+ L+ +
Sbjct: 17 VDPGDPR------SYLDNFIKI---GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--R 65
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ + EV + QH++VV Y ++ GD +W
Sbjct: 66 ELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELW--------------------- 97
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 98 ------------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE 647
+ ++I +K+ DFG Q+ ++ ++ APE
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCA-----QVSKEVP----------RRKXLVGTPYWMAPE 190
Query: 648 IEQGWPKIDEKADMYSLGIVFFEL 671
+ P E D++SLGI+ E+
Sbjct: 191 LISRLPYGPE-VDIWSLGIMVIEM 213
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 67/264 (25%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 467
VD G P YL++F ++ G G G V + + G+ AVKK+ L+ +
Sbjct: 67 VDPGDPR------SYLDNFIKI---GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--R 115
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
+ + EV + QH++VV Y ++ GD +W
Sbjct: 116 ELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELW--------------------- 147
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 148 ------------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE 647
+ ++I +K+ DFG Q+ ++ ++ APE
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCA-----QVSKEVP----------RRKXLVGTPYWMAPE 240
Query: 648 IEQGWPKIDEKADMYSLGIVFFEL 671
+ P E D++SLGI+ E+
Sbjct: 241 LISRLPYGPE-VDIWSLGIMVIEM 263
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 97/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + ENK + L +++
Sbjct: 77 ITLHEVY-------------------------------------ENKTD-VILILEL-VA 97
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
L + +E A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPA-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 64/253 (25%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D + +G G FG V + + G AVK + +D + LREVA + RL+H +
Sbjct: 38 DLNIKEKIGAGSFGTV--HRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+V + A VT N L I EY
Sbjct: 96 IVLFMGA----------------------------------VTQPPN------LSIVTEY 115
Query: 545 CPR-TLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDAR 598
R +L ++ + + D+ + + +G+ ++H + I+HRDL N+ D +
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKK 175
Query: 599 NDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEK 658
+K+ DFGL++ L A + APE+ + P +EK
Sbjct: 176 YTVKVCDFGLSRLKASXFLXSKXAAGTPE---------------WMAPEVLRDEPS-NEK 219
Query: 659 ADMYSLGIVFFEL 671
+D+YS G++ +EL
Sbjct: 220 SDVYSFGVILWEL 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 44/211 (20%)
Query: 406 PSVDSGSPNMSL----PSSRY-LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
PS +SG+ M + P R +N+FE L+ LG G FG V+L K K GR+YA+K LK
Sbjct: 128 PSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI--LK 185
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
+ + D EVA L V++ + F T + + T F
Sbjct: 186 KEVIVAKD----EVA--HTLTENRVLQNSRHPFLTALK-------YSFQTHDRLCFVMEY 232
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
A+ ++ + ++ E F ++ A +IV L ++H
Sbjct: 233 ANGGEL----------FFHLSRERV-------------FSEDRARFYGAEIVSALDYLHS 269
Query: 581 Q-GIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+ +++RDL N+ D IKI DFGL K
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 97/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + ENK + L +++
Sbjct: 77 ITLHEVY-------------------------------------ENKTD-VILILEL-VA 97
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
L + +E A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 50/201 (24%)
Query: 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 474
M LP + +E ++ +G G FG L ++K AVK I +K +++ + RE+
Sbjct: 10 MDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEK---IDENVKREI 66
Query: 475 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 534
L+H ++VR+ +E L
Sbjct: 67 INHRSLRHPNIVRF----------------------------------------KEVILT 86
Query: 535 STYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 591
T+L I MEY + ++FE + F ++ A F+Q++ G+++ H + HRDL
Sbjct: 87 PTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLE 144
Query: 592 NIFFDAR--NDIKIGDFGLAK 610
N D +KI DFG +K
Sbjct: 145 NTLLDGSPAPRLKIADFGYSK 165
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 35/154 (22%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLE 615
F + A + R I + +H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 106 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 165
Query: 616 QLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---W 672
L P +Y APE+ G K D+ DM+SLG++ + L +
Sbjct: 166 ALQTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGF 207
Query: 673 HPF--------STAMERQIVLSDLKQKGELPPSW 698
PF S M+R+I L Q G P W
Sbjct: 208 PPFYSNTGQAISPGMKRRIRLG---QYGFPNPEW 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 45/186 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D++ ++ +G G FG V L ++K + YA+K +L + + R
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMK--------------LLSKFEMIKRSDSAF 121
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
W E + F +S W + Q++K YLY+ MEY
Sbjct: 122 F------WEERDIMAF-ANSPWVVQLFCAF--------------QDDK----YLYMVMEY 156
Query: 545 CPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P L + +YD +K W F ++V L IH G+IHRD+ P+N+ D +
Sbjct: 157 MPGGDLVNLMSNYDVPEK---WAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHL 213
Query: 602 KIGDFG 607
K+ DFG
Sbjct: 214 KLADFG 219
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 44/211 (20%)
Query: 406 PSVDSGSPNMSL----PSSRY-LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 460
PS +SG+ M + P R +N+FE L+ LG G FG V+L K K GR+YA+K LK
Sbjct: 125 PSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI--LK 182
Query: 461 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
+ + D EVA L V++ + F T + + T F
Sbjct: 183 KEVIVAKD----EVA--HTLTENRVLQNSRHPFLTALK-------YSFQTHDRLCFVMEY 229
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
A+ ++ + ++ E F ++ A +IV L ++H
Sbjct: 230 ANGGEL----------FFHLSRERV-------------FSEDRARFYGAEIVSALDYLHS 266
Query: 581 Q-GIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+ +++RDL N+ D IKI DFGL K
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 62/255 (24%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+D E + LG G +G V ++ G+ AVK+IR S ++ ++ +
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
V +Y A F G +W L ++ L+ Y
Sbjct: 67 FTVTFYGALFREG-------DVWICMELMDTS-----------------LDKFY------ 96
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+QV + +++ + IV+ L H+H + +IHRD+ P+N+ +A +K
Sbjct: 97 ------KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 150
Query: 603 IGDFGLAKFLKLE-QLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE---- 657
+ DFG++ +L + D DA Y AP E+ P++++
Sbjct: 151 MCDFGISGYLVDDVAKDIDAGCKP-----------------YMAP--ERINPELNQKGYS 191
Query: 658 -KADMYSLGIVFFEL 671
K+D++SLGI EL
Sbjct: 192 VKSDIWSLGITMIEL 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 35/154 (22%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLE 615
F + A + R I + +H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184
Query: 616 QLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---W 672
L P +Y APE+ G K D+ DM+SLG++ + L +
Sbjct: 185 ALQTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGF 226
Query: 673 HPF--------STAMERQIVLSDLKQKGELPPSW 698
PF S M+R+I L Q G P W
Sbjct: 227 PPFYSNTGQAISPGMKRRIRLG---QYGFPNPEW 257
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 77 ITLHEVY------ENKTDVILIGELVAGGELFDFLAEKESLTEEE--------------- 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 116 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF-DARND- 600
E + LRQ F F + A + I + + ++H QG++HRDL P+NI + D +
Sbjct: 107 ELLDKILRQKF-----FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNP 161
Query: 601 --IKIGDFGLAKFLKLEQ-LDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKI 655
++I DFG AK L+ E L + + APE+ QG+
Sbjct: 162 ECLRICDFGFAKQLRAENGLLMTPCYTAN----------------FVAPEVLKRQGY--- 202
Query: 656 DEKADMYSLGIVFFEL---WHPFSTA 678
DE D++SLGI+ + + + PF+
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANG 228
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 93/245 (37%), Gaps = 55/245 (22%)
Query: 432 LGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQHVVRYY 489
LG G FG V LC+ + L A+ ++ S P R RE+ L L +V+Y
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 73
Query: 490 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 548
GV+ +G G L + MEY P
Sbjct: 74 -----RGVS-------YGPGR-------------------------PELRLVMEYLPSGC 96
Query: 549 LRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 607
LR + + D QI +G+ ++ + +HRDL NI ++ +KI DFG
Sbjct: 97 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 156
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
LAK L LD+D F+ APE ++D++S G+V
Sbjct: 157 LAKLLP---LDKDXXV---------VREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVV 203
Query: 668 FFELW 672
+EL+
Sbjct: 204 LYELF 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 64/253 (25%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D + +G G FG V + + G AVK + +D + LREVA + RL+H +
Sbjct: 38 DLNIKEKIGAGSFGTV--HRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+V + A VT N L I EY
Sbjct: 96 IVLFMGA----------------------------------VTQPPN------LSIVTEY 115
Query: 545 CPR-TLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDAR 598
R +L ++ + + D+ + + +G+ ++H + I+HR+L N+ D +
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK 175
Query: 599 NDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEK 658
+K+ DFGL++ L +A + APE+ + P +EK
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSKSAAGTPE---------------WMAPEVLRDEPS-NEK 219
Query: 659 ADMYSLGIVFFEL 671
+D+YS G++ +EL
Sbjct: 220 SDVYSFGVILWEL 232
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD--AAFPXXX 627
QIV GL H+H + II+RDL P N+ D +++I D GLA LK Q A P
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG-- 354
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIV 684
+ APE+ G + D D ++LG+ +E+ PF E+ +
Sbjct: 355 ---------------FMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VE 397
Query: 685 LSDLKQK 691
+LKQ+
Sbjct: 398 NKELKQR 404
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAV 454
F + + LG GGFG V C+ K G+ YA
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYAC 215
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD--AAFPXXX 627
QIV GL H+H + II+RDL P N+ D +++I D GLA LK Q A P
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG-- 354
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIV 684
+ APE+ G + D D ++LG+ +E+ PF E+ +
Sbjct: 355 ---------------FMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VE 397
Query: 685 LSDLKQK 691
+LKQ+
Sbjct: 398 NKELKQR 404
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAV 454
F + + LG GGFG V C+ K G+ YA
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYAC 215
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD--AAFPXXX 627
QIV GL H+H + II+RDL P N+ D +++I D GLA LK Q A P
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG-- 354
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIV 684
+ APE+ G + D D ++LG+ +E+ PF E+ +
Sbjct: 355 ---------------FMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VE 397
Query: 685 LSDLKQK 691
+LKQ+
Sbjct: 398 NKELKQR 404
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAV 454
F + + LG GGFG V C+ K G+ YA
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYAC 215
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD--AAFPXXX 627
QIV GL H+H + II+RDL P N+ D +++I D GLA LK Q A P
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG-- 354
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIV 684
+ APE+ G + D D ++LG+ +E+ PF E+ +
Sbjct: 355 ---------------FMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VE 397
Query: 685 LSDLKQK 691
+LKQ+
Sbjct: 398 NKELKQR 404
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAV 454
F + + LG GGFG V C+ K G+ YA
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYAC 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 94/250 (37%), Gaps = 61/250 (24%)
Query: 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 481
YL +F ++ G G G V + K G+ AVKK+ L+ + + + EV +
Sbjct: 46 YLANFIKI---GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--RELLFNEVVIMRDYH 100
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +VV Y ++ GD +W +
Sbjct: 101 HDNVVDMYSSYLV-------GDELW---------------------------------VV 120
Query: 542 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
ME+ ++ ++E + ++ L+++H QG+IHRD+ ++I + I
Sbjct: 121 MEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRI 180
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
K+ DFG + E + ++ APE+ P E D+
Sbjct: 181 KLSDFGFCAQVSKEVPKRKXLVGTP---------------YWMAPEVISRLPYGTE-VDI 224
Query: 662 YSLGIVFFEL 671
+SLGI+ E+
Sbjct: 225 WSLGIMVIEM 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 77 ITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEE--------------- 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 116 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 77 ITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEE--------------- 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 116 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 77 ITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEE--------------- 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 116 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 60/254 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+D E + LG G +G V ++ G+ AVK+IR S ++ ++ +
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
V +Y A F G +W L ++ L+ Y
Sbjct: 111 FTVTFYGALFREG-------DVWICMELMDTS-----------------LDKFY------ 140
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 602
+QV + +++ + IV+ L H+H + +IHRD+ P+N+ +A +K
Sbjct: 141 ------KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 194
Query: 603 IGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE----- 657
+ DFG++ +L +D A Y AP E+ P++++
Sbjct: 195 MCDFGISGYL----VDSVAK------------TIDAGCKPYMAP--ERINPELNQKGYSV 236
Query: 658 KADMYSLGIVFFEL 671
K+D++SLGI EL
Sbjct: 237 KSDIWSLGITMIEL 250
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF-DARND- 600
E + LRQ F F + A + I + + ++H QG++HRDL P+NI + D +
Sbjct: 107 ELLDKILRQKF-----FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNP 161
Query: 601 --IKIGDFGLAKFLKLEQ-LDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKI 655
++I DFG AK L+ E L + + APE+ QG+
Sbjct: 162 ECLRICDFGFAKQLRAENGLLMTPCYTAN----------------FVAPEVLKRQGY--- 202
Query: 656 DEKADMYSLGIVFFEL---WHPFSTA 678
DE D++SLGI+ + + + PF+
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANG 228
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 104/271 (38%), Gaps = 62/271 (22%)
Query: 408 VDSGSPNMSLPSSRYLNDFEEL--QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 465
VD G+ N+ S N+F L + LG G F V C +K G+ YA K ++ + +
Sbjct: 11 VDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD 70
Query: 466 VNDRILREVATLSRLQH-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 524
IL E+A L + V+ ++ + T + G FS A
Sbjct: 71 CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG-----GEIFSLCLPELA 125
Query: 525 DVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 584
++ + + + R ++Q+ +EG+ ++H I+
Sbjct: 126 EMVSENDVI-------------RLIKQI-------------------LEGVYYLHQNNIV 153
Query: 585 HRDLTPNNIFFDA---RNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXX 640
H DL P NI + DIKI DFG++ K +L + P
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE--------------- 198
Query: 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
Y APEI + I DM+++GI+ + L
Sbjct: 199 --YLAPEI-LNYDPITTATDMWNIGIIAYML 226
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 95/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + ENK + + I
Sbjct: 77 ITLHEVY-------------------------------------ENK--TDVILILELVA 97
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
L + +E A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 77 ITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEE--------------- 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 116 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 97/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + ENK + L +++
Sbjct: 77 ITLHEVY-------------------------------------ENKTD-VILILEL-VA 97
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
L + +E A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 77 ITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEE--------------- 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 116 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 94/245 (38%), Gaps = 55/245 (22%)
Query: 432 LGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQHVVRYY 489
LG G FG V LC+ + L A+ ++ S P R RE+ L L +V+Y
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 76
Query: 490 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 548
GV+ +G G + L + MEY P
Sbjct: 77 -----RGVS-------YGPGRQS-------------------------LRLVMEYLPSGC 99
Query: 549 LRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 607
LR + + D QI +G+ ++ + +HRDL NI ++ +KI DFG
Sbjct: 100 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 159
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
LAK L LD+D F+ APE ++D++S G+V
Sbjct: 160 LAKLLP---LDKD---------YYVVREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVV 206
Query: 668 FFELW 672
+EL+
Sbjct: 207 LYELF 211
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 45/186 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D+E ++ +G G FG V L ++K + YA+K +L + + R
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK--------------LLSKFEMIKRSDSAF 115
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
W E + F +S W + + YLY+ MEY
Sbjct: 116 F------WEERDIMAF-ANSPWVVQLFYAFQ------------------DDRYLYMVMEY 150
Query: 545 CPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P L + +YD +K W F ++V L IH G IHRD+ P+N+ D +
Sbjct: 151 MPGGDLVNLMSNYDVPEK---WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 207
Query: 602 KIGDFG 607
K+ DFG
Sbjct: 208 KLADFG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 77 ITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEE--------------- 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 116 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 94/245 (38%), Gaps = 55/245 (22%)
Query: 432 LGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQHVVRYY 489
LG G FG V LC+ + L A+ ++ S P R RE+ L L +V+Y
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 89
Query: 490 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 548
GV+ +G G + L + MEY P
Sbjct: 90 -----RGVS-------YGPGRQS-------------------------LRLVMEYLPSGC 112
Query: 549 LRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 607
LR + + D QI +G+ ++ + +HRDL NI ++ +KI DFG
Sbjct: 113 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 172
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
LAK L LD+D F+ APE ++D++S G+V
Sbjct: 173 LAKLLP---LDKD---------YYVVREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVV 219
Query: 668 FFELW 672
+EL+
Sbjct: 220 LYELF 224
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 76 ITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEE--------------- 114
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 115 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 157 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 199
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 200 WSIGVITYIL 209
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 76 ITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEE--------------- 114
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 115 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 157 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 199
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 200 WSIGVITYIL 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 45/186 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D+E ++ +G G FG V L ++K + YA+K +L + + R
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK--------------LLSKFEMIKRSDSAF 120
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
W E + F +S W + + YLY+ MEY
Sbjct: 121 F------WEERDIMAF-ANSPWVVQLFYAFQ------------------DDRYLYMVMEY 155
Query: 545 CPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P L + +YD +K W F ++V L IH G IHRD+ P+N+ D +
Sbjct: 156 MPGGDLVNLMSNYDVPEK---WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 212
Query: 602 KIGDFG 607
K+ DFG
Sbjct: 213 KLADFG 218
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 94/245 (38%), Gaps = 55/245 (22%)
Query: 432 LGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQHVVRYY 489
LG G FG V LC+ + L A+ ++ S P R RE+ L L +V+Y
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 77
Query: 490 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 548
GV+ +G G + L + MEY P
Sbjct: 78 -----RGVS-------YGPGRQS-------------------------LRLVMEYLPSGC 100
Query: 549 LRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 607
LR + + D QI +G+ ++ + +HRDL NI ++ +KI DFG
Sbjct: 101 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 160
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
LAK L LD+D F+ APE ++D++S G+V
Sbjct: 161 LAKLLP---LDKD---------YYVVREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVV 207
Query: 668 FFELW 672
+EL+
Sbjct: 208 LYELF 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 45/186 (24%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D+E ++ +G G FG V L ++K + YA+K +L + + R
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK--------------LLSKFEMIKRSDSAF 120
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
W E + F +S W + + YLY+ MEY
Sbjct: 121 F------WEERDIMAF-ANSPWVVQLFYAFQ------------------DDRYLYMVMEY 155
Query: 545 CPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
P L + +YD +K W F ++V L IH G IHRD+ P+N+ D +
Sbjct: 156 MPGGDLVNLMSNYDVPEK---WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 212
Query: 602 KIGDFG 607
K+ DFG
Sbjct: 213 KLADFG 218
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 64/250 (25%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQHQHV 485
+ LG G F V C+ K G YA +KK R K V+ + I REV+ L +QH +V
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
+ ++ + + D + +A + A +T +E
Sbjct: 77 ITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEE--------------- 115
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DI 601
A +QI+ G+ ++H I H DL P NI RN I
Sbjct: 116 ------------------ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 602 KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
KI DFGLA ++D F + APEI P + +ADM
Sbjct: 158 KIIDFGLA-----HKIDFGNEFKNIFGTPE-----------FVAPEIVNYEP-LGLEADM 200
Query: 662 YSLGIVFFEL 671
+S+G++ + L
Sbjct: 201 WSIGVITYIL 210
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 50/195 (25%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
S RY DF ++ +G G FG L ++KL AVK I ++ +++ + RE+
Sbjct: 19 SDRY--DF--VKDIGSGNFGVARLMRDKLTKELVAVKYI---ERGAAIDENVQREIINHR 71
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 538
L+H ++VR+ +E L T+L
Sbjct: 72 SLRHPNIVRF----------------------------------------KEVILTPTHL 91
Query: 539 YIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
I MEY L + + F ++ A F+Q++ G+++ H I HRDL N D
Sbjct: 92 AIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDG 151
Query: 598 R--NDIKIGDFGLAK 610
+KI DFG +K
Sbjct: 152 SPAPRLKICDFGYSK 166
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 105/269 (39%), Gaps = 71/269 (26%)
Query: 415 MSLPSSRY---LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRIL 471
+++ RY +ND E L +G G G V + + G AVK++R + + N RIL
Sbjct: 13 LTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR-RSGNKEENKRIL 71
Query: 472 REVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 531
++ + + H Y F T + + D
Sbjct: 72 MDLDVVLK---SHDCPYIVQCFGTFITNTD------------------------------ 98
Query: 532 KLESTYLYIQMEY---CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI-HGQGIIHRD 587
++I ME C L++ + + + + IV+ L ++ G+IHRD
Sbjct: 99 ------VFIAMELMGTCAEKLKKRMQG--PIPERILGKMTVAIVKALYYLKEKHGVIHRD 150
Query: 588 LTPNNIFFDARNDIKIGDFGLA-KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
+ P+NI D R IK+ DFG++ + + + D+ A Y AP
Sbjct: 151 VKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA-----------------YMAP 193
Query: 647 E----IEQGWPKIDEKADMYSLGIVFFEL 671
E + P D +AD++SLGI EL
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVEL 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 108/279 (38%), Gaps = 72/279 (25%)
Query: 405 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 464
+P+V S M LP + +E ++ +G G FG L ++K AVK I +K
Sbjct: 3 RPAV---SGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK-- 57
Query: 465 PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 524
+++ + RE+ L+H ++VR+
Sbjct: 58 -IDENVKREIINHRSLRHPNIVRF------------------------------------ 80
Query: 525 DVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQ 581
+E L T+L I MEY + ++FE + F ++ A F+Q++ G+++ H
Sbjct: 81 ----KEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 582 GIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXX 639
+ HRDL N D +KI FG +K L +D
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPA------------- 181
Query: 640 XYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPF 675
Y APE+ + AD++S G+ + + +PF
Sbjct: 182 ---YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 65/256 (25%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
D ++L +G G +G V +K G+ AVK+IR ++ + +
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY 82
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+V++Y A F G W L S++F Y+Y ++
Sbjct: 83 IVQFYGALFREG-------DCWICMELMSTSFDKFYK---------------YVYSVLD- 119
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKI 603
D +E+ + V+ L H+ IIHRD+ P+NI D +IK+
Sbjct: 120 ------------DVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL 167
Query: 604 GDFGLAKFL--KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE------IEQGWPKI 655
DFG++ L + + P Y APE QG+
Sbjct: 168 CDFGISGQLVDSIAKTRDAGCRP------------------YMAPERIDPSASRQGY--- 206
Query: 656 DEKADMYSLGIVFFEL 671
D ++D++SLGI +EL
Sbjct: 207 DVRSDVWSLGITLYEL 222
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 53/211 (25%)
Query: 405 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 464
+P+V S M LP + +E ++ +G G FG L ++K AVK I +K
Sbjct: 3 RPAV---SGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK-- 57
Query: 465 PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 524
+ + RE+ L+H ++VR+
Sbjct: 58 -IAANVKREIINHRSLRHPNIVRF------------------------------------ 80
Query: 525 DVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQ 581
+E L T+L I MEY + ++FE + F ++ A F+Q++ G+++ H
Sbjct: 81 ----KEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 582 GIIHRDLTPNNIFFDAR--NDIKIGDFGLAK 610
+ HRDL N D +KI DFG +K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 165
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 34/146 (23%)
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF--DARN- 599
E + LRQ F S ++E + LF I + + ++H QG++HRDL P+NI + ++ N
Sbjct: 102 ELLDKILRQKFFS----EREASAVLF-TITKTVEYLHAQGVVHRDLKPSNILYVDESGNP 156
Query: 600 -DIKIGDFGLAKFLKLEQ-LDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKI 655
I+I DFG AK L+ E L + + APE+ QG+
Sbjct: 157 ESIRICDFGFAKQLRAENGLLMTPCYTAN----------------FVAPEVLERQGY--- 197
Query: 656 DEKADMYSLGIVFFEL---WHPFSTA 678
D D++SLG++ + + + PF+
Sbjct: 198 DAACDIWSLGVLLYTMLTGYTPFANG 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 50/199 (25%)
Query: 417 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 476
LP + +E ++ +G G FG L ++K AVK I +K +++ + RE+
Sbjct: 11 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK---IDENVKREIIN 67
Query: 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 536
L+H ++VR+ +E L T
Sbjct: 68 HRSLRHPNIVRF----------------------------------------KEVILTPT 87
Query: 537 YLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593
+L I MEY + ++FE + F ++ A F+Q++ G+++ H + HRDL N
Sbjct: 88 HLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 145
Query: 594 FFDAR--NDIKIGDFGLAK 610
D +KI DFG +K
Sbjct: 146 LLDGSPAPRLKICDFGYSK 164
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 36/216 (16%)
Query: 488 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE---STYLYIQMEY 544
Y + + ++ D ++ L +T +A ++ + LE + + + Y
Sbjct: 67 YGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHY 126
Query: 545 CPRTLRQVFESYDHFDK-ELAWHLFR--------------QIVEGLAHIHGQGIIHRDLT 589
+T ++ D+ + EL HL + +IV L H+H GII+RD+
Sbjct: 127 AFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIK 186
Query: 590 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIE 649
NI D+ + + DFGL+K ++ ++ F Y AP+I
Sbjct: 187 LENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE--------------YMAPDIV 232
Query: 650 QGWPKIDEKA-DMYSLGIVFFELW---HPFSTAMER 681
+G +KA D +SLG++ +EL PF+ E+
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK 268
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 41/190 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL-KDKSLP--VNDRILREVATLSRLQH 482
+E + +G G F V C N+ G+ +AVK + + K S P + + RE + L+H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H+V + + G+ + M G+
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGA---------------------------------- 113
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 600
+ C +++ + + + +A H RQI+E L + H IIHRD+ P+ + ++ +
Sbjct: 114 DLCFEIVKRADAGFV-YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSA 172
Query: 601 -IKIGDFGLA 609
+K+G FG+A
Sbjct: 173 PVKLGGFGVA 182
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 97/255 (38%), Gaps = 60/255 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQ 490
LG G V C N + + YAVK I + + R+ REV L + Q H++V+ +
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGH--IRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 550
+ E + M G G++ S R
Sbjct: 79 FFEEEDRFYLVFEKMRG-GSILSHIHKRR------------------------------- 106
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFG 607
HF++ A + + + L +H +GI HRDL P NI + N +KI DF
Sbjct: 107 -------HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFD 159
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK----IDEKADMYS 663
L +KL + P Y APE+ + + + D++ D++S
Sbjct: 160 LGSGIKLNGDCSPISTPELLTPCGSAE--------YMAPEVVEAFSEEASIYDKRCDLWS 211
Query: 664 LGIVFFEL---WHPF 675
LG++ + L + PF
Sbjct: 212 LGVILYILLSGYPPF 226
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 41/190 (21%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL-KDKSLP--VNDRILREVATLSRLQH 482
+E + +G G F V C N+ G+ +AVK + + K S P + + RE + L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
H+V + + G+ + M G+
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGA---------------------------------- 111
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 600
+ C +++ + + + +A H RQI+E L + H IIHRD+ P+ + ++ +
Sbjct: 112 DLCFEIVKRADAGFV-YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSA 170
Query: 601 -IKIGDFGLA 609
+K+G FG+A
Sbjct: 171 PVKLGGFGVA 180
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 24/165 (14%)
Query: 538 LYIQMEYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
LY+ +EY L E F ++ A +I L H+H +GII+RDL P NI +
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPK 654
+ +K+ DFGL K + D Y APEI G
Sbjct: 156 HQGHVKLTDFGLCK-----ESIHDGTVTHTFCGTIE----------YMAPEILMRSGH-- 198
Query: 655 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP 696
+ D +SLG + +++ PF+ ++ + LK K LPP
Sbjct: 199 -NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 53/211 (25%)
Query: 405 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 464
+P+V S M LP + +E ++ +G G FG L ++K AVK I +K
Sbjct: 3 RPAV---SGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK-- 57
Query: 465 PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 524
+++ + RE+ L+H ++VR+
Sbjct: 58 -IDENVKREIINHRSLRHPNIVRF------------------------------------ 80
Query: 525 DVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQ 581
+E L T+L I MEY + ++FE + F ++ A F+Q++ G+++ H
Sbjct: 81 ----KEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 582 GIIHRDLTPNNIFFDAR--NDIKIGDFGLAK 610
+ HRDL N D +KI FG +K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 112/281 (39%), Gaps = 75/281 (26%)
Query: 408 VDSGSPNMSLPS-------SRYLN--DF-EELQPLGHGGFGHVVLCKNKLDGRHYAVKKI 457
VD G+ N+ S +R LN DF E + LG G FG V +NK A K I
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
Query: 458 RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 517
K + + D ++ E+ L+ H ++V+ A++ +++W F
Sbjct: 71 DTKSEE-ELEDYMV-EIDILASCDHPNIVKLLDAFYYE-------NNLW-----ILIEFC 116
Query: 518 NRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577
A A + E L + + + + +Q ++ L +
Sbjct: 117 AGGAVDAVMLELERPLTESQIQV--------------------------VCKQTLDALNY 150
Query: 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGL-AKFLK-LEQLDQDAAFPXXXXXXXXXXX 635
+H IIHRDL NI F DIK+ DFG+ AK + +++ D P
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTP----------- 199
Query: 636 XXXXXYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL 671
++ APE+ + P D KAD++SLGI E+
Sbjct: 200 ------YWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEM 233
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 77/266 (28%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
+G G +G V + K A KKI + DR +E+ + L H +++R Y+
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 551
FE ++T +Y+ ME C T +
Sbjct: 75 -FE---------------------------------------DNTDIYLVMELC--TGGE 92
Query: 552 VFESYDH---FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DARNDIKIGD 605
+FE H F + A + + ++ +A+ H + HRDL P N F + +K+ D
Sbjct: 93 LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLID 152
Query: 606 FGL-AKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW--PKIDEKADMY 662
FGL A+F + + P +Y +P++ +G P+ DE +
Sbjct: 153 FGLAARFKPGKMMRTKVGTP-----------------YYVSPQVLEGLYGPECDE----W 191
Query: 663 SLGIVFFEL---WHPFSTAMERQIVL 685
S G++ + L + PFS + +++L
Sbjct: 192 SAGVMMYVLLCGYPPFSAPTDXEVML 217
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 112/281 (39%), Gaps = 75/281 (26%)
Query: 408 VDSGSPNMSLPS-------SRYLN--DF-EELQPLGHGGFGHVVLCKNKLDGRHYAVKKI 457
VD G+ N+ S +R LN DF E + LG G FG V +NK A K I
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
Query: 458 RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 517
K + + D ++ E+ L+ H ++V+ A++ +++W F
Sbjct: 71 DTKSEE-ELEDYMV-EIDILASCDHPNIVKLLDAFYYE-------NNLW-----ILIEFC 116
Query: 518 NRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577
A A + E L + + + + +Q ++ L +
Sbjct: 117 AGGAVDAVMLELERPLTESQIQV--------------------------VCKQTLDALNY 150
Query: 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGL-AKFLK-LEQLDQDAAFPXXXXXXXXXXX 635
+H IIHRDL NI F DIK+ DFG+ AK + +++ D P
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP----------- 199
Query: 636 XXXXXYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL 671
++ APE+ + P D KAD++SLGI E+
Sbjct: 200 ------YWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEM 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 24/165 (14%)
Query: 538 LYIQMEYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
LY+ +EY L E F ++ A +I L H+H +GII+RDL P NI +
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPK 654
+ +K+ DFGL K + D Y APEI G
Sbjct: 156 HQGHVKLTDFGLCK-----ESIHDGTVTHXFCGTIE----------YMAPEILMRSGH-- 198
Query: 655 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP 696
+ D +SLG + +++ PF+ ++ + LK K LPP
Sbjct: 199 -NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 77/266 (28%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
+G G +G V + K A KKI + DR +E+ + L H +++R Y+
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 551
FE ++T +Y+ ME C T +
Sbjct: 92 -FE---------------------------------------DNTDIYLVMELC--TGGE 109
Query: 552 VFESYDH---FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DARNDIKIGD 605
+FE H F + A + + ++ +A+ H + HRDL P N F + +K+ D
Sbjct: 110 LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLID 169
Query: 606 FGL-AKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW--PKIDEKADMY 662
FGL A+F + + P +Y +P++ +G P+ DE +
Sbjct: 170 FGLAARFKPGKMMRTKVGTP-----------------YYVSPQVLEGLYGPECDE----W 208
Query: 663 SLGIVFFEL---WHPFSTAMERQIVL 685
S G++ + L + PFS + +++L
Sbjct: 209 SAGVMMYVLLCGYPPFSAPTDXEVML 234
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 112/281 (39%), Gaps = 75/281 (26%)
Query: 408 VDSGSPNMSLPS-------SRYLN--DFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKI 457
VD G+ N+ S +R LN DF E+ LG G FG V +NK A K I
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
Query: 458 RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 517
K + + D ++ E+ L+ H ++V+ A++ +++W F
Sbjct: 71 DTKSEE-ELEDYMV-EIDILASCDHPNIVKLLDAFYYE-------NNLW-----ILIEFC 116
Query: 518 NRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577
A A + E L + + + + +Q ++ L +
Sbjct: 117 AGGAVDAVMLELERPLTESQIQV--------------------------VCKQTLDALNY 150
Query: 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGL-AKFLK-LEQLDQDAAFPXXXXXXXXXXX 635
+H IIHRDL NI F DIK+ DFG+ AK + +++ D P
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTP----------- 199
Query: 636 XXXXXYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL 671
++ APE+ + P D KAD++SLGI E+
Sbjct: 200 ------YWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEM 233
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 90/246 (36%), Gaps = 57/246 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
LG G + V + +G+ YAVK I + ++ R+ REV TL + Q +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKII--EKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR 550
+FE + T Y+ E ++
Sbjct: 79 FFE---------------------------------------DDTRFYLVFEKLQGGSIL 99
Query: 551 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFG 607
+ HF++ A + R + L +H +GI HRDL P NI ++ +KI DF
Sbjct: 100 AHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFD 159
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK----IDEKADMYS 663
L +KL P Y APE+ + + D++ D++S
Sbjct: 160 LGSGMKLNNSCTPITTPELTTPCGSAE--------YMAPEVVEVFTDQATFYDKRCDLWS 211
Query: 664 LGIVFF 669
LG+V +
Sbjct: 212 LGVVLY 217
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 20/152 (13%)
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
L V E D+ +L + QI +G+ ++ + ++HRDL N+ + N +KI DFGL
Sbjct: 127 LEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGL 186
Query: 609 AKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
A+ L+ ++ + +A + A E + K ++D++S G+
Sbjct: 187 ARLLEGDEKEYNA-------------DGGKMPIKWMALECIH-YRKFTHQSDVWSYGVTI 232
Query: 669 FELW----HPFSTAMERQIVLSDLKQKGELPP 696
+EL P+ R+I DL +KGE P
Sbjct: 233 WELMTFGGKPYDGIPTREI--PDLLEKGERLP 262
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 99/262 (37%), Gaps = 66/262 (25%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
DFE ++ +G G FG V + K K R YA+K + + +L+ T + +
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE--------MLKRAETACFREERD 126
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
V+ +GD W + + N +LY+ M+Y
Sbjct: 127 VL-------------VNGDCQWITALHYAFQDEN------------------HLYLVMDY 155
Query: 545 CP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
TL FE D +++A ++V + IH +HRD+ P+N+ D
Sbjct: 156 YVGGDLLTLLSKFE--DKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGH 213
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI----EQGWPKID 656
I++ DFG +++ D Y +PEI E G K
Sbjct: 214 IRLADFG-----SCLKMNDDGTVQSSVAVGTPD---------YISPEILQAMEDGMGKYG 259
Query: 657 EKADMYSLGIVFFELWH---PF 675
+ D +SLG+ +E+ + PF
Sbjct: 260 PECDWWSLGVCMYEMLYGETPF 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 99/262 (37%), Gaps = 66/262 (25%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
DFE ++ +G G FG V + K K R YA+K + + +L+ T + +
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE--------MLKRAETACFREERD 142
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
V+ +GD W + + N +LY+ M+Y
Sbjct: 143 VL-------------VNGDCQWITALHYAFQDEN------------------HLYLVMDY 171
Query: 545 CPR----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
TL FE D +++A ++V + IH +HRD+ P+N+ D
Sbjct: 172 YVGGDLLTLLSKFE--DKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGH 229
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI----EQGWPKID 656
I++ DFG +++ D Y +PEI E G K
Sbjct: 230 IRLADFG-----SCLKMNDDGTVQSSVAVGTPD---------YISPEILQAMEDGMGKYG 275
Query: 657 EKADMYSLGIVFFELWH---PF 675
+ D +SLG+ +E+ + PF
Sbjct: 276 PECDWWSLGVCMYEMLYGETPF 297
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 42/195 (21%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 480
+ FE L+ +G G FG V + + + YA+K + K K + N+ + +E+ + L
Sbjct: 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN-KQKCVERNEVRNVFKELQIMQGL 72
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
+H +V ++W S F + E ++ +
Sbjct: 73 EHPFLV-----------------NLWYS-------FQDE--------------EDMFMVV 94
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+ LR + HF +E ++V L ++ Q IIHRD+ P+NI D
Sbjct: 95 DL-LLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGH 153
Query: 601 IKIGDFGLAKFLKLE 615
+ I DF +A L E
Sbjct: 154 VHITDFNIAAMLPRE 168
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 19/113 (16%)
Query: 563 LAWHLFRQIVEGLAH----IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 618
L+WH+ +I +G A+ +H IHRD+ NI D KI DFGLA+ E+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR--ASEKFA 187
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
Q Y APE +G +I K+D+YS G+V E+
Sbjct: 188 QTVMXSRIVGTTA-----------YMAPEALRG--EITPKSDIYSFGVVLLEI 227
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 30/131 (22%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAAFPX 625
+ R ++E + +H I+HRDL P NI D +IK+ DFG + L E+L + P
Sbjct: 116 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 175
Query: 626 XXXXXXXXXXXXXXXYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL-------WH 673
Y APEI P ++ DM+S G++ + L WH
Sbjct: 176 -----------------YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
Query: 674 PFSTAMERQIV 684
M R I+
Sbjct: 219 RKQMLMLRMIM 229
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 64/256 (25%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR-LQH 482
+D E + LG G +G V ++ G+ AVK+IR S R+L ++ R +
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQE-QKRLLXDLDISXRTVDC 92
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
V +Y A F G +W L ++
Sbjct: 93 PFTVTFYGALFREG-------DVWICXELXDTSLD------------------------- 120
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDI 601
+ +QV + +++ + IV+ L H+H + +IHRD+ P+N+ +A +
Sbjct: 121 ----KFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQV 176
Query: 602 KIGDFGLAKFLKLE-QLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE--- 657
K DFG++ +L + D DA Y AP E+ P++++
Sbjct: 177 KXCDFGISGYLVDDVAKDIDAGCKP-----------------YXAP--ERINPELNQKGY 217
Query: 658 --KADMYSLGIVFFEL 671
K+D++SLGI EL
Sbjct: 218 SVKSDIWSLGITXIEL 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 30/131 (22%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAAFPX 625
+ R ++E + +H I+HRDL P NI D +IK+ DFG + L E+L + P
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 188
Query: 626 XXXXXXXXXXXXXXXYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL-------WH 673
Y APEI P ++ DM+S G++ + L WH
Sbjct: 189 -----------------YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Query: 674 PFSTAMERQIV 684
M R I+
Sbjct: 232 RKQMLMLRMIM 242
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 44/195 (22%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILR-EVATLSRLQHQH 484
++ L+ LG G FG V C K GR + K I + P++ ++ E++ +++L H
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFI---NTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
++ + A+ E+K E + +
Sbjct: 110 LINLHDAF-------------------------------------EDKYEMVLILEFLSG 132
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR--NDIK 602
R E Y + E+ ++ RQ EGL H+H I+H D+ P NI + + + +K
Sbjct: 133 GELFDRIAAEDYKMSEAEVINYM-RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVK 191
Query: 603 IGDFGLAKFLKLEQL 617
I DFGLA L +++
Sbjct: 192 IIDFGLATKLNPDEI 206
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 34/146 (23%)
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF--DARN- 599
E + LRQ F S ++E + LF I + + ++H QG++HRDL P+NI + ++ N
Sbjct: 102 ELLDKILRQKFFS----EREASAVLF-TITKTVEYLHAQGVVHRDLKPSNILYVDESGNP 156
Query: 600 -DIKIGDFGLAKFLKLEQ-LDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI--EQGWPKI 655
I+I DFG AK L+ E L + + APE+ QG+
Sbjct: 157 ESIRICDFGFAKQLRAENGLLXTPCYTAN----------------FVAPEVLERQGY--- 197
Query: 656 DEKADMYSLGIVFFEL---WHPFSTA 678
D D++SLG++ + + PF+
Sbjct: 198 DAACDIWSLGVLLYTXLTGYTPFANG 223
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ +HRDL NI ++ K+ DFGL++F L+ D + P
Sbjct: 140 MLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRF-----LEDDTSDPTY 194
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+TAPE Q + K +D++S GIV +E+ P+ M Q
Sbjct: 195 TSALGGKIPIR-----WTAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYWD-MTNQ 247
Query: 683 IVLSDLKQKGELPP 696
V++ ++Q LPP
Sbjct: 248 DVINAIEQDYRLPP 261
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 100/260 (38%), Gaps = 70/260 (26%)
Query: 419 SSRYLNDFEELQP---LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 475
S ++ D++E++ +G G FG V+CK K + A+K+I + + + E+
Sbjct: 1 GSLHMIDYKEIEVEEVVGRGAFG--VVCKAKWRAKDVAIKQIESESE----RKAFIVELR 54
Query: 476 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 535
LSR+ H ++V+ Y A L A + + E
Sbjct: 55 QLSRVNHPNIVKLYGA------------------CLNPVCLVMEYAEGGSLYNVLHGAEP 96
Query: 536 TYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG---QGIIHRDLTPNN 592
Y ++W L Q +G+A++H + +IHRDL P N
Sbjct: 97 LPYYTAAH------------------AMSWCL--QCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 593 IFFDARNDI-KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
+ A + KI DFG A ++ + + + APE+ +G
Sbjct: 137 LLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA------------------WMAPEVFEG 178
Query: 652 WPKIDEKADMYSLGIVFFEL 671
EK D++S GI+ +E+
Sbjct: 179 -SNYSEKCDVFSWGIILWEV 197
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 19/113 (16%)
Query: 563 LAWHLFRQIVEGLAH----IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 618
L+WH+ +I +G A+ +H IHRD+ NI D KI DFGLA+ E+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR--ASEKFA 187
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
Q Y APE +G +I K+D+YS G+V E+
Sbjct: 188 QTVMXXRIVGTTA-----------YMAPEALRG--EITPKSDIYSFGVVLLEI 227
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 100/259 (38%), Gaps = 70/259 (27%)
Query: 420 SRYLNDFEELQP---LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 476
S ++ D++E++ +G G FG V+CK K + A+K+I + + + E+
Sbjct: 1 SLHMIDYKEIEVEEVVGRGAFG--VVCKAKWRAKDVAIKQIESESE----RKAFIVELRQ 54
Query: 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 536
LSR+ H ++V+ Y A L A + + E
Sbjct: 55 LSRVNHPNIVKLYGA------------------CLNPVCLVMEYAEGGSLYNVLHGAEPL 96
Query: 537 YLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG---QGIIHRDLTPNNI 593
Y ++W L Q +G+A++H + +IHRDL P N+
Sbjct: 97 PYYTAAH------------------AMSWCL--QCSQGVAYLHSMQPKALIHRDLKPPNL 136
Query: 594 FFDARNDI-KIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW 652
A + KI DFG A ++ + + + APE+ +G
Sbjct: 137 LLVAGGTVLKICDFGTACDIQTHMTNNKGSAA------------------WMAPEVFEG- 177
Query: 653 PKIDEKADMYSLGIVFFEL 671
EK D++S GI+ +E+
Sbjct: 178 SNYSEKCDVFSWGIILWEV 196
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 79/208 (37%), Gaps = 44/208 (21%)
Query: 406 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 465
PS D P+ +L + L DF L LG G FG V+L K YA+K ++ KD +
Sbjct: 2 PSEDRKQPSNNLDRVK-LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILK-KDVVIQ 59
Query: 466 VNDR--ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 523
+D + E L+ L + + F+T
Sbjct: 60 DDDVECTMVEKRVLALLDKPPFLTQLHSCFQT---------------------------- 91
Query: 524 ADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582
LY MEY L + F + A +I GL +H +G
Sbjct: 92 -----------VDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 583 IIHRDLTPNNIFFDARNDIKIGDFGLAK 610
II+RDL +N+ D+ IKI DFG+ K
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 72/187 (38%), Gaps = 38/187 (20%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI-LREVATLSRLQH 482
N F + + LG GGFG V C+ + G+ YA KK+ K + + L E L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+ VV A +ET A ++ G L + GQ E+ ++
Sbjct: 244 RFVVSLAYA-YETKDALCLVLTLMNGGDLKFHIYH---------MGQAGFPEARAVFYAA 293
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E C GL +H + I++RDL P NI D I+
Sbjct: 294 EICC---------------------------GLEDLHRERIVYRDLKPENILLDDHGHIR 326
Query: 603 IGDFGLA 609
I D GLA
Sbjct: 327 ISDLGLA 333
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 20/152 (13%)
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
L V E D+ +L + QI +G+ ++ + ++HRDL N+ + N +KI DFGL
Sbjct: 104 LEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGL 163
Query: 609 AKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
A+ L+ ++ + +A + A E + K ++D++S G+
Sbjct: 164 ARLLEGDEKEYNA-------------DGGKMPIKWMALECIH-YRKFTHQSDVWSYGVTI 209
Query: 669 FELW----HPFSTAMERQIVLSDLKQKGELPP 696
+EL P+ R+I DL +KGE P
Sbjct: 210 WELMTFGGKPYDGIPTREI--PDLLEKGERLP 239
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 72/187 (38%), Gaps = 38/187 (20%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI-LREVATLSRLQH 482
N F + + LG GGFG V C+ + G+ YA KK+ K + + L E L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+ VV A +ET A ++ G L + GQ E+ ++
Sbjct: 244 RFVVSLAYA-YETKDALCLVLTLMNGGDLKFHIYH---------MGQAGFPEARAVFYAA 293
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
E C GL +H + I++RDL P NI D I+
Sbjct: 294 EICC---------------------------GLEDLHRERIVYRDLKPENILLDDHGHIR 326
Query: 603 IGDFGLA 609
I D GLA
Sbjct: 327 ISDLGLA 333
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 72/184 (39%), Gaps = 33/184 (17%)
Query: 432 LGHGGFGHVVL--CKN---KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 486
LG G FG V L C N + D AVK LKD S RE L+ LQH+H+V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKT--LKDASDNARKDFHREAELLTNLQHEHIV 78
Query: 487 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 546
++Y E + M G L + F A + + N P
Sbjct: 79 KFYGVCVEGDPLIMVFEYM-KHGDL--NKFLRAHGPDAVLMAEGNP-------------P 122
Query: 547 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 606
L Q H+ +QI G+ ++ Q +HRDL N +KIGDF
Sbjct: 123 TELTQ----------SQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF 172
Query: 607 GLAK 610
G+++
Sbjct: 173 GMSR 176
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 39/195 (20%)
Query: 417 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 476
L S +N+FE L+ LG G FG V+L K K GR+YA+K LK + + D EVA
Sbjct: 1 LGSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI--LKKEVIVAKD----EVA- 53
Query: 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 536
L V++ + F T + + T F A+ ++
Sbjct: 54 -HTLTENRVLQNSRHPFLTALK-------YSFQTHDRLCFVMEYANGGEL---------- 95
Query: 537 YLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFF 595
+ ++ E F ++ A +IV L ++H + +++RDL N+
Sbjct: 96 FFHLSRERV-------------FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 142
Query: 596 DARNDIKIGDFGLAK 610
D IKI DFGL K
Sbjct: 143 DKDGHIKITDFGLCK 157
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 19/113 (16%)
Query: 563 LAWHLFRQIVEGLAH----IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 618
L+WH+ +I +G A+ +H IHRD+ NI D KI DFGLA+ E+
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR--ASEKFA 181
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
Q Y APE +G +I K+D+YS G+V E+
Sbjct: 182 QXVMXXRIVGTTA-----------YMAPEALRG--EITPKSDIYSFGVVLLEI 221
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXX 629
I+ GL +H G++HRDL P NI NDI I DF LA+ +D A
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--------EDTA------- 186
Query: 630 XXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 672
+Y APE+ + + DM+S G V E++
Sbjct: 187 -DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXX 629
I+ GL +H G++HRDL P NI NDI I DF LA+ +D A
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--------EDTA------- 186
Query: 630 XXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 672
+Y APE+ + + DM+S G V E++
Sbjct: 187 -DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|2DMF|A Chain A, An Extended Conformation Of The Rwd Domain Of Human Ring
Finger Protein 25
Length = 137
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 10/137 (7%)
Query: 24 SSSTVDDNELLSEEITALCAIFQEDCKVVSG----SPPQILVKLRPYSKDMGYEDLDVSA 79
S S+ +++ +L E+ L +I+ ++ +V+ G SP +I + L P + + +D
Sbjct: 3 SGSSGEEDWVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAED--QDSQYVC 60
Query: 80 LLLVRCLPG-YPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAA 138
LV +P YP++ P++ I +GL+ +L +L A + G M++ L+E
Sbjct: 61 FTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTAMLYELIEKG 118
Query: 139 QEFLSE-IVPLGQSNES 154
+E L++ +P GQS S
Sbjct: 119 KEILTDNNIPHGQSGPS 135
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 39/189 (20%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+N+FE L+ LG G FG V+L K K GR+YA+K LK + + D EVA L
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI--LKKEVIVAKD----EVA--HTLTE 60
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
V++ + F T + + T F A+ ++ + ++
Sbjct: 61 NRVLQNSRHPFLTALK-------YSFQTHDRLCFVMEYANGGEL----------FFHLSR 103
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDI 601
E F ++ A +IV L ++H + +++RDL N+ D I
Sbjct: 104 ERV-------------FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 150
Query: 602 KIGDFGLAK 610
KI DFGL K
Sbjct: 151 KITDFGLCK 159
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 39/189 (20%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+N+FE L+ LG G FG V+L K K GR+YA+K LK + + D EVA L
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI--LKKEVIVAKD----EVA--HTLTE 59
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
V++ + F T + + T F A+ ++ + ++
Sbjct: 60 NRVLQNSRHPFLTALK-------YSFQTHDRLCFVMEYANGGEL----------FFHLSR 102
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDI 601
E F ++ A +IV L ++H + +++RDL N+ D I
Sbjct: 103 ERV-------------FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 149
Query: 602 KIGDFGLAK 610
KI DFGL K
Sbjct: 150 KITDFGLCK 158
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 33/145 (22%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAAFPX 625
+ R ++E + +H I+HRDL P NI D +IK+ DFG + L E+L P
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPS 188
Query: 626 XXXXXXXXXXXXXXXYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL-------WH 673
Y APEI P ++ DM+S G++ + L WH
Sbjct: 189 -----------------YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Query: 674 PFSTAMERQIVLSDLKQKGELPPSW 698
M R +++S Q G P W
Sbjct: 232 RKQMLMLR-MIMSGNYQFGS--PEW 253
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 568 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQD-AAF 623
F Q++ + ++H GIIHRDL P N+ ++ + IKI DFG +K L L +
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPE--IEQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 678
P Y APE + G + D +SLG++ F + PFS
Sbjct: 180 PT-----------------YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-E 221
Query: 679 MERQIVLSDLKQKGE---LPPSWVAKFSEQ 705
Q+ L D G+ +P W A+ SE+
Sbjct: 222 HRTQVSLKDQITSGKYNFIPEVW-AEVSEK 250
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 568 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQD-AAF 623
F Q++ + ++H GIIHRDL P N+ ++ + IKI DFG +K L L +
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPE--IEQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 678
P Y APE + G + D +SLG++ F + PFS
Sbjct: 180 PT-----------------YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-E 221
Query: 679 MERQIVLSDLKQKGE---LPPSWVAKFSEQ 705
Q+ L D G+ +P W A+ SE+
Sbjct: 222 HRTQVSLKDQITSGKYNFIPEVW-AEVSEK 250
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGLA+ L + D +AA+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVL---EDDPEAAYTTR 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 209 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 257
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 258 DVIKAVDEGYRLPP 271
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 41/186 (22%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
+DFE L+ +G G F V + K K G+ YA+K + D + R + R +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM-------LKRGEVSCFREERD 113
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+V +GD W + F+ + + YLY+ ME
Sbjct: 114 VLV--------------NGDRRW----ITQLHFAFQ--------------DENYLYLVME 141
Query: 544 Y-CPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 601
Y L + + + E+A +IV + +H G +HRD+ P+NI D I
Sbjct: 142 YYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHI 201
Query: 602 KIGDFG 607
++ DFG
Sbjct: 202 RLADFG 207
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 568 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQD-AAF 623
F Q++ + ++H GIIHRDL P N+ ++ + IKI DFG +K L L +
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPE--IEQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 678
P Y APE + G + D +SLG++ F + PFS
Sbjct: 180 PT-----------------YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-E 221
Query: 679 MERQIVLSDLKQKGE---LPPSWVAKFSEQ 705
Q+ L D G+ +P W A+ SE+
Sbjct: 222 HRTQVSLKDQITSGKYNFIPEVW-AEVSEK 250
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 568 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQD-AAF 623
F Q++ + ++H GIIHRDL P N+ ++ + IKI DFG +K L L +
Sbjct: 126 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 185
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPE--IEQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 678
P Y APE + G + D +SLG++ F + PFS
Sbjct: 186 PT-----------------YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-E 227
Query: 679 MERQIVLSDLKQKGE---LPPSWVAKFSEQ 705
Q+ L D G+ +P W A+ SE+
Sbjct: 228 HRTQVSLKDQITSGKYNFIPEVW-AEVSEK 256
>pdb|1UKX|A Chain A, Solution Structure Of The Rwd Domain Of Mouse Gcn2
Length = 137
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 37 EITALCAIF-------QEDCKVVSGSPPQILVKLRPYSKDMGYEDLDVSALLLVRCLPGY 89
E+ AL AI+ + D + PP+I + L Y + + E++ V L V+C P Y
Sbjct: 18 ELQALEAIYGSDFQDLRPDARGRVREPPEINLVL--YPQGLAGEEVYVQVELRVKCPPTY 75
Query: 90 PYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSE 144
P P++ + KGL+ + L L++ A G VMIF L Q FLSE
Sbjct: 76 PDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC--GEVMIFELAHHVQSFLSE 128
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 568 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQD-AAF 623
F Q++ + ++H GIIHRDL P N+ ++ + IKI DFG +K L L +
Sbjct: 119 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 178
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPE--IEQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 678
P Y APE + G + D +SLG++ F + PFS
Sbjct: 179 PT-----------------YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-E 220
Query: 679 MERQIVLSDLKQKGE---LPPSWVAKFSEQ 705
Q+ L D G+ +P W A+ SE+
Sbjct: 221 HRTQVSLKDQITSGKYNFIPEVW-AEVSEK 249
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 171
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L + P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 172 NSLTEPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 213
Query: 672 WHPF 675
+ PF
Sbjct: 214 YPPF 217
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 179
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 180 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 228
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 229 DVIKAVDEGYRLPP 242
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 179
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 180 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 228
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 229 DVIKAVDEGYRLPP 242
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 45/194 (23%)
Query: 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 480
R + DF ++ LG G F V+L ++K + A+K I K+ + E+A L ++
Sbjct: 17 RDIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLHKI 73
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
+H ++V D ++ SG YL +
Sbjct: 74 KHPNIVAL--------------DDIYESGG------------------------HLYLIM 95
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DA 597
Q+ ++ E + +++ A L Q+++ + ++H GI+HRDL P N+ + D
Sbjct: 96 QLVSGGELFDRIVEKGFYTERD-ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 154
Query: 598 RNDIKIGDFGLAKF 611
+ I I DFGL+K
Sbjct: 155 DSKIMISDFGLSKM 168
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 223
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 224 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 265
Query: 672 WHPF 675
+ PF
Sbjct: 266 YPPF 269
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 218 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 259
Query: 672 WHPF 675
+ PF
Sbjct: 260 YPPF 263
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 19/113 (16%)
Query: 563 LAWHLFRQIVEGLAH----IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 618
L+WH +I +G A+ +H IHRD+ NI D KI DFGLA+ E+
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR--ASEKFA 178
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
Q Y APE +G +I K+D+YS G+V E+
Sbjct: 179 QXVXXSRIVGTTA-----------YXAPEALRG--EITPKSDIYSFGVVLLEI 218
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 140 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 196
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 197 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 245
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 246 DVIKAVDEGYRLPP 259
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 509 GTLASSTFSNRAASSADVTGQENKLESTY--------LYIQMEYCPRTLRQVFESYDHFD 560
GT++ F A T Q +KL Y +YI EY + F D
Sbjct: 48 GTMSVQAFLEEANLMK--TLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGG 105
Query: 561 KELAWHLF---RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQL 617
K L L QI EG+A+I + IHRDL N+ KI DFGLA+ ++ +
Sbjct: 106 KVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 165
Query: 618 D--QDAAFPXXXXXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+ A FP +TAPE I G I K+D++S GI+ +E+
Sbjct: 166 TAREGAKFPIK----------------WTAPEAINFGCFTI--KSDVWSFGILLYEI 204
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 45/194 (23%)
Query: 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 480
R + DF ++ LG G F V+L ++K + A+K I K+ + E+A L ++
Sbjct: 17 RDIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLHKI 73
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
+H ++V D ++ SG YL +
Sbjct: 74 KHPNIVAL--------------DDIYESGG------------------------HLYLIM 95
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DA 597
Q+ ++ E + +++ A L Q+++ + ++H GI+HRDL P N+ + D
Sbjct: 96 QLVSGGELFDRIVEKGFYTERD-ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 154
Query: 598 RNDIKIGDFGLAKF 611
+ I I DFGL+K
Sbjct: 155 DSKIMISDFGLSKM 168
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 152 MLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 209 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 257
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 258 DVIKAVDEGYRLPP 271
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 4 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 62
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 63 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 93
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L +Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 94 ----------LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 143
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 144 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 20/108 (18%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXX 628
+Q ++ L ++H IIHRDL NI F DIK+ DFG++ + + +F
Sbjct: 115 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF----- 169
Query: 629 XXXXXXXXXXXXYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL 671
++ APE+ + P D KAD++SLGI E+
Sbjct: 170 ---------IGTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEM 207
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 568 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQD-AAF 623
F Q++ + ++H GIIHRDL P N+ ++ + IKI DFG +K L L +
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 318
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPE--IEQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 678
P Y APE + G + D +SLG++ F + PFS
Sbjct: 319 PT-----------------YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-E 360
Query: 679 MERQIVLSDLKQKGE---LPPSWVAKFSEQ 705
Q+ L D G+ +P W A+ SE+
Sbjct: 361 HRTQVSLKDQITSGKYNFIPEVW-AEVSEK 389
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 103/263 (39%), Gaps = 65/263 (24%)
Query: 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
L+ LG G FG V L K K Y V +K+ S+ D +E T+ +L H +V++
Sbjct: 13 LKELGSGQFGVVKLGKWK---GQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKF 68
Query: 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 548
Y GV + + +++ N S LE + L +E C
Sbjct: 69 Y------GVCSKEYPIYIVTEYISNGCLLNYLRSHG------KGLEPSQL---LEMC--- 110
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
YD + EG+A + IHRDL N D +K+ DFG+
Sbjct: 111 -------YD-------------VCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGM 150
Query: 609 AKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGI 666
+++ +Q FP ++APE+ + K K+D+++ GI
Sbjct: 151 TRYVLDDQYVSSVGTKFPVK----------------WSAPEVFH-YFKYSSKSDVWAFGI 193
Query: 667 VFFELWH----PFSTAMERQIVL 685
+ +E++ P+ ++VL
Sbjct: 194 LMWEVFSLGKMPYDLYTNSEVVL 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 108/272 (39%), Gaps = 65/272 (23%)
Query: 408 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSL 464
VD G+ N+ S + +E + LG G F V C+ K G+ YA +KK RL
Sbjct: 11 VDLGTENLYF-QSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRR 69
Query: 465 PVN-DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 523
V+ + I REV L ++H +++ + +
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIF------------------------------- 98
Query: 524 ADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583
ENK + L +++ L + ++ A +QI++G+ ++H + I
Sbjct: 99 ------ENKTD-VVLILEL-VSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI 150
Query: 584 IHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXX 639
H DL P NI +N IK+ DFG+A +++ F
Sbjct: 151 AHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKIEAGNEFKNIFGTPE-------- 197
Query: 640 XYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+ APEI P + +ADM+S+G++ + L
Sbjct: 198 ---FVAPEIVNYEP-LGLEADMWSIGVITYIL 225
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 45/194 (23%)
Query: 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 480
R + DF ++ LG G F V+L ++K + A+K I K+ + E+A L ++
Sbjct: 17 RDIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLHKI 73
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
+H ++V D ++ SG YL +
Sbjct: 74 KHPNIVAL--------------DDIYESGG------------------------HLYLIM 95
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DA 597
Q+ ++ E + +++ A L Q+++ + ++H GI+HRDL P N+ + D
Sbjct: 96 QLVSGGELFDRIVEKGFYTERD-ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 154
Query: 598 RNDIKIGDFGLAKF 611
+ I I DFGL+K
Sbjct: 155 DSKIMISDFGLSKM 168
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 47/195 (24%)
Query: 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILR-EVATLSR 479
R + DF ++ LG G F V+L ++K + A+K I K+L + + E+A L +
Sbjct: 17 RDIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCI--AKKALEGKEGSMENEIAVLHK 72
Query: 480 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
++H ++V D ++ SG YL
Sbjct: 73 IKHPNIVAL--------------DDIYESGG------------------------HLYLI 94
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---D 596
+Q+ ++ E + +++ A L Q+++ + ++H GI+HRDL P N+ + D
Sbjct: 95 MQLVSGGELFDRIVEKGFYTERD-ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD 153
Query: 597 ARNDIKIGDFGLAKF 611
+ I I DFGL+K
Sbjct: 154 EDSKIMISDFGLSKM 168
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 171
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 172 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 213
Query: 672 WHPF 675
+ PF
Sbjct: 214 YPPF 217
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 173
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 174 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 215
Query: 672 WHPF 675
+ PF
Sbjct: 216 YPPF 219
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 49/220 (22%)
Query: 411 GSPNMSLPSSRYL-----NDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKD 461
GSP+ P+ L +F++++ LG G FG V +G A+K++R +
Sbjct: 1 GSPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EA 59
Query: 462 KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 521
S N IL E ++ + + HV R G +ST
Sbjct: 60 TSPKANKEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---- 96
Query: 522 SSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581
L +Q+ L V E D+ + + QI +G+ ++ +
Sbjct: 97 ----------------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
++HRDL N+ +KI DFGLAK L E+ + A
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 209 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 257
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 258 DVIKAVDEGYRLPP 271
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 568 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQD-AAF 623
F Q++ + ++H GIIHRDL P N+ ++ + IKI DFG +K L L +
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 304
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPE--IEQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 678
P Y APE + G + D +SLG++ F + PFS
Sbjct: 305 PT-----------------YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-E 346
Query: 679 MERQIVLSDLKQKGE---LPPSWVAKFSEQ 705
Q+ L D G+ +P W A+ SE+
Sbjct: 347 HRTQVSLKDQITSGKYNFIPEVW-AEVSEK 375
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 209 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 257
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 258 DVIKAVDEGYRLPP 271
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 209 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 257
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 258 DVIKAVDEGYRLPP 271
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 209 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 257
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 258 DVIKAVDEGYRLPP 271
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 150 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 206
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 207 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 255
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 256 DVIKAVDEGYRLPP 269
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ +HRDL NI ++ K+ DFGL++F LE+ D +
Sbjct: 121 MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF--LEENSSDPTYTSS 178
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+TAPE + K +D +S GIV +E+ P+ M Q
Sbjct: 179 LGGKIPIR--------WTAPE-AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD-MSNQ 228
Query: 683 IVLSDLKQKGELPP 696
V++ ++Q LPP
Sbjct: 229 DVINAIEQDYRLPP 242
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI A KI DFGLA+ ++ + + A FP
Sbjct: 292 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK- 350
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 351 ---------------WTAPEAINFGSFTI--KSDVWSFGILLMEI 378
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 113 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 172
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 173 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 214
Query: 672 WHPF 675
+ PF
Sbjct: 215 YPPF 218
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 152 MLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 209 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 257
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 258 DVIKAVDEGYRLPP 271
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 173
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 174 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 215
Query: 672 WHPF 675
+ PF
Sbjct: 216 YPPF 219
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 187
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 188 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 229
Query: 672 WHPF 675
+ PF
Sbjct: 230 YPPF 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 179
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 180 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 221
Query: 672 WHPF 675
+ PF
Sbjct: 222 YPPF 225
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 209 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 257
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 258 DVIKAVDEGYRLPP 271
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 86/221 (38%), Gaps = 43/221 (19%)
Query: 405 KPSVDSG-SPNMSLPSSRYLNDFEELQPLGHGGFGHVV--LCKNKLDGRHYAVKKIRLKD 461
+P SG +PN +L +F++++ LG G FG V L + + V + L++
Sbjct: 29 EPLTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELRE 88
Query: 462 KSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 520
+ P N IL E ++ + + HV R G +ST
Sbjct: 89 ATSPKANKEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ--- 126
Query: 521 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580
L Q+ L V E D+ + + QI +G+ ++
Sbjct: 127 -----------------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
+ ++HRDL N+ +KI DFGLAK L E+ + A
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 178
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 179 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 220
Query: 672 WHPF 675
+ PF
Sbjct: 221 YPPF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 177
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ DM+SLG++ + L
Sbjct: 178 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 219
Query: 672 WHPF 675
+ PF
Sbjct: 220 YPPF 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 63
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 64 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 94
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L +Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 95 ----------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ +HR L NI ++ K+ DFGL++F L+ D + P
Sbjct: 114 MLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRF-----LEDDTSDPTY 168
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+TAPE Q + K +D++S GIV +E+ P+ M Q
Sbjct: 169 TSALGGKIPIR-----WTAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYWD-MTNQ 221
Query: 683 IVLSDLKQKGELPP 696
V++ ++Q LPP
Sbjct: 222 DVINAIEQDYRLPP 235
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 61
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 62 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 92
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L +Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 93 ----------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 64
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 65 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 95
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L +Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 96 ----------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 145
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 4 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 62
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 63 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 93
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L +Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 94 ----------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 143
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 144 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI A KI DFGLA+ ++ + + A FP
Sbjct: 119 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK- 177
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 178 ---------------WTAPEAINFGSFTI--KSDVWSFGILLMEI 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL + L + D +AA+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL---EDDPEAAYTTR 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+T+PE + K +D++S GIV +E+ P+ M Q
Sbjct: 209 GGKIPIR---------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSNQ 257
Query: 683 IVLSDLKQKGELPP 696
V+ + + LPP
Sbjct: 258 DVIKAVDEGYRLPP 271
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 98/262 (37%), Gaps = 66/262 (25%)
Query: 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 484
DFE L+ +G G FG V AV K++ DK + +IL + L R +
Sbjct: 75 DFEILKVIGRGAFGEV------------AVVKLKNADKVFAM--KILNKWEMLKRAETA- 119
Query: 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 544
+ E +GDS W + + N LY+ M+Y
Sbjct: 120 ------CFREERDVLVNGDSKWITTLHYAFQDDNN------------------LYLVMDY 155
Query: 545 CPR----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
TL FE D +E+A ++V + +H +HRD+ P+NI D
Sbjct: 156 YVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH 213
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI----EQGWPKID 656
I++ DFG +L +D Y +PEI E G +
Sbjct: 214 IRLADFG-----SCLKLMEDGTVQSSVAVGTPD---------YISPEILQAMEGGKGRYG 259
Query: 657 EKADMYSLGIVFFELWH---PF 675
+ D +SLG+ +E+ + PF
Sbjct: 260 PECDWWSLGVCMYEMLYGETPF 281
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 61
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 62 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 92
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 93 ----------LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ +HRDL NI ++ K+ DFGL++F L+++++ P
Sbjct: 123 MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF-----LEENSSDPTE 177
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+TAPE + K +D +S GIV +E+ P+ M Q
Sbjct: 178 TSSLGGKIPIR-----WTAPE-AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD-MSNQ 230
Query: 683 IVLSDLKQKGELPP 696
V++ ++Q LPP
Sbjct: 231 DVINAIEQDYRLPP 244
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 120/321 (37%), Gaps = 99/321 (30%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L++ + L+ +G G +G V K LD R AVK ++ +N++ + V + +H
Sbjct: 12 LDNLKLLELIGRGRYGAVY--KGSLDERPVAVKVFSFANRQNFINEKNIYRVPLM---EH 66
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++ R+ GD + + ++E YL + M
Sbjct: 67 DNIARF-----------IVGD---------------------ERVTADGRME--YLLV-M 91
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ---------GIIHRDLTPNNI 593
EY P + S D + L + GLA++H + I HRDL N+
Sbjct: 92 EYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV 151
Query: 594 FFDARNDIKIGDFGLAKFLKLEQL-----DQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI 648
I DFGL+ L +L + +AA Y APE+
Sbjct: 152 LVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR------------YMAPEV 199
Query: 649 EQGWPKIDE------KADMYSLGIVFFELW-------------------------HPFST 677
+G + + + DMY+LG++++E++ HP T
Sbjct: 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHP--T 257
Query: 678 AMERQIVLSDLKQKGELPPSW 698
+ Q+++S KQ+ + P +W
Sbjct: 258 FEDMQVLVSREKQRPKFPEAW 278
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 9 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 67
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 68 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 98
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 99 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 148
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 149 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 61
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 62 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 92
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 93 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 64
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 65 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 95
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 96 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 145
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 64
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 65 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 95
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 96 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 145
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 63
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 64 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 94
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 95 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 61
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 62 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 92
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 93 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 64
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 65 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 95
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 96 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 145
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 24 KPLGRGAFGQVI------EADAFGIDKT---ATCRTVAVKMLKEGATHS--EHRALMSEL 72
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L T F S + + N+ ++ +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNE------FVPYKV 126
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 127 APEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 182 DFGLAR 187
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 10 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 68
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 69 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 99
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 100 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 149
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 26/114 (22%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLK-----LEQL 617
L QI++G+ ++H ++HRDL P NI R +KI D G A+ L L
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 618 DQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
D ++Y APE+ G + D++++G +F EL
Sbjct: 193 DP-----------------VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 24 KPLGRGAFGQVI------EADAFGIDKTA---TCRTVAVKMLKEGATHS--EHRALMSEL 72
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L T F S + + N+ ++ +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNE------FVPYKV 126
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 127 APEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 182 DFGLAR 187
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 28 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 86
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 87 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 117
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 118 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 167
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 168 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 24 KPLGRGAFGQVI------EADAFGIDKT---ATCRTVAVKMLKEGATHS--EHRALMSEL 72
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L T F S + + N+ ++ +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNE------FVPYKV 126
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 127 APEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 182 DFGLAR 187
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXX 633
GL ++H + IIHRD+ NI D KI DFG++K K +LDQ
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELDQ-----------THL 197
Query: 634 XXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
Y PE +G ++ EK+D+YS G+V FE+
Sbjct: 198 XXVVKGTLGYIDPEYFIKG--RLTEKSDVYSFGVVLFEV 234
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 91/249 (36%), Gaps = 64/249 (25%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + +G G G V + G+ A++++ L+ + P + I+ E+ + ++ ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNI 79
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
V Y ++ GD +W + MEY
Sbjct: 80 VNYLDSYLV-------GDELW---------------------------------VVMEYL 99
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ D+ + R+ ++ L +H +IHRD+ +NI +K+ D
Sbjct: 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTD 159
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI---EQGWPKIDEKADMY 662
FG + EQ + ++ APE+ + PK+ D++
Sbjct: 160 FGFCAQITPEQSKRSTMVGTP---------------YWMAPEVVTRKAYGPKV----DIW 200
Query: 663 SLGIVFFEL 671
SLGI+ E+
Sbjct: 201 SLGIMAIEM 209
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 13 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 71
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 72 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 102
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 103 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 152
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 153 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK- 180
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 181 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 208
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 65/280 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYY 489
LG G +G V ++ + A+K+I +D S P+++ E+A L+H+++V+Y
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE----EIALHKHLKHKNIVQYL 85
Query: 490 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 549
++ E G + + G G+L++ L
Sbjct: 86 GSFSENGFIKIFMEQVPG-GSLSA----------------------------------LL 110
Query: 550 RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI-KIGDFGL 608
R + ++ + ++ +QI+EGL ++H I+HRD+ +N+ + + + KI DFG
Sbjct: 111 RSKWGPLKDNEQTIGFYT-KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT 169
Query: 609 AKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK-IDEKADMYSLGIV 667
+K L P Y APEI P+ + AD++SLG
Sbjct: 170 SKRLA-------GINPCTETFTGTLQ--------YMAPEIIDKGPRGYGKAADIWSLGCT 214
Query: 668 FFELWH---PFSTAMERQIVLSDL---KQKGELPPSWVAK 701
E+ PF E Q + + K E+P S A+
Sbjct: 215 IIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAE 254
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK- 181
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 182 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 209
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 176
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 177 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 204
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK- 175
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 176 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 203
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 346
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 347 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 374
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 112 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK- 170
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 171 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 198
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 177
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 178 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 175
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 176 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 346
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 347 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 374
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 346
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 347 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 374
>pdb|2DAY|A Chain A, Solution Structure Of The Rwd Domain Of Human Ring Finger
Protein 25
Length = 128
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 24 SSSTVDDNELLSEEITALCAIFQEDCKVVSG----SPPQILVKLRPYSKDMGYEDLDVSA 79
S S+ +++ +L E+ L +I+ ++ +V+ G SP +I + L P + + +D
Sbjct: 3 SGSSGEEDWVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAED--QDSQYVC 60
Query: 80 LLLVRCLPG-YPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAA 138
LV +P YP++ P++ I +GL+ +L +L A + G M++ L+E
Sbjct: 61 FTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTAMLYELIEKG 118
Query: 139 QEFLS 143
+E LS
Sbjct: 119 KEILS 123
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 41/190 (21%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR--ILREVATLSRL 480
+++FE ++ LG G FG V+L + K G YAVK ++ KD L +D + E LS
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK-KDVILQDDDVECTMTEKRILSLA 80
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
++ + F+T D ++ F + D+
Sbjct: 81 RNHPFLTQLFCCFQTP------DRLF---------FVMEFVNGGDL-------------- 111
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
M + ++ R FD+ A +I+ L +H +GII+RDL +N+ D
Sbjct: 112 -MFHIQKSRR--------FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGH 162
Query: 601 IKIGDFGLAK 610
K+ DFG+ K
Sbjct: 163 CKLADFGMCK 172
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 23/121 (19%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 429
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQI 683
+TAPE + + K+D++S GI+ EL P+ + R++
Sbjct: 430 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 473
Query: 684 V 684
+
Sbjct: 474 L 474
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 183
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 184 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 211
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 181
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 182 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 175
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 176 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 203
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 91/249 (36%), Gaps = 64/249 (25%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + +G G G V + G+ A++++ L+ + P + I+ E+ + ++ ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNI 79
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
V Y ++ GD +W + MEY
Sbjct: 80 VNYLDSYLV-------GDELW---------------------------------VVMEYL 99
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ D+ + R+ ++ L +H +IHRD+ +NI +K+ D
Sbjct: 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTD 159
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI---EQGWPKIDEKADMY 662
FG + EQ + ++ APE+ + PK+ D++
Sbjct: 160 FGFCAQITPEQSKRSXMVGTP---------------YWMAPEVVTRKAYGPKV----DIW 200
Query: 663 SLGIVFFEL 671
SLGI+ E+
Sbjct: 201 SLGIMAIEM 209
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A+I + IHRDL N+ KI DFGLA+ ++ + + A FP
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK- 175
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K++++S GI+ +E+
Sbjct: 176 ---------------WTAPEAINFGCFTI--KSNVWSFGILLYEI 203
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK- 185
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 186 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 181 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 208
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 209
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 109 EELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 162
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 72/184 (39%), Gaps = 31/184 (16%)
Query: 432 LGHGGFGHVVL--CKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 486
LG G FG V L C N L D AVK LK+ S RE L+ LQHQH+V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTMLQHQHIV 83
Query: 487 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 546
R++ E + M G L + + + + G E+ P
Sbjct: 84 RFFGVCTEGRPLLMVFEYM-RHGDL-NRFLRSHGPDAKLLAGGEDVAPG----------P 131
Query: 547 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 606
L Q+ + Q+ G+ ++ G +HRDL N +KIGDF
Sbjct: 132 LGLGQLLA------------VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF 179
Query: 607 GLAK 610
G+++
Sbjct: 180 GMSR 183
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 91/249 (36%), Gaps = 64/249 (25%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + +G G G V + G+ A++++ L+ + P + I+ E+ + ++ ++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNI 80
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
V Y ++ GD +W + MEY
Sbjct: 81 VNYLDSYLV-------GDELW---------------------------------VVMEYL 100
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ D+ + R+ ++ L +H +IHRD+ +NI +K+ D
Sbjct: 101 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTD 160
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI---EQGWPKIDEKADMY 662
FG + EQ + ++ APE+ + PK+ D++
Sbjct: 161 FGFCAQITPEQSKRSXMVGTP---------------YWMAPEVVTRKAYGPKV----DIW 201
Query: 663 SLGIVFFEL 671
SLGI+ E+
Sbjct: 202 SLGIMAIEM 210
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 38/146 (26%)
Query: 563 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA 622
L W + QI +G++++ ++HRDL N+ + N +KI DFGLA+ L +++ +
Sbjct: 122 LNWCM--QIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE---- 175
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE--------KADMYSLGIVFFELW-- 672
Y ++ W ++ ++D++S G+ +EL
Sbjct: 176 ------------------YHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTF 217
Query: 673 --HPFSTAMERQIVLSDLKQKGELPP 696
P+ R+I DL +KGE P
Sbjct: 218 GAKPYDGIPAREI--PDLLEKGERLP 241
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 184
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 185 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 212
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 113 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 166
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 195
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 77/202 (38%), Gaps = 44/202 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSR 479
+F++++ LG G FG V +G A+K++R + S N IL E ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMAS 70
Query: 480 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
+ + HV R G +ST L
Sbjct: 71 VDNPHVCRLL-------------------GICLTSTVQ--------------------LI 91
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
Q+ L V E D+ + + QI EG+ ++ + ++HRDL N+
Sbjct: 92 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQ 151
Query: 600 DIKIGDFGLAKFLKLEQLDQDA 621
+KI DFGLAK L E+ + A
Sbjct: 152 HVKITDFGLAKLLGAEEKEYHA 173
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHRDL NI KI DFGLA+ ++ + + A FP
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK- 175
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 176 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 203
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 195
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 194
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 167
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 167
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 209
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 167
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 182
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 91/249 (36%), Gaps = 64/249 (25%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + +G G G V + G+ A++++ L+ + P + I+ E+ + ++ ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNI 79
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
V Y ++ GD +W + MEY
Sbjct: 80 VNYLDSYLV-------GDELW---------------------------------VVMEYL 99
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ D+ + R+ ++ L +H +IHRD+ +NI +K+ D
Sbjct: 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTD 159
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI---EQGWPKIDEKADMY 662
FG + EQ + ++ APE+ + PK+ D++
Sbjct: 160 FGFCAQITPEQSKRSEMVGTP---------------YWMAPEVVTRKAYGPKV----DIW 200
Query: 663 SLGIVFFEL 671
SLGI+ E+
Sbjct: 201 SLGIMAIEM 209
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 181
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 209
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 194
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 195
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 195
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 194
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 113 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 166
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 194
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 148 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 201
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 564 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 613
A F+ +++G+ ++H Q IIHRD+ P+N+ IKI DFG++ K
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 181
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 159 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 214
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 182
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 182
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 72/184 (39%), Gaps = 31/184 (16%)
Query: 432 LGHGGFGHVVL--CKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 486
LG G FG V L C N L D AVK LK+ S RE L+ LQHQH+V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTMLQHQHIV 77
Query: 487 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 546
R++ E + M G L + + + + G E+ P
Sbjct: 78 RFFGVCTEGRPLLMVFEYM-RHGDL-NRFLRSHGPDAKLLAGGEDVAPG----------P 125
Query: 547 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 606
L Q+ + Q+ G+ ++ G +HRDL N +KIGDF
Sbjct: 126 LGLGQLLA------------VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF 173
Query: 607 GLAK 610
G+++
Sbjct: 174 GMSR 177
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 112 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 165
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 173
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 174 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 201
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 46/103 (44%), Gaps = 27/103 (26%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXX 629
QI EG+A I + IHRDL NI A KI DFGLA+ A FP
Sbjct: 286 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV--------GAKFPIK--- 334
Query: 630 XXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 335 -------------WTAPEAINFGSFTI--KSDVWSFGILLMEI 362
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 92/246 (37%), Gaps = 61/246 (24%)
Query: 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
+Q +G G FG V L L+ A+K I+ S D + E + +L H +V+
Sbjct: 32 VQEIGSGQFGLVHL-GYWLNKDKVAIKTIKEGSMS---EDDFIEEAEVMMKLSHPKLVQL 87
Query: 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 548
Y E +A E+ S YL RT
Sbjct: 88 YGVCLE------------------------QAPICLVFEFMEHGCLSDYL--------RT 115
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
R +F + E + + EG+A++ +IHRDL N IK+ DFG+
Sbjct: 116 QRGLFAA------ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 169
Query: 609 AKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGI 666
+F+ +Q FP + +PE+ + + K+D++S G+
Sbjct: 170 TRFVLDDQYTSSTGTKFPVK----------------WASPEV-FSFSRYSSKSDVWSFGV 212
Query: 667 VFFELW 672
+ +E++
Sbjct: 213 LMWEVF 218
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK- 170
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 171 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 198
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 136 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 189
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 109 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 162
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 177
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 178 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 205
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 181 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 208
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 169
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 170 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 197
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 181 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 208
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 181 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 208
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 181 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 33 KPLGRGAFGQVI------EADAFGIDKTA---TCRTVAVKMLKEGATHS--EHRALMSEL 81
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L F S + + N+ ++ +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE------FVPYKV 135
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 136 APEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 191 DFGLAR 196
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 65/258 (25%)
Query: 423 LNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP----VNDRILREVATL 477
+ DF ++ + LG G F V C+ K G YA K I+ + + I REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69
Query: 478 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
++ H +++ + + EN+ +
Sbjct: 70 RQVLHPNIITLHDVY-------------------------------------ENRTD-VV 91
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
L +++ L + +E A +QI++G+ ++H + I H DL P NI
Sbjct: 92 LILEL-VSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 598 RN----DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
+N IK+ DFGLA +++ F + APEI P
Sbjct: 151 KNIPIPHIKLIDFGLA-----HEIEDGVEFKNIFGTPE-----------FVAPEIVNYEP 194
Query: 654 KIDEKADMYSLGIVFFEL 671
+ +ADM+S+G++ + L
Sbjct: 195 -LGLEADMWSIGVITYIL 211
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 171
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 172 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 199
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK- 177
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 178 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 205
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLK 613
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG LK
Sbjct: 109 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 162
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 64/254 (25%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQ 481
+E + LG G F V C+ K G+ YA +KK RL V+ + I REV L ++
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++ + + ENK + L ++
Sbjct: 67 HPNIITLHDIF-------------------------------------ENKTD-VVLILE 88
Query: 542 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-- 599
+ L + ++ A +QI++G+ ++H + I H DL P NI +N
Sbjct: 89 L-VSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 147
Query: 600 --DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE 657
IK+ DFG+A +++ F + APEI P +
Sbjct: 148 NPRIKLIDFGIA-----HKIEAGNEFKNIFGTPE-----------FVAPEIVNYEP-LGL 190
Query: 658 KADMYSLGIVFFEL 671
+ADM+S+G++ + L
Sbjct: 191 EADMWSIGVITYIL 204
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 72/184 (39%), Gaps = 31/184 (16%)
Query: 432 LGHGGFGHVVL--CKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 486
LG G FG V L C N L D AVK LK+ S RE L+ LQHQH+V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTMLQHQHIV 106
Query: 487 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 546
R++ E + M G L + + + + G E+ P
Sbjct: 107 RFFGVCTEGRPLLMVFEYM-RHGDL-NRFLRSHGPDAKLLAGGEDVAPG----------P 154
Query: 547 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 606
L Q+ + Q+ G+ ++ G +HRDL N +KIGDF
Sbjct: 155 LGLGQLLA------------VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF 202
Query: 607 GLAK 610
G+++
Sbjct: 203 GMSR 206
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 65/258 (25%)
Query: 423 LNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP----VNDRILREVATL 477
+ DF ++ + LG G F V C+ K G YA K I+ + + I REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 478 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
++ H +V+ + + EN+ +
Sbjct: 70 RQVLHHNVITLHDVY-------------------------------------ENRTD-VV 91
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
L +++ L + +E A +QI++G+ ++H + I H DL P NI
Sbjct: 92 LILEL-VSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 598 RN----DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
+N IK+ DFGLA +++ F + APEI P
Sbjct: 151 KNIPIPHIKLIDFGLA-----HEIEDGVEFKNIFGTPE-----------FVAPEIVNYEP 194
Query: 654 KIDEKADMYSLGIVFFEL 671
+ +ADM+S+G++ + L
Sbjct: 195 -LGLEADMWSIGVITYIL 211
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 65/258 (25%)
Query: 423 LNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP----VNDRILREVATL 477
+ DF ++ + LG G F V C+ K G YA K I+ + + I REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 478 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
++ H +V+ + + EN+ +
Sbjct: 70 RQVLHHNVITLHDVY-------------------------------------ENRTD-VV 91
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
L +++ L + +E A +QI++G+ ++H + I H DL P NI
Sbjct: 92 LILEL-VSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 598 RN----DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
+N IK+ DFGLA +++ F + APEI P
Sbjct: 151 KNIPIPHIKLIDFGLA-----HEIEDGVEFKNIFGTPE-----------FVAPEIVNYEP 194
Query: 654 KIDEKADMYSLGIVFFEL 671
+ +ADM+S+G++ + L
Sbjct: 195 -LGLEADMWSIGVITYIL 211
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 33 KPLGRGAFGQVI------EADAFGIDKTA---TCRTVAVKMLKEGATHS--EHRALMSEL 81
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L F S + + N+ ++ +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE------FVPYKV 135
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 136 APEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 191 DFGLAR 196
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 181 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 208
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 65/258 (25%)
Query: 423 LNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP----VNDRILREVATL 477
+ DF ++ + LG G F V C+ K G YA K I+ + + I REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 478 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
++ H +V+ + + EN+ +
Sbjct: 70 RQVLHHNVITLHDVY-------------------------------------ENRTD-VV 91
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
L +++ L + +E A +QI++G+ ++H + I H DL P NI
Sbjct: 92 LILEL-VSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 598 RN----DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
+N IK+ DFGLA +++ F + APEI P
Sbjct: 151 KNIPIPHIKLIDFGLA-----HEIEDGVEFKNIFGTPE-----------FVAPEIVNYEP 194
Query: 654 KIDEKADMYSLGIVFFEL 671
+ +ADM+S+G++ + L
Sbjct: 195 -LGLEADMWSIGVITYIL 211
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 92/255 (36%), Gaps = 71/255 (27%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ + + LQ +G G FG V+L + G AVK I K+ L E + +++L+H
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRH 73
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ E E LYI
Sbjct: 74 SNLVQLLGVIVE---------------------------------------EKGGLYIVT 94
Query: 543 EYCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
EY + LR S D L + L + E + ++ G +HRDL N+
Sbjct: 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGNNFVHRDLAARNVLVSE 152
Query: 598 RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE 657
N K+ DFGL K + P +TAPE + K
Sbjct: 153 DNVAKVSDFGLTK--EASSTQDTGKLPVK----------------WTAPEALRE-KKFST 193
Query: 658 KADMYSLGIVFFELW 672
K+D++S GI+ +E++
Sbjct: 194 KSDVWSFGILLWEIY 208
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 181 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 208
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 86/226 (38%), Gaps = 62/226 (27%)
Query: 459 LKDKSLPVNDR--ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 516
L+D+ L ++R E L LQH ++VR+Y +W T
Sbjct: 59 LQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWEST--------------------- 97
Query: 517 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576
V G++ + T L TL+ + + ++ RQI++GL
Sbjct: 98 ---------VKGKKCIVLVTELXTSG-----TLKTYLKRFKVXKIKVLRSWCRQILKGLQ 143
Query: 577 HIHGQG--IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXX 633
+H + IIHRDL +NIF +KIGD GLA + A+F
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR-------ASFAKAVIGTPE- 195
Query: 634 XXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFS 676
+ APE + K DE D+Y+ G E +P+S
Sbjct: 196 ---------FXAPEXYE--EKYDESVDVYAFGXCXLEXATSEYPYS 230
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK- 180
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 181 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 102/277 (36%), Gaps = 67/277 (24%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 470
G + SLP+ + +E + LG GGFG+V+ ++ G A+K+ R ++ S +R
Sbjct: 3 GGRSPSLPT-QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERW 60
Query: 471 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 530
E+ + +L H +VV S+ +V
Sbjct: 61 CLEIQIMKKLNHPNVV-----------------------------------SAREVPDGL 85
Query: 531 NKLESTYL-YIQMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585
KL L + MEYC R FE+ + L I L ++H IIH
Sbjct: 86 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIH 145
Query: 586 RDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYF 642
RDL P NI R KI D G AK +LDQ
Sbjct: 146 RDLKPENIVLQPGPQRLIHKIIDLGYAK-----ELDQGELCTEFVGTLQ----------- 189
Query: 643 YTAPE-IEQGWPKIDEKADMYSLGIVFFEL---WHPF 675
Y APE +EQ K D +S G + FE + PF
Sbjct: 190 YLAPELLEQK--KYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 70 KPLGRGAFGQVI------EADAFGIDKTA---TCRTVAVKMLKEGATHS--EHRALMSEL 118
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L F S + + N+ ++ +
Sbjct: 119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE------FVPYKV 172
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 173 APEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 227
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 228 DFGLAR 233
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 33 KPLGRGAFGQVI------EADAFGIDKTA---TCRTVAVKMLKEGATHS--EHRALMSEL 81
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L F S + + N+ ++ +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE------FVPYKV 135
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 136 APEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 191 DFGLAR 196
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 102/277 (36%), Gaps = 67/277 (24%)
Query: 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 470
G + SLP+ + +E + LG GGFG+V+ ++ G A+K+ R ++ S +R
Sbjct: 2 GGRSPSLPT-QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERW 59
Query: 471 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 530
E+ + +L H +VV S+ +V
Sbjct: 60 CLEIQIMKKLNHPNVV-----------------------------------SAREVPDGL 84
Query: 531 NKLESTYL-YIQMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585
KL L + MEYC R FE+ + L I L ++H IIH
Sbjct: 85 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIH 144
Query: 586 RDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYF 642
RDL P NI R KI D G AK +LDQ
Sbjct: 145 RDLKPENIVLQPGPQRLIHKIIDLGYAK-----ELDQGELCTEFVGTLQ----------- 188
Query: 643 YTAPE-IEQGWPKIDEKADMYSLGIVFFEL---WHPF 675
Y APE +EQ K D +S G + FE + PF
Sbjct: 189 YLAPELLEQK--KYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 65/280 (23%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYY 489
LG G +G V ++ + A+K+I +D S P+++ E+A L+H+++V+Y
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE----EIALHKHLKHKNIVQYL 71
Query: 490 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 549
++ E G + + G G+L++ L
Sbjct: 72 GSFSENGFIKIFMEQVPG-GSLSA----------------------------------LL 96
Query: 550 RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI-KIGDFGL 608
R + ++ + ++ +QI+EGL ++H I+HRD+ +N+ + + + KI DFG
Sbjct: 97 RSKWGPLKDNEQTIGFYT-KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT 155
Query: 609 AKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK-IDEKADMYSLGIV 667
+K L P Y APEI P+ + AD++SLG
Sbjct: 156 SKRLA-------GINPCTETFTGTLQ--------YMAPEIIDKGPRGYGKAADIWSLGCT 200
Query: 668 FFELWH---PFSTAMERQIVLSDL---KQKGELPPSWVAK 701
E+ PF E Q + + K E+P S A+
Sbjct: 201 IIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAE 240
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 92/255 (36%), Gaps = 71/255 (27%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ + + LQ +G G FG V+L + G AVK I K+ L E + +++L+H
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRH 58
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ E E LYI
Sbjct: 59 SNLVQLLGVIVE---------------------------------------EKGGLYIVT 79
Query: 543 EYCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
EY + LR S D L + L + E + ++ G +HRDL N+
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGNNFVHRDLAARNVLVSE 137
Query: 598 RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE 657
N K+ DFGL K + P +TAPE + K
Sbjct: 138 DNVAKVSDFGLTK--EASSTQDTGKLPVK----------------WTAPEALRE-KKFST 178
Query: 658 KADMYSLGIVFFELW 672
K+D++S GI+ +E++
Sbjct: 179 KSDVWSFGILLWEIY 193
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ +HRDL NI ++ K+ DFG+++ L + D +AA+
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTR 177
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+TAPE + K +D++S GIV +E+ P+ M Q
Sbjct: 178 GGKIPIR---------WTAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-MSNQ 226
Query: 683 IVLSDLKQKGELPP 696
V+ +++ LPP
Sbjct: 227 DVIKAIEEGYRLPP 240
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 92/250 (36%), Gaps = 64/250 (25%)
Query: 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
+Q +G G FG V L L+ A+K IR S + + E + +L H +V+
Sbjct: 13 VQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQL 68
Query: 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 548
Y E + M E+ S YL RT
Sbjct: 69 YGVCLEQAPICLVTEFM------------------------EHGCLSDYL--------RT 96
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
R +F + E + + EG+A++ +IHRDL N IK+ DFG+
Sbjct: 97 QRGLFAA------ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 150
Query: 609 AKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGI 666
+F+ +Q FP + +PE+ + + K+D++S G+
Sbjct: 151 TRFVLDDQYTSSTGTKFPVK----------------WASPEV-FSFSRYSSKSDVWSFGV 193
Query: 667 VFFELWHPFS 676
+ +W FS
Sbjct: 194 L---MWEVFS 200
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 65/258 (25%)
Query: 423 LNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP----VNDRILREVATL 477
+ DF ++ + LG G F V C+ K G YA K I+ + + I REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 478 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
++ H +V+ + + EN+ +
Sbjct: 70 RQVLHHNVITLHDVY-------------------------------------ENRTD-VV 91
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
L +++ L + +E A +QI++G+ ++H + I H DL P NI
Sbjct: 92 LILEL-VSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 598 RN----DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
+N IK+ DFGLA +++ F + APEI P
Sbjct: 151 KNIPIPHIKLIDFGLA-----HEIEDGVEFKNIFGTPE-----------FVAPEIVNYEP 194
Query: 654 KIDEKADMYSLGIVFFEL 671
+ +ADM+S+G++ + L
Sbjct: 195 -LGLEADMWSIGVITYIL 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 64/254 (25%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYA---VKKIRLKDKSLPVN-DRILREVATLSRLQ 481
+E + LG G F V C+ K G+ YA +KK RL V+ + I REV L ++
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 482 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 541
H +++ + + ENK + L ++
Sbjct: 74 HPNIITLHDIF-------------------------------------ENKTD-VVLILE 95
Query: 542 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-- 599
+ L + ++ A +QI++G+ ++H + I H DL P NI +N
Sbjct: 96 L-VSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 154
Query: 600 --DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE 657
IK+ DFG+A +++ F + APEI P +
Sbjct: 155 NPRIKLIDFGIA-----HKIEAGNEFKNIFGTPE-----------FVAPEIVNYEP-LGL 197
Query: 658 KADMYSLGIVFFEL 671
+ADM+S+G++ + L
Sbjct: 198 EADMWSIGVITYIL 211
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 65/258 (25%)
Query: 423 LNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP----VNDRILREVATL 477
+ DF ++ + LG G F V C+ K G YA K I+ + + I REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 478 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 537
++ H +V+ + + EN+ +
Sbjct: 70 RQVLHHNVITLHDVY-------------------------------------ENRTD-VV 91
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
L +++ L + +E A +QI++G+ ++H + I H DL P NI
Sbjct: 92 LILEL-VSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 598 RN----DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
+N IK+ DFGLA +++ F + APEI P
Sbjct: 151 KNIPIPHIKLIDFGLA-----HEIEDGVEFKNIFGTPE-----------FVAPEIVNYEP 194
Query: 654 KIDEKADMYSLGIVFFEL 671
+ +ADM+S+G++ + L
Sbjct: 195 -LGLEADMWSIGVITYIL 211
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 618
F E + + EG+A++ +IHRDL N IK+ DFG+ +F+ +Q
Sbjct: 100 FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 159
Query: 619 QDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
FP + +PE+ + + K+D++S G++ +W FS
Sbjct: 160 SSTGTKFPVK----------------WASPEV-FSFSRYSSKSDVWSFGVL---MWEVFS 199
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ +HRDL NI ++ K+ DFG+++ L + D +AA+
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTR 171
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+TAPE + K +D++S GIV +E+ P+ M Q
Sbjct: 172 GGKIPIR---------WTAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-MSNQ 220
Query: 683 IVLSDLKQKGELPP 696
V+ +++ LPP
Sbjct: 221 DVIKAIEEGYRLPP 234
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R + G+ ++ G +HRDL N+ D+ K+ DFGL++ L + D DAA+
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL---EDDPDAAYTTT 212
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+TAPE + +D++S G+V +E+ P+ R
Sbjct: 213 GGKIPIR---------WTAPE-AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
Query: 683 IVLSDLKQKGELP 695
V+S +++ LP
Sbjct: 263 -VISSVEEGYRLP 274
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+
Sbjct: 129 MLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTR 185
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + K +D++S GIV +E+
Sbjct: 186 GGKIPIR---------WTAPE-AIAFRKFTSASDVWSYGIVMWEV 220
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
Q+ EG+ ++ + IHRDL N+ R+ +KIGDFGL + L
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
Q+ EG+ ++ + IHRDL N+ R+ +KIGDFGL + L
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
Q+ EG+ ++ + IHRDL N+ R+ +KIGDFGL + L
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
Q+ EG+ ++ + IHRDL N+ R+ +KIGDFGL + L
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
Q+ EG+ ++ + IHRDL N+ R+ +KIGDFGL + L
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ L G FG V +G A+K++R + S N
Sbjct: 10 APNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 68
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 69 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 99
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L +Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 100 ----------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 149
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
Q+ EG+ ++ + IHRDL N+ R+ +KIGDFGL + L
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
Q+ EG+ ++ + IHRDL N+ R+ +KIGDFGL + L
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 63
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 64 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 94
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L +Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 95 ----------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFG AK L E+ + A
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 98/263 (37%), Gaps = 67/263 (25%)
Query: 419 SSRYLNDFEEL---QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 475
S +++ D EL Q +G G FG V L L+ A+K IR S + + E
Sbjct: 2 SGKWVIDPSELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMS---EEDFIEEAE 57
Query: 476 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 535
+ +L H +V+ Y E + M E+ S
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFM------------------------EHGCLS 93
Query: 536 TYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595
YL RT R +F + E + + EG+A++ +IHRDL N
Sbjct: 94 DYL--------RTQRGLFAA------ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV 139
Query: 596 DARNDIKIGDFGLAKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWP 653
IK+ DFG+ +F+ +Q FP + +PE+ +
Sbjct: 140 GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----------------WASPEV-FSFS 182
Query: 654 KIDEKADMYSLGIVFFELWHPFS 676
+ K+D++S G++ +W FS
Sbjct: 183 RYSSKSDVWSFGVL---MWEVFS 202
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 7 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 65
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 66 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 96
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L +Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 97 ----------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 146
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFG AK L E+ + A
Sbjct: 147 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 180
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 63
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 64 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 94
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L +Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 95 ----------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFG AK L E+ + A
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F F +LA + Q+ LA++ + +HRD+ N+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 596 DARNDIKIGDFGLAKFLK 613
A + +K+GDFGL+++++
Sbjct: 145 SATDCVKLGDFGLSRYME 162
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 24 KPLGRGAFGQVI------EADAFGIDKTA---TCRTVAVKMLKEGATHS--EHRALMSEL 72
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L F S + + N+ ++ +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE------FVPYKV 126
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 127 APEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 182 DFGLAR 187
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 92/250 (36%), Gaps = 64/250 (25%)
Query: 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
+Q +G G FG V L L+ A+K IR S + + E + +L H +V+
Sbjct: 10 VQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQL 65
Query: 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 548
Y E + M E+ S YL RT
Sbjct: 66 YGVCLEQAPICLVFEFM------------------------EHGCLSDYL--------RT 93
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
R +F + E + + EG+A++ +IHRDL N IK+ DFG+
Sbjct: 94 QRGLFAA------ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 147
Query: 609 AKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGI 666
+F+ +Q FP + +PE+ + + K+D++S G+
Sbjct: 148 TRFVLDDQYTSSTGTKFPVK----------------WASPEV-FSFSRYSSKSDVWSFGV 190
Query: 667 VFFELWHPFS 676
+ +W FS
Sbjct: 191 L---MWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 92/250 (36%), Gaps = 64/250 (25%)
Query: 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
+Q +G G FG V L L+ A+K IR S + + E + +L H +V+
Sbjct: 12 VQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQL 67
Query: 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 548
Y E + M E+ S YL RT
Sbjct: 68 YGVCLEQAPICLVFEFM------------------------EHGCLSDYL--------RT 95
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
R +F + E + + EG+A++ +IHRDL N IK+ DFG+
Sbjct: 96 QRGLFAA------ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 149
Query: 609 AKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGI 666
+F+ +Q FP + +PE+ + + K+D++S G+
Sbjct: 150 TRFVLDDQYTSSTGTKFPVK----------------WASPEV-FSFSRYSSKSDVWSFGV 192
Query: 667 VFFELWHPFS 676
+ +W FS
Sbjct: 193 L---MWEVFS 199
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI EG+A I + IHR+L NI KI DFGLA+ ++ + + A FP
Sbjct: 113 QIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK- 171
Query: 628 XXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE I G I K+D++S GI+ E+
Sbjct: 172 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEI 199
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
Q+ G+A+I IHRDL NI KI DFGLA+ ++ + Q A FP
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK- 171
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + + K+D++S GI+ EL
Sbjct: 172 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 199
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 23/121 (19%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPXXX 627
QI G+A++ +HRDL NI K+ DFGL + ++ + Q A FP
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIK- 347
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQI 683
+TAPE + + K+D++S GI+ EL P+ + R++
Sbjct: 348 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 391
Query: 684 V 684
+
Sbjct: 392 L 392
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ +HRDL NI ++ K+ DFG+++ L + D +AA+
Sbjct: 136 MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTR 192
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+TAPE + K +D++S GIV +E+ P+ M Q
Sbjct: 193 GGKIPIR---------WTAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-MSNQ 241
Query: 683 IVLSDLKQKGELPP 696
V+ +++ LPP
Sbjct: 242 DVIKAIEEGYRLPP 255
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 92/255 (36%), Gaps = 71/255 (27%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ + + LQ +G G FG V+L + G AVK I K+ L E + +++L+H
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRH 245
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ E E LYI
Sbjct: 246 SNLVQLLGVIVE---------------------------------------EKGGLYIVT 266
Query: 543 EYCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
EY + LR S D L + L + E + ++ G +HRDL N+
Sbjct: 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGNNFVHRDLAARNVLVSE 324
Query: 598 RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE 657
N K+ DFGL K + P +TAPE + K
Sbjct: 325 DNVAKVSDFGLTK--EASSTQDTGKLPVK----------------WTAPEALRE-KKFST 365
Query: 658 KADMYSLGIVFFELW 672
K+D++S GI+ +E++
Sbjct: 366 KSDVWSFGILLWEIY 380
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 35 KPLGRGAFGQVI------EADAFGIDKTA---TCRTVAVKMLKEGATHS--EHRALMSEL 83
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L F S + + N+ ++ +
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE------FVPYKE 137
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 138 APEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 192
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 193 DFGLAR 198
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 91/249 (36%), Gaps = 64/249 (25%)
Query: 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 485
+ + +G G G V + G+ A++++ L+ + P + I+ E+ + ++ ++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNI 80
Query: 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 545
V Y ++ GD +W + MEY
Sbjct: 81 VNYLDSYLV-------GDELW---------------------------------VVMEYL 100
Query: 546 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 605
+ D+ + R+ ++ L +H +IHR++ +NI +K+ D
Sbjct: 101 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTD 160
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEI---EQGWPKIDEKADMY 662
FG + EQ + ++ APE+ + PK+ D++
Sbjct: 161 FGFCAQITPEQSKRSTMVGTP---------------YWMAPEVVTRKAYGPKV----DIW 201
Query: 663 SLGIVFFEL 671
SLGI+ E+
Sbjct: 202 SLGIMAIEM 210
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 54/201 (26%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
LG G +V ++K G +A+K PV D +RE L +L H+++V+ +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPV-DVQMREFEVLKKLNHKNIVKLFAI 75
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLR 550
E + + + + ME+CP +L
Sbjct: 76 --------------------------------------EEETTTRHKVLIMEFCPCGSLY 97
Query: 551 QVFE----SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF----DARNDIK 602
V E +Y + E + R +V G+ H+ GI+HR++ P NI D ++ K
Sbjct: 98 TVLEEPSNAYGLPESEFLI-VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYK 156
Query: 603 IGDFGLAKFLKLEQLDQDAAF 623
+ DFG A+ +L+ D F
Sbjct: 157 LTDFGAAR-----ELEDDEQF 172
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F F +LA + Q+ LA++ + +HRD+ N+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 596 DARNDIKIGDFGLAKFLK 613
A + +K+GDFGL+++++
Sbjct: 525 SATDCVKLGDFGLSRYME 542
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 10 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 68
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 69 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 99
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 100 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 149
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFG AK L E+ + A
Sbjct: 150 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 44/202 (21%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSR 479
+F++++ LG G FG V +G A+K++R + S N IL E ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMAS 67
Query: 480 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 539
+ + HV R G +ST L
Sbjct: 68 VDNPHVCRLL-------------------GICLTSTVQ--------------------LI 88
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
Q+ L V E D+ + + QI +G+ ++ + ++HRDL N+
Sbjct: 89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ 148
Query: 600 DIKIGDFGLAKFLKLEQLDQDA 621
+KI DFGLAK L E+ + A
Sbjct: 149 HVKITDFGLAKLLGAEEKEYHA 170
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ L G FG V +G A+K++R + S N
Sbjct: 10 APNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 68
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 69 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 99
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 100 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 149
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFGLAK L E+ + A
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 61
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 62 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 92
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 93 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFG AK L E+ + A
Sbjct: 143 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 25/124 (20%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAK-FLKL 614
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK
Sbjct: 158 FTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217
Query: 615 EQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 671
L P +Y APE+ G K D+ D +SLG++ + L
Sbjct: 218 NSLTTPCYTP-----------------YYVAPEV-LGPEKYDKSCDXWSLGVIXYILLCG 259
Query: 672 WHPF 675
+ PF
Sbjct: 260 YPPF 263
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
L V E D+ + + QI +G+ ++ + ++HRDL N+ +KI DFGL
Sbjct: 104 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL 163
Query: 609 AKFLKLEQLDQDA 621
AK L E+ + A
Sbjct: 164 AKLLGAEEKEYHA 176
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 44/214 (20%)
Query: 412 SPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVN 467
+PN +L +F++++ LG G FG V +G A+K++R + S N
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKAN 63
Query: 468 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 527
IL E ++ + + HV R G +ST
Sbjct: 64 KEILDEAYVMASVDNPHVCRLL-------------------GICLTSTVQ---------- 94
Query: 528 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587
L Q+ L V E D+ + + QI +G+ ++ + ++HRD
Sbjct: 95 ----------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 621
L N+ +KI DFG AK L E+ + A
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ + + D +A +
Sbjct: 150 MLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI---EDDPEAVYTTT 206
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE Q + K +D++S GIV +E+
Sbjct: 207 GGKIPVR---------WTAPEAIQ-YRKFTSASDVWSYGIVMWEV 241
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F F +LA + Q+ LA++ + +HRD+ N+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 596 DARNDIKIGDFGLAKFLK 613
+ + +K+GDFGL+++++
Sbjct: 145 SSNDCVKLGDFGLSRYME 162
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 54/201 (26%)
Query: 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 491
LG G +V ++K G +A+K PV D +RE L +L H+++V+ +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPV-DVQMREFEVLKKLNHKNIVKLFAI 75
Query: 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLR 550
E + + + + ME+CP +L
Sbjct: 76 --------------------------------------EEETTTRHKVLIMEFCPCGSLY 97
Query: 551 QVFE----SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF----DARNDIK 602
V E +Y + E + R +V G+ H+ GI+HR++ P NI D ++ K
Sbjct: 98 TVLEEPSNAYGLPESEFLI-VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYK 156
Query: 603 IGDFGLAKFLKLEQLDQDAAF 623
+ DFG A+ +L+ D F
Sbjct: 157 LTDFGAAR-----ELEDDEQF 172
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Query: 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXX 633
GL ++H + IIHRD+ NI D KI DFG++K K +L Q
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELGQ-----------THL 197
Query: 634 XXXXXXXYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 671
Y PE +G ++ EK+D+YS G+V FE+
Sbjct: 198 XXVVKGTLGYIDPEYFIKG--RLTEKSDVYSFGVVLFEV 234
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDLT N+ N +KI DFGLA+
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 91/255 (35%), Gaps = 71/255 (27%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
+ + + LQ +G G FG V+L + G AVK I K+ L E + +++L+H
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRH 64
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++V+ E E LYI
Sbjct: 65 SNLVQLLGVIVE---------------------------------------EKGGLYIVT 85
Query: 543 EYCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 597
EY + LR S D L + L + E + ++ G +HRDL N+
Sbjct: 86 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGNNFVHRDLAARNVLVSE 143
Query: 598 RNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDE 657
N K+ DFGL K + P +TAPE +
Sbjct: 144 DNVAKVSDFGLTK--EASSTQDTGKLPVK----------------WTAPEALRE-AAFST 184
Query: 658 KADMYSLGIVFFELW 672
K+D++S GI+ +E++
Sbjct: 185 KSDVWSFGILLWEIY 199
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489
+PLG G FG V+ + + + K V ++L+E AT S +H+ ++
Sbjct: 35 KPLGRGAFGQVI------EADAFGIDKTATXRT---VAVKMLKEGATHS--EHRALMSEL 83
Query: 490 QAWFETG----VADFDGDSMWGSGTLASST-FSNRAASSADVTGQENKLESTYLYIQMEY 544
+ G V + G G L F S + + N+ + Y
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF--------VPY 135
Query: 545 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 604
P L + F + +H L + F Q+ +G+ + + IHRDL NI +N +KI
Sbjct: 136 KPEDLYKDFLTLEH----LIXYSF-QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIC 190
Query: 605 DFGLAK 610
DFGLA+
Sbjct: 191 DFGLAR 196
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 38/194 (19%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDR---ILREVATLSR 479
N+ + + LG G FG VV G+ AV K+ +K KS D ++ E+ +S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 480 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSN--RAASSADVTGQENKLEST 536
L QH+++V G G + + N R + AD+ ++ +
Sbjct: 98 LGQHENIVNL------LGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR---- 147
Query: 537 YLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
P LR + H Q+ +G+A + + IHRD+ N+
Sbjct: 148 ---------PLELRDLL------------HFSSQVAQGMAFLASKNCIHRDVAARNVLLT 186
Query: 597 ARNDIKIGDFGLAK 610
+ KIGDFGLA+
Sbjct: 187 NGHVAKIGDFGLAR 200
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F F +LA + Q+ LA++ + +HRD+ N+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 596 DARNDIKIGDFGLAKFLK 613
+ + +K+GDFGL+++++
Sbjct: 525 SSNDCVKLGDFGLSRYME 542
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
++IV+G+ ++H +GI+H+DL N+F+D + I DFGL
Sbjct: 137 QEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGL 175
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 38/194 (19%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDR---ILREVATLSR 479
N+ + + LG G FG VV G+ AV K+ +K KS D ++ E+ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 480 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSN--RAASSADVTGQENKLEST 536
L QH+++V G G + + N R + AD+ ++ +
Sbjct: 106 LGQHENIVNL------LGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR---- 155
Query: 537 YLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
P LR + H Q+ +G+A + + IHRD+ N+
Sbjct: 156 ---------PLELRDLL------------HFSSQVAQGMAFLASKNCIHRDVAARNVLLT 194
Query: 597 ARNDIKIGDFGLAK 610
+ KIGDFGLA+
Sbjct: 195 NGHVAKIGDFGLAR 208
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 547 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGD 605
+ LRQ YD + ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D
Sbjct: 122 KQLRQTLTDYD-----IRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLID 175
Query: 606 FGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLG 665
+GLA+F Q ++ PE+ + D DM+SLG
Sbjct: 176 WGLAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG 219
Query: 666 IVF 668
+
Sbjct: 220 CML 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 37/192 (19%)
Query: 432 LGHGGFGHVVLCKN-KLDGR--HYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQHVVR 487
LG G FG VV L GR + V LK+ + P R +L E L ++ H HV++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 488 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 547
Y A + G L + S + K+ YL
Sbjct: 91 LYGACSQ-------------DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 548 TLRQVFESYDHFDKE---------LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 598
+L DH D+ AW QI +G+ ++ ++HRDL NI
Sbjct: 138 SL-------DHPDERALTMGDLISFAW----QISQGMQYLAEMSLVHRDLAARNILVAEG 186
Query: 599 NDIKIGDFGLAK 610
+KI DFGL++
Sbjct: 187 RKMKISDFGLSR 198
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 37/151 (24%)
Query: 497 VADFDGDSMWGSGTLASSTFSNRAAS---------SADVTGQENKLESTYL--------- 538
+ DF+ + G G+ S R + DV Q++ +E T +
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 539 ----YIQMEYCPRTLRQVFESYDHFDK-ELAWHL-----FRQ---------IVEGLAHIH 579
Q+ C +T+ +++ ++ + +L +H+ F++ I GL +
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+GII+RDL +N+ D+ IKI DFG+ K
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R + G+ ++ G +HRDL N+ D+ K+ DFGL++ L + D DAA
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL---EDDPDAAXTTT 212
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 682
+TAPE + +D++S G+V +E+ P+ R
Sbjct: 213 GGKIPIR---------WTAPE-AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
Query: 683 IVLSDLKQKGELP 695
V+S +++ LP
Sbjct: 263 -VISSVEEGYRLP 274
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 57/255 (22%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
SS L DF+ L+ +G G + V+L + K R YA+K ++ K L +D + V T
Sbjct: 15 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK---KELVNDDEDIDWVQT-- 69
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TY 537
+HV FE +A++ + G + ++ +
Sbjct: 70 ---EKHV-------FE------------------------QASNHPFLVGLHSCFQTESR 95
Query: 538 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
L+ +EY L + +E A +I L ++H +GII+RDL +N+ D
Sbjct: 96 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 155
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
+ IK+ D+G+ K L D + F Y APEI +G
Sbjct: 156 SEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPN--------------YIAPEILRG-EDYG 199
Query: 657 EKADMYSLGIVFFEL 671
D ++LG++ FE+
Sbjct: 200 FSVDWWALGVLMFEM 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 37/192 (19%)
Query: 432 LGHGGFGHVVLCKN-KLDGR--HYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQHVVR 487
LG G FG VV L GR + V LK+ + P R +L E L ++ H HV++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 488 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 547
Y A + G L + S + K+ YL
Sbjct: 91 LYGACSQ-------------DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 548 TLRQVFESYDHFDKE---------LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 598
+L DH D+ AW QI +G+ ++ ++HRDL NI
Sbjct: 138 SL-------DHPDERALTMGDLISFAW----QISQGMQYLAEMKLVHRDLAARNILVAEG 186
Query: 599 NDIKIGDFGLAK 610
+KI DFGL++
Sbjct: 187 RKMKISDFGLSR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 37/192 (19%)
Query: 432 LGHGGFGHVVLCKN-KLDGR--HYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQHVVR 487
LG G FG VV L GR + V LK+ + P R +L E L ++ H HV++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 488 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 547
Y A + G L + S + K+ YL
Sbjct: 91 LYGACSQ-------------DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 548 TLRQVFESYDHFDKE---------LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 598
+L DH D+ AW QI +G+ ++ ++HRDL NI
Sbjct: 138 SL-------DHPDERALTMGDLISFAW----QISQGMQYLAEMKLVHRDLAARNILVAEG 186
Query: 599 NDIKIGDFGLAK 610
+KI DFGL++
Sbjct: 187 RKMKISDFGLSR 198
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 47/189 (24%)
Query: 432 LGHGGFGHV---VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
LG G FG V V +K + + AVK + KD +L ++ + E + L H H+V+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 547
G+ +E +I ME P
Sbjct: 91 ------IGI-----------------------------------IEEEPTWIIMELYPYG 109
Query: 548 TLRQVFESYDHFDKELAWHLFR-QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 606
L E + K L L+ QI + +A++ +HRD+ NI + +K+GDF
Sbjct: 110 ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF 169
Query: 607 GLAKFLKLE 615
GL+++++ E
Sbjct: 170 GLSRYIEDE 178
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 46/220 (20%)
Query: 407 SVDSGSPN-----MSLPSSRYLNDFEELQ-----PLGHGGFGHVVLC----KNKLDGRHY 452
VD G+ N M P + L+D E Q +G GGFG + L K + D RH
Sbjct: 10 GVDLGTENLYFQSMPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARH- 68
Query: 453 AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM-WGSGTL 511
V K+ ++ N + E+ R+ + ++ W E D+ G + +GSG
Sbjct: 69 -VVKVEYQE-----NGPLFSELKFYQRVAKKDCIK---KWIERKQLDYLGIPLFYGSGL- 118
Query: 512 ASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQI 571
+ F R +Y ++ ME L+++ F K L ++
Sbjct: 119 --TEFKGR----------------SYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRM 160
Query: 572 VEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLA 609
++ L +IH +H D+ N+ +N + + D+GL+
Sbjct: 161 LDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLS 200
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 542 MEYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD-ARN 599
EY T +Q+++ FD + ++++ ++++ L + H +GI+HRD+ P+N+ D +
Sbjct: 114 FEYINNTDFKQLYQILTDFD--IRFYMY-ELLKALDYCHSKGIMHRDVKPHNVMIDHQQK 170
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
+++ D+GLA+F Q ++ PE+ + D
Sbjct: 171 KLRLIDWGLAEFYHPAQ----------------EYNVRVASRYFKGPELLVDYQMYDYSL 214
Query: 660 DMYSLGIVF 668
DM+SLG +
Sbjct: 215 DMWSLGCML 223
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXX 626
+ R I G+ ++ +HRDL NI ++ K+ DFGL++ L + D +A +
Sbjct: 152 MLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL---EDDPEATYTTS 208
Query: 627 XXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TAPE + K +D++S GIV +E+
Sbjct: 209 GGKIPIR---------WTAPE-AISYRKFTSASDVWSFGIVMWEV 243
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F + +LA + Q+ LA++ + +HRD+ N+
Sbjct: 113 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 172
Query: 596 DARNDIKIGDFGLAKFLK 613
+ + +K+GDFGL+++++
Sbjct: 173 SSNDCVKLGDFGLSRYME 190
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 47/189 (24%)
Query: 432 LGHGGFGHV---VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
LG G FG V V +K + + AVK + KD +L ++ + E + L H H+V+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 547
G+ +E +I ME P
Sbjct: 75 ------IGI-----------------------------------IEEEPTWIIMELYPYG 93
Query: 548 TLRQVFESYDHFDKELAWHLFR-QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 606
L E + K L L+ QI + +A++ +HRD+ NI + +K+GDF
Sbjct: 94 ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF 153
Query: 607 GLAKFLKLE 615
GL+++++ E
Sbjct: 154 GLSRYIEDE 162
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F + +LA + Q+ LA++ + +HRD+ N+
Sbjct: 87 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 146
Query: 596 DARNDIKIGDFGLAKFLK 613
+ + +K+GDFGL+++++
Sbjct: 147 SSNDCVKLGDFGLSRYME 164
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F + +LA + Q+ LA++ + +HRD+ N+
Sbjct: 88 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 147
Query: 596 DARNDIKIGDFGLAKFLK 613
+ + +K+GDFGL+++++
Sbjct: 148 SSNDCVKLGDFGLSRYME 165
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F + +LA + Q+ LA++ + +HRD+ N+
Sbjct: 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 149
Query: 596 DARNDIKIGDFGLAKFLK 613
+ + +K+GDFGL+++++
Sbjct: 150 SSNDCVKLGDFGLSRYME 167
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
++ E P L + F + +H L + F Q+ +G+ + + IHRDL NI +N
Sbjct: 181 VEEEEAPEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKN 235
Query: 600 DIKIGDFGLAK 610
+KI DFGLA+
Sbjct: 236 VVKICDFGLAR 246
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
++ E P L + F + +H L + F Q+ +G+ + + IHRDL NI +N
Sbjct: 183 VEEEEAPEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKN 237
Query: 600 DIKIGDFGLAK 610
+KI DFGLA+
Sbjct: 238 VVKICDFGLAR 248
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 47/189 (24%)
Query: 432 LGHGGFGHV---VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
LG G FG V V +K + + AVK + KD +L ++ + E + L H H+V+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 547
G+ +E +I ME P
Sbjct: 79 ------IGI-----------------------------------IEEEPTWIIMELYPYG 97
Query: 548 TLRQVFESYDHFDKELAWHLFR-QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 606
L E + K L L+ QI + +A++ +HRD+ NI + +K+GDF
Sbjct: 98 ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF 157
Query: 607 GLAKFLKLE 615
GL+++++ E
Sbjct: 158 GLSRYIEDE 166
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
++ E P L + F + +H L + F Q+ +G+ + + IHRDL NI +N
Sbjct: 176 VEEEEAPEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKN 230
Query: 600 DIKIGDFGLAK 610
+KI DFGLA+
Sbjct: 231 VVKICDFGLAR 241
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 538 LYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
LY MEY L + F + A +I GL + +GII+RDL +N+ D
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 597 ARNDIKIGDFGLAK 610
+ IKI DFG+ K
Sbjct: 477 SEGHIKIADFGMCK 490
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 540 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 599
++ E P L + F + +H L + F Q+ +G+ + + IHRDL NI +N
Sbjct: 174 VEEEEAPEDLYKDFLTLEH----LICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKN 228
Query: 600 DIKIGDFGLAK 610
+KI DFGLA+
Sbjct: 229 VVKICDFGLAR 239
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F + +LA + Q+ LA++ + +HRD+ N+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 596 DARNDIKIGDFGLAKFLK 613
+ + +K+GDFGL+++++
Sbjct: 145 SSNDCVKLGDFGLSRYME 162
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F + +LA + Q+ LA++ + +HRD+ N+
Sbjct: 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 141
Query: 596 DARNDIKIGDFGLAKFLK 613
+ + +K+GDFGL+++++
Sbjct: 142 SSNDCVKLGDFGLSRYME 159
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 538 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--QIVEGLAHIHGQGIIHRDLTPNNIFF 595
++I ME C + F + +LA + Q+ LA++ + +HRD+ N+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 596 DARNDIKIGDFGLAKFLK 613
+ + +K+GDFGL+++++
Sbjct: 145 SSNDCVKLGDFGLSRYME 162
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 88/247 (35%), Gaps = 45/247 (18%)
Query: 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 488
+Q LG GGF +V L + DG YA+K+I ++ + RE H +++R
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ--DREEAQREADMHRLFNHPNILRL 91
Query: 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 548
A + W F R ++ ++K +L
Sbjct: 92 VAYCLRERGAKHEA---W-----LLLPFFKRGTLWNEIERLKDK--GNFLT--------- 132
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 608
+ ++ W L I GL IH +G HRDL P NI +GD G
Sbjct: 133 -----------EDQILW-LLLGICRGLEAIHAKGYAHRDLKPTNIL--------LGDEGQ 172
Query: 609 AKFLKLEQLDQDAAFPXXXXXXXXXX--XXXXXXYFYTAPEI--EQGWPKIDEKADMYSL 664
+ L ++Q Y APE+ Q IDE+ D++SL
Sbjct: 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232
Query: 665 GIVFFEL 671
G V + +
Sbjct: 233 GCVLYAM 239
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 542 MEYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD-ARN 599
EY T +Q+++ FD + ++++ ++++ L + H +GI+HRD+ P+N+ D +
Sbjct: 119 FEYINNTDFKQLYQILTDFD--IRFYMY-ELLKALDYCHSKGIMHRDVKPHNVMIDHQQK 175
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKA 659
+++ D+GLA+F Q ++ PE+ + D
Sbjct: 176 KLRLIDWGLAEFYHPAQ----------------EYNVRVASRYFKGPELLVDYQMYDYSL 219
Query: 660 DMYSLGIVF 668
DM+SLG +
Sbjct: 220 DMWSLGCML 228
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 57/255 (22%)
Query: 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 478
SS L DF+ L+ +G G + V+L + K R YA++ ++ K L +D + V T
Sbjct: 47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVK---KELVNDDEDIDWVQT-- 101
Query: 479 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TY 537
+HV FE +A++ + G + ++ +
Sbjct: 102 ---EKHV-------FE------------------------QASNHPFLVGLHSCFQTESR 127
Query: 538 LYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 596
L+ +EY L + +E A +I L ++H +GII+RDL +N+ D
Sbjct: 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 187
Query: 597 ARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKID 656
+ IK+ D+G+ K L D + F Y APEI +G
Sbjct: 188 SEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPN--------------YIAPEILRG-EDYG 231
Query: 657 EKADMYSLGIVFFEL 671
D ++LG++ FE+
Sbjct: 232 FSVDWWALGVLMFEM 246
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 125 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 178
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 179 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 118/284 (41%), Gaps = 56/284 (19%)
Query: 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 480
+Y+ND+ ++ L G F ++LC+ D + YA+KK +KSL L + ++
Sbjct: 28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKY---EKSL------LEKKRDFTKS 76
Query: 481 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 540
+ + ++ DF + + + + + + +++ Y Y+
Sbjct: 77 NNDKIS------IKSKYDDFKNELQ-----IITDIKNEYCLTCEGIITNYDEVYIIYEYM 125
Query: 541 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVE--------GLAHIHGQ-GIIHRDLTPN 591
+ + ++ + E + DK + Q+++ ++IH + I HRD+ P+
Sbjct: 126 END----SILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPS 181
Query: 592 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 651
NI D +K+ DFG ++++ +++ Y + PE
Sbjct: 182 NILMDKNGRVKLSDFGESEYMVDKKIKGSRG-----------------TYEFMPPEFFSN 224
Query: 652 WPKID-EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK 691
+ K D++SLGI + +++ PFS + + ++++ K
Sbjct: 225 ESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 33/198 (16%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDR---ILREVATLSR 479
N+ + + LG G FG VV G+ AV K+ +K KS D ++ E+ +S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 480 L-QHQHVVRYYQAWFETG----VADFD--GDSMWGSGTLASSTFSNRAASSADVTGQENK 532
L QH+++V A G + ++ GD + A + A D G + +
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 533 LESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 592
+ P LR + H Q+ +G+A + + IHRD+ N
Sbjct: 151 ----------DGRPLELRDLL------------HFSSQVAQGMAFLASKNCIHRDVAARN 188
Query: 593 IFFDARNDIKIGDFGLAK 610
+ + KIGDFGLA+
Sbjct: 189 VLLTNGHVAKIGDFGLAR 206
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 126 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 179
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 180 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 218
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 125 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 178
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 179 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 217
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 124 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 177
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 178 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
H Q+ +G+A + + IHRD+ N+ + KIGDFGLA+
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF 172
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 173 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 124 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 177
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 178 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 216
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 124 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 177
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 178 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 216
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
H Q+ +G+A + + IHRD+ N+ + KIGDFGLA+
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
H Q+ +G+A + + IHRD+ N+ + KIGDFGLA+
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 58/121 (47%), Gaps = 20/121 (16%)
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFG 607
+Q++++ +D + ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+G
Sbjct: 121 FKQLYQTLTDYD--IRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
LA+F Q ++ PE+ + D DM+SLG +
Sbjct: 178 LAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 668 F 668
Sbjct: 222 L 222
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 145 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 198
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 199 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 237
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 124 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 177
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 178 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 216
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 124 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 177
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 178 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLD 618
D ++ ++++ ++++ L + H QGI+HRD+ P+N+ D +++ D+GLA+F
Sbjct: 124 DYDIRYYIY-ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----- 177
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
P ++ PE+ D DM+SLG +F
Sbjct: 178 -----PGKEYNVRVASR------YFKGPELLVDLQDYDYSLDMWSLGCMF 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 57/251 (22%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L DF+ L+ +G G + V+L + K R YA+K ++ K L +D + V T
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK---KELVNDDEDIDWVQT-----E 55
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TYLYIQ 541
+HV FE +A++ + G + ++ + L+
Sbjct: 56 KHV-------FE------------------------QASNHPFLVGLHSCFQTESRLFFV 84
Query: 542 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY L + +E A +I L ++H +GII+RDL +N+ D+
Sbjct: 85 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH 144
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
IK+ D+G+ K L D + F Y APEI +G D
Sbjct: 145 IKLTDYGMCK-EGLRPGDTTSXFCGTPN--------------YIAPEILRG-EDYGFSVD 188
Query: 661 MYSLGIVFFEL 671
++LG++ FE+
Sbjct: 189 WWALGVLMFEM 199
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 130 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQ-- 186
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 187 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 175 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 180 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 180 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 175 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 130 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 186
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 187 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 175 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 175 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 175 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 175 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 177 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 58/121 (47%), Gaps = 20/121 (16%)
Query: 549 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFG 607
+Q++++ +D + ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+G
Sbjct: 121 FKQLYQTLTDYD--IRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 608 LAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIV 667
LA+F Q ++ PE+ + D DM+SLG +
Sbjct: 178 LAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 668 F 668
Sbjct: 222 L 222
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 130 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 186
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 187 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ + + IHRDL NI +N +KI DFGLA+
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 130 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 186
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 187 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 130 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 186
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 187 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 180 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 180 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 130 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 186
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 187 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 128 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 187
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 188 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 130 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 186
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 187 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 135 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 191
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 192 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 227
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 177 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 21/145 (14%)
Query: 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLA---------- 609
+E +LF+ L IH GI+HRD+ P+N ++ R + DFGLA
Sbjct: 120 REYMLNLFK----ALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIEL 175
Query: 610 -KFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYF--YTAPEIEQGWPKIDEKADMYSLGI 666
KF++ E + + + APE+ P DM+S G+
Sbjct: 176 LKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV 235
Query: 667 VFFELW---HPFSTAMERQIVLSDL 688
+F L +PF A + L+ +
Sbjct: 236 IFLSLLSGRYPFYKASDDLTALAQI 260
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 57/251 (22%)
Query: 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
L DF+ L+ +G G + V+L + K R YA+K ++ K L +D + V T
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK---KELVNDDEDIDWVQT-----E 59
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TYLYIQ 541
+HV FE +A++ + G + ++ + L+
Sbjct: 60 KHV-------FE------------------------QASNHPFLVGLHSCFQTESRLFFV 88
Query: 542 MEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 600
+EY L + +E A +I L ++H +GII+RDL +N+ D+
Sbjct: 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH 148
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
IK+ D+G+ K L D + F Y APEI +G D
Sbjct: 149 IKLTDYGMCK-EGLRPGDTTSXFCGTPN--------------YIAPEILRG-EDYGFSVD 192
Query: 661 MYSLGIVFFEL 671
++LG++ FE+
Sbjct: 193 WWALGVLMFEM 203
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 129 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 185
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 186 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 221
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 130 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 186
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 187 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 119 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 178
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 179 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF 175
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 176 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 128 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 184
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 185 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 98/265 (36%), Gaps = 57/265 (21%)
Query: 409 DSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 468
D GS + +P +E L+ +G G FG VV + +H A+K +R + + +
Sbjct: 83 DQGS-YVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR---FHR 138
Query: 469 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 528
+ E+ L L+ Q D D ++M L + TF N + +
Sbjct: 139 QAAEEIRILEHLRKQ---------------DKD-NTMNVIHMLENFTFRNHICMTFE--- 179
Query: 529 QENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
L S LY ++ + F L I++ L +H IIH DL
Sbjct: 180 ----LLSMNLYELIKK---------NKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDL 226
Query: 589 TPNNIFF--DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI R+ IK+ DFG + + FY AP
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCY------------------EHQRVYTXIQSRFYRAP 268
Query: 647 EIEQGWPKIDEKADMYSLGIVFFEL 671
E+ G + DM+SLG + EL
Sbjct: 269 EVILG-ARYGMPIDMWSLGCILAEL 292
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ + + IHRDL NI N +KI DFGLA+
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 179
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 180 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 173 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 173 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF 176
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 177 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLD 618
D ++ ++++ +I++ L + H GI+HRD+ P+N+ D + +++ D+GLA+F Q
Sbjct: 129 DYDIRFYMY-EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 185
Query: 619 QDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVF 668
++ PE+ + D DM+SLG +
Sbjct: 186 --------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 221
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 175
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 176 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 98/265 (36%), Gaps = 57/265 (21%)
Query: 409 DSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 468
D GS + +P +E L+ +G G FG VV + +H A+K +R + + +
Sbjct: 83 DQGS-YVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR---FHR 138
Query: 469 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 528
+ E+ L L+ Q D D ++M L + TF N + +
Sbjct: 139 QAAEEIRILEHLRKQ---------------DKD-NTMNVIHMLENFTFRNHICMTFE--- 179
Query: 529 QENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
L S LY ++ + F L I++ L +H IIH DL
Sbjct: 180 ----LLSMNLYELIKK---------NKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDL 226
Query: 589 TPNNIFF--DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI R+ IK+ DFG + + FY AP
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCY------------------EHQRVYTXIQSRFYRAP 268
Query: 647 EIEQGWPKIDEKADMYSLGIVFFEL 671
E+ G + DM+SLG + EL
Sbjct: 269 EVILG-ARYGMPIDMWSLGCILAEL 292
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 101/260 (38%), Gaps = 61/260 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
D L+ LG G FG V+ K G++ K+ +K+ S+ D + E + L H+
Sbjct: 8 KDLTFLKELGTGQFG--VVKYGKWRGQYDVAIKM-IKEGSMS-EDEFIEEAKVMMNLSHE 63
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+V+ Y GV + +A+ N YL
Sbjct: 64 KLVQLY------GVCTKQRPIFIITEYMANGCLLN------------------YL----- 94
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
R +R F++ + + + + E + ++ + +HRDL N + + +K+
Sbjct: 95 ---REMRHRFQTQQLLE------MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 145
Query: 604 GDFGLAKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
DFGL++++ ++ FP ++ PE+ + K K+D+
Sbjct: 146 SDFGLSRYVLDDEYTSSVGSKFPVR----------------WSPPEVLM-YSKFSSKSDI 188
Query: 662 YSLGIVFFELWHPFSTAMER 681
++ G++ +E++ ER
Sbjct: 189 WAFGVLMWEIYSLGKMPYER 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 63/261 (24%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
D L+ LG G FG V+ K G++ A+K I+ S D + E + L H
Sbjct: 24 KDLTFLKELGTGQFG--VVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSH 78
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+ +V+ Y GV + +A+ N YL
Sbjct: 79 EKLVQLY------GVCTKQRPIFIITEYMANGCLLN------------------YL---- 110
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
R +R F++ + + + + E + ++ + +HRDL N + + +K
Sbjct: 111 ----REMRHRFQTQQLLE------MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 160
Query: 603 IGDFGLAKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+ DFGL++++ ++ FP ++ PE+ + K K+D
Sbjct: 161 VSDFGLSRYVLDDEYTSSVGSKFPVR----------------WSPPEVLM-YSKFSSKSD 203
Query: 661 MYSLGIVFFELWHPFSTAMER 681
+++ G++ +E++ ER
Sbjct: 204 IWAFGVLMWEIYSLGKMPYER 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 103/260 (39%), Gaps = 61/260 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
D L+ LG G FG V+ K G++ K+ +K+ S+ D + E + L H+
Sbjct: 9 KDLTFLKELGTGQFG--VVKYGKWRGQYDVAIKM-IKEGSMS-EDEFIEEAKVMMNLSHE 64
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+V+ Y GV + +A+ N YL
Sbjct: 65 KLVQLY------GVCTKQRPIFIITEYMANGCLLN------------------YL----- 95
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
R +R F++ + + + + E + ++ + +HRDL N + + +K+
Sbjct: 96 ---REMRHRFQTQQLLE------MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 146
Query: 604 GDFGLAKFLKLEQL--DQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
DFGL++++ ++ + + FP ++ PE+ + K K+D+
Sbjct: 147 SDFGLSRYVLDDEYTSSRGSKFPVR----------------WSPPEVLM-YSKFSSKSDI 189
Query: 662 YSLGIVFFELWHPFSTAMER 681
++ G++ +E++ ER
Sbjct: 190 WAFGVLMWEIYSLGKMPYER 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 538 LYIQMEYCP--------RTLRQVFESYDHFDKELAW--HLFR---QIVEGLAHIHGQGII 584
L + +E+C R+ R F Y K+ HL Q+ +G+ + + I
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI 166
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLAK 610
HRDL NI +N +KI DFGLA+
Sbjct: 167 HRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 63/261 (24%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
D L+ LG G FG V+ K G++ A+K I+ S D + E + L H
Sbjct: 24 KDLTFLKELGTGQFG--VVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSH 78
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
+ +V+ Y GV + +A+ N YL
Sbjct: 79 EKLVQLY------GVCTKQRPIFIITEYMANGCLLN------------------YL---- 110
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602
R +R F++ + + + + E + ++ + +HRDL N + + +K
Sbjct: 111 ----REMRHRFQTQQLLE------MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 160
Query: 603 IGDFGLAKFL--KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKAD 660
+ DFGL++++ E + FP ++ PE+ + K K+D
Sbjct: 161 VSDFGLSRYVLDDEETSSVGSKFPVR----------------WSPPEVLM-YSKFSSKSD 203
Query: 661 MYSLGIVFFELWHPFSTAMER 681
+++ G++ +E++ ER
Sbjct: 204 IWAFGVLMWEIYSLGKMPYER 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ + + IHRDL NI +N +KI DFGLA+
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 101/260 (38%), Gaps = 61/260 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
D L+ LG G FG V+ K G++ K+ +K+ S+ D + E + L H+
Sbjct: 4 KDLTFLKELGTGQFG--VVKYGKWRGQYDVAIKM-IKEGSMS-EDEFIEEAKVMMNLSHE 59
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+V+ Y GV + +A+ N YL
Sbjct: 60 KLVQLY------GVCTKQRPIFIITEYMANGCLLN------------------YL----- 90
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
R +R F++ + + + + E + ++ + +HRDL N + + +K+
Sbjct: 91 ---REMRHRFQTQQLLE------MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 141
Query: 604 GDFGLAKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
DFGL++++ ++ FP ++ PE+ + K K+D+
Sbjct: 142 SDFGLSRYVLDDEYTSSVGSKFPVR----------------WSPPEVLM-YSKFSSKSDI 184
Query: 662 YSLGIVFFELWHPFSTAMER 681
++ G++ +E++ ER
Sbjct: 185 WAFGVLMWEIYSLGKMPYER 204
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ Q IHRDL N+ N ++I DFGLA+
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA----A 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++ A
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 176 WPVK----------------WYAPEC-INYYKFSSKSDVWSFGVL---MWEAFS 209
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 101/260 (38%), Gaps = 61/260 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
D L+ LG G FG V+ K G++ K+ +K+ S+ D + E + L H+
Sbjct: 9 KDLTFLKELGTGQFG--VVKYGKWRGQYDVAIKM-IKEGSMS-EDEFIEEAKVMMNLSHE 64
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+V+ Y GV + +A+ N YL
Sbjct: 65 KLVQLY------GVCTKQRPIFIITEYMANGCLLN------------------YL----- 95
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
R +R F++ + + + + E + ++ + +HRDL N + + +K+
Sbjct: 96 ---REMRHRFQTQQLLE------MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 146
Query: 604 GDFGLAKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
DFGL++++ ++ FP ++ PE+ + K K+D+
Sbjct: 147 SDFGLSRYVLDDEYTSSVGSKFPVR----------------WSPPEVLM-YSKFSSKSDI 189
Query: 662 YSLGIVFFELWHPFSTAMER 681
++ G++ +E++ ER
Sbjct: 190 WAFGVLMWEIYSLGKMPYER 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ----LDQDAA 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++
Sbjct: 122 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 182 WPVK----------------WYAPEC-INYYKFSSKSDVWSFGVL---MWEAFS 215
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 99/265 (37%), Gaps = 57/265 (21%)
Query: 409 DSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 468
D GS + +P +E L+ +G G FG VV + +H A+K +R + + +
Sbjct: 83 DQGS-YVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKR---FHR 138
Query: 469 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 528
+ E+ L L+ Q D D ++M L + TF N + +
Sbjct: 139 QAAEEIRILEHLRKQ---------------DKD-NTMNVIHMLENFTFRNHICMTFE--- 179
Query: 529 QENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588
L S LY ++ + F L I++ L +H IIH DL
Sbjct: 180 ----LLSMNLYELIKK---------NKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDL 226
Query: 589 TPNNIFF--DARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAP 646
P NI R+ IK+ DFG + + FY AP
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCY------------------EHQRVYXXIQSRFYRAP 268
Query: 647 EIEQGWPKIDEKADMYSLGIVFFEL 671
E+ G + DM+SLG + EL
Sbjct: 269 EVILG-ARYGMPIDMWSLGCILAEL 292
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 101/260 (38%), Gaps = 61/260 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
D L+ LG G FG V+ K G++ K+ +K+ S+ D + E + L H+
Sbjct: 15 KDLTFLKELGTGQFG--VVKYGKWRGQYDVAIKM-IKEGSMS-EDEFIEEAKVMMNLSHE 70
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
+V+ Y GV + +A+ N YL
Sbjct: 71 KLVQLY------GVCTKQRPIFIITEYMANGCLLN------------------YL----- 101
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 603
R +R F++ + + + + E + ++ + +HRDL N + + +K+
Sbjct: 102 ---REMRHRFQTQQLLE------MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 152
Query: 604 GDFGLAKFLKLEQLDQDAA--FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADM 661
DFGL++++ ++ FP ++ PE+ + K K+D+
Sbjct: 153 SDFGLSRYVLDDEYTSSVGSKFPVR----------------WSPPEVLM-YSKFSSKSDI 195
Query: 662 YSLGIVFFELWHPFSTAMER 681
++ G++ +E++ ER
Sbjct: 196 WAFGVLMWEIYSLGKMPYER 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ----LDQDAA 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++
Sbjct: 112 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 172 WPVK----------------WYAPEC-INYYKFSSKSDVWSFGVL---MWEAFS 205
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI-KIGDFGLAKFL 612
F Q+V + H H +G++HRD+ NI D R K+ DFG L
Sbjct: 144 FFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL 190
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 82/252 (32%), Gaps = 57/252 (22%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 483
++F LG GGFG V K RL D +L R+ E LQ Q
Sbjct: 38 DNFSNKNILGRGGFGKVY--------------KGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 543
V + G M + L Y Y+
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLL-----------------------VYPYMANG 120
Query: 544 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ---GIIHRDLTPNNIFFDARND 600
LR+ ES D + GLA++H IIHRD+ NI D +
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 601 IKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKA 659
+GDFGLAK + + A + APE + G K EK
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAV--------------RGTIGHIAPEYLSTG--KSSEKT 224
Query: 660 DMYSLGIVFFEL 671
D++ G++ EL
Sbjct: 225 DVFGYGVMLLEL 236
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ----LDQDAA 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++
Sbjct: 110 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 170 WPVK----------------WYAPEC-INYYKFSSKSDVWSFGVL---MWEAFS 203
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ----LDQDAA 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 192 WPVK----------------WYAPEC-INYYKFSSKSDVWSFGVL---MWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ----LDQDAA 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 192 WPVK----------------WYAPEC-INYYKFSSKSDVWSFGVL---MWEAFS 225
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 22/120 (18%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPXXX 627
Q+ E L +H I H D+ P NI + R + IKI +FG A+ QL F
Sbjct: 110 QVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR-----QLKPGDNFRLLF 164
Query: 628 XXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIV 684
Y APE+ Q + DM+SLG + + L +PF +QI+
Sbjct: 165 TAPE-----------YYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 96/253 (37%), Gaps = 59/253 (23%)
Query: 424 NDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 482
++F LG GGFG V K +L DG AVK+++ ++++ + EV +S H
Sbjct: 30 DNFXNKNILGRGGFGKVY--KGRLADGXLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 86
Query: 483 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 542
++++R G M T E L Y Y+
Sbjct: 87 RNLLR------------LRGFCM---------------------TPTERLL--VYPYMAN 111
Query: 543 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ---GIIHRDLTPNNIFFDARN 599
LR+ ES D + GLA++H IIHRD+ NI D
Sbjct: 112 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171
Query: 600 DIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEK 658
+ +GDFGLAK + + A + APE + G K EK
Sbjct: 172 EAVVGDFGLAKLMDYKDXHVXXAVRGXIG--------------HIAPEYLSTG--KSSEK 215
Query: 659 ADMYSLGIVFFEL 671
D++ G++ EL
Sbjct: 216 TDVFGYGVMLLEL 228
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 22/107 (20%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK-FLKLE----QLDQDAAFP 624
Q+ G+ ++ Q +HRDL N D +K+ DFGLA+ L E Q + A P
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 625 XXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
+TA E Q + + K+D++S G++ +EL
Sbjct: 192 VK----------------WTALESLQTY-RFTTKSDVWSFGVLLWEL 221
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ----LDQDAA 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++
Sbjct: 130 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 190 WPVK----------------WYAPEC-INYYKFSSKSDVWSFGVL---MWEAFS 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ----LDQDAA 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 176 WPVK----------------WYAPEC-INYYKFSSKSDVWSFGVL---MWEAFS 209
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 613
Q+ +G+A + + IHRDL NI KI DFGLA+ +K
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIK 219
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
L Q+ G+ ++ + +HRDL N+ R+ KI DFGL+K L
Sbjct: 115 LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+
Sbjct: 143 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+
Sbjct: 151 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+
Sbjct: 147 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHR+L N + +K+ DFGL++ + + A F
Sbjct: 322 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 381
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 382 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+
Sbjct: 150 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHR+L N + +K+ DFGL++ + + A F
Sbjct: 319 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 378
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 379 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 42/168 (25%)
Query: 547 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 606
RT++ E D HL QI G+ ++ ++H+DL N+ + ++KI D
Sbjct: 119 RTVKSALEPPDFV------HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDL 172
Query: 607 GLAKFL---KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMY 662
GL + + +L ++ P + APE I G ID +D++
Sbjct: 173 GLFREVYAADYYKLLGNSLLPIR----------------WMAPEAIMYGKFSID--SDIW 214
Query: 663 SLGIVFFELWHPFSTAME------RQIVLSDLKQKGELP-----PSWV 699
S G+V LW FS ++ Q V+ ++ + LP P+WV
Sbjct: 215 SYGVV---LWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWV 259
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 133 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 42/168 (25%)
Query: 547 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 606
RT++ E D HL QI G+ ++ ++H+DL N+ + ++KI D
Sbjct: 136 RTVKSALEPPDFV------HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDL 189
Query: 607 GLAKFL---KLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPE-IEQGWPKIDEKADMY 662
GL + + +L ++ P + APE I G ID +D++
Sbjct: 190 GLFREVYAADYYKLLGNSLLPIR----------------WMAPEAIMYGKFSID--SDIW 231
Query: 663 SLGIVFFELWHPFSTAME------RQIVLSDLKQKGELP-----PSWV 699
S G+V LW FS ++ Q V+ ++ + LP P+WV
Sbjct: 232 SYGVV---LWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWV 276
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 160 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+
Sbjct: 199 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 138 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHRDL N + +K+ DFGL++ + + A F
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF 193
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K+D+++ G++ +E+
Sbjct: 194 PIK----------------WTAPE-SLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 136 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--F 623
++ QI + ++ + IHR+L N + +K+ DFGL++ + + A F
Sbjct: 361 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 420
Query: 624 PXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 671
P +TAPE + K K+D+++ G++ +E+
Sbjct: 421 PIK----------------WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 139 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
Q+ +G+ ++ + +HRDL N D + +K+ DFGLA+
Sbjct: 159 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLE 615
F + A + + I E + ++H I HRD+ P N+ + ++ +K+ DFG AK E
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173
Query: 616 QLDQDA 621
+ D+
Sbjct: 174 KYDKSC 179
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ----LDQDAA 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++
Sbjct: 475 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 535 WPVK----------------WYAPECIN-YYKFSSKSDVWSFGVL---MWEAFS 568
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 41/206 (19%)
Query: 417 LPSSRYLNDFEE--------LQPLGHGGFGHVVL--CKNKLDGRHYAVKKIRLKDKSLPV 466
PSS Y+ D E L+ LG G FG V ++ + G ++ ++S +
Sbjct: 2 FPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 467 NDRI--LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 524
+RI L E + + HVVR G + G L S S R +
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 525 DVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 584
+ G+ P TL+++ + + +I +G+A+++ + +
Sbjct: 121 N-PGRP---------------PPTLQEMIQ------------MAAEIADGMAYLNAKKFV 152
Query: 585 HRDLTPNNIFFDARNDIKIGDFGLAK 610
HRDL N +KIGDFG+ +
Sbjct: 153 HRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ----LDQDAA 622
L Q+ G+ ++ +HRDL N+ ++ KI DFGL+K L+ ++
Sbjct: 474 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 623 FPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 676
+P + APE + K K+D++S G++ +W FS
Sbjct: 534 WPVK----------------WYAPECINYY-KFSSKSDVWSFGVL---MWEAFS 567
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 613
Q+ +G+A + + IHRDL NI KI DFGLA+ +K
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 214
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 613
Q+ +G+A + + IHRDL NI KI DFGLA+ +K
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 212
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 613
Q+ +G+A + + IHRDL NI KI DFGLA+ +K
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 219
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 53/209 (25%)
Query: 408 VDSGSPNMSLPS-SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV 466
VD G+ N+ S S + L+ +G GG V N+ + YA+K + L++
Sbjct: 11 VDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQT 69
Query: 467 NDRILREVATLSRLQHQH---VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 523
D E+A L++LQ QH ++R Y D++
Sbjct: 70 LDSYRNEIAYLNKLQ-QHSDKIIRLY---------DYE---------------------- 97
Query: 524 ADVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHG 580
+T Q Y+Y+ ME L + S D ++++ W + ++E + IH
Sbjct: 98 --ITDQ-------YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW---KNMLEAVHTIHQ 145
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLA 609
GI+H DL P N F +K+ DFG+A
Sbjct: 146 HGIVHSDLKPAN-FLIVDGMLKLIDFGIA 173
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 613
Q+ +G+A + + IHRDL NI KI DFGLA+ +K
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 196
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
QI +G+ ++ G++HR+L N+ + + +++ DFG+A L
Sbjct: 141 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 183
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 53/209 (25%)
Query: 408 VDSGSPNMSLPS-SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV 466
VD G+ N+ S S + L+ +G GG V N+ + YA+K + L++
Sbjct: 11 VDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQT 69
Query: 467 NDRILREVATLSRLQHQH---VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 523
D E+A L++LQ QH ++R Y D++
Sbjct: 70 LDSYRNEIAYLNKLQ-QHSDKIIRLY---------DYE---------------------- 97
Query: 524 ADVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHG 580
+T Q Y+Y+ ME L + S D ++++ W + ++E + IH
Sbjct: 98 --ITDQ-------YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW---KNMLEAVHTIHQ 145
Query: 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLA 609
GI+H DL P N F +K+ DFG+A
Sbjct: 146 HGIVHSDLKPAN-FLIVDGMLKLIDFGIA 173
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
RQ+ G+A++ + +HRDL N +KI DFGL++
Sbjct: 181 RQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612
QI +G+ ++ G++HR+L N+ + + +++ DFG+A L
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+I +G+A+++ +HRDL N +KIGDFG+ +
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+I +G+A+++ +HRDL N +KIGDFG+ +
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+I +G+A+++ +HRDL N +KIGDFG+ +
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+I +G+A+++ +HRDL N +KIGDFG+ +
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+I +G+A+++ +HRDL N +KIGDFG+ +
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+I +G+A+++ +HRDL N +KIGDFG+ +
Sbjct: 136 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+I +G+A+++ +HRDL N +KIGDFG+ +
Sbjct: 137 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 610
+I +G+A+++ +HRDL N +KIGDFG+ +
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,926,208
Number of Sequences: 62578
Number of extensions: 1509033
Number of successful extensions: 5438
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 3087
Number of HSP's gapped (non-prelim): 2029
length of query: 1239
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1129
effective length of database: 8,089,757
effective search space: 9133335653
effective search space used: 9133335653
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)