Query 000880
Match_columns 1239
No_of_seqs 782 out of 4512
Neff 7.5
Searched_HMMs 46136
Date Tue Apr 2 00:36:22 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000880.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000880hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1035 eIF-2alpha kinase GCN2 100.0 3.8E-93 8.2E-98 866.3 51.5 1117 29-1228 5-1350(1351)
2 COG0124 HisS Histidyl-tRNA syn 100.0 1.4E-74 3E-79 670.8 39.1 408 783-1228 6-428 (429)
3 KOG1936 Histidyl-tRNA syntheta 100.0 1.2E-73 2.6E-78 628.1 36.2 428 781-1229 60-516 (518)
4 PLN02972 Histidyl-tRNA synthet 100.0 2.1E-71 4.5E-76 674.4 47.1 416 782-1229 328-761 (763)
5 PLN02530 histidine-tRNA ligase 100.0 7.7E-67 1.7E-71 631.5 42.1 403 782-1220 71-486 (487)
6 PRK12420 histidyl-tRNA synthet 100.0 1.6E-64 3.4E-69 604.7 41.2 402 782-1220 5-422 (423)
7 CHL00201 syh histidine-tRNA sy 100.0 1.2E-62 2.6E-67 587.5 40.4 402 782-1236 5-426 (430)
8 PRK12292 hisZ ATP phosphoribos 100.0 3.3E-60 7.2E-65 560.9 40.3 360 782-1186 4-378 (391)
9 PRK12421 ATP phosphoribosyltra 100.0 6.2E-58 1.3E-62 539.0 39.1 362 782-1195 8-384 (392)
10 TIGR00442 hisS histidyl-tRNA s 100.0 1.6E-56 3.4E-61 533.6 39.5 380 783-1210 2-397 (397)
11 PRK00037 hisS histidyl-tRNA sy 100.0 7.7E-56 1.7E-60 530.5 36.9 381 782-1228 5-411 (412)
12 TIGR00443 hisZ_biosyn_reg ATP 100.0 3.2E-52 6.9E-57 479.5 32.0 300 788-1122 1-313 (314)
13 PRK12295 hisZ ATP phosphoribos 100.0 1.7E-51 3.8E-56 479.0 33.2 305 796-1120 5-370 (373)
14 PF13393 tRNA-synt_His: Histid 100.0 2.6E-50 5.7E-55 465.1 28.4 297 786-1117 1-311 (311)
15 PRK12293 hisZ ATP phosphoribos 100.0 3.4E-48 7.3E-53 435.7 30.0 268 782-1121 6-279 (281)
16 KOG0615 Serine/threonine prote 100.0 3.8E-48 8.3E-53 428.4 18.3 260 422-737 170-445 (475)
17 COG3705 HisZ ATP phosphoribosy 100.0 2.9E-47 6.3E-52 433.5 25.3 368 782-1195 4-381 (390)
18 KOG0598 Ribosomal protein S6 k 100.0 5.1E-47 1.1E-51 418.5 22.1 263 421-741 22-293 (357)
19 KOG0575 Polo-like serine/threo 100.0 1.4E-46 3E-51 436.1 25.2 251 424-733 18-273 (592)
20 KOG0581 Mitogen-activated prot 100.0 1.1E-46 2.5E-51 415.7 21.3 258 420-737 75-343 (364)
21 cd00773 HisRS-like_core Class 100.0 3.7E-45 8.1E-50 410.9 27.6 249 794-1121 1-260 (261)
22 KOG0595 Serine/threonine-prote 100.0 2E-45 4.3E-50 408.3 21.9 259 421-736 7-275 (429)
23 KOG0592 3-phosphoinositide-dep 100.0 1.4E-45 3E-50 420.2 21.0 274 420-739 69-348 (604)
24 KOG0616 cAMP-dependent protein 100.0 1E-45 2.2E-50 394.0 18.5 257 422-740 42-308 (355)
25 KOG0605 NDR and related serine 100.0 4E-45 8.7E-50 417.6 22.0 278 422-742 139-458 (550)
26 KOG0591 NIMA (never in mitosis 100.0 2.3E-46 4.9E-51 395.3 8.0 249 423-728 18-280 (375)
27 KOG0593 Predicted protein kina 100.0 9.9E-45 2.1E-49 386.5 15.4 258 423-735 1-290 (396)
28 KOG0661 MAPK related serine/th 100.0 2.5E-44 5.5E-49 404.3 13.7 261 420-736 6-298 (538)
29 KOG0694 Serine/threonine prote 100.0 2.3E-43 5E-48 413.1 22.0 264 420-742 364-637 (694)
30 KOG0600 Cdc2-related protein k 100.0 2E-43 4.3E-48 399.8 19.4 268 417-736 110-407 (560)
31 KOG0582 Ste20-like serine/thre 100.0 1E-42 2.2E-47 388.6 22.4 264 422-737 24-301 (516)
32 KOG0597 Serine-threonine prote 100.0 3.2E-43 6.9E-48 399.2 17.4 254 423-735 1-257 (808)
33 KOG0659 Cdk activating kinase 100.0 9.3E-43 2E-47 366.6 19.2 259 424-737 2-289 (318)
34 KOG0583 Serine/threonine prote 100.0 5.7E-42 1.2E-46 400.7 25.6 256 421-734 14-280 (370)
35 KOG0663 Protein kinase PITSLRE 100.0 1.5E-42 3.2E-47 374.5 18.3 269 417-738 69-370 (419)
36 KOG0588 Serine/threonine prote 100.0 3.7E-42 8.1E-47 398.9 19.8 257 422-737 10-271 (786)
37 KOG0192 Tyrosine kinase specif 100.0 1.4E-41 3E-46 394.0 23.9 248 424-728 41-298 (362)
38 KOG0660 Mitogen-activated prot 100.0 7E-42 1.5E-46 376.3 18.4 275 425-759 23-328 (359)
39 KOG0198 MEKK and related serin 100.0 1.2E-41 2.6E-46 383.3 20.3 261 424-737 17-284 (313)
40 KOG0610 Putative serine/threon 100.0 1.1E-41 2.4E-46 378.0 19.6 278 423-742 76-405 (459)
41 KOG0033 Ca2+/calmodulin-depend 100.0 3.5E-43 7.6E-48 364.1 6.7 260 421-737 8-275 (355)
42 KOG0585 Ca2+/calmodulin-depend 100.0 1.7E-41 3.6E-46 380.6 18.5 268 419-735 92-378 (576)
43 TIGR00418 thrS threonyl-tRNA s 100.0 4.5E-40 9.7E-45 408.7 31.8 348 783-1226 188-561 (563)
44 PRK12294 hisZ ATP phosphoribos 100.0 5.9E-40 1.3E-44 364.6 26.6 255 794-1092 6-268 (272)
45 KOG0578 p21-activated serine/t 100.0 4.5E-41 9.8E-46 387.5 17.6 253 424-735 273-529 (550)
46 KOG0611 Predicted serine/threo 100.0 8.3E-41 1.8E-45 365.9 15.8 251 423-733 52-307 (668)
47 KOG0599 Phosphorylase kinase g 100.0 4.5E-41 9.6E-46 352.9 12.4 259 422-736 15-290 (411)
48 cd05612 STKc_PRKX_like Catalyt 100.0 9.9E-40 2.1E-44 373.5 23.8 254 424-739 1-264 (291)
49 PTZ00263 protein kinase A cata 100.0 9.1E-40 2E-44 380.7 23.6 259 420-740 14-282 (329)
50 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.6E-39 7.7E-44 368.3 26.8 254 423-732 4-288 (288)
51 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.9E-39 8.5E-44 375.8 26.7 265 425-736 1-297 (338)
52 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4E-39 8.7E-44 370.5 26.2 259 423-737 4-296 (303)
53 KOG0201 Serine/threonine prote 100.0 4.1E-41 9E-46 376.3 7.4 252 425-736 14-270 (467)
54 KOG0594 Protein kinase PCTAIRE 100.0 1.8E-39 3.9E-44 359.1 20.4 266 423-737 10-310 (323)
55 cd07848 STKc_CDKL5 Catalytic d 100.0 6.2E-39 1.3E-43 365.3 25.2 254 424-732 1-287 (287)
56 KOG0589 Serine/threonine prote 100.0 7.4E-40 1.6E-44 376.9 17.0 254 423-733 3-262 (426)
57 cd05571 STKc_PKB Catalytic dom 100.0 3.9E-39 8.5E-44 374.3 22.8 251 430-739 1-261 (323)
58 KOG0612 Rho-associated, coiled 100.0 2.6E-40 5.6E-45 401.7 13.1 279 423-757 74-370 (1317)
59 PTZ00426 cAMP-dependent protei 100.0 6.6E-39 1.4E-43 375.0 24.5 258 420-739 26-294 (340)
60 KOG0580 Serine/threonine prote 100.0 6.5E-40 1.4E-44 340.9 13.5 254 421-735 19-279 (281)
61 cd05628 STKc_NDR1 Catalytic do 100.0 1.7E-38 3.7E-43 375.1 26.7 275 424-741 1-305 (363)
62 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.5E-38 3.2E-43 370.9 25.6 258 424-740 1-268 (333)
63 KOG0197 Tyrosine kinases [Sign 100.0 4.3E-39 9.3E-44 371.3 18.9 243 424-727 206-455 (468)
64 cd05626 STKc_LATS2 Catalytic d 100.0 3.2E-38 7E-43 375.2 26.8 273 425-738 2-314 (381)
65 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.6E-38 3.4E-43 372.9 23.7 275 424-741 1-297 (350)
66 KOG0032 Ca2+/calmodulin-depend 100.0 3.4E-38 7.5E-43 368.7 25.5 258 420-735 31-299 (382)
67 cd05631 STKc_GRK4 Catalytic do 100.0 3.4E-38 7.3E-43 359.7 24.8 258 425-741 1-273 (285)
68 cd05599 STKc_NDR_like Catalyti 100.0 3.3E-38 7.1E-43 372.6 25.5 275 424-740 1-307 (364)
69 KOG0579 Ste20-like serine/thre 100.0 8.2E-40 1.8E-44 372.8 11.0 256 424-736 32-296 (1187)
70 cd07862 STKc_CDK6 Catalytic do 100.0 5.5E-38 1.2E-42 358.1 26.0 257 424-732 1-290 (290)
71 cd05585 STKc_YPK1_like Catalyt 100.0 3.6E-38 7.9E-43 364.4 24.1 248 432-738 1-256 (312)
72 PRK00413 thrS threonyl-tRNA sy 100.0 6.1E-39 1.3E-43 404.5 19.1 358 779-1231 254-635 (638)
73 cd05629 STKc_NDR_like_fungal C 100.0 3.7E-38 7.9E-43 374.1 24.4 275 424-740 1-316 (377)
74 cd05593 STKc_PKB_gamma Catalyt 100.0 5.1E-38 1.1E-42 365.8 23.9 251 430-739 1-261 (328)
75 cd05595 STKc_PKB_beta Catalyti 100.0 4.8E-38 1E-42 365.2 23.6 251 430-739 1-261 (323)
76 PTZ00036 glycogen synthase kin 100.0 6E-38 1.3E-42 379.2 25.1 258 424-735 66-357 (440)
77 PHA03212 serine/threonine kina 100.0 6.5E-38 1.4E-42 373.2 25.0 252 422-736 90-383 (391)
78 cd05625 STKc_LATS1 Catalytic d 100.0 7E-38 1.5E-42 372.4 24.9 272 425-738 2-314 (382)
79 cd07876 STKc_JNK2 Catalytic do 100.0 1.1E-37 2.4E-42 367.4 26.1 260 422-734 19-320 (359)
80 KOG0690 Serine/threonine prote 100.0 4.4E-39 9.4E-44 344.5 11.9 285 422-767 166-460 (516)
81 cd05598 STKc_LATS Catalytic do 100.0 5.7E-38 1.2E-42 372.3 22.6 275 424-740 1-312 (376)
82 cd07853 STKc_NLK Catalytic dom 100.0 1.2E-37 2.5E-42 369.2 25.0 263 425-736 1-295 (372)
83 KOG0658 Glycogen synthase kina 100.0 1.5E-38 3.2E-43 350.7 15.5 255 425-736 25-313 (364)
84 cd05627 STKc_NDR2 Catalytic do 100.0 1.2E-37 2.5E-42 367.5 24.3 275 424-741 1-305 (360)
85 cd07863 STKc_CDK4 Catalytic do 100.0 2.6E-37 5.6E-42 352.0 26.2 256 425-732 1-288 (288)
86 cd05587 STKc_cPKC Catalytic do 100.0 1.7E-37 3.8E-42 360.6 25.1 257 425-740 1-268 (324)
87 cd05601 STKc_CRIK Catalytic do 100.0 7.4E-38 1.6E-42 364.5 21.8 264 424-742 1-276 (330)
88 cd06649 PKc_MEK2 Catalytic dom 100.0 3.5E-37 7.5E-42 359.2 27.0 254 423-736 4-308 (331)
89 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-37 2.6E-42 361.4 22.8 251 430-739 1-263 (320)
90 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.1E-37 2.5E-42 364.9 22.4 261 423-736 14-305 (343)
91 KOG4717 Serine/threonine prote 100.0 2.5E-38 5.4E-43 354.8 15.9 258 421-737 15-278 (864)
92 cd07874 STKc_JNK3 Catalytic do 100.0 2.1E-37 4.5E-42 364.6 24.5 261 422-735 15-317 (355)
93 cd07875 STKc_JNK1 Catalytic do 100.0 2.6E-37 5.5E-42 365.1 25.4 260 422-734 22-323 (364)
94 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.4E-37 7.4E-42 355.5 25.7 258 423-736 5-293 (309)
95 cd05596 STKc_ROCK Catalytic do 100.0 2.1E-37 4.6E-42 366.6 24.1 262 423-739 42-314 (370)
96 PRK12305 thrS threonyl-tRNA sy 100.0 5.8E-37 1.3E-41 381.5 29.2 350 782-1230 193-571 (575)
97 cd05616 STKc_cPKC_beta Catalyt 100.0 2.9E-37 6.2E-42 358.6 24.8 257 425-740 1-268 (323)
98 cd05591 STKc_nPKC_epsilon Cata 100.0 1.9E-37 4.1E-42 359.8 23.2 252 430-740 1-265 (321)
99 KOG0195 Integrin-linked kinase 100.0 3.6E-39 7.9E-44 337.9 7.8 340 295-727 85-440 (448)
100 cd05614 STKc_MSK2_N N-terminal 100.0 3.4E-37 7.4E-42 359.2 25.1 259 425-740 1-278 (332)
101 KOG0577 Serine/threonine prote 100.0 1.5E-38 3.2E-43 361.7 12.4 249 426-734 28-283 (948)
102 cd05594 STKc_PKB_alpha Catalyt 100.0 1.3E-37 2.7E-42 362.0 20.6 251 430-739 1-262 (325)
103 PTZ00284 protein kinase; Provi 100.0 3.6E-37 7.9E-42 375.8 25.5 252 423-735 128-444 (467)
104 KOG0574 STE20-like serine/thre 100.0 9.8E-40 2.1E-44 346.0 2.2 251 424-737 33-291 (502)
105 cd05589 STKc_PKN Catalytic dom 100.0 4.5E-37 9.8E-42 357.1 24.3 254 426-739 1-267 (324)
106 cd05621 STKc_ROCK2 Catalytic d 100.0 3.9E-37 8.4E-42 364.2 24.1 261 423-738 42-313 (370)
107 cd05584 STKc_p70S6K Catalytic 100.0 4.5E-37 9.7E-42 357.1 23.9 250 430-738 2-265 (323)
108 cd05592 STKc_nPKC_theta_delta 100.0 4.3E-37 9.2E-42 356.2 23.5 252 430-740 1-259 (316)
109 cd05588 STKc_aPKC Catalytic do 100.0 4.8E-37 1E-41 357.8 23.9 252 430-740 1-273 (329)
110 cd05620 STKc_nPKC_delta Cataly 100.0 4.6E-37 1E-41 355.9 23.3 252 430-740 1-259 (316)
111 KOG0193 Serine/threonine prote 100.0 1.6E-37 3.5E-42 358.3 19.0 248 424-728 392-648 (678)
112 PRK12444 threonyl-tRNA synthet 100.0 1.7E-36 3.8E-41 380.2 30.1 350 783-1230 262-637 (639)
113 KOG4721 Serine/threonine prote 100.0 1.7E-38 3.6E-43 360.0 10.3 237 425-730 125-365 (904)
114 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.7E-37 1.2E-41 358.2 23.7 250 424-728 7-329 (338)
115 PTZ00283 serine/threonine prot 100.0 1.3E-36 2.7E-41 372.2 27.7 267 423-737 31-305 (496)
116 cd05597 STKc_DMPK_like Catalyt 100.0 1E-36 2.3E-41 355.2 25.7 264 424-741 1-278 (331)
117 cd05582 STKc_RSK_N N-terminal 100.0 2.2E-37 4.7E-42 358.8 19.8 251 430-739 2-264 (318)
118 cd05570 STKc_PKC Catalytic dom 100.0 5.9E-37 1.3E-41 355.3 23.4 252 430-740 1-263 (318)
119 cd05618 STKc_aPKC_iota Catalyt 100.0 7.5E-37 1.6E-41 356.2 24.0 253 430-741 1-274 (329)
120 cd05615 STKc_cPKC_alpha Cataly 100.0 1E-36 2.2E-41 354.2 24.9 258 425-741 1-269 (323)
121 cd07861 STKc_CDK1_euk Catalyti 100.0 1.6E-36 3.5E-41 344.6 26.0 253 425-732 1-285 (285)
122 cd07839 STKc_CDK5 Catalytic do 100.0 7.6E-37 1.6E-41 347.4 23.3 253 425-732 1-284 (284)
123 cd05622 STKc_ROCK1 Catalytic d 100.0 9.2E-37 2E-41 361.2 24.8 262 423-739 42-314 (371)
124 cd05619 STKc_nPKC_theta Cataly 100.0 8.1E-37 1.8E-41 353.9 23.5 252 430-740 1-259 (316)
125 cd05575 STKc_SGK Catalytic dom 100.0 5.8E-37 1.3E-41 356.1 22.3 251 430-739 1-261 (323)
126 cd05623 STKc_MRCK_alpha Cataly 100.0 1.2E-36 2.7E-41 354.7 24.9 264 424-741 1-278 (332)
127 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.2E-36 4.9E-41 347.2 26.6 258 423-736 5-293 (301)
128 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-36 2.9E-41 345.6 23.9 249 432-739 1-267 (280)
129 cd06650 PKc_MEK1 Catalytic dom 100.0 2.2E-36 4.7E-41 352.9 25.9 255 423-736 4-306 (333)
130 cd07868 STKc_CDK8 Catalytic do 100.0 1.8E-36 3.9E-41 350.4 24.9 249 430-732 7-317 (317)
131 PHA03209 serine/threonine kina 100.0 1.4E-36 3E-41 358.0 24.3 247 424-735 66-357 (357)
132 cd05624 STKc_MRCK_beta Catalyt 100.0 1.6E-36 3.5E-41 353.7 24.4 264 424-741 1-278 (331)
133 PTZ00266 NIMA-related protein 100.0 2.1E-36 4.6E-41 380.8 26.8 262 419-736 8-302 (1021)
134 cd05605 STKc_GRK4_like Catalyt 100.0 2.6E-36 5.6E-41 344.1 25.2 257 425-740 1-272 (285)
135 PLN00034 mitogen-activated pro 100.0 2.4E-36 5.1E-41 355.4 25.0 253 422-735 72-334 (353)
136 cd05586 STKc_Sck1_like Catalyt 100.0 7.6E-37 1.6E-41 356.1 20.3 252 432-740 1-264 (330)
137 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.3E-36 5.1E-41 351.7 23.9 253 430-741 1-272 (327)
138 KOG0696 Serine/threonine prote 100.0 2.6E-37 5.6E-42 339.2 14.5 264 420-742 345-619 (683)
139 cd05604 STKc_SGK3 Catalytic do 100.0 1.3E-36 2.7E-41 353.6 21.3 252 430-740 1-262 (325)
140 KOG4279 Serine/threonine prote 100.0 1.8E-37 3.9E-42 357.3 13.4 248 431-735 582-838 (1226)
141 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-35 2.5E-40 333.4 27.2 255 424-732 2-263 (263)
142 KOG0986 G protein-coupled rece 100.0 2.6E-37 5.6E-42 344.5 13.5 259 423-741 184-458 (591)
143 cd05603 STKc_SGK2 Catalytic do 100.0 2.1E-36 4.5E-41 351.0 21.6 250 430-738 1-260 (321)
144 cd05602 STKc_SGK1 Catalytic do 100.0 2.1E-36 4.6E-41 351.7 21.5 251 430-739 1-261 (325)
145 PF00069 Pkinase: Protein kina 100.0 1.3E-36 2.8E-41 339.9 18.7 252 426-732 1-260 (260)
146 cd08223 STKc_Nek4 Catalytic do 100.0 2E-35 4.3E-40 330.3 27.5 251 425-732 1-257 (257)
147 cd07865 STKc_CDK9 Catalytic do 100.0 1.9E-35 4E-40 339.9 28.0 271 419-732 7-310 (310)
148 cd08529 STKc_FA2-like Catalyti 100.0 1.9E-35 4.1E-40 330.0 27.0 250 425-732 1-256 (256)
149 PTZ00267 NIMA-related protein 100.0 9.7E-36 2.1E-40 363.9 26.3 254 424-735 67-329 (478)
150 cd07845 STKc_CDK10 Catalytic d 100.0 1.4E-35 3E-40 341.9 26.1 263 421-736 4-297 (309)
151 cd07860 STKc_CDK2_3 Catalytic 100.0 1.3E-35 2.7E-40 337.4 25.2 253 425-732 1-284 (284)
152 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.6E-35 3.6E-40 336.3 26.1 254 424-732 1-286 (286)
153 PHA03207 serine/threonine kina 100.0 1.3E-35 2.8E-40 354.2 26.0 257 423-740 91-386 (392)
154 cd05607 STKc_GRK7 Catalytic do 100.0 1.2E-35 2.6E-40 337.3 24.3 249 432-738 1-263 (277)
155 KOG0586 Serine/threonine prote 100.0 2.3E-36 4.9E-41 351.5 18.4 257 420-735 52-312 (596)
156 cd07867 STKc_CDC2L6 Catalytic 100.0 2E-35 4.3E-40 341.5 26.2 249 430-732 7-317 (317)
157 PHA02988 hypothetical protein; 100.0 1.5E-35 3.2E-40 337.8 24.8 243 430-729 26-275 (283)
158 PHA03211 serine/threonine kina 100.0 1.4E-35 3.1E-40 358.0 25.9 249 423-734 168-460 (461)
159 cd05580 STKc_PKA Catalytic dom 100.0 3.3E-35 7.2E-40 335.6 26.3 255 424-740 1-265 (290)
160 cd05609 STKc_MAST Catalytic do 100.0 6.2E-35 1.3E-39 336.0 28.3 275 424-739 1-283 (305)
161 cd07843 STKc_CDC2L1 Catalytic 100.0 2E-35 4.4E-40 337.6 24.1 257 423-732 4-293 (293)
162 cd07855 STKc_ERK5 Catalytic do 100.0 1.4E-35 3E-40 346.1 23.0 267 424-737 5-302 (334)
163 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-35 5E-40 343.2 24.8 264 428-739 2-317 (327)
164 KOG0667 Dual-specificity tyros 100.0 6E-36 1.3E-40 351.8 19.9 250 425-736 187-509 (586)
165 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.1E-35 6.6E-40 333.8 25.1 256 424-738 1-270 (283)
166 cd06615 PKc_MEK Catalytic doma 100.0 3.6E-35 7.8E-40 338.7 26.0 252 424-735 1-293 (308)
167 cd06631 STKc_YSK4 Catalytic do 100.0 5.9E-35 1.3E-39 328.4 26.6 257 425-732 1-265 (265)
168 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-35 4.6E-40 332.4 23.0 251 423-731 8-267 (267)
169 cd06619 PKc_MKK5 Catalytic dom 100.0 4.6E-35 1E-39 332.6 25.9 251 424-737 1-261 (279)
170 cd06651 STKc_MEKK3 Catalytic d 100.0 5.9E-35 1.3E-39 329.0 26.5 257 424-733 2-265 (266)
171 KOG0608 Warts/lats-like serine 100.0 4E-36 8.7E-41 343.9 17.0 292 424-758 629-961 (1034)
172 cd06652 STKc_MEKK2 Catalytic d 100.0 8.9E-35 1.9E-39 327.2 27.8 257 424-733 2-265 (265)
173 cd06637 STKc_TNIK Catalytic do 100.0 4.7E-35 1E-39 330.3 25.4 256 424-732 6-272 (272)
174 cd07850 STKc_JNK Catalytic dom 100.0 2.5E-35 5.5E-40 346.7 24.1 259 423-734 15-316 (353)
175 cd07837 STKc_CdkB_plant Cataly 100.0 4.5E-35 9.8E-40 334.7 25.4 260 424-733 1-295 (295)
176 cd05574 STKc_phototropin_like 100.0 7.3E-35 1.6E-39 336.9 27.2 275 424-740 1-300 (316)
177 cd05632 STKc_GRK5 Catalytic do 100.0 6.3E-35 1.4E-39 332.8 26.1 257 426-739 2-271 (285)
178 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7.2E-35 1.6E-39 327.1 26.2 257 424-732 1-267 (267)
179 cd07832 STKc_CCRK Catalytic do 100.0 7.5E-35 1.6E-39 330.9 26.5 255 425-733 1-286 (286)
180 cd05096 PTKc_DDR1 Catalytic do 100.0 5.4E-35 1.2E-39 336.3 25.5 250 424-728 5-300 (304)
181 cd05630 STKc_GRK6 Catalytic do 100.0 4.3E-35 9.3E-40 334.2 24.2 255 425-738 1-270 (285)
182 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.7E-35 8E-40 333.7 23.6 254 424-732 1-286 (286)
183 cd06646 STKc_MAP4K5 Catalytic 100.0 4.2E-35 9.2E-40 330.0 23.7 252 423-731 8-267 (267)
184 cd06613 STKc_MAP4K3_like Catal 100.0 8.7E-35 1.9E-39 325.8 26.0 251 424-731 3-262 (262)
185 PLN00009 cyclin-dependent kina 100.0 6.5E-35 1.4E-39 333.6 25.3 259 423-736 1-291 (294)
186 cd06643 STKc_SLK Catalytic dom 100.0 7.2E-35 1.6E-39 331.2 25.5 255 425-736 6-269 (282)
187 cd06644 STKc_STK10_LOK Catalyt 100.0 8.3E-35 1.8E-39 332.6 25.9 257 424-737 12-277 (292)
188 cd06611 STKc_SLK_like Catalyti 100.0 4.6E-35 9.9E-40 332.3 23.6 256 424-736 5-269 (280)
189 KOG0666 Cyclin C-dependent kin 100.0 2.8E-36 6E-41 322.4 12.5 265 421-736 21-344 (438)
190 cd07835 STKc_CDK1_like Catalyt 100.0 6.7E-35 1.5E-39 331.2 24.8 252 426-732 1-283 (283)
191 cd07844 STKc_PCTAIRE_like Cata 100.0 9.8E-35 2.1E-39 331.5 26.2 254 423-732 4-291 (291)
192 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.3E-34 2.8E-39 325.9 26.5 255 426-732 2-267 (267)
193 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-34 2.6E-39 332.4 26.7 254 423-735 19-276 (296)
194 cd05104 PTKc_Kit Catalytic dom 100.0 3.4E-35 7.4E-40 348.4 22.9 251 423-729 34-370 (375)
195 KOG0596 Dual specificity; seri 100.0 1E-35 2.3E-40 339.0 17.4 257 423-736 360-634 (677)
196 cd08221 STKc_Nek9 Catalytic do 100.0 1.9E-34 4.1E-39 322.4 27.4 250 425-732 1-256 (256)
197 cd07849 STKc_ERK1_2_like Catal 100.0 7.7E-35 1.7E-39 340.1 25.2 265 423-736 4-299 (336)
198 cd07841 STKc_CDK7 Catalytic do 100.0 6.9E-35 1.5E-39 333.9 24.4 257 425-736 1-289 (298)
199 cd07866 STKc_BUR1 Catalytic do 100.0 1.4E-34 3E-39 332.9 26.8 275 422-732 6-311 (311)
200 cd06612 STKc_MST1_2 Catalytic 100.0 6.6E-35 1.4E-39 325.6 23.4 249 424-732 3-256 (256)
201 cd08218 STKc_Nek1 Catalytic do 100.0 1.5E-34 3.2E-39 323.3 26.0 250 425-732 1-256 (256)
202 cd05064 PTKc_EphR_A10 Catalyti 100.0 9.2E-35 2E-39 327.7 24.5 247 424-728 5-260 (266)
203 KOG4236 Serine/threonine prote 100.0 4E-36 8.6E-41 337.8 12.9 248 430-736 570-826 (888)
204 cd05106 PTKc_CSF-1R Catalytic 100.0 4.7E-35 1E-39 347.0 22.7 251 423-729 37-368 (374)
205 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2E-34 4.2E-39 329.2 27.0 253 424-732 5-291 (291)
206 KOG0584 Serine/threonine prote 100.0 6.6E-36 1.4E-40 347.7 14.9 256 418-735 37-302 (632)
207 cd08217 STKc_Nek2 Catalytic do 100.0 2.2E-34 4.7E-39 322.3 26.7 252 425-732 1-265 (265)
208 cd06638 STKc_myosinIIIA Cataly 100.0 1.7E-34 3.6E-39 328.5 26.1 257 423-732 17-286 (286)
209 cd06655 STKc_PAK2 Catalytic do 100.0 1.9E-34 4.1E-39 330.8 26.5 253 424-735 19-275 (296)
210 cd07836 STKc_Pho85 Catalytic d 100.0 1.6E-34 3.4E-39 328.1 25.6 252 425-732 1-284 (284)
211 cd05048 PTKc_Ror Catalytic Dom 100.0 9E-35 2E-39 330.2 23.5 250 423-729 4-279 (283)
212 cd06609 STKc_MST3_like Catalyt 100.0 1.3E-34 2.9E-39 327.4 24.5 254 424-737 1-259 (274)
213 KOG0983 Mitogen-activated prot 100.0 1.2E-35 2.7E-40 312.6 14.7 257 423-736 91-356 (391)
214 cd07831 STKc_MOK Catalytic dom 100.0 1.8E-34 3.9E-39 327.2 25.4 251 426-732 1-282 (282)
215 cd08220 STKc_Nek8 Catalytic do 100.0 2.7E-34 5.8E-39 320.7 26.1 249 425-732 1-256 (256)
216 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-34 2.4E-39 339.0 23.9 262 424-735 5-297 (337)
217 KOG0604 MAP kinase-activated p 100.0 5.7E-36 1.2E-40 319.0 11.6 255 422-736 59-329 (400)
218 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.3E-34 5E-39 326.9 25.6 256 424-732 16-282 (282)
219 KOG1026 Nerve growth factor re 100.0 1.5E-35 3.2E-40 356.7 16.6 249 423-728 485-757 (774)
220 KOG0614 cGMP-dependent protein 100.0 1.4E-36 3.1E-41 341.4 7.2 262 423-742 419-690 (732)
221 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.2E-34 2.6E-39 329.9 23.1 255 424-736 1-269 (286)
222 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-34 2.3E-39 325.9 22.4 253 424-736 1-264 (265)
223 cd06608 STKc_myosinIII_like Ca 100.0 2.2E-34 4.9E-39 324.3 25.1 257 424-732 6-275 (275)
224 cd07833 STKc_CDKL Catalytic do 100.0 1.7E-34 3.6E-39 328.4 24.2 255 424-732 1-288 (288)
225 cd05108 PTKc_EGFR Catalytic do 100.0 1.6E-34 3.4E-39 334.5 24.1 249 423-729 6-264 (316)
226 cd06639 STKc_myosinIIIB Cataly 100.0 5.6E-34 1.2E-38 325.4 28.0 258 423-733 21-291 (291)
227 KOG0194 Protein tyrosine kinas 100.0 4.5E-35 9.8E-40 343.5 19.3 249 424-729 157-416 (474)
228 cd06626 STKc_MEKK4 Catalytic d 100.0 6.1E-34 1.3E-38 319.3 27.2 257 425-732 1-264 (264)
229 KOG0607 MAP kinase-interacting 100.0 1.9E-35 4.1E-40 316.7 14.2 270 419-738 72-370 (463)
230 cd06656 STKc_PAK3 Catalytic do 100.0 2.2E-34 4.8E-39 330.3 24.1 255 423-736 18-276 (297)
231 cd06616 PKc_MKK4 Catalytic dom 100.0 1.7E-34 3.7E-39 329.0 22.8 256 424-736 4-274 (288)
232 cd08228 STKc_Nek6 Catalytic do 100.0 4.3E-34 9.4E-39 321.6 25.8 249 424-729 2-261 (267)
233 cd07879 STKc_p38delta_MAPK13 C 100.0 2.4E-34 5.2E-39 336.9 24.6 260 423-736 14-304 (342)
234 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-34 3.1E-39 324.0 21.7 249 425-732 1-258 (258)
235 cd06632 STKc_MEKK1_plant Catal 100.0 4.1E-34 8.9E-39 319.3 25.3 250 426-732 2-258 (258)
236 cd07834 STKc_MAPK Catalytic do 100.0 1.7E-34 3.6E-39 336.0 22.8 265 425-736 1-296 (330)
237 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.2E-34 6.8E-39 336.3 25.1 261 423-736 16-307 (345)
238 cd07840 STKc_CDK9_like Catalyt 100.0 4.5E-34 9.8E-39 324.2 25.6 255 426-732 1-287 (287)
239 PRK13184 pknD serine/threonine 100.0 3.5E-34 7.6E-39 359.7 26.6 266 423-729 1-285 (932)
240 cd07852 STKc_MAPK15 Catalytic 100.0 2.3E-34 4.9E-39 336.2 23.2 266 421-735 4-301 (337)
241 cd06630 STKc_MEKK1 Catalytic d 100.0 4.6E-34 9.9E-39 321.3 24.8 257 425-733 1-268 (268)
242 cd08219 STKc_Nek3 Catalytic do 100.0 6E-34 1.3E-38 318.4 25.6 247 425-730 1-253 (255)
243 KOG0662 Cyclin-dependent kinas 100.0 6.1E-35 1.3E-39 289.9 15.4 257 424-735 2-289 (292)
244 cd05116 PTKc_Syk Catalytic dom 100.0 3.7E-34 8.1E-39 320.8 23.9 243 431-729 2-251 (257)
245 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.2E-34 7E-39 326.4 23.5 252 423-735 4-272 (284)
246 KOG0669 Cyclin T-dependent kin 100.0 2.6E-36 5.6E-41 314.1 5.7 272 422-736 15-322 (376)
247 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.1E-34 1.1E-38 334.3 25.7 261 423-736 14-305 (343)
248 cd06607 STKc_TAO Catalytic dom 100.0 6.7E-34 1.4E-38 327.8 26.1 253 424-736 15-274 (307)
249 cd06623 PKc_MAPKK_plant_like C 100.0 7.1E-34 1.5E-38 318.5 25.6 254 424-735 1-262 (264)
250 cd06624 STKc_ASK Catalytic dom 100.0 8E-34 1.7E-38 320.0 26.1 250 426-732 10-268 (268)
251 cd07842 STKc_CDK8_like Catalyt 100.0 4.5E-34 9.7E-39 329.6 24.5 258 425-732 1-316 (316)
252 cd07864 STKc_CDK12 Catalytic d 100.0 6.1E-34 1.3E-38 326.5 25.5 268 421-732 4-302 (302)
253 cd05054 PTKc_VEGFR Catalytic d 100.0 2.3E-34 4.9E-39 336.5 22.1 251 424-729 7-329 (337)
254 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.4E-33 3E-38 317.5 27.3 255 424-731 2-263 (264)
255 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1E-33 2.2E-38 329.7 27.2 256 423-736 9-295 (328)
256 cd05090 PTKc_Ror1 Catalytic do 100.0 6.7E-34 1.5E-38 323.4 24.8 250 423-729 4-279 (283)
257 cd07857 STKc_MPK1 Catalytic do 100.0 8.2E-34 1.8E-38 330.9 26.1 264 425-735 1-298 (332)
258 cd05633 STKc_GRK3 Catalytic do 100.0 6.5E-34 1.4E-38 323.5 24.7 248 431-738 1-264 (279)
259 cd05114 PTKc_Tec_Rlk Catalytic 100.0 9.3E-34 2E-38 317.2 25.4 245 424-729 4-254 (256)
260 cd08225 STKc_Nek5 Catalytic do 100.0 7.9E-34 1.7E-38 317.1 24.8 250 425-732 1-257 (257)
261 PHA03210 serine/threonine kina 100.0 3.1E-34 6.6E-39 352.1 23.3 265 420-739 144-464 (501)
262 cd05075 PTKc_Axl Catalytic dom 100.0 8.8E-34 1.9E-38 319.9 25.1 253 427-729 2-267 (272)
263 KOG0695 Serine/threonine prote 100.0 6.9E-35 1.5E-39 312.7 15.1 261 423-742 249-529 (593)
264 cd07851 STKc_p38 Catalytic dom 100.0 3.7E-34 8E-39 335.5 22.8 262 422-736 13-305 (343)
265 cd06658 STKc_PAK5 Catalytic do 100.0 2.7E-34 6E-39 328.8 21.0 254 424-736 22-279 (292)
266 cd05572 STKc_cGK_PKG Catalytic 100.0 6.9E-34 1.5E-38 319.2 23.7 248 432-737 1-260 (262)
267 cd06629 STKc_MAPKKK_Bck1_like 100.0 1E-33 2.2E-38 319.7 25.0 255 425-732 2-272 (272)
268 KOG1989 ARK protein kinase fam 100.0 1.8E-34 3.9E-39 349.4 19.9 258 424-729 37-307 (738)
269 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.8E-34 1.5E-38 339.2 24.4 251 423-729 36-393 (400)
270 cd05062 PTKc_IGF-1R Catalytic 100.0 1.1E-33 2.4E-38 320.6 25.0 250 423-729 5-274 (277)
271 PTZ00024 cyclin-dependent prot 100.0 1.2E-33 2.6E-38 329.8 25.9 272 424-736 8-320 (335)
272 KOG4645 MAPKKK (MAP kinase kin 100.0 5.8E-36 1.2E-40 368.2 6.5 252 430-733 1241-1498(1509)
273 cd05109 PTKc_HER2 Catalytic do 100.0 1.1E-33 2.5E-38 320.8 24.9 249 423-729 6-264 (279)
274 cd07854 STKc_MAPK4_6 Catalytic 100.0 9.9E-34 2.1E-38 331.7 24.9 272 423-735 4-306 (342)
275 cd06917 STKc_NAK1_like Catalyt 100.0 8.7E-34 1.9E-38 321.1 23.4 253 425-736 2-262 (277)
276 cd05084 PTKc_Fes Catalytic dom 100.0 1.7E-33 3.6E-38 314.2 25.0 242 430-728 1-248 (252)
277 cd05049 PTKc_Trk Catalytic dom 100.0 8.4E-34 1.8E-38 321.5 22.8 250 423-729 4-277 (280)
278 cd05061 PTKc_InsR Catalytic do 100.0 2.1E-33 4.5E-38 320.5 26.1 256 423-735 5-286 (288)
279 cd05052 PTKc_Abl Catalytic dom 100.0 1.8E-33 3.8E-38 316.4 25.1 246 424-729 6-258 (263)
280 cd06659 STKc_PAK6 Catalytic do 100.0 6.8E-34 1.5E-38 326.4 22.1 252 425-735 22-277 (297)
281 cd08229 STKc_Nek7 Catalytic do 100.0 9.1E-34 2E-38 318.9 22.7 248 424-728 2-260 (267)
282 cd06640 STKc_MST4 Catalytic do 100.0 1.1E-33 2.3E-38 320.9 23.4 253 424-736 4-260 (277)
283 cd05035 PTKc_Axl_like Catalyti 100.0 1.8E-33 3.9E-38 317.1 25.1 254 426-729 1-268 (273)
284 PF07714 Pkinase_Tyr: Protein 100.0 4.1E-34 9E-39 321.5 19.8 245 427-728 2-257 (259)
285 cd05606 STKc_beta_ARK Catalyti 100.0 1.6E-33 3.5E-38 319.9 24.8 249 431-739 1-265 (278)
286 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3E-33 6.5E-38 319.0 27.1 257 424-737 1-274 (287)
287 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.7E-33 5.8E-38 314.7 26.1 248 424-728 2-260 (267)
288 cd06606 STKc_MAPKKK Catalytic 100.0 3.5E-33 7.6E-38 310.7 26.7 256 425-732 1-260 (260)
289 cd05051 PTKc_DDR Catalytic dom 100.0 1.5E-33 3.3E-38 322.3 24.2 252 423-729 4-293 (296)
290 cd07838 STKc_CDK4_6_like Catal 100.0 1.8E-33 3.9E-38 319.6 24.5 255 426-732 1-287 (287)
291 cd05111 PTK_HER3 Pseudokinase 100.0 2E-33 4.4E-38 319.2 24.7 249 423-729 6-264 (279)
292 cd08226 PK_STRAD_beta Pseudoki 100.0 8.8E-34 1.9E-38 330.1 22.1 261 430-738 4-317 (328)
293 cd05032 PTKc_InsR_like Catalyt 100.0 2.7E-33 5.9E-38 316.8 25.4 250 423-729 5-274 (277)
294 cd05033 PTKc_EphR Catalytic do 100.0 3.2E-33 7E-38 314.7 25.8 249 424-729 4-261 (266)
295 KOG1095 Protein tyrosine kinas 100.0 7E-34 1.5E-38 353.9 21.9 248 424-728 692-956 (1025)
296 cd06648 STKc_PAK_II Catalytic 100.0 3.1E-33 6.7E-38 318.8 25.6 253 425-736 20-276 (285)
297 cd05091 PTKc_Ror2 Catalytic do 100.0 1.1E-33 2.3E-38 321.6 21.6 250 423-729 4-279 (283)
298 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-33 2.7E-38 331.0 22.7 251 424-729 7-335 (343)
299 cd08215 STKc_Nek Catalytic dom 100.0 4.2E-33 9.2E-38 310.3 25.9 250 425-732 1-258 (258)
300 cd05088 PTKc_Tie2 Catalytic do 100.0 1.9E-33 4.1E-38 323.6 23.7 247 423-729 6-276 (303)
301 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.8E-33 6.1E-38 313.8 24.5 245 424-729 4-254 (256)
302 PHA03390 pk1 serine/threonine- 100.0 1.6E-33 3.5E-38 318.1 22.7 246 422-734 12-267 (267)
303 cd05611 STKc_Rim15_like Cataly 100.0 1.8E-33 3.9E-38 315.4 22.9 248 430-737 2-259 (260)
304 PRK14799 thrS threonyl-tRNA sy 100.0 2.2E-33 4.8E-38 339.3 25.1 358 782-1231 155-534 (545)
305 cd06635 STKc_TAO1 Catalytic do 100.0 4.2E-33 9.1E-38 322.8 26.5 252 424-735 25-283 (317)
306 cd05581 STKc_PDK1 Catalytic do 100.0 2.8E-33 6E-38 316.6 24.4 265 424-732 1-280 (280)
307 cd06627 STKc_Cdc7_like Catalyt 100.0 5.4E-33 1.2E-37 309.2 26.3 250 425-732 1-254 (254)
308 cd05053 PTKc_FGFR Catalytic do 100.0 2.4E-33 5.2E-38 320.4 24.0 250 423-729 11-287 (293)
309 cd06618 PKc_MKK7 Catalytic dom 100.0 4.5E-33 9.8E-38 319.0 26.2 258 423-737 14-281 (296)
310 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.5E-33 7.6E-38 317.5 25.0 252 424-728 3-276 (283)
311 cd06647 STKc_PAK_I Catalytic d 100.0 1.9E-33 4.1E-38 322.0 22.8 255 423-736 18-276 (293)
312 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.3E-33 7.1E-38 316.9 24.6 249 424-729 6-274 (277)
313 cd05093 PTKc_TrkB Catalytic do 100.0 3.5E-33 7.5E-38 318.7 24.8 247 424-728 5-274 (288)
314 KOG1187 Serine/threonine prote 100.0 1E-33 2.3E-38 330.5 20.9 247 424-729 75-348 (361)
315 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.7E-34 1.9E-38 321.5 19.7 252 424-735 4-259 (277)
316 cd05072 PTKc_Lyn Catalytic dom 100.0 4.1E-33 8.8E-38 312.8 24.9 245 423-728 5-256 (261)
317 cd05577 STKc_GRK Catalytic dom 100.0 2.9E-33 6.3E-38 317.3 23.9 248 432-738 1-263 (277)
318 cd05097 PTKc_DDR_like Catalyti 100.0 2.5E-33 5.5E-38 320.9 23.6 250 424-728 5-291 (295)
319 cd06641 STKc_MST3 Catalytic do 100.0 4.1E-33 8.8E-38 316.1 24.9 252 425-736 5-260 (277)
320 cd05059 PTKc_Tec_like Catalyti 100.0 3.8E-33 8.2E-38 312.5 24.2 245 424-729 4-254 (256)
321 cd05115 PTKc_Zap-70 Catalytic 100.0 4.9E-33 1.1E-37 312.2 25.1 242 431-729 2-251 (257)
322 cd08530 STKc_CNK2-like Catalyt 100.0 5.4E-33 1.2E-37 309.9 25.1 247 425-731 1-255 (256)
323 cd05060 PTKc_Syk_like Catalyti 100.0 5.2E-33 1.1E-37 311.4 25.0 243 430-729 1-251 (257)
324 cd05089 PTKc_Tie1 Catalytic do 100.0 4.3E-33 9.4E-38 319.4 24.7 246 424-729 2-271 (297)
325 cd05610 STKc_MASTL Catalytic d 100.0 5.1E-33 1.1E-37 351.7 27.8 149 423-611 3-153 (669)
326 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.6E-33 7.8E-38 317.8 23.6 252 425-729 5-279 (284)
327 cd06614 STKc_PAK Catalytic dom 100.0 4.8E-33 1E-37 316.9 24.6 255 423-736 18-277 (286)
328 cd00192 PTKc Catalytic domain 100.0 5.3E-33 1.2E-37 310.2 24.5 243 430-729 1-260 (262)
329 cd05122 PKc_STE Catalytic doma 100.0 9.7E-33 2.1E-37 305.8 26.3 248 425-731 1-253 (253)
330 cd05579 STKc_MAST_like Catalyt 100.0 3.3E-33 7.2E-38 312.7 22.6 256 432-736 1-264 (265)
331 cd07829 STKc_CDK_like Catalyti 100.0 3.6E-33 7.7E-38 316.3 22.8 252 426-732 1-282 (282)
332 cd05118 STKc_CMGC Catalytic do 100.0 3.8E-33 8.1E-38 316.2 23.0 252 426-732 1-283 (283)
333 cd06633 STKc_TAO3 Catalytic do 100.0 1.1E-32 2.4E-37 318.7 27.2 251 425-736 22-280 (313)
334 cd06634 STKc_TAO2 Catalytic do 100.0 6.3E-33 1.4E-37 320.0 24.4 251 424-735 15-273 (308)
335 cd05050 PTKc_Musk Catalytic do 100.0 6.8E-33 1.5E-37 316.0 24.0 249 423-728 4-284 (288)
336 cd05055 PTKc_PDGFR Catalytic d 100.0 7.2E-33 1.6E-37 318.7 24.3 251 423-729 34-297 (302)
337 cd07830 STKc_MAK_like Catalyti 100.0 8E-33 1.7E-37 314.0 24.3 250 426-732 1-283 (283)
338 cd05068 PTKc_Frk_like Catalyti 100.0 1.2E-32 2.6E-37 309.1 25.3 244 424-728 6-256 (261)
339 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.1E-33 1.1E-37 331.6 23.5 250 424-729 37-395 (401)
340 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.1E-32 2.3E-37 313.5 25.1 252 424-729 4-279 (284)
341 cd05066 PTKc_EphR_A Catalytic 100.0 9.8E-33 2.1E-37 311.1 24.3 249 424-728 4-261 (267)
342 cd05082 PTKc_Csk Catalytic dom 100.0 1.1E-32 2.3E-37 308.6 24.3 241 423-729 5-252 (256)
343 cd05065 PTKc_EphR_B Catalytic 100.0 1.2E-32 2.5E-37 310.7 24.7 253 423-729 3-264 (269)
344 cd05098 PTKc_FGFR1 Catalytic d 100.0 1E-32 2.2E-37 317.9 24.6 249 424-729 18-295 (307)
345 KOG0199 ACK and related non-re 100.0 6.8E-34 1.5E-38 329.5 14.4 251 422-729 108-368 (1039)
346 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-32 2.4E-37 315.0 24.4 248 424-729 5-278 (291)
347 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.4E-33 9.4E-38 312.3 20.6 246 423-729 5-257 (261)
348 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.8E-32 4E-37 308.7 25.7 250 424-729 5-263 (268)
349 cd05101 PTKc_FGFR2 Catalytic d 100.0 1E-32 2.2E-37 317.4 23.8 250 423-729 14-292 (304)
350 KOG4257 Focal adhesion tyrosin 100.0 2.3E-33 4.9E-38 321.4 17.9 244 426-728 391-644 (974)
351 cd05071 PTKc_Src Catalytic dom 100.0 1.6E-32 3.5E-37 308.7 24.8 243 424-728 6-255 (262)
352 KOG2345 Serine/threonine prote 100.0 7.5E-34 1.6E-38 296.8 12.5 263 423-729 20-296 (302)
353 KOG0603 Ribosomal protein S6 k 100.0 3.3E-33 7.1E-38 326.9 19.4 244 419-732 317-566 (612)
354 cd05092 PTKc_TrkA Catalytic do 100.0 1.3E-32 2.8E-37 312.7 23.9 247 424-728 5-276 (280)
355 cd08216 PK_STRAD Pseudokinase 100.0 7.4E-33 1.6E-37 319.7 22.1 258 431-736 5-302 (314)
356 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-32 3.5E-37 307.9 24.2 244 423-728 5-255 (260)
357 cd05039 PTKc_Csk_like Catalyti 100.0 2.4E-32 5.2E-37 305.6 25.4 241 423-729 5-252 (256)
358 cd05095 PTKc_DDR2 Catalytic do 100.0 1.5E-32 3.1E-37 314.8 23.8 250 424-728 5-292 (296)
359 KOG0196 Tyrosine kinase, EPH ( 100.0 2.2E-33 4.8E-38 330.0 17.2 251 423-729 628-887 (996)
360 cd05040 PTKc_Ack_like Catalyti 100.0 1.9E-32 4.2E-37 306.3 24.1 244 430-729 1-254 (257)
361 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.4E-32 5.3E-37 306.5 24.9 244 423-728 5-255 (260)
362 cd05045 PTKc_RET Catalytic dom 100.0 2.1E-32 4.6E-37 312.4 24.8 248 425-729 1-282 (290)
363 cd06657 STKc_PAK4 Catalytic do 100.0 1.1E-32 2.4E-37 315.7 22.4 252 426-736 22-277 (292)
364 cd05043 PTK_Ryk Pseudokinase d 100.0 2.1E-32 4.6E-37 310.4 24.5 251 423-729 5-272 (280)
365 cd05046 PTK_CCK4 Pseudokinase 100.0 2.4E-32 5.3E-37 308.9 24.6 249 424-729 5-272 (275)
366 cd05058 PTKc_Met_Ron Catalytic 100.0 2.3E-32 4.9E-37 306.7 24.1 246 430-729 1-255 (262)
367 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.8E-32 6.2E-37 315.3 25.5 249 424-729 12-289 (314)
368 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.4E-33 9.4E-38 312.5 18.1 235 430-729 1-256 (258)
369 PHA02882 putative serine/threo 100.0 2.8E-32 6E-37 312.6 24.8 257 424-728 12-291 (294)
370 cd05613 STKc_MSK1_N N-terminal 100.0 2.8E-32 6.1E-37 311.2 24.8 260 425-740 1-279 (290)
371 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.2E-32 2.6E-37 310.0 21.2 235 430-729 1-260 (262)
372 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.4E-32 7.3E-37 307.1 24.9 244 430-728 1-265 (269)
373 cd05056 PTKc_FAK Catalytic dom 100.0 3.8E-32 8.1E-37 306.7 24.7 247 424-729 6-261 (270)
374 cd05042 PTKc_Aatyk Catalytic d 100.0 2.9E-32 6.3E-37 307.4 23.8 243 431-728 2-265 (269)
375 cd05069 PTKc_Yes Catalytic dom 100.0 4.5E-32 9.8E-37 304.5 25.1 243 424-728 6-255 (260)
376 cd05110 PTKc_HER4 Catalytic do 100.0 2.7E-32 5.8E-37 313.9 23.8 249 423-729 6-264 (303)
377 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.1E-32 4.5E-37 310.3 22.3 234 431-729 2-272 (274)
378 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.8E-32 8.2E-37 317.2 24.8 249 424-729 12-289 (334)
379 cd05112 PTKc_Itk Catalytic dom 100.0 7E-32 1.5E-36 301.7 25.7 245 424-729 4-254 (256)
380 cd05085 PTKc_Fer Catalytic dom 100.0 6.1E-32 1.3E-36 301.0 25.1 241 430-729 1-247 (250)
381 cd05034 PTKc_Src_like Catalyti 100.0 7.4E-32 1.6E-36 302.4 25.6 245 423-728 5-256 (261)
382 cd05047 PTKc_Tie Catalytic dom 100.0 4.8E-32 1E-36 306.2 24.0 239 431-729 2-264 (270)
383 KOG1006 Mitogen-activated prot 100.0 7.5E-34 1.6E-38 298.5 8.1 254 424-735 64-333 (361)
384 KOG4278 Protein tyrosine kinas 100.0 8.7E-33 1.9E-37 315.2 17.3 244 425-728 268-518 (1157)
385 cd05057 PTKc_EGFR_like Catalyt 100.0 8.4E-32 1.8E-36 305.5 25.5 247 424-728 7-263 (279)
386 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.3E-32 7.1E-37 304.4 21.7 233 430-729 1-257 (259)
387 smart00219 TyrKc Tyrosine kina 100.0 8.2E-32 1.8E-36 300.5 24.5 245 426-728 1-256 (258)
388 cd05041 PTKc_Fes_like Catalyti 100.0 9.8E-32 2.1E-36 299.5 24.5 242 430-729 1-248 (251)
389 cd08222 STKc_Nek11 Catalytic d 100.0 5.3E-32 1.1E-36 303.5 22.4 249 425-732 1-260 (260)
390 cd05583 STKc_MSK_N N-terminal 100.0 9.1E-32 2E-36 306.7 24.5 259 425-740 1-277 (288)
391 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-31 2.3E-36 303.1 24.7 244 431-729 2-265 (268)
392 cd05074 PTKc_Tyro3 Catalytic d 100.0 9.3E-32 2E-36 303.6 24.2 254 426-729 1-268 (273)
393 cd05123 STKc_AGC Catalytic dom 100.0 6.7E-32 1.5E-36 300.2 22.5 242 432-732 1-250 (250)
394 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 6.8E-32 1.5E-36 306.1 22.9 253 424-729 4-279 (284)
395 cd05083 PTKc_Chk Catalytic dom 100.0 9.9E-32 2.1E-36 300.5 22.8 239 423-729 5-250 (254)
396 KOG0587 Traf2- and Nck-interac 100.0 4E-32 8.7E-37 324.5 20.0 259 424-735 19-288 (953)
397 KOG1094 Discoidin domain recep 100.0 1.9E-32 4E-37 313.0 16.3 249 425-729 539-800 (807)
398 cd05073 PTKc_Hck Catalytic dom 100.0 3.2E-31 6.8E-36 297.6 25.7 244 423-728 5-255 (260)
399 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-31 2.7E-36 301.9 22.2 242 431-729 2-266 (269)
400 cd08528 STKc_Nek10 Catalytic d 100.0 3.4E-31 7.3E-36 298.6 24.9 247 425-729 1-266 (269)
401 KOG2052 Activin A type IB rece 100.0 5.7E-32 1.2E-36 302.6 17.9 263 411-728 198-498 (513)
402 cd05576 STKc_RPK118_like Catal 100.0 1.8E-31 3.9E-36 295.9 20.1 228 435-732 4-237 (237)
403 PLN03225 Serine/threonine-prot 100.0 1.9E-31 4E-36 329.8 20.1 261 422-736 130-457 (566)
404 KOG0671 LAMMER dual specificit 100.0 7.4E-32 1.6E-36 297.6 10.5 250 422-735 87-412 (415)
405 KOG4250 TANK binding protein k 100.0 1.4E-31 3.1E-36 314.9 12.0 246 425-722 14-297 (732)
406 KOG3653 Transforming growth fa 100.0 9.3E-31 2E-35 295.0 17.4 249 423-728 209-498 (534)
407 KOG1151 Tousled-like protein k 100.0 1.2E-31 2.7E-36 296.5 9.9 263 424-734 463-746 (775)
408 PRK09194 prolyl-tRNA synthetas 100.0 2.3E-29 5.1E-34 310.7 30.9 433 782-1225 34-561 (565)
409 KOG1027 Serine/threonine prote 100.0 2.6E-31 5.5E-36 316.4 12.3 247 429-737 514-775 (903)
410 KOG0664 Nemo-like MAPK-related 100.0 4.2E-32 9E-37 285.0 3.1 258 429-735 58-349 (449)
411 KOG0576 Mitogen-activated prot 100.0 1E-31 2.2E-36 311.8 6.4 271 423-751 14-294 (829)
412 KOG0668 Casein kinase II, alph 100.0 6.8E-31 1.5E-35 270.5 11.3 253 422-736 36-329 (338)
413 KOG0665 Jun-N-terminal kinase 100.0 6.1E-31 1.3E-35 284.2 11.2 256 424-733 17-314 (369)
414 PLN02908 threonyl-tRNA synthet 100.0 2.2E-29 4.8E-34 316.3 26.6 352 783-1230 309-684 (686)
415 smart00220 S_TKc Serine/Threon 100.0 3.4E-29 7.4E-34 275.2 22.8 239 436-732 1-244 (244)
416 PLN03224 probable serine/threo 100.0 5.1E-29 1.1E-33 300.9 24.3 268 421-734 142-505 (507)
417 KOG0200 Fibroblast/platelet-de 100.0 6.4E-29 1.4E-33 310.1 21.7 248 425-729 297-575 (609)
418 KOG1025 Epidermal growth facto 100.0 2.6E-29 5.5E-34 296.2 14.3 246 426-729 698-953 (1177)
419 KOG1290 Serine/threonine prote 100.0 4.4E-28 9.6E-33 273.6 22.3 135 424-597 78-223 (590)
420 KOG0670 U4/U6-associated splic 100.0 2.7E-29 5.9E-34 283.6 10.8 251 423-734 431-751 (752)
421 KOG0984 Mitogen-activated prot 100.0 9.6E-29 2.1E-33 251.8 12.6 200 424-680 46-257 (282)
422 PLN00113 leucine-rich repeat r 100.0 2.1E-28 4.5E-33 324.9 19.2 236 424-729 690-947 (968)
423 KOG1152 Signal transduction se 100.0 4.6E-29 1E-33 285.3 10.5 197 423-676 560-770 (772)
424 PRK12325 prolyl-tRNA synthetas 99.9 1.8E-26 4E-31 276.4 27.2 371 782-1225 34-438 (439)
425 TIGR00409 proS_fam_II prolyl-t 99.9 9.2E-27 2E-31 285.0 24.3 430 774-1226 28-567 (568)
426 cd00180 PKc Catalytic domain o 99.9 1.7E-25 3.6E-30 239.2 22.9 212 432-730 1-215 (215)
427 KOG1167 Serine/threonine prote 99.9 8.2E-27 1.8E-31 261.4 12.2 267 423-736 35-388 (418)
428 PLN00181 protein SPA1-RELATED; 99.9 9.8E-27 2.1E-31 301.4 12.2 198 536-735 53-271 (793)
429 KOG1024 Receptor-like protein 99.9 4.5E-26 9.8E-31 250.5 13.7 249 424-728 284-550 (563)
430 PRK04173 glycyl-tRNA synthetas 99.9 1.7E-25 3.6E-30 267.9 19.5 322 784-1227 27-455 (456)
431 KOG1345 Serine/threonine kinas 99.9 4.6E-26 1E-30 240.4 9.1 253 415-728 15-286 (378)
432 TIGR00408 proS_fam_I prolyl-tR 99.9 2.7E-24 6E-29 259.1 21.9 325 782-1232 25-385 (472)
433 smart00221 STYKc Protein kinas 99.9 8E-24 1.7E-28 230.6 21.9 209 426-689 1-215 (225)
434 PRK08661 prolyl-tRNA synthetas 99.9 3.4E-23 7.3E-28 250.3 26.3 325 784-1232 33-391 (477)
435 KOG1033 eIF-2alpha kinase PEK/ 99.9 2.2E-25 4.7E-30 257.1 5.8 298 419-731 44-514 (516)
436 PLN02837 threonine-tRNA ligase 99.9 4.8E-23 1E-27 255.9 27.0 353 783-1231 235-611 (614)
437 PRK03991 threonyl-tRNA synthet 99.9 1.3E-21 2.8E-26 240.7 30.0 347 784-1231 216-595 (613)
438 smart00750 KIND kinase non-cat 99.9 3.5E-23 7.7E-28 218.3 12.4 157 547-732 1-168 (176)
439 PRK09188 serine/threonine prot 99.9 2.2E-22 4.7E-27 234.0 15.7 174 421-651 15-194 (365)
440 KOG1165 Casein kinase (serine/ 99.9 7.2E-22 1.6E-26 214.3 14.7 202 424-678 28-239 (449)
441 COG0515 SPS1 Serine/threonine 99.9 4.3E-20 9.3E-25 209.8 24.8 253 426-730 2-276 (384)
442 KOG1163 Casein kinase (serine/ 99.9 1.2E-20 2.6E-25 196.8 17.8 256 418-726 9-277 (341)
443 COG0441 ThrS Threonyl-tRNA syn 99.9 1.5E-20 3.3E-25 226.3 21.5 354 782-1231 207-583 (589)
444 KOG0590 Checkpoint kinase and 99.9 2.9E-22 6.2E-27 247.4 6.7 260 428-738 322-594 (601)
445 KOG1164 Casein kinase (serine/ 99.9 3.7E-20 8E-25 215.1 23.0 256 425-729 19-293 (322)
446 KOG0603 Ribosomal protein S6 k 99.8 2.1E-22 4.6E-27 236.6 3.9 241 431-740 1-254 (612)
447 KOG4018 Uncharacterized conser 99.8 1.3E-21 2.9E-26 200.8 6.6 119 27-151 1-121 (215)
448 KOG0606 Microtubule-associated 99.8 6.3E-21 1.4E-25 233.1 9.5 237 423-738 82-324 (1205)
449 KOG1240 Protein kinase contain 99.8 4.6E-21 1E-25 233.8 7.9 272 425-751 24-316 (1431)
450 cd00670 Gly_His_Pro_Ser_Thr_tR 99.8 1.6E-19 3.4E-24 200.4 14.1 137 795-933 2-158 (235)
451 KOG4158 BRPK/PTEN-induced prot 99.8 1.4E-19 2.9E-24 200.2 12.7 282 419-724 152-505 (598)
452 cd05147 RIO1_euk RIO kinase fa 99.8 1E-19 2.2E-24 194.8 11.1 139 430-612 3-167 (190)
453 cd05145 RIO1_like RIO kinase f 99.8 8.1E-19 1.8E-23 188.2 13.6 141 429-613 2-168 (190)
454 PRK10359 lipopolysaccharide co 99.8 7.3E-19 1.6E-23 190.9 11.7 179 423-672 30-216 (232)
455 cd00771 ThrRS_core Threonyl-tR 99.8 3.3E-18 7.1E-23 195.7 14.5 149 783-933 18-183 (298)
456 cd00779 ProRS_core_prok Prolyl 99.8 7E-19 1.5E-23 196.7 7.4 152 782-935 18-186 (255)
457 PF14531 Kinase-like: Kinase-l 99.7 3.8E-18 8.3E-23 190.6 11.3 248 425-720 13-288 (288)
458 PRK10345 hypothetical protein; 99.7 3.4E-17 7.4E-22 177.3 15.4 137 429-610 7-157 (210)
459 PRK12274 serine/threonine prot 99.7 8.2E-17 1.8E-21 171.4 14.5 191 428-673 6-202 (218)
460 smart00591 RWD domain in RING 99.7 1.1E-16 2.4E-21 155.0 12.3 104 37-144 1-106 (107)
461 smart00090 RIO RIO-like kinase 99.7 9.1E-17 2E-21 178.0 11.3 143 425-612 29-198 (237)
462 KOG1637 Threonyl-tRNA syntheta 99.7 1.1E-15 2.4E-20 172.0 19.5 351 782-1228 179-555 (560)
463 TIGR00389 glyS_dimeric glycyl- 99.7 5.5E-15 1.2E-19 177.7 25.7 121 1105-1227 414-550 (551)
464 KOG1023 Natriuretic peptide re 99.6 3.4E-16 7.3E-21 185.3 11.0 234 477-769 1-258 (484)
465 cd00772 ProRS_core Prolyl-tRNA 99.6 1.9E-15 4.1E-20 169.6 13.6 148 783-932 20-190 (264)
466 PRK14879 serine/threonine prot 99.6 3.2E-15 7E-20 162.7 13.8 135 430-611 2-143 (211)
467 cd05144 RIO2_C RIO kinase fami 99.6 2.1E-15 4.5E-20 162.8 11.6 136 426-612 17-175 (198)
468 PF05773 RWD: RWD domain; Int 99.6 1.6E-15 3.4E-20 148.3 8.8 112 29-142 1-113 (113)
469 cd00774 GlyRS-like_core Glycyl 99.6 2.6E-15 5.7E-20 167.9 10.7 133 783-923 20-169 (254)
470 KOG1166 Mitotic checkpoint ser 99.6 5.3E-15 1.2E-19 186.1 13.1 237 423-727 697-947 (974)
471 COG0423 GRS1 Glycyl-tRNA synth 99.6 2.5E-14 5.3E-19 165.5 17.2 125 1105-1231 415-554 (558)
472 PRK14894 glycyl-tRNA synthetas 99.6 1.1E-13 2.4E-18 161.2 21.7 97 1131-1229 432-538 (539)
473 TIGR03724 arch_bud32 Kae1-asso 99.6 1.1E-14 2.3E-19 157.1 12.2 131 431-611 1-138 (199)
474 PLN02734 glycyl-tRNA synthetas 99.6 2.2E-14 4.8E-19 174.6 15.7 122 1105-1231 528-664 (684)
475 KOG0590 Checkpoint kinase and 99.6 2.7E-16 5.9E-21 194.6 -0.9 260 423-734 19-291 (601)
476 PRK09605 bifunctional UGMP fam 99.5 2.2E-14 4.8E-19 178.0 14.2 136 425-611 334-476 (535)
477 cd05119 RIO RIO kinase family, 99.5 1.8E-14 4E-19 153.7 11.5 160 429-612 2-164 (187)
478 KOG0601 Cyclin-dependent kinas 99.5 1.1E-14 2.4E-19 172.4 5.6 260 424-736 114-386 (524)
479 PRK01723 3-deoxy-D-manno-octul 99.5 4.7E-13 1E-17 148.6 15.3 139 430-611 37-191 (239)
480 TIGR02367 PylS pyrrolysyl-tRNA 99.5 3.2E-13 7E-18 155.9 13.7 123 797-927 241-375 (453)
481 PF00587 tRNA-synt_2b: tRNA sy 99.4 2.7E-13 5.8E-18 143.3 9.8 136 797-933 1-154 (173)
482 KOG2324 Prolyl-tRNA synthetase 99.4 8.3E-13 1.8E-17 144.7 13.6 356 775-1224 34-426 (457)
483 KOG0606 Microtubule-associated 99.4 1.7E-13 3.6E-18 168.9 7.4 281 422-743 802-1106(1205)
484 cd05120 APH_ChoK_like Aminogly 99.4 1.5E-12 3.2E-17 132.2 11.6 131 428-611 2-138 (155)
485 PRK04172 pheS phenylalanyl-tRN 99.4 2.3E-12 4.9E-17 157.1 12.3 140 780-922 218-404 (489)
486 COG0442 ProS Prolyl-tRNA synth 99.4 7.2E-12 1.6E-16 149.1 15.8 407 774-1224 28-498 (500)
487 cd00778 ProRS_core_arch_euk Pr 99.3 1.6E-12 3.5E-17 146.1 7.9 139 783-922 20-182 (261)
488 PF03129 HGTP_anticodon: Antic 99.3 6.8E-12 1.5E-16 118.6 9.5 90 1135-1226 1-93 (94)
489 KOG0601 Cyclin-dependent kinas 99.3 1.4E-12 3.1E-17 154.6 5.7 250 419-731 260-516 (524)
490 KOG4445 Uncharacterized conser 99.3 3.6E-12 7.9E-17 136.0 6.6 106 37-145 2-111 (368)
491 cd00861 ProRS_anticodon_short 99.2 3.4E-11 7.4E-16 113.7 10.4 91 1133-1224 1-93 (94)
492 cd00860 ThrRS_anticodon ThrRS 99.2 5.1E-11 1.1E-15 111.6 11.3 90 1133-1224 1-90 (91)
493 cd00858 GlyRS_anticodon GlyRS 99.2 6.9E-11 1.5E-15 117.2 12.2 96 1131-1228 24-120 (121)
494 PRK09537 pylS pyrolysyl-tRNA s 99.2 5.3E-11 1.1E-15 138.6 12.0 123 798-928 206-340 (417)
495 PTZ00326 phenylalanyl-tRNA syn 99.2 1E-10 2.2E-15 138.7 14.3 147 798-946 231-460 (494)
496 TIGR01982 UbiB 2-polyprenylphe 99.2 1.2E-10 2.6E-15 140.4 12.0 72 538-612 233-307 (437)
497 cd00862 ProRS_anticodon_zinc P 99.1 3.7E-10 8E-15 121.9 12.7 103 1130-1233 7-115 (202)
498 PRK04750 ubiB putative ubiquin 99.1 4.8E-11 1E-15 145.4 6.4 154 423-613 119-315 (537)
499 cd00768 class_II_aaRS-like_cor 99.1 4.4E-10 9.4E-15 122.2 12.9 130 798-928 2-141 (211)
500 cd00738 HGTP_anticodon HGTP an 99.1 4.1E-10 9E-15 106.1 11.1 90 1133-1224 1-93 (94)
No 1
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.8e-93 Score=866.26 Aligned_cols=1117 Identities=39% Similarity=0.566 Sum_probs=728.6
Q ss_pred CCHHHHHHHHHHHhhhcCCceeeecCC----CCeEEEEEcCCCCCCCCCCCcEEEEEEEEcCCCCCCCCCccccccCCCC
Q 000880 29 DDNELLSEEITALCAIFQEDCKVVSGS----PPQILVKLRPYSKDMGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGL 104 (1239)
Q Consensus 29 ~~~eeq~~ElEaL~sIy~d~~~~~~~~----~~~~~i~i~~~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~~~~~~~~~l 104 (1239)
.+.|-|++|+|||.|||+++++-+... ...+.+.+.... . ..+..|++++++.||..+|.+.+.+..++
T Consensus 5 ~~~eiQ~~e~ea~k~i~~~d~e~l~~r~~w~~~i~l~~l~s~~-----~--~~~~~lh~~~~~~yp~~kp~i~lk~~~~~ 77 (1351)
T KOG1035|consen 5 LNYEIQENELEALKAIYMDDFEELKARWAWVCHILLIALRSCS-----L--KLSGRLHVKCKRKYPYSKPEIKLKDHQGV 77 (1351)
T ss_pred HHHHHHHHHHHhhcccccchHHHHHHHHhhhhhhhhhhhhhhh-----H--HHhhHhhhhhccccCCCCccccccccccc
Confidence 357899999999999999997654432 124444444332 1 36788999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCceeeehHHHHHHHHHHhhccCCCC--------Cc---------C-------------
Q 000880 105 TKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLGQS--------NE---------S------------- 154 (1239)
Q Consensus 105 ~~~~~~~l~~~L~e~~~e~~~~G~~mif~lv~~lke~L~~~~~~~~~--------~~---------~------------- 154 (1239)
++++++.|.+.|+..+.... |++|||.|....||||.+.-..... .. +
T Consensus 78 ~d~~i~~L~~~l~~~~~~~~--G~~~i~eLa~~vqefl~~~~~~~~~~~dr~~~~~rr~~~~~~~~~q~ele~~~~e~~~ 155 (1351)
T KOG1035|consen 78 SDEDIELLSNELTALAKTLR--GEVMIAELASIVQEFLKDHQDRPSGFHDRMLQDIRRQYSKLMDYEQDELEAREIERCQ 155 (1351)
T ss_pred hHHHHHHHHHHHHHhhcccc--ccEEeeeHhhhhHHHHhccCCCCCcchHHHHHHHHHHHHhhhhhhhccHHHhhhHhhc
Confidence 99999999999999999999 9999999999999999986543331 00 0
Q ss_pred --CCCcc-------ccccc---------------------------------ccccC--c--------------------
Q 000880 155 --VPGLV-------TESSS---------------------------------QSFEG--S-------------------- 170 (1239)
Q Consensus 155 --~~~~~-------~~~~~---------------------------------~~~~~--~-------------------- 170 (1239)
.|... .++.. ++++. .
T Consensus 156 ~g~p~~~~~~~~t~~e~~~~~~~~~~vy~~ls~~~~~~l~l~k~~~~~qs~~~~~~~s~~~~~~~~~k~~i~~~E~e~~~ 235 (1351)
T KOG1035|consen 156 RGSPRKTMSLQGTREESHGNIFYGKRVYPILSHLTQGTLLLVKWVEQAQSLSEPIEISHDYESTPCGKKEIQTTEIELES 235 (1351)
T ss_pred cCCcchhhhhcCCCCCCcccceecceeeeeeccccCceEEEEehhhhHHhhcCcccccCcccCccchHHHHHHHHHHHHH
Confidence 00000 00000 00000 0
Q ss_pred cccccccCCCCcceeeeeeeeccC---CCCccccccccccCCCcccCCCCCCCCCCcchhh--hhhhccCCCcccccCCC
Q 000880 171 AVSASKSCSSKVPFVYGFIDLFSG---CGESWHWGLGIDENRGVVPSVPSHASDGSNYEVM--WRKIDKNVKPLMIPDAN 245 (1239)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 245 (1239)
.+|+ .-|--|.+|+|++.+++.+ .+.+|. ..-.++++.+-+|-++ .+|.. |++ -+.
T Consensus 236 l~k~-~~~n~~~~~~~~le~~~~g~~~~v~~~~--~s~~~~~~~~q~v~~i-----~~~~~r~~~~-----------~~~ 296 (1351)
T KOG1035|consen 236 LSKI-AHDNLGGYFVYGLERLFRGIVLDVLQEI--CSKVELRSLLQSVGSI-----PLETLRILHQ-----------KLL 296 (1351)
T ss_pred HHhh-ccccccceeEEeehhhcchHHHHHHHhh--cCccchHHHHhhcccc-----CHHHHHHHHH-----------HHh
Confidence 0111 2245678888999888887 122222 2334455544444332 23332 111 111
Q ss_pred CccccccCCccccccc-------c--ccCCCCceeccCC-CCCCCccccccccccccccchhhccCCCCCCCCCcccccc
Q 000880 246 QGTALIPSAKLDTVKE-------E--NEDDNRSISTTDS-STSPMEEWVENGIKGENRDSLLQDHGSNNDGGDTEIDRLE 315 (1239)
Q Consensus 246 ~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1239)
-|.+..-++.++++.= + +.++...+|-++- +..|.+ ++..+.+.+...-
T Consensus 297 ~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~---------------------d~~~~~~~~~~~~ 355 (1351)
T KOG1035|consen 297 EGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLP---------------------DNEKSFSDLLAEI 355 (1351)
T ss_pred hhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCC---------------------CcccchhhcCccc
Confidence 2233333334444331 1 1111111111010 011111 1111222222222
Q ss_pred cccccccCCCcCcccchhhHHHHHHHHHhcccCCCcCccHHHHHHHHhhc-----CCCCccccccCCCCcchhhhhhhHH
Q 000880 316 SFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNL-----GIFSERGRDLASKPSSQFNKTFNQV 390 (1239)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~lc~~~~~~~~~~~~~~~~l~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (1239)
.+.-+.+-+.-.+....++|+..+++.+.-..+...+.-......-+-.. ......-.+...+-+.....-+...
T Consensus 356 ~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 356 RNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred cccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccchhhhhccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 33333333444444455666666666665555544442211111111000 0000000000000000000000000
Q ss_pred Hhh---hhcc--------ccccCCcCCCCCCCCCCCCCCCCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEec
Q 000880 391 FHQ---KMVS--------SRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL 459 (1239)
Q Consensus 391 ~~~---~~~s--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~ 459 (1239)
+.. ...+ ....+.+.+.....++. ....+||++||++++.||+||||.||+|+++.+|+.||||+|+.
T Consensus 436 f~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~s~~-~r~~SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl 514 (1351)
T KOG1035|consen 436 FLRFPTDNESSEFAPNDETSVPQFRLRFSGAMSPL-QRQFSRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPL 514 (1351)
T ss_pred hcccccccccccccCccccccCccCCCCccccCcc-ccchhhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccC
Confidence 000 0000 00111111111111221 22337999999999999999999999999999999999999998
Q ss_pred CCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC------CcCCC-------------------------
Q 000880 460 KDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD------SMWGS------------------------- 508 (1239)
Q Consensus 460 ~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~------~~~~~------------------------- 508 (1239)
+. +.....++.+|+++|++|+|||||+||.+|++.....-..+ .-|.-
T Consensus 515 ~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~ 593 (1351)
T KOG1035|consen 515 KA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSEL 593 (1351)
T ss_pred ch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchh
Confidence 76 66778899999999999999999999999998653100000 00000
Q ss_pred -----Ccccccccc------------------cc------cc-----------c-cccccccccccc-------ccEEEE
Q 000880 509 -----GTLASSTFS------------------NR------AA-----------S-SADVTGQENKLE-------STYLYI 540 (1239)
Q Consensus 509 -----g~~~s~~~~------------------~~------~~-----------~-~~~v~~~~~~~~-------~~~l~i 540 (1239)
+...++.+. +. +. . +..+...++..+ ..++||
T Consensus 594 ~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYI 673 (1351)
T KOG1035|consen 594 DSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYI 673 (1351)
T ss_pred hccccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEE
Confidence 000000000 00 00 0 000111122222 278999
Q ss_pred EeeccCCCHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhcccc--c
Q 000880 541 QMEYCPRTLRQVFESYDHF--DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE--Q 616 (1239)
Q Consensus 541 VmEy~~gsL~~~l~~~~~l--~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~--~ 616 (1239)
+||||+.++.+.+..++.+ ....+|++++||++||+|+|++|||||||||.||+++++++|||+|||+|+..... .
T Consensus 674 QMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~ 753 (1351)
T KOG1035|consen 674 QMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLES 753 (1351)
T ss_pred EHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhh
Confidence 9999998766666655555 48899999999999999999999999999999999999999999999999974311 1
Q ss_pred cccCCC-CCCCCCCccccCcccccCccCCCcccccCCC--CCCcchhhHHHHHHHHHhhcCCchhHHHHHHHHhhhhcCC
Q 000880 617 LDQDAA-FPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGE 693 (1239)
Q Consensus 617 ~~~~~~-~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~~~~~~~ 693 (1239)
...... .....+....+.|+.+||..|+|||++.+.. .|+.|+|||||||||+||++||.+.|++...+..++ .+.
T Consensus 754 ~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR-~g~ 832 (1351)
T KOG1035|consen 754 IDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLR-KGS 832 (1351)
T ss_pred HhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcc-cCC
Confidence 111111 2223344455788999999999999998866 699999999999999999999999999999999998 888
Q ss_pred CCCc---cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHHHHHHHHhcCCCCCCcchhhhccccccchhhh
Q 000880 694 LPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLD 770 (1239)
Q Consensus 694 ~p~~---~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~~ 770 (1239)
+|.. +.+..+....+|++||+.||++||||.++|++.|++....++. ..........+...+.......++++...
T Consensus 833 iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llppe~~el~-~~~~h~~~~~~~k~~~~~~~~~~~q~~~~ 911 (1351)
T KOG1035|consen 833 IPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPPEESELL-VFLQHLYIEQLGKAYKNLLQLIFEQEVLE 911 (1351)
T ss_pred CCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCccchHHH-HHHHHHHHHHHHHHHhchhhHHHHHhhhh
Confidence 8877 7777788999999999999999999999999999995333322 22222222223344444444455554444
Q ss_pred hhhccccccccCCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccceeccCCCccccccEEEEeccCCCeeeecC
Q 000880 771 MKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSH 850 (1239)
Q Consensus 771 ~~~~~~~~~ld~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~~~~~~D~~G~~l~LRP 850 (1239)
+..+ ++..+.. -.+++.+....+++++...+.++|++||+.+..||++.+.........+.+.+.|++|-.++|-.
T Consensus 912 ~~n~--~yd~~~~--~~~~~~~~~~~l~~~v~e~~~~ifr~Hga~~l~tpp~~~~~~~~~~~~~~v~~ld~sG~~v~Lp~ 987 (1351)
T KOG1035|consen 912 VLNH--QYDLDRL--SYIQYTEINNELREYVVEEVVKIFRKHGAIELETPPLSLRNACAYFSRKAVELLDHSGDVVELPY 987 (1351)
T ss_pred hhcc--ccccccc--cccccchhHHHHHHHHHHHHHHHHHHhcceeccCCccccccccchhccceeeeecCCCCEEEeec
Confidence 3332 2222222 34577788899999999999999999999999999985554455567889999999999999999
Q ss_pred CCcHHHHHHHHhCCCCceeEEeecCeEEcCCCCCCCCceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEEC
Q 000880 851 ELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN 930 (1239)
Q Consensus 851 D~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg 930 (1239)
|++.|+||+++.|...-+|+|.++.|||..... ..+++++|+++|||...-..|||+|.++.|++...--..++.|.||
T Consensus 988 DLr~pfar~vs~N~~~~~Kry~i~rVyr~~~~~-hP~~~~ec~fDii~~t~sl~~AE~L~vi~Ei~~~~l~~~n~~i~ln 1066 (1351)
T KOG1035|consen 988 DLRLPFARYVSRNSVLSFKRYCISRVYRPAIHN-HPKECLECDFDIIGPTTSLTEAELLKVIVEITTEILHEGNCDIHLN 1066 (1351)
T ss_pred cccchHHHHhhhchHHHHHHhhhheeecccccC-CCccccceeeeEecCCCCccHHHHHHHHHHHHHHHhccCceeEEeC
Confidence 999999999999888899999999999987755 8889999999999988779999999999999987422335999999
Q ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHH----HHhcCChh
Q 000880 931 HGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG----LRFCGAAD 1006 (1239)
Q Consensus 931 ~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~----~~~~g~~~ 1006 (1239)
|..++++++..+|++++++..+..++...-..+ ...++...-.. ...........+..++ ....|..
T Consensus 1067 H~~LL~Ai~~~~~i~~~~r~~v~~~l~~~~~~r-------~~~~~~~~~~~-~~~~~s~~~~~l~~~~~~~~~~~~~~~- 1137 (1351)
T KOG1035|consen 1067 HADLLEAILSHCGIPKDQRRKVAELLSDMGSSR-------PQRSEKELKWV-FIRRSSLQLAKLPEFVLNRLFLVAGRF- 1137 (1351)
T ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhcc-------ccHHHHHHHHh-hhhHHHHHhhhhHHHHHhhhhhhhcch-
Confidence 999999999999999999999988877644322 11111111000 0111111112222211 1112322
Q ss_pred hHHHHHhccCCCChhHHHHHHHH-----HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccc
Q 000880 1007 QALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1081 (1239)
Q Consensus 1007 ~~l~~l~~~~~~~~~~~~~l~~l-----~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GG 1081 (1239)
..+..++..+.....++ +|++| ++..+|+...+.|+.+..+....-.|++|.+.+..... +.+....++.||
T Consensus 1138 ~~l~~~~~~~~~~~~vr-~L~eLe~~~~~~~~~~i~~~~~i~~g~~~~~~~~~g~~~qi~a~~~~~--~~~~~~~la~Gg 1214 (1351)
T KOG1035|consen 1138 QALKLIRGKLRADSLVR-ALKELENVVGLLRSLGIEEHVHIYVGPTESRHRNGGIQFQITAEIKSN--TSGDPVLLAAGG 1214 (1351)
T ss_pred hhhHHHhhhhhhhHHHH-HHHHHHHHHHHHHHhccccceEEeeccceeEEcCCcEEEEEeecccCC--CcCCceeeeccc
Confidence 44555555444444444 88888 77888998888889887777777789999998875432 233445699999
Q ss_pred cccchhhhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHHcC
Q 000880 1082 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1161 (1239)
Q Consensus 1082 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G 1161 (1239)
|||.|+..|++.+ .++ -.+|+|...- ..+...+..+..+.+.+..+||+||..+ ...+..++.+++.||..|
T Consensus 1215 Ryd~~~~~~~~~~---~~~---~p~a~gv~~~-~~~~~~~~~~~~~~~~~~~cdvlics~g-~~l~t~~~~l~~~LWs~g 1286 (1351)
T KOG1035|consen 1215 RYDSLLQEVRDEQ---KMN---LPGAIGVSAL-STIRQHAPKDLEPIKTPSSCDVLICSRG-SGLLTQRMELVAKLWSKG 1286 (1351)
T ss_pred chHHHHHHhhhhh---hhc---Ccccceehhh-HHHHHhhhccccCCCCcccccEEEEecC-CchHHHHHHHHHHHHHcC
Confidence 9999999997743 222 1357776522 2222222223333445568899999997 778999999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEc--cCCcccccchHHHHHHHHHHH
Q 000880 1162 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHL--DVKKEKEVQRESLVRFLLDAI 1228 (1239)
Q Consensus 1162 ~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l--~~~~q~~v~~~el~~~i~~~l 1228 (1239)
|++++.+.+...+..+-.||+..-+.+++++- +++..||.. .......+-..+|++++.+.+
T Consensus 1287 I~a~i~~~~s~~~~e~~e~~~~~~i~~iliv~-----n~~~~vks~~~e~~se~~~~~~elv~f~~~~~ 1350 (1351)
T KOG1035|consen 1287 IKAEIVPDPSPSLEELTEYANEHEITCILIVT-----NQKEKVKSFELERKSEKVVGRTELVEFLLQAL 1350 (1351)
T ss_pred cccceeeCCCcchHHHHHHHhcCceEEEEEEe-----cceeeechhHHhhhhhhhhhHHHHHHHHHHhh
Confidence 99999999888899999999988888887775 566666654 444555566788888876654
No 2
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-74 Score=670.78 Aligned_cols=408 Identities=21% Similarity=0.295 Sum_probs=349.4
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-Ccc---ccccEEEEeccCCCeeeecCCCcH
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELRL 854 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~~~~~~D~~G~~l~LRPD~T~ 854 (1239)
.|+|++|++|.++..+++++++++++|++|||.+|.||+| ++..+ |+. ..++||.|.|++|+.++||||+|+
T Consensus 6 ~prG~~D~lp~d~~~~~~i~~~~~~v~~~yGf~eI~TPifE~telf~r~~Ge~td~v~kemY~F~Dkggr~laLRpe~Ta 85 (429)
T COG0124 6 RPRGTRDFLPEDMALREYIESTIRKVFESYGFSEIRTPIFEYTELFARKSGEETDVVEKEMYTFKDKGGRSLALRPELTA 85 (429)
T ss_pred CCCCccccChHHHHHHHHHHHHHHHHHHHcCCEeccCccccchhHhhhccCCcccccccceEEEEeCCCCEEEecccCcH
Confidence 4899999999999999999999999999999999999999 44443 655 679999999999999999999999
Q ss_pred HHHHHHHhCCC---CceeEEeecCeEEcCCCCCCCCc-eeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEEC
Q 000880 855 PFIRWAISNQK---SSFKRYEISSVYRRAIGHSPPNR-YLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN 930 (1239)
Q Consensus 855 ~iaR~~~~~~~---~P~r~~Y~g~VfR~e~~~~~~~e-f~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg 930 (1239)
|+||++++|.. .|+|+||+|+|||||+||+||+| |+|+|+|+||.+++.+|||||+|+.++|++||+.+ ++|+||
T Consensus 86 pv~R~~~en~~~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~~~~~DAEvi~l~~~~l~~lGi~~-~~l~iN 164 (429)
T COG0124 86 PVARAVAENKLDLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSDSPDADAEVIALAVEILEALGIGG-FTLEIN 164 (429)
T ss_pred HHHHHHHhccccccCCeeEEEecceecCCCCCCCCceeeEEcCeEEeCCCCcccCHHHHHHHHHHHHHcCCCc-EEEEEc
Confidence 99999998753 59999999999999999988875 99999999999999999999999999999999997 999999
Q ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHH
Q 000880 931 HGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALP 1010 (1239)
Q Consensus 931 ~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~ 1010 (1239)
|+++++++++.+|+ +.+..+.++|++.++. + +..+.+........+.+..|. ...+...++++
T Consensus 165 ~~g~l~~~~~~~gi--~~~~~l~~~ldk~~k~-------------~-~~~L~e~~~~r~~~n~lr~ld-~k~~~~~~~~~ 227 (429)
T COG0124 165 SRGILEGRLEYLGI--DQREALLRYLDKLDKI-------------G-KLELDEDSKRRLKTNPLRVLD-SKKDSDQELLK 227 (429)
T ss_pred CcccHHHHHHhhcc--hhHHHHHHHHhhhhhH-------------H-HHHhhhhhhhhhhhchHHHHH-hccchHHHHHh
Confidence 99999999999999 7888999999998742 1 122222233333455555554 33444456666
Q ss_pred HHhccCCC-ChhHHHHHHHH--HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccchh
Q 000880 1011 RLRGALPA-DKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLL 1087 (1239)
Q Consensus 1011 ~l~~~~~~-~~~~~~~l~~l--~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~ 1087 (1239)
.+..++.. ..+..+.++++ +|+++|+ .+.+|++++||||||||+|||++..+.+ .+++||||||||+|+
T Consensus 228 ~ap~i~~~~~~e~~~~~~~v~~~L~~~g~--~~~id~~lvRGLDYYtg~VFE~~~~~~~------~~~sI~gGGRYD~Lv 299 (429)
T COG0124 228 NAPELLDYLDEESLEHLEELLALLDALGI--SYEIDPSLVRGLDYYTGTVFEAVTDGLG------AQGSVCGGGRYDGLV 299 (429)
T ss_pred ccHHhhhhccHHHHHHHHHHHHHHHHcCC--CEEEccceecchhhccceEEEEEEcCCc------cccceecCccchHHH
Confidence 66555543 33566777777 8999995 3999999999999999999999988644 367899999999999
Q ss_pred hhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHHcCCeEEEe
Q 000880 1088 HRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFV 1167 (1239)
Q Consensus 1088 ~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G~~ve~~ 1167 (1239)
+.||++ ++||||||+|+|||+.+|+......+...+++|+|++.+ ++...+|+.+|+.||++|++|++.
T Consensus 300 ~~~gG~----------~~pavGFaiGveRl~~~l~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~la~~LR~~g~~~~~~ 368 (429)
T COG0124 300 EEFGGK----------PTPAVGFAIGVERLILALEEEGKEDPVETRVDVYVVPLG-EDAEPEALKLAQKLRAAGISVEVD 368 (429)
T ss_pred HHhCCC----------CCCceeEehHHHHHHHHHHHcCCCCCcCCCCCEEEEEcC-chhHHHHHHHHHHHHHcCCcEEEE
Confidence 999765 579999999999999998744333445678899999997 555789999999999999999998
Q ss_pred eCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHH
Q 000880 1168 PVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1228 (1239)
Q Consensus 1168 ~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l 1228 (1239)
+. .+++++|+++|++.|++++||+|++|+++|+|+||||.+|+|..++++++++.+...+
T Consensus 369 ~~-~r~~k~q~k~A~~~g~~~~viiGe~E~~~g~v~vKdl~t~eq~~v~~~~~~~~~~~~~ 428 (429)
T COG0124 369 YS-GRKLKKQFKYADKLGARFAVILGEDELANGVVTVKDLATGEQEEVPLDELVEELKELL 428 (429)
T ss_pred ec-cccHHHHHHHHHHCCCCEEEEEcchHHhcCCEEEeeCCCCccceecHHHHHHHHHhhc
Confidence 88 6779999999999999999999999999999999999999999999999999887643
No 3
>KOG1936 consensus Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-73 Score=628.06 Aligned_cols=428 Identities=27% Similarity=0.453 Sum_probs=382.5
Q ss_pred cCCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCCCccccccEEEEeccCCCeeeecCCCcHHH
Q 000880 781 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 856 (1239)
Q Consensus 781 d~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~i 856 (1239)
-+.|+||+||.|.++.+++++.+.+.++|++||++.|+||+| ++.++..+..+.+|.|.|++|+.++||||+|+|+
T Consensus 60 lKtPKGTrD~~p~qm~lRe~if~~i~~vFkrhGa~~iDTPVFElkeiL~gKYGEdskLiYdlkDQGGEl~SLRYDLTVPf 139 (518)
T KOG1936|consen 60 LKTPKGTRDFSPEQMALREKIFSTIKEVFKRHGAETIDTPVFELKEILTGKYGEDSKLIYDLKDQGGELCSLRYDLTVPF 139 (518)
T ss_pred ecCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeccccchhHHHHHhhhcccccceeEehhhcCCcEEEeecccccHH
Confidence 368999999999999999999999999999999999999999 7778833444999999999999999999999999
Q ss_pred HHHHHhCCCCceeEEeecCeEEcCCC---CCCCCceeEEeEEEeCCCC-cccHHHHHHHHHHHHHhcCCCCceEEEECcH
Q 000880 857 IRWAISNQKSSFKRYEISSVYRRAIG---HSPPNRYLQGDFDIIGGAS-ALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 932 (1239)
Q Consensus 857 aR~~~~~~~~P~r~~Y~g~VfR~e~~---~~~~~ef~Q~GvEiiG~~s-~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~ 932 (1239)
||++|+|+...+++|+++.|||+++| ++|+||||||+++|.|.-+ ..+|+|++.++.++|+.|||.+ |.|++||+
T Consensus 140 ARylAmNki~sikRy~iAkVyRRd~P~mtrGR~REFYQcDFDIAG~~d~M~pdaE~lkiv~e~L~~l~Igd-~~iKvNhR 218 (518)
T KOG1936|consen 140 ARYLAMNKITSIKRYHIAKVYRRDQPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVVEILSRLGIGD-YGIKVNHR 218 (518)
T ss_pred HHHHHHcccccceeeeEEEEEeccCchhhchhhhhhhccCccccccCCCCCchHHHHHHHHHHHhhcCccc-eEEEecHH
Confidence 99999998889999999999999887 3556679999999999554 5899999999999999999985 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHH
Q 000880 933 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 1012 (1239)
Q Consensus 933 ~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 1012 (1239)
++++++++.+|+|++..+.++..+|++| |.+|++|++++..++|++++.++.+..++ .+.|. .+.++++
T Consensus 219 kiLdgmf~v~GVp~~~frtICSsIDKLd---------K~pwedVkkEmv~eKGlsee~ad~igeyv-~~~g~-~eL~e~l 287 (518)
T KOG1936|consen 219 KILDGMFAVCGVPEDKFRTICSSIDKLD---------KMPWEDVKKEMVFEKGLSEEAADRIGEYV-SLKGL-DELLEKL 287 (518)
T ss_pred HHHHHHHHHhCCCHHHhhhHHHhhhhhh---------cCCHHHHHHHHHHhcCCCHHHHHHHHHHh-hhccH-HHHHHHH
Confidence 9999999999999999999999999998 78999999999999999999999999999 56665 5666776
Q ss_pred hc--cCCCChhHHHHHHHH-----HHHHccCcccEEEccCCCCCCCccceeEEEEEecCC--CCcc---------ccccc
Q 000880 1013 RG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE--KYPA---------TLVEG 1074 (1239)
Q Consensus 1013 ~~--~~~~~~~~~~~l~~l-----~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~--~~~~---------~~~~~ 1074 (1239)
.. .+..|+...+++++| +++.+|+.++|.||+|++||+|||||+|||++..+. ..|. ..+..
T Consensus 288 ~~d~~l~~n~~a~eal~dlk~Lf~y~~~fg~s~~isfDlSLARGLDYYTGvIyEav~~~~~~~~~a~~~~~~~~~e~~~v 367 (518)
T KOG1936|consen 288 IADPKLSQNEAAKEALADLKQLFEYLEIFGISERISFDLSLARGLDYYTGVIYEAVLRGLRLICPAGRYDQAGSTEPGGV 367 (518)
T ss_pred hcCCcccccHHHHHHHHHHHHHHHHHHHcCCcceEEeehHHhccchhhhceeeeeeeccccccCcchhhhccccccCCCc
Confidence 64 466788899999998 889999999999999999999999999999998651 1111 12334
Q ss_pred ccccccccccchhhhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCc---CCCCCCCceEEEEecCCCccHHHHH
Q 000880 1075 TLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK---PVRNEAGTSVLVCSRGGGGLLVERM 1151 (1239)
Q Consensus 1075 ~~i~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~---~~~~~~~~~v~v~~~~~~~~~~~a~ 1151 (1239)
++||+|||||+|+++|+.. +..+|+||+++|++||+.+|++... .......++|+|...+ ...+.+++
T Consensus 368 GSvaaGGRYDnLv~mf~~k--------~~~vPcvG~S~GVeRiFsile~r~~~~~~~iR~t~t~V~V~~~~-k~~l~eR~ 438 (518)
T KOG1936|consen 368 GSVAAGGRYDNLVGMFDKK--------GDKVPCVGQSVGVERIFSILEQRAATVATKIRTTETQVYVAAAG-KNLLFERL 438 (518)
T ss_pred cccccCcchhhHHHHhccc--------cCcCCccceeehHhHHHHHHHHHHHhhhhccccCceEEEEEecC-CchHHHHH
Confidence 6899999999999998643 3468999999999999999973221 1234567889998886 67899999
Q ss_pred HHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHH
Q 000880 1152 ELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1229 (1239)
Q Consensus 1152 ~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~ 1229 (1239)
++++.||..||.++..+..++++.+|+.||++.|||++||+|++|+++|.|+||++.+++.+.++.++++..|++.++
T Consensus 439 k~v~~Lw~agI~aE~~yk~~~~~~~q~~~~e~~~ip~~vi~Ge~El~~G~V~vk~~~~re~~~v~~e~~v~~l~~~l~ 516 (518)
T KOG1936|consen 439 KVVNALWDAGIKAEYLYKANPKLLKQFQYAEEAGIPLAVILGEEELADGSVKVKNVGTREEVLVKREQFVSELKDLLS 516 (518)
T ss_pred HHHHHHHhcCcchhhhhhcCccHHHHHHHHHhcCCCeEEEechhhhcCCeEEEEecccccceeccHHHHHHHHHHHhc
Confidence 999999999999999999889999999999999999999999999999999999999999999999999999998875
No 4
>PLN02972 Histidyl-tRNA synthetase
Probab=100.00 E-value=2.1e-71 Score=674.41 Aligned_cols=416 Identities=25% Similarity=0.402 Sum_probs=366.8
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-CccccccEEEEeccCCCeeeecCCCcHHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 856 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~~~~~~D~~G~~l~LRPD~T~~i 856 (1239)
+.|+|++|++|.++..++++++.++++|++|||++|.||+| .+.++ +++ .++||+|.|++|+.++||||+|+||
T Consensus 328 k~PkGtrD~lP~e~~~re~I~~~L~~vFk~hGy~eI~TPvfE~~Ell~~k~Ged-~k~mY~f~D~gGr~LaLRPDlTvPi 406 (763)
T PLN02972 328 KIPKGTRDFAKEQMAIREKAFSIITSVFKRHGATALDTPVFELRETLMGKYGED-SKLIYDLADQGGELCSLRYDLTVPF 406 (763)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCEEccCCcccchHHhhcccCcc-hhheEEEECCCCCEEEeCCCChHHH
Confidence 78999999999999999999999999999999999999999 34445 444 5789999999999999999999999
Q ss_pred HHHHHhCCCCceeEEeecCeEEcCCCCCCCC-ceeEEeEEEeCCC-CcccHHHHHHHHHHHHHhcCCCCceEEEECcHHH
Q 000880 857 IRWAISNQKSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDL 934 (1239)
Q Consensus 857 aR~~~~~~~~P~r~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~-s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i 934 (1239)
||+++++...|+|+||+|+|||+++|++|+. ||+|+||||||.. +..+|+|||.++.++|+.||+.+ |+|+|||+++
T Consensus 407 AR~vA~n~~~p~KrYyiG~VFR~e~pqkGR~REF~Q~G~EIIG~~~~~~aDAEVI~La~E~L~~LGi~d-f~I~INh~~i 485 (763)
T PLN02972 407 ARYVAMNGITSFKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGVYEPMGPDFEIIKVLTELLDELDIGT-YEVKLNHRKL 485 (763)
T ss_pred HHHHHhCCCCcceEEEeccEEecCCCCCCCCccceEEeEEEEcCCCcchhhHHHHHHHHHHHHhCCCCc-eEEEeCCHHH
Confidence 9999998777999999999999999987765 6999999999974 45799999999999999999986 9999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHHhc
Q 000880 935 LEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 1014 (1239)
Q Consensus 935 ~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~ 1014 (1239)
++++++.+|++++..+.++.++++++ +.++++++++++...+++++.++.+..++ .+.|++.++++.++.
T Consensus 486 L~~ILe~lgi~~e~~~~v~~aIdkld---------k~~le~vk~eL~~~~gLs~e~~~~L~~L~-~L~G~~~evLd~L~~ 555 (763)
T PLN02972 486 LDGMLEICGVPPEKFRTICSSIDKLD---------KQSFEQVKKEMVEEKGLSNETADKIGNFV-KERGPPLELLSKLRQ 555 (763)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhh---------hhhHHHHHHHHhhhcCCCHHHHHHHHHHH-HhcCCHHHHHHHHHH
Confidence 99999999999999999999999987 56788888889888899999999999998 688887888888865
Q ss_pred c---CCCChhHHHHHHHH-----HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccch
Q 000880 1015 A---LPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1086 (1239)
Q Consensus 1015 ~---~~~~~~~~~~l~~l-----~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L 1086 (1239)
. +..++.+.+++++| ++..+|+.+++.||++++||++||||+|||+|..+.+ .++||+|||||+|
T Consensus 556 ~~~~l~~~~~~~~aL~eL~~L~~~L~~~gv~~~I~fDlsLvRGLDYYTGiVFE~~~~g~~-------~gsIagGGRYD~L 628 (763)
T PLN02972 556 EGSEFLGNASSRAALDELEIMFKALEKSKAIGKIVFDLSLARGLDYYTGVIYEAVFKGAQ-------VGSIAAGGRYDNL 628 (763)
T ss_pred hhHhhccChHHHHHHHHHHHHHHHHHhcCCCccEEECCcccCCCcccCceEEEEEEcCCc-------cceeeecCCchhH
Confidence 3 34566677788877 7788888888999999999999999999999987532 1479999999999
Q ss_pred hhhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCc-C--CCCCCCceEEEEecCCCccHHHHHHHHHHHHHcCCe
Q 000880 1087 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK-P--VRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIK 1163 (1239)
Q Consensus 1087 ~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~-~--~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G~~ 1163 (1239)
+++||+. ++||||||||+|||+.+|+.... . ...+.+++|+|++.+ ++.+.+++++++.||+.||+
T Consensus 629 v~~FgG~----------~vPAVGFSiGIERL~~~L~~~~~~~~~~~~~~~~dVlV~s~g-~~~l~~alkia~~LR~aGI~ 697 (763)
T PLN02972 629 VGMFSGK----------QVPAVGVSLGIERVFAIMEQQEEEKSQVIRPTETEVLVSIIG-DDKLALAAELVSELWNAGIK 697 (763)
T ss_pred HHhcCCC----------CCCEEEEEecHHHHHHHHHHcccCCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHHCCCE
Confidence 9999643 57999999999999988863221 1 123345789999985 66788999999999999999
Q ss_pred EEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHH
Q 000880 1164 AQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1229 (1239)
Q Consensus 1164 ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~ 1229 (1239)
+++.+ .++++++++||++.|++++||+|++|.++|+|+||||.+++|..|++++++.+|+..+.
T Consensus 698 aE~~~--~~kl~kq~~~A~k~gi~~vVIIGe~E~~~g~VkVKnL~tgeq~~V~~delv~~l~~~l~ 761 (763)
T PLN02972 698 AEYKV--STRKAKHLKRAKESGIPWMVLVGEKELSKGFVKLKNLEAGVEEEVDRTCFVQELKAELL 761 (763)
T ss_pred EEEeC--CCCHHHHHHHHHHCCCCEEEEECchHHhCCeEEEEECCCCcceEeeHHHHHHHHHHHhc
Confidence 99644 46899999999999999999999999999999999999999999999999999988775
No 5
>PLN02530 histidine-tRNA ligase
Probab=100.00 E-value=7.7e-67 Score=631.49 Aligned_cols=403 Identities=19% Similarity=0.245 Sum_probs=345.3
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-CccccccEEEEeccCCCeeeecCCCcHHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 856 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~~~~~~D~~G~~l~LRPD~T~~i 856 (1239)
..|+|++|++|.++.+++++++.++++|++|||++|.||+| ++..+ ++...++||+|.|++|+.++||||+|+|+
T Consensus 71 ~~p~G~~D~lp~~~~~~~~i~~~~~~~~~~~Gy~~I~tP~lE~~el~~~~~g~~~~~~~y~f~D~~g~~l~LRpD~T~~i 150 (487)
T PLN02530 71 NPPKGTRDFPPEDMRLRNWLFDHFREVSRLFGFEEVDAPVLESEELYIRKAGEEITDQLYNFEDKGGRRVALRPELTPSL 150 (487)
T ss_pred CCCCCcCcCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHhccccCcccccceEEEECCCCCEEecCCCCcHHH
Confidence 46899999999999999999999999999999999999999 44444 77789999999999999999999999999
Q ss_pred HHHHHhCC---CCceeEEeecCeEEcCCCCCCCC-ceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCC-ceEEEECc
Q 000880 857 IRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAE-SCDIHLNH 931 (1239)
Q Consensus 857 aR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~-~~~i~lg~ 931 (1239)
||+++++. ..|+|+||+|+|||++++++++. ||+|+|+|+||.+++.+|+|||+++.++|+.||+++ +++|+|||
T Consensus 151 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~q~gr~REf~Q~giEiiG~~~~~aDaEvi~l~~~~l~~lgl~~~~~~i~i~~ 230 (487)
T PLN02530 151 ARLVLQKGKSLSLPLKWFAIGQCWRYERMTRGRRREHYQWNMDIIGVPGVEAEAELLAAIVTFFKRVGITSSDVGIKVSS 230 (487)
T ss_pred HHHHHhcccccCCCeEEEEEcCEEcCcCCCCCCccceEEcCeeEeCCCCcchhHHHHHHHHHHHHHcCCCCCceEEEEcC
Confidence 99999864 35999999999999999887765 799999999999999999999999999999999962 49999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHH
Q 000880 932 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 1011 (1239)
Q Consensus 932 ~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 1011 (1239)
+++++++++.++++++.+..++.++++++ +.+.++++.. +...+++.+.++.+..++ .+. .+++
T Consensus 231 ~~i~~~~l~~~~~~~~~~~~v~~~~d~l~---------k~~~~~l~~~-L~~~~~~~~~~~~l~~l~-~~~-----~~~~ 294 (487)
T PLN02530 231 RKVLQAVLKSYGIPEESFAPVCVIVDKLE---------KLPREEIEKE-LDTLGVSEEAIEGILDVL-SLK-----SLDD 294 (487)
T ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHhhh---------hccHHHHHHH-HHHcCCCHHHHHHHHHHH-hcc-----CHHH
Confidence 99999999999999988888888888877 3455666555 456888888888887777 222 2445
Q ss_pred HhccCCCChhHHHHHHHH--HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccchhhh
Q 000880 1012 LRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1089 (1239)
Q Consensus 1012 l~~~~~~~~~~~~~l~~l--~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~~~ 1089 (1239)
+..++.......+.|+++ +++.+|+.+++.|||+++||++||||+|||+|... +..++||+|||||+|++.
T Consensus 295 l~~~~~~~~~~l~~L~~l~~~l~~~g~~~~i~~Dl~lvrgldYYTGivFe~~~~~-------~~~~~I~gGGRYD~Li~~ 367 (487)
T PLN02530 295 LEALLGADSEAVADLKQLFSLAEAYGYQDWLVFDASVVRGLAYYTGIVFEGFDRA-------GKLRAICGGGRYDRLLST 367 (487)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHcCCCccEEEecccccCccccCceEEEEEecC-------CCcceeeecccHHHHHHH
Confidence 555443222344555555 88889998889999999999999999999999742 123479999999999999
Q ss_pred ccccccccccCCCCCCceeeeeccHHHHHhhCCC-CCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHHcCCeEEEee
Q 000880 1090 MWDREYVGYASRTNPPSGVGASLALETIIQHYPV-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVP 1168 (1239)
Q Consensus 1090 fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~-~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G~~ve~~~ 1168 (1239)
||+. ++||||||+|++||+.+++. +..+. ...+.+|+|++.+ ++...+|+++|+.||+.|++|++.+
T Consensus 368 fgg~----------~~pAvGFa~g~~~l~~~l~~~g~~p~-~~~~~dVlVi~~~-~~~~~~A~~ia~~LR~~Gi~vevd~ 435 (487)
T PLN02530 368 FGGE----------DTPACGFGFGDAVIVELLKEKGLLPE-LPHQVDDVVFALD-EDLQGAAAGVASRLREKGRSVDLVL 435 (487)
T ss_pred hCCC----------CCCeeEEEEhHHHHHHHHHhcCCCCC-CCCCCcEEEEEcC-hHHHHHHHHHHHHHHHCCCeEEEec
Confidence 9754 46999999999999888763 33333 2356789999985 6678899999999999999999887
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHH
Q 000880 1169 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1220 (1239)
Q Consensus 1169 ~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el 1220 (1239)
. .+++++++++|++.|+++++++|++|.++++|+||||.+|+|..|++++|
T Consensus 436 ~-~~~l~k~ik~A~k~g~~~iviiG~~E~~~~~V~vK~l~sgeq~~v~~~el 486 (487)
T PLN02530 436 E-PKKLKWVFKHAERIGAKRLVLVGASEWERGMVRVKDLSSGEQTEVKLDEL 486 (487)
T ss_pred C-CCCHHHHHHHHHHCCCCEEEEEchhHHhCCeEEEEECCCCcceEechHHc
Confidence 7 56899999999999999999999999999999999999999999988765
No 6
>PRK12420 histidyl-tRNA synthetase; Provisional
Probab=100.00 E-value=1.6e-64 Score=604.74 Aligned_cols=402 Identities=21% Similarity=0.338 Sum_probs=342.9
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccC---CCccccccEEEEeccCCCeeeecCCCcH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHGGDLLELSHELRL 854 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~~~~~~D~~G~~l~LRPD~T~ 854 (1239)
..|+|++|++|.++.+++++++.++++|++|||++|.||+| ++.. .++...++||+|.|++|+.|+||||+|+
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~~~~~~~~~~~~~~~~~~~~~~D~~g~~l~LRpD~T~ 84 (423)
T PRK12420 5 RNVKGTKDYLPEEQVLRNKIKRALEDVFERYGCKPLETPTLNMYELMSSKYGGGDEILKEIYTLTDQGKRDLALRYDLTI 84 (423)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHHhcccCCCcccccceEEEecCCCceecccccccH
Confidence 36899999999999999999999999999999999999999 3333 2466779999999999999999999999
Q ss_pred HHHHHHHhCC--CCceeEEeecCeEEcCCCCCCC-CceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEECc
Q 000880 855 PFIRWAISNQ--KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 931 (1239)
Q Consensus 855 ~iaR~~~~~~--~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 931 (1239)
||||+++++. ..|+|+||+|+|||++++++++ +||+|+|+|+||.+++.+|+|||+++.++|+.||+ + +.|+|||
T Consensus 85 ~iaR~va~~~~~~~p~r~~y~g~vfR~~~~~~gr~rE~~Q~g~EiiG~~~~~adaEvi~la~~~l~~lg~-~-~~i~l~~ 162 (423)
T PRK12420 85 PFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVESVMAEAELMSMAFELFRRLNL-E-VTIQYNN 162 (423)
T ss_pred HHHHHHHhCcCCCCCeeEEEEcceECCCCCCCCccceeEECCeeeECCCCCcccHHHHHHHHHHHHHCCC-C-EEEEEcC
Confidence 9999999864 4599999999999998877555 57999999999999999999999999999999999 4 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHH
Q 000880 932 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 1011 (1239)
Q Consensus 932 ~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 1011 (1239)
+++++++++.+|++++.++.++.++++++ +.++.++++.+ .+.+++++.++.+..|+ .+++. ..++.
T Consensus 163 ~~l~~~il~~~~~~~~~~~~~~~~ld~~~---------~~~~~~~~~~l-~~~~l~~~~~~~l~~l~-~~~~~--~~~~~ 229 (423)
T PRK12420 163 RKLLNGILQAIGIPTELTSDVILSLDKIE---------KIGIDGVRKDL-LERGISEEMADTICNTV-LSCLQ--LSIAD 229 (423)
T ss_pred HHHHHHHHHHcCCChhhhhchhhheechh---------hcCHHHHHHHH-HHcCCCHHHHHHHHHHH-hccCh--hhHHH
Confidence 99999999999999998888877777665 44566665555 44789999999999988 45543 34666
Q ss_pred HhccCCCChhHHHHHHHH-----HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccch
Q 000880 1012 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1086 (1239)
Q Consensus 1012 l~~~~~~~~~~~~~l~~l-----~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L 1086 (1239)
++..+ .++.+.+++++| .++.+|+..++.||++++|+++||||+|||+|..+.+ ...+||+|||||+|
T Consensus 230 ~~~~~-~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~Dl~~vr~l~YYtG~vFe~~~~~~~------~~~~i~~GGRYD~L 302 (423)
T PRK12420 230 FKEAF-NNPLVAEGVNELQQLQQYLIALGINENCIFNPFLARGLTMYTGTVYEIFLKDGS------ITSSIGSGGRYDNI 302 (423)
T ss_pred HHHhc-cCHHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccCCCcccceeEEEEEecCCC------ccccccCCccHHHH
Confidence 66533 456666677766 7888898888999999999999999999999987632 12369999999999
Q ss_pred hhhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHH-cCCeEE
Q 000880 1087 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE-ENIKAQ 1165 (1239)
Q Consensus 1087 ~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~-~G~~ve 1165 (1239)
+++||+. +.++||||||+++|||+.++..... ...+.+|+|++.+ + ...|++++++||+ .|++|+
T Consensus 303 ~~~f~~~--------~~~~pAvGfa~~~~~l~~~l~~~~~---~~~~~dvlI~~~~-~--~~~a~~ia~~Lr~~~Gi~ve 368 (423)
T PRK12420 303 IGAFRGD--------DMNYPTVGISFGLDVIYTALSQKET---ISSTADVFIIPLG-T--ELQCLQIAQQLRSTTGLKVE 368 (423)
T ss_pred HHHhCCC--------CCCCCceeEEEcHHHHHHHHHhcCC---CCCCceEEEEEcC-C--HHHHHHHHHHHHhhcCCeEE
Confidence 9998542 2357999999999999988763221 1246799999974 3 3579999999999 999999
Q ss_pred EeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHH
Q 000880 1166 FVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1220 (1239)
Q Consensus 1166 ~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el 1220 (1239)
+... .+++++++++|++.|+++++++|++|.++++|+||++.+++|..++++++
T Consensus 369 ~~~~-~~~l~~~i~~A~~~g~~~iviig~~e~~~~~v~vr~~~~~~~~~v~~~~~ 422 (423)
T PRK12420 369 LELA-GRKLKKALNYANKENIPYVLIIGEEEVSTGTVMLRNMKEGSEVKVPLSSL 422 (423)
T ss_pred EecC-CcCHHHHHHHHHHcCCCEEEEEChhHHhcCeEEEEECCCCceeeeeHHHc
Confidence 8887 67899999999999999999999999999999999999999999998875
No 7
>CHL00201 syh histidine-tRNA synthetase; Provisional
Probab=100.00 E-value=1.2e-62 Score=587.52 Aligned_cols=402 Identities=15% Similarity=0.167 Sum_probs=313.1
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-Ccc---ccccEEEEeccCCCeeeecCCCc
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELR 853 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~~~~~~D~~G~~l~LRPD~T 853 (1239)
..|+|++|++|.++..++.+++.++++|++|||++|.||+| ++... |+. ..++||+|.|.+|+.++||||+|
T Consensus 5 ~~p~G~~D~lp~~~~~~~~i~~~i~~~~~~~Gy~~I~TP~~E~~e~~~~~~G~~~~~~~~~my~~~d~~g~~l~LRpd~T 84 (430)
T CHL00201 5 QAIRGTKDILPDEINYWQFIHDKALTLLSLANYSEIRTPIFENSSLYDRGIGETTDIVNKEMYRFTDRSNRDITLRPEGT 84 (430)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeecCcccchHHHHhcccCCcccccccceEEEEcCCCCEEEeCCCCc
Confidence 36899999999999999999999999999999999999999 33333 433 46899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEeecCeEEcCCCCCCCC-ceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEE
Q 000880 854 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 928 (1239)
Q Consensus 854 ~~iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~ 928 (1239)
+|+||+++++. ..|+|+||+|+|||+++||.||. ||+|+|+|+||..++.||+|||.++.++|+.||+++ ++|+
T Consensus 85 ~~iaR~~~~~~~~~~~~p~R~~y~g~vfR~e~~q~GR~Ref~Q~g~EiiG~~~~~aD~Evi~l~~~~l~~lGl~~-~~i~ 163 (430)
T CHL00201 85 AGIVRAFIENKMDYHSNLQRLWYSGPMFRYERPQSGRQRQFHQLGIEFIGSIDARADTEVIHLAMQIFNELQVKN-LILD 163 (430)
T ss_pred HHHHHHHHHccccccCCCeEEEEEcceecCCCCcCCccceeEEeceEEECCCChhhHHHHHHHHHHHHHHcCCCc-eEEE
Confidence 99999887753 24899999999999999987665 699999999999999999999999999999999986 9999
Q ss_pred ECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHH----HHhcCC
Q 000880 929 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG----LRFCGA 1004 (1239)
Q Consensus 929 lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~----~~~~g~ 1004 (1239)
|||++++... ....+.+..++.... ..++....+.+..++ ......
T Consensus 164 l~~~~~~~~~-------~~~~~~l~~~l~~~~-----------------------~~~~~~~~~~l~~~~~~~l~~k~~~ 213 (430)
T CHL00201 164 INSIGKLEDR-------QSYQLKLVEYLSQYQ-----------------------DDLDTDSQNRLYSNPIRILDSKNLK 213 (430)
T ss_pred ECCCCchhhH-------HHHHHHHHHHHHHHH-----------------------hhcCHHHHHHHHhhhHHHhhccCcc
Confidence 9998887631 111122222222210 001111111221111 000001
Q ss_pred hhhHHHHHhccCC-CChhHHHHHHHH--HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccc
Q 000880 1005 ADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1081 (1239)
Q Consensus 1005 ~~~~l~~l~~~~~-~~~~~~~~l~~l--~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GG 1081 (1239)
..++++.+..+.. .+....+.|+++ .+..+|+ .+.+|++++||++||||+|||+|+...+ ..++|||||
T Consensus 214 ~~~~~~~a~~l~~~~~~~~~~~l~~~~~~l~~~g~--~~~~Dl~lvRgldYYTG~vFE~~~~~~~------~~~~i~gGG 285 (430)
T CHL00201 214 TQEILDGAPKISDFLSLESTEHFYDVCTYLNLLNI--PYKINYKLVRGLDYYNDTAFEIKTLSSN------GQDTICGGG 285 (430)
T ss_pred HHHHHhhhHHHHhhhhHHHHHHHHHHHHHHHHcCC--cEEECcccccCCccccccEEEEEECCCC------Ccceeeecc
Confidence 1122222222111 123344455555 6677787 4999999999999999999999986422 224799999
Q ss_pred cccchhhhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHHcC
Q 000880 1082 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1161 (1239)
Q Consensus 1082 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G 1161 (1239)
|||+|+++||+. ++||||||+|+|||+.+|++... . ...+.+|+|++.+ +....+|+++++.||++|
T Consensus 286 RYD~L~~~fg~~----------~~PavGfa~g~erl~~~l~~~~~-~-~~~~~~v~v~~~~-~~~~~~a~~ia~~LR~~G 352 (430)
T CHL00201 286 RYDSLIHQLGGP----------KTPAVGCAIGLERLLLIAKDNII-L-PKQSIDVYIATQG-LKAQKKGWEIIQFLEKQN 352 (430)
T ss_pred chHHHHHHhCCC----------CCCeeEEEecHHHHHHHHhcccc-C-CCCCCCEEEEEcC-HHHHHHHHHHHHHHHhCC
Confidence 999999999754 46999999999999998864322 1 2245689999875 667889999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHhhccCCC
Q 000880 1162 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPS 1236 (1239)
Q Consensus 1162 ~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~~~~~~~ 1236 (1239)
++|++++. .+++++++++|++.|+++++|+|++|.++++|+||||.+++|.+++++++++.+.++.+..--|++
T Consensus 353 i~veid~~-~~~l~k~~k~A~~~~~~~viiiG~~E~~~~~vtvk~l~~~~q~~i~~~~~~~~~~~~~~~~~~~~~ 426 (430)
T CHL00201 353 IKFELDLS-SSNFHKQIKQAGKKRAKACIILGDNEIMDNCITIKWLDEQVQENAQYSNFKQEISYLKKKIAFNKK 426 (430)
T ss_pred CeEEEeeC-CCCHHHHHHHHHHcCCCEEEEEechHHhCCcEEEEECCCCCcEEEcHHHHHHHHHHHHHhhhhhhc
Confidence 99998876 568999999999999999999999999999999999999999999999999999988877655544
No 8
>PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=3.3e-60 Score=560.86 Aligned_cols=360 Identities=21% Similarity=0.265 Sum_probs=309.1
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-CccccccEEEEecc-CCCeeeecCCCcHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 855 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~~~~~~D~-~G~~l~LRPD~T~~ 855 (1239)
..|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++...++||+|.|+ +|+.++||||+|+|
T Consensus 4 ~~p~G~~D~lp~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~e~~~~~~g~~~~~~~~~f~d~~~g~~l~LRpD~T~~ 83 (391)
T PRK12292 4 QLPEGIRDLLPEEARKIEEIRRRLLDLFRRWGYEEVITPTLEYLDTLLAGGGAILDLRTFKLVDQLSGRTLGLRPDMTAQ 83 (391)
T ss_pred CCCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCceeeCcchhhHHHHhccCCccchhhhEEEeecCCCCEEEECCCCcHH
Confidence 46899999999999999999999999999999999999999 34344 66778999999999 89999999999999
Q ss_pred HHHHHHhCC---CCceeEEeecCeEEcCCCCCCCC-ceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEECc
Q 000880 856 FIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 931 (1239)
Q Consensus 856 iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 931 (1239)
+||+++++. ..|+|+||+|+|||+++++.++. ||+|+|+|+||.+++.+|+|||.++.++|+.+|+.+ +.|+|||
T Consensus 84 iaR~~a~~~~~~~~p~r~~y~g~vfR~~~~~~gr~ref~Q~g~EiiG~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~i~~ 162 (391)
T PRK12292 84 IARIAATRLANRPGPLRLCYAGNVFRAQERGLGRSREFLQSGVELIGDAGLEADAEVILLLLEALKALGLPN-FTLDLGH 162 (391)
T ss_pred HHHHHHHhccCCCCCeEEEeeceeeecCCCcCCCccchhccceEEeCCCCchHHHHHHHHHHHHHHHcCCCC-eEEEecc
Confidence 999998853 45999999999999998886655 699999999999999999999999999999999985 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHH
Q 000880 932 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 1011 (1239)
Q Consensus 932 ~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 1011 (1239)
+++++++++.+|+++++++.++.+++++|+ .+.+ ++.. +++.+.++.+..++ .+.| ..++++.
T Consensus 163 ~~i~~~il~~~~~~~~~~~~l~~~l~~~~~---------~~~~----~~~~--~l~~~~~~~l~~l~-~~~g-~~~~l~~ 225 (391)
T PRK12292 163 VGLFRALLEAAGLSEELEEVLRRALANKDY---------VALE----ELVL--DLSEELRDALLALP-RLRG-GREVLEE 225 (391)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcCH---------HHHH----HHHh--cCCHHHHHHHHHHH-HhcC-CHHHHHH
Confidence 999999999999999999999999999883 2222 2222 68888899999998 5777 5688888
Q ss_pred HhccCCCChhHHHHHHHH-----HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccch
Q 000880 1012 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1086 (1239)
Q Consensus 1012 l~~~~~~~~~~~~~l~~l-----~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L 1086 (1239)
+..+.. +..+.+++++| .+..+|+..++.|||+++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 226 ~~~~~~-~~~~~~~l~~L~~l~~~l~~~~~~~~i~~D~~lvrgl~YYtG~vFe~~~~~~~~--------~i~~GGRYD~L 296 (391)
T PRK12292 226 ARKLLP-SLPIKRALDELEALAEALEKYGYGIPLSLDLGLLRHLDYYTGIVFEGYVDGVGN--------PIASGGRYDDL 296 (391)
T ss_pred HHHhcc-ChHHHHHHHHHHHHHHHHHHhCCCceEEEehhhccCCcCccceEEEEEECCCCC--------cccCCcchhhH
Confidence 887544 55556677777 67777887789999999999999999999999987654 59999999999
Q ss_pred hhhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHHcCCeEEE
Q 000880 1087 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1166 (1239)
Q Consensus 1087 ~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G~~ve~ 1166 (1239)
+++||. ++||||||+++|||+.+ . . .....+.+++|++.+ +....+|+++++.||+.|++|++
T Consensus 297 ~~~fg~-----------~~pAvGfai~ldrl~~~-~-~---~~~~~~~~~~v~~~~-~~~~~~a~~~~~~Lr~~G~~~~~ 359 (391)
T PRK12292 297 LGRFGR-----------ARPATGFSLDLDRLLEL-Q-L---ELPVEARKDLVIAPD-SEALAAALAAAQELRKKGEIVVL 359 (391)
T ss_pred HHHcCC-----------CCCCceEEeeHHHHHhh-c-c---ccccccCCcEEEEeC-cccHHHHHHHHHHHHHcCCEEEE
Confidence 998853 46999999999999874 1 1 112234567777764 56778999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCC
Q 000880 1167 VPVPDPSLTEQYEYASEHDI 1186 (1239)
Q Consensus 1167 ~~~~~~~l~k~~~~A~~~g~ 1186 (1239)
.+. .+++++++++|++.|+
T Consensus 360 ~~~-~~~~~~~~~~a~~~~~ 378 (391)
T PRK12292 360 ALP-GRNFEDAREYARDRQI 378 (391)
T ss_pred ecC-CCChHHHHHHHhhcCe
Confidence 877 5689999999999998
No 9
>PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=6.2e-58 Score=538.96 Aligned_cols=362 Identities=18% Similarity=0.206 Sum_probs=301.7
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-CccccccEEEEecc-CCCeeeecCCCcHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 855 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~~~~~~D~-~G~~l~LRPD~T~~ 855 (1239)
..|+|++|++|.++..++++++.++++|++|||++|.||+| ++... ++..++.||+|.|+ +|+.++||||+|+|
T Consensus 8 ~~p~G~rD~lp~e~~~~~~i~~~l~~~f~~~Gy~~I~tP~~E~~e~~~~~~g~~~~~~~y~f~D~~~g~~l~LRpD~T~~ 87 (392)
T PRK12421 8 LLPDGVADVLPEEAQKIERLRRRLLDLFASRGYQLVMPPLIEYLESLLTGAGQDLKLQTFKLIDQLSGRLMGVRADITPQ 87 (392)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeCcchhhHHHHhccCCccchhceEEEEcCCCCcEEEECCcCCHH
Confidence 46899999999999999999999999999999999999999 34444 77778899999999 69999999999999
Q ss_pred HHHHHHhC--CCCceeEEeecCeEEcCCCCCC-CCceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEECcH
Q 000880 856 FIRWAISN--QKSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 932 (1239)
Q Consensus 856 iaR~~~~~--~~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~ 932 (1239)
|||+++++ ...|+|+||+|+|||+++++.+ .+||+|+|+|+||.+++.+|+|||.++.++|++||+++ ++|+|||+
T Consensus 88 iaR~~a~~~~~~~p~R~~Y~g~VfR~~~~~~gr~rEf~Q~GvEiiG~~~~~aDaEvi~l~~e~l~~lgi~~-~~l~ig~~ 166 (392)
T PRK12421 88 VARIDAHLLNREGVARLCYAGSVLHTLPQGLFGSRTPLQLGAELYGHAGIEADLEIIRLMLGLLRNAGVPA-LHLDLGHV 166 (392)
T ss_pred HHHHHHhhcCCCCceEEEEeeeEEEcCCCcCCCcCccceeceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCCH
Confidence 99998875 3469999999999999887754 45799999999999999999999999999999999986 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHH
Q 000880 933 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 1012 (1239)
Q Consensus 933 ~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 1012 (1239)
++++++++.+|++++.++.++++++++++. .. .+++...+++...++.+..++ .+.|+. +.++.+
T Consensus 167 ~i~~~il~~l~l~~~~~~~l~~~l~kk~~~---------~l----~~~~~~~~~~~~~~~~l~~L~-~~~g~~-~~l~~~ 231 (392)
T PRK12421 167 GIFRRLAELAGLSPEEEEELFDLLQRKALP---------EL----AEVCQNLGVGSDLRRMFYALA-RLNGGL-EALDRA 231 (392)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCHH---------HH----HHHHHhcCCCHHHHHHHHHHH-HhcCCH-HHHHHH
Confidence 999999999999999999999999988832 22 334455678888888899988 567764 455665
Q ss_pred hccCC-CChhHHHHHHHH-----HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccch
Q 000880 1013 RGALP-ADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1086 (1239)
Q Consensus 1013 ~~~~~-~~~~~~~~l~~l-----~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L 1086 (1239)
...+. .++.+.+++++| .+..++....+.||++++||++||||+|||+|.++.+. +||+|||||+|
T Consensus 232 ~~~~~~~~~~~~~~l~~L~~l~~~l~~~~~~~~~~~DlslvrgldYYTG~vFe~~~~~~~~--------~i~~GGRYD~L 303 (392)
T PRK12421 232 LSVLALQDAAIRQALDELKTLAAHLKNRWPELPVSIDLAELRGYHYHTGLVFAAYIPGRGQ--------ALARGGRYDGI 303 (392)
T ss_pred HhhcccCCHHHHHHHHHHHHHHHHHHhhCCCceEEEeeccccCCCCcCCCEEEEEECCCCC--------cccCCCCccch
Confidence 55443 567788888888 45555444569999999999999999999999987554 69999999999
Q ss_pred hhhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHHcCCeEEE
Q 000880 1087 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1166 (1239)
Q Consensus 1087 ~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G~~ve~ 1166 (1239)
+++||. +.||||||||+|||+.+++.. . ..++++++.+ +. ..+++++++||+.|++|++
T Consensus 304 ~~~fg~-----------~~pAvGfai~lerL~~~l~~~-----~--~~~~~~~~~~-~~--~~~~~~a~~LR~~G~~~~~ 362 (392)
T PRK12421 304 GEAFGR-----------ARPATGFSMDLKELLALQFLE-----E--EAGAILAPWG-DD--PDLLAAIAELRQQGERVVQ 362 (392)
T ss_pred hHhhCC-----------CCCCceEEeeHHHHHhhcccc-----c--CCceEEeecC-Cc--HHHHHHHHHHHhCCCEEEE
Confidence 998864 369999999999999876421 1 1266777764 32 5688999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCCcEEEEEcCC
Q 000880 1167 VPVPDPSLTEQYEYASEHDIKCLVILTDT 1195 (1239)
Q Consensus 1167 ~~~~~~~l~k~~~~A~~~g~~~~viig~~ 1195 (1239)
.+.. .-.+| +.++...+++++.
T Consensus 363 ~~~~------~~~~~-~~~~~~~~~~~~~ 384 (392)
T PRK12421 363 LLPG------DDGSS-EPGCDHRLVLQDG 384 (392)
T ss_pred eCCC------cchhH-HhCCCeEEEEECC
Confidence 7652 22345 6699999999854
No 10
>TIGR00442 hisS histidyl-tRNA synthetase. This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff.
Probab=100.00 E-value=1.6e-56 Score=533.60 Aligned_cols=380 Identities=21% Similarity=0.280 Sum_probs=310.0
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-Ccc---ccccEEEEeccCCCeeeecCCCcH
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELRL 854 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~~~~~~D~~G~~l~LRPD~T~ 854 (1239)
.|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++. ..++||+|.|++|+.++||||+|+
T Consensus 2 ~p~G~~d~~p~~~~~~~~i~~~i~~~f~~~Gy~~i~~P~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpD~T~ 81 (397)
T TIGR00442 2 APRGTRDFLPEEMIKWQYIEETIREVFELYGFKEIRTPIFEYTELFARKVGEETDIVEKEMYTFKDKGGRSLTLRPEGTA 81 (397)
T ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHHHHcCCeEecCcccchHHHhhhccCccccccccceEEEECCCCCEEeecCCCcH
Confidence 5899999999999999999999999999999999999999 33333 232 458999999999999999999999
Q ss_pred HHHHHHHhCC---CCceeEEeecCeEEcCCCCCC-CCceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEEC
Q 000880 855 PFIRWAISNQ---KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN 930 (1239)
Q Consensus 855 ~iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg 930 (1239)
|+||+++++. ..|+|+||+|+|||+++++.+ .+||+|+|+|+||.++..+|+|+|.++.++|+.+|+++ ++|+||
T Consensus 82 ~iaR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~ref~Q~g~eiig~~~~~~d~E~i~l~~e~l~~lg~~~-~~i~i~ 160 (397)
T TIGR00442 82 PVARAVIENKLLLPKPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEIIALAAEILKELGIKD-FTLEIN 160 (397)
T ss_pred HHHHHHHhcccccCCCeEEEEEcCeecCCCCCCCcccceEEcCeeeeCCCCHHHHHHHHHHHHHHHHHcCCCc-eEEEec
Confidence 9999998863 359999999999999877654 45799999999999999999999999999999999975 999999
Q ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHh-hcCCCCCcccccchHHHHHHHHHHh-cCCCHHHHHHHHHHHHHhcCChhhH
Q 000880 931 HGDLLEAIWSWAGIKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQE-LNLAEAVVNRLQTVGLRFCGAADQA 1008 (1239)
Q Consensus 931 ~~~i~~~ll~~lgl~~~~~~~l~~~l~~-~d~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~~~~~l~~l~~~~~g~~~~~ 1008 (1239)
|+++++++++ .+..+.++|++ +|++. .+.+. +++.. .++.++..+.+..++. . . ..+
T Consensus 161 ~~~i~~~~~~-------~~~~l~~~l~~~~~~~~---------~~~~~-~l~~~~~~~~~~~~~~~~~~~~-~--~-~~~ 219 (397)
T TIGR00442 161 SLGILEGRLE-------YREALLRYLDKHLDKLG---------EDSVR-RLEKNPLRILDSKNEKIQELLK-E--A-PKI 219 (397)
T ss_pred CcccHHHHHH-------HHHHHHHHHHHhHhhcC---------HHHHH-HHhhccccCchhhhHHHHHHHh-c--C-HHH
Confidence 9999999987 46788888888 56432 22222 23332 4566666666766652 1 1 122
Q ss_pred HHHHhccCCCChhHHHHHHHH--HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccch
Q 000880 1009 LPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1086 (1239)
Q Consensus 1009 l~~l~~~~~~~~~~~~~l~~l--~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L 1086 (1239)
+..+ .....+.|+++ .++.+|+ .+.|||+++|+++||||+||++|..+.+. ..+||+|||||+|
T Consensus 220 ~~~~------~~~~~~~l~~l~~~l~~~~~--~i~~dl~~~r~~~YYtG~vFe~~~~~~~~------~~~i~~GGRYD~L 285 (397)
T TIGR00442 220 LDFL------DEESRAHFEELKELLDALGI--PYKIDPSLVRGLDYYTGTVFEFVTDELGA------QGTICGGGRYDGL 285 (397)
T ss_pred HHHh------hHHHHHHHHHHHHHHHHcCC--CEEECCccccCchhhcceEEEEEECCCCc------cceeeeccchHHH
Confidence 2211 23455556655 6777787 39999999999999999999999876441 1369999999999
Q ss_pred hhhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHHcCCeEEE
Q 000880 1087 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1166 (1239)
Q Consensus 1087 ~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G~~ve~ 1166 (1239)
+++||+. +.||||||+++|||+.++.......+...+.+|+|++.+ ++...+++++++.||+.|++|++
T Consensus 286 ~~~f~~~----------~~~avGfs~~~~~l~~~l~~~~~~~~~~~~~~vlV~~~~-~~~~~~~~~i~~~Lr~~gi~v~~ 354 (397)
T TIGR00442 286 VEELGGP----------PTPAVGFAIGIERLLLLLEELGLEPPEESSPDVYVVPLG-EEAELEALKLAQKLRKAGIRVEV 354 (397)
T ss_pred HHHhCCC----------CCceEEeeecHHHHHHHHHhcCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHhCCCeEEE
Confidence 9999653 369999999999999888633222222356789999875 66788999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCC
Q 000880 1167 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1210 (1239)
Q Consensus 1167 ~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~ 1210 (1239)
.+. .+++++++++|++.|++++|++|++|.+.++|+|||+.+|
T Consensus 355 ~~~-~~~l~k~~~~a~~~g~~~~i~ig~~e~~~~~v~vrnl~~~ 397 (397)
T TIGR00442 355 DLG-GRKLKKQLKYADKLGARFAVILGEDELANGTVTLKDLETG 397 (397)
T ss_pred eCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEeCCCC
Confidence 777 5789999999999999999999999999999999999875
No 11
>PRK00037 hisS histidyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=7.7e-56 Score=530.49 Aligned_cols=381 Identities=19% Similarity=0.285 Sum_probs=300.1
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-Cccc---cccEEEEeccCCCeeeecCCCc
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQF---KRNTVKLLTHGGDLLELSHELR 853 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~---~~~~~~~~D~~G~~l~LRPD~T 853 (1239)
..|+|++|++|.++..++.+++.++++|++|||++|.||+| ++... ++.. .++||+|.|++|+.++||||+|
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~i~~~~~~~Gy~ei~tP~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpd~T 84 (412)
T PRK00037 5 QAPRGTRDILPEESAKWQYVEDTIREVFERYGFSEIRTPIFEYTELFKRKVGEETDIVEKEMYTFQDKGGRSLTLRPEGT 84 (412)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeEeeccccchHHHhccccCcccccccceeEEEEcCCCCEEEecCCCc
Confidence 46899999999999999999999999999999999999999 33333 3333 6899999999999999999999
Q ss_pred HHHHHHHHhCCCCceeEEeecCeEEcCCCCCCC-CceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEECc-
Q 000880 854 LPFIRWAISNQKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH- 931 (1239)
Q Consensus 854 ~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~- 931 (1239)
+|+||+++++...|+|+||+|+|||+++++.++ +||+|+|+|+||.+++.+|+|+|.++.++|+.||+.+ +.+.|||
T Consensus 85 ~~~ar~~~~~~~~p~r~~~~g~vfR~e~~~~gr~ref~Q~g~ei~g~~~~~~d~E~i~~~~~~l~~lg~~~-~~~~l~~~ 163 (412)
T PRK00037 85 APVVRAVIEHKLQPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEVIALAADILKALGLKG-LKLLINSL 163 (412)
T ss_pred HHHHHHHHhCCCCCeEEEEEcCccccCCCCCCcccceEEcCeeeeCCCCcchhHHHHHHHHHHHHHcCCCc-eeeeeccC
Confidence 999999998766899999999999998776544 5799999999999999999999999999999999985 8886555
Q ss_pred ---------HHHHHHHHHHcCCCH---HHHHHHH-HHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 000880 932 ---------GDLLEAIWSWAGIKA---EHREKVA-ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 998 (1239)
Q Consensus 932 ---------~~i~~~ll~~lgl~~---~~~~~l~-~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~ 998 (1239)
+++++++++. ++++ ..++.+. .++...+ ..+ .
T Consensus 164 ~~~~~~~~~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~----------------------~~~--~---------- 208 (412)
T PRK00037 164 GDFEIRANYRKALVGFLEK-GLDELDEDSKRRLETNPLRILD----------------------KKD--K---------- 208 (412)
T ss_pred CCHHHhHHHHHHHHHHHHh-CchhhchHHHHHHhhCchhhhc----------------------ccc--h----------
Confidence 4455555554 3332 0000000 0000000 000 0
Q ss_pred HHhcCChhhHHHHHhccC-CCChhHHHHHHHH--HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccc
Q 000880 999 LRFCGAADQALPRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1075 (1239)
Q Consensus 999 ~~~~g~~~~~l~~l~~~~-~~~~~~~~~l~~l--~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~ 1075 (1239)
+. ...++.+..+. ..+.....++++| .++.+++ ++.|||+++||++||||+|||+|..+.+. .+
T Consensus 209 ----~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~i~~Dl~~~r~l~YYtG~vFe~~~~~~g~------~~ 275 (412)
T PRK00037 209 ----ED-QELLKDAPKLLDYLDEESKEHFEELKELLDALGI--PYVIDPRLVRGLDYYTGTVFEFVTDDLGA------QG 275 (412)
T ss_pred ----hh-HHHHhcchHHHHHhhHHHHHHHHHHHHHHHHcCC--CEEECCCcccChhhccceEEEEEECCCCc------cc
Confidence 00 00111100000 0123455566666 6677777 59999999999999999999999865432 24
Q ss_pred cccccccccchhhhccccccccccCCCCCCceeeeeccHHHHHhhCCCCCcCCCCCCCceEEEEecCCCccHHHHHHHHH
Q 000880 1076 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVA 1155 (1239)
Q Consensus 1076 ~i~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~ 1155 (1239)
+||+|||||+|+++||+. ++||||||+++|||+.++..... .+.+|+|++.+ ++...+|+++++
T Consensus 276 ~i~~GGRYD~L~~~f~~~----------~~pavGfs~~le~l~~~l~~~~~-----~~~~vlI~~~~-~~~~~~a~~i~~ 339 (412)
T PRK00037 276 TVCGGGRYDGLVEQFGGP----------PTPAVGFAIGVERLLLLLEELGE-----EPVDVYVVPLG-EDAELAALKLAE 339 (412)
T ss_pred eeeeccchhHHHHHhCCC----------CCceEEEEEcHHHHHHHHHhcCC-----CCCCEEEEEeC-hHHHHHHHHHHH
Confidence 799999999999998642 46999999999999988753321 46789999975 556788999999
Q ss_pred HHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHH
Q 000880 1156 ELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1228 (1239)
Q Consensus 1156 ~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l 1228 (1239)
.||+.|++|++... .+++++++++|++.|++++|++|++|.++|+|+|||+.+|++..+++++++++|++.+
T Consensus 340 ~Lr~~Gi~v~i~~~-~~~~~~~~~~a~~~gi~~~viig~~e~~~~~v~vr~~~~~~~~~v~~~el~~~i~~~~ 411 (412)
T PRK00037 340 KLRAAGIRVELDYG-GRKLKKQFKYADKSGARFVLILGEDELANGTVTVKDLRTGEQQTVPLDELVEALKELL 411 (412)
T ss_pred HHHHCCCeEEEeCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEECCCCceEEeeHHHHHHHHHHhh
Confidence 99999999998665 5689999999999999999999999999999999999999999999999999998764
No 12
>TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit. Apparant second copies of histidyl-tRNA synthetase, found in Bacillus subtilis, Synechocystis sp., Aquifex aeolicus, and others, are in fact a regulatory subunit of ATP phosphoribosyltransferase, and usually encoded by a gene adjacent to that encoding the catalytic subunit.
Probab=100.00 E-value=3.2e-52 Score=479.54 Aligned_cols=300 Identities=23% Similarity=0.333 Sum_probs=262.6
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCCCccccccEEEEeccCCCeeeecCCCcHHHHHHHHhC
Q 000880 788 IQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN 863 (1239)
Q Consensus 788 ~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~iaR~~~~~ 863 (1239)
+|++|.++..++.+++.++++|++|||++|.||+| .+...+....++||+|.|++|+.++||||+|+|+||+++++
T Consensus 1 ~D~~p~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~le~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~T~~iaR~~~~~ 80 (314)
T TIGR00443 1 RDLLPEEAARKEEIERQLQDVFRSWGYQEIITPTLEYLDTLSAGGGILNEDLFKLFDSLGRVLGLRPDMTTPIARAVSTR 80 (314)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCcchhhHHHhcccCCcchhceEEEECCCCCEEeecCcCcHHHHHHHHHh
Confidence 58999999999999999999999999999999999 34444336789999999999999999999999999998874
Q ss_pred ---CCCceeEEeecCeEEcCCCCCC-CCceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHHH
Q 000880 864 ---QKSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIW 939 (1239)
Q Consensus 864 ---~~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i~~~ll 939 (1239)
...|+|+||+|+|||+++++.+ .+||+|+|+|+||.++..+|+|||.++.++|+.+|+++ +.|.|||++++++++
T Consensus 81 ~~~~~~p~r~~y~g~VfR~~~~~~gr~re~~Q~g~Eiig~~~~~adaEvi~l~~~~l~~lg~~~-~~i~l~~~~il~~il 159 (314)
T TIGR00443 81 LRDRPLPLRLCYAGNVFRTNESGAGRSREFTQAGVELIGAGGPAADAEVIALLIEALKALGLKD-FKIELGHVGLVRALL 159 (314)
T ss_pred cccCCCCeEEEEeceEeecCCCcCCCcccccccceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCcHHHHHHHH
Confidence 2469999999999999887755 45799999999999999999999999999999999985 999999999999999
Q ss_pred HHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHHhccCCCC
Q 000880 940 SWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD 1019 (1239)
Q Consensus 940 ~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~ 1019 (1239)
+.+++++++++.++++++++++. .. .+++.+.+++++.++.+..++ .+.|++.+++++++.+. .+
T Consensus 160 ~~~~~~~~~~~~l~~~l~~~~~~---------~~----~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~~l~~l~~~~-~~ 224 (314)
T TIGR00443 160 EEAGLPEEAREALREALARKDLV---------AL----EELLAELGLDPEVRERLLALP-RLRGDGEEVLEEARALA-GS 224 (314)
T ss_pred HHcCCCHHHHHHHHHHHHhcCHH---------HH----HHHHHhcCCCHHHHHHHHHHH-HhcCChHHHHHHHHHhc-cC
Confidence 99999999999999999998832 11 344556788999999999998 67888788999988844 46
Q ss_pred hhHHHHHHHH-----HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccchhhhccccc
Q 000880 1020 KPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDRE 1094 (1239)
Q Consensus 1020 ~~~~~~l~~l-----~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~~~fg~~~ 1094 (1239)
+.+.+++++| .++.+|+..++.||++++|+++||||+||++|..+.+. +||+|||||+|+++||.
T Consensus 225 ~~~~~~l~~l~~~~~~l~~~~~~~~i~~D~~~~r~~~YYtGivFe~~~~~~~~--------~i~~GGRYD~L~~~fg~-- 294 (314)
T TIGR00443 225 ETAEAALDELEAVLELLEARGVEEYISLDLGLVRGYHYYTGLIFEGYAPGLGA--------PIAGGGRYDNLLGRFGR-- 294 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEecccccCCCCccceEEEEEECCCCC--------cccCCccHHHHHHHcCC--
Confidence 6667777777 77888887779999999999999999999999976544 69999999999988853
Q ss_pred cccccCCCCCCceeeeeccHHHHHhhCC
Q 000880 1095 YVGYASRTNPPSGVGASLALETIIQHYP 1122 (1239)
Q Consensus 1095 ~~~~~g~~~~~pAvGfaigldrl~~~L~ 1122 (1239)
++||||||+++|||+.++.
T Consensus 295 ---------~~~AvGfa~~~d~l~~~l~ 313 (314)
T TIGR00443 295 ---------PLPATGFALNLERLLEALT 313 (314)
T ss_pred ---------CCCCceEEecHHHHHHHhc
Confidence 4699999999999987753
No 13
>PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=1.7e-51 Score=478.96 Aligned_cols=305 Identities=20% Similarity=0.270 Sum_probs=253.5
Q ss_pred hHHHHHHHHHHHHHHHcCCccccccce----eccCC-CccccccEEEEeccCCCeeeecCCCcHHHHHHHHhC-CCCcee
Q 000880 796 ELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN-QKSSFK 869 (1239)
Q Consensus 796 ~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~~~~~~D~~G~~l~LRPD~T~~iaR~~~~~-~~~P~r 869 (1239)
...+++++.++++|++|||++|.||+| ++..+ ++...++||+|.|++|+.++||||+|+||||+++++ ...|.|
T Consensus 5 ~~~~~i~~~i~~~f~~~Gy~~I~tP~lE~~e~~~~~~g~~~~~~~~~f~D~~G~~l~LRpD~T~piaR~~~~~~~~~p~R 84 (373)
T PRK12295 5 SASAAAAEALLASFEAAGAVRVDPPILQPAEPFLDLSGEDIRRRIFVTSDENGEELCLRPDFTIPVCRRHIATAGGEPAR 84 (373)
T ss_pred hhHHHHHHHHHHHHHHcCCEEeeCCccccHHHhhhccCchhhcceEEEECCCCCEEeeCCCCcHHHHHHHHHcCCCCCeE
Confidence 345689999999999999999999999 33344 777789999999999999999999999999988774 456999
Q ss_pred EEeecCeEEcCCCCCCCCceeEEeEEEeCCC-CcccHHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHHHHHcCCCHHH
Q 000880 870 RYEISSVYRRAIGHSPPNRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEH 948 (1239)
Q Consensus 870 ~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~-s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i~~~ll~~lgl~~~~ 948 (1239)
+||+|+|||++ .++.+||+|+|+|+||.. ++.+|+|||.+++++|+.+|+.+ ++|+|||+++++++++.+++++++
T Consensus 85 ~~Y~g~VfR~~--~gr~rEf~Q~GvEiiG~~~~~~aDaEvi~l~~~~L~~lgl~~-~~i~ig~~~il~~ll~~l~l~~~~ 161 (373)
T PRK12295 85 YAYLGEVFRQR--RDRASEFLQAGIESFGRADPAAADAEVLALALEALAALGPGD-LEVRLGDVGLFAALVDALGLPPGW 161 (373)
T ss_pred EEEEccEEECC--CCCCCcceEeeEEeeCCCCCccchHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHHHHHcCCCHHH
Confidence 99999999998 556778999999999975 57999999999999999999986 999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCC--Cc---------------------------------------ccccchHHHHHHHHHHhc---
Q 000880 949 REKVAELLAMMGSLRP--QS---------------------------------------SEWKSKWVVIRRQLLQEL--- 984 (1239)
Q Consensus 949 ~~~l~~~l~~~d~~~~--~~---------------------------------------~~~~~~~~~~~~~l~~~~--- 984 (1239)
+++++.+|+++++.+. .. ...+..+.++.+++....
T Consensus 162 ~~~l~~~i~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~r~~~ei~~~l~~~~~~~ 241 (373)
T PRK12295 162 KRRLLRHFGRPRSLDALLARLAGPRVDPLDEHAGVLAALADEAAARALVEDLMSIAGISPVGGRSPAEIARRLLEKAALA 241 (373)
T ss_pred HHHHHHHHhccchHHHHHHhhcccccccccchhhhhhhhccchhhhhhhhhhhhhccccccccccHHHHHHHHHhhhccc
Confidence 9999999999886310 00 000112333333333321
Q ss_pred ---CCCHHHHHHHHHHHHHhcCChhhHHHHHhccCCCCh-hHHHHHHHH-----HHHHccCc-ccEEEccCCCCCCCccc
Q 000880 985 ---NLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADK-PTRKALDEL-----YLRIWRIE-KNIYIDALMPPIESYHR 1054 (1239)
Q Consensus 985 ---~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~-~~~~~l~~l-----~l~~~~~~-~~i~~Dl~~~rgl~YYt 1054 (1239)
+++.+.++.+..++ .+.|+.++++++++.+...++ .+.+++++| .++.+|+. +++.||++++||++|||
T Consensus 242 ~~~~~~~~~~~~l~~l~-~~~g~~~~~~~~l~~l~~~~~~~~~~al~~L~~l~~~l~~~g~~~~~v~~D~~~vrgl~YYT 320 (373)
T PRK12295 242 AAARLPAEALAVLERFL-AISGPPDAALAALRALAADAGLDLDAALDRFEARLAALAARGIDLERLRFSASFGRPLDYYT 320 (373)
T ss_pred ccCCCCHHHHHHHHHHH-HccCCHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHcCCCcceEEEecccccCCcccc
Confidence 78889999999998 688888889999998766556 677788777 77888886 67999999999999999
Q ss_pred eeEEEEEecCCCCcccccccccccccccccchhhhccccccccccCCCCCCceeeeeccHHHHHhh
Q 000880 1055 NLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQH 1120 (1239)
Q Consensus 1055 G~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~ 1120 (1239)
|+|||+|+.+.+ ..+||+|||||+|++.||+ +.++||||||+++|||+.+
T Consensus 321 GiVFe~~~~~~~-------~~~I~~GGRYD~Li~~fg~---------~~~~pAvGfai~~drl~~~ 370 (373)
T PRK12295 321 GFVFEIRAAGNG-------DPPLAGGGRYDGLLTRLGA---------GEPIPAVGFSIWLDRLAAL 370 (373)
T ss_pred ceEEEEEECCCC-------CCcccCCcCHHHHHHHhCC---------CCCCCeeEEEEcHHHHHhh
Confidence 999999987642 1369999999999988863 2357999999999999764
No 14
>PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A ....
Probab=100.00 E-value=2.6e-50 Score=465.13 Aligned_cols=297 Identities=25% Similarity=0.385 Sum_probs=244.5
Q ss_pred cccccchhhhhHHHHHHHHHHHHHHHcCCccccccceec----cCCCccccccEEEEeccCCCeeeecCCCcHHHHHHHH
Q 000880 786 SSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL----LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAI 861 (1239)
Q Consensus 786 G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~~~----~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~iaR~~~ 861 (1239)
|++|++|.+++.++++++.++++|++|||++|.||+|+. ........+++|+|.|++|+.++||||+|+|+||+++
T Consensus 1 G~~d~~~~~~~~~~~i~~~l~~~f~~~Gy~~i~~P~le~~~~~~~~~~~~~~~~~~~~D~~G~~l~LR~D~T~~iaR~~a 80 (311)
T PF13393_consen 1 GFRDLLPEEARKRERIESKLREVFERHGYEEIETPLLEYYELFLDKSGEDSDNMYRFLDRSGRVLALRPDLTVPIARYVA 80 (311)
T ss_dssp T---B-HHHHHHHHHHHHHHHHHHHHTT-EE-B--SEEEHHHHHCHSSTTGGCSEEEECTTSSEEEE-SSSHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEEECCeEeecHHhhhccccchhhhEEEEecCCcEeccCCCCcHHHHHHHH
Confidence 899999999999999999999999999999999999932 2333333559999999999999999999999999999
Q ss_pred hCC--CCceeEEeecCeEEcCCCCCC-CCceeEEeEEEeCCCCcccHHHHHHHHHHHHH-hcCCCCceEEEECcHHHHHH
Q 000880 862 SNQ--KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVT-RFFHAESCDIHLNHGDLLEA 937 (1239)
Q Consensus 862 ~~~--~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~-~lgi~~~~~i~lg~~~i~~~ 937 (1239)
++. ..|.|+||+|+|||+++++.+ .+||+|+|+|+||.+++.+|+|+|.++.++|+ .+|+.+ +.|+|||++++++
T Consensus 81 ~~~~~~~~~r~~y~g~vfR~~~~~~g~~re~~Q~g~Eiig~~~~~~daEvi~l~~e~l~~~l~~~~-~~i~i~h~~i~~~ 159 (311)
T PF13393_consen 81 RNLNLPRPKRYYYIGPVFRYERPGKGRPREFYQCGFEIIGSSSLEADAEVIKLADEILDRELGLEN-FTIRINHTGILDA 159 (311)
T ss_dssp HCCGSSSSEEEEEEEEEEEEETTTTTBESEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS-EEEEEEEHHHHHH
T ss_pred HhcCcCCCceEEEEcceeeccccCCCCCceeEEEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCC-cEEEEcCchhhHH
Confidence 974 569999999999999877654 45799999999999999999999999999997 999976 9999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 000880 938 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 1017 (1239)
Q Consensus 938 ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 1017 (1239)
+++.+|++++.++.++.++.+++. .++ ++++.+.+++.+.++.+..++ .+.|+.+.+.+.+.. +.
T Consensus 160 il~~~gl~~~~~~~l~~~l~~~~~------------~~~-~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~l~~~~~~-~~ 224 (311)
T PF13393_consen 160 ILEHLGLPEDLRRELLEALDKKDL------------SEL-KELLSELGLSSESLEILDKLP-ELEGDPEALEELLES-LP 224 (311)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHTHH------------HHH-HHHHHHTTTTHHHHHHHHHHH-HHHHSHHHHHHHHHH-HT
T ss_pred HHhhcCCChhhhhhhhhheecccc------------ccc-hhhhcccccchhhhhhhhccc-cccchHHHHHHHHHH-Hh
Confidence 999999999999999999998762 233 356666889999999999988 567776555554444 44
Q ss_pred CChhHHHHHHHH-----HHHHcc-CcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccchhhhcc
Q 000880 1018 ADKPTRKALDEL-----YLRIWR-IEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1091 (1239)
Q Consensus 1018 ~~~~~~~~l~~l-----~l~~~~-~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~~~fg 1091 (1239)
.++.+.+++++| .++.+| ...+|.||++++|+++||||+||++|..+.+. +||+|||||+|++.||
T Consensus 225 ~~~~~~~~~~~L~~l~~~l~~~~~~~~~i~~D~~~~r~~~YYtG~vFe~~~~~~~~--------~ia~GGRYD~L~~~fg 296 (311)
T PF13393_consen 225 SSPALQEALEELEELLKLLEALGYPSIKIIFDLSLVRGLDYYTGIVFEVYAPGRGS--------PIAGGGRYDNLLEQFG 296 (311)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHCTHTTTTEEEETT-GTSSTTEESEEEEEEETTSSS--------ESEEEEEETTHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcccCceEEEChhhccchhhcCCEEEEEEEcCCCc--------eEecccChhHHHHHhC
Confidence 455555666666 778888 56789999999999999999999999987554 6999999999999885
Q ss_pred ccccccccCCCCCCceeeeeccHHHH
Q 000880 1092 DREYVGYASRTNPPSGVGASLALETI 1117 (1239)
Q Consensus 1092 ~~~~~~~~g~~~~~pAvGfaigldrl 1117 (1239)
. ++|||||||++|||
T Consensus 297 ~-----------~~~AvGfai~ld~L 311 (311)
T PF13393_consen 297 K-----------PIPAVGFAIGLDRL 311 (311)
T ss_dssp S-----------S-EEEEEEEEHHHH
T ss_pred C-----------CCceEEEEEEeccC
Confidence 3 46999999999997
No 15
>PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=3.4e-48 Score=435.69 Aligned_cols=268 Identities=18% Similarity=0.227 Sum_probs=216.8
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccceeccCC-CccccccEEEEeccCCCeeeecCCCcHHHHHHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWA 860 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~~~~~~D~~G~~l~LRPD~T~~iaR~~ 860 (1239)
..|+|++|++|.++..++++++.++++|++|||++|.||+|++... .....++||+|.|++|+.++||||+|+||||++
T Consensus 6 ~~p~G~rD~lp~e~~~~~~i~~~l~~vf~~~Gy~~I~tP~lE~~e~~~~~~~~~~y~~~D~~g~~l~LRpD~T~~iaR~~ 85 (281)
T PRK12293 6 EIPQGSKLYFGKSAKLKREIENVASEILYENGFEEIVTPFFSYHQHQSIADEKELIRFSDEKNHQISLRADSTLDVVRIV 85 (281)
T ss_pred CCCCcccccCcHHHHHHHHHHHHHHHHHHHcCCeEeeccceeehhhhcccchhceEEEECCCCCEEEECCcCCHHHHHHH
Confidence 4689999999999999999999999999999999999999965544 445789999999999999999999999999999
Q ss_pred HhCC---CCceeEEeecCeEEcCCCCCCCCceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEECcHHHHHH
Q 000880 861 ISNQ---KSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEA 937 (1239)
Q Consensus 861 ~~~~---~~P~r~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i~~~ 937 (1239)
+++. ..|+|+||+|+|||+++ +||+|+|+|+||..++ +|||.+|.++|+++|++ +.|+|||++++++
T Consensus 86 a~~~~~~~~p~r~~Y~g~vfR~~~-----rEf~Q~GvEliG~~~~---~Evi~la~~~l~~lgl~--~~i~ig~~~i~~~ 155 (281)
T PRK12293 86 TKRLGRSTEHKKWFYIQPVFRYPS-----NEIYQIGAELIGEEDL---SEILNIAAEIFEELELE--PILQISNIKIPKL 155 (281)
T ss_pred HHhcccCCCceeEEEeccEEecCC-----CcccccCeEeeCCCCH---HHHHHHHHHHHHHcCCC--CEEEECCHHHHHH
Confidence 8853 35999999999999863 7999999999999986 69999999999999995 6799999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 000880 938 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 1017 (1239)
Q Consensus 938 ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 1017 (1239)
+++.++++++..+.. .++ ++.. +.++.+..++ .+.+. + .++++...
T Consensus 156 ~l~~~~~~~~~~~~~--~~~---------------------~~~~------~~~~~l~~l~-~~~~~-~-~~~~~~~~-- 201 (281)
T PRK12293 156 VAEILGLDIEVFKKG--QIE---------------------KLLA------QNVPWLNKLV-RIKTL-E-DLDEVIEL-- 201 (281)
T ss_pred HHHHcCCCHHHHhHH--HHH---------------------HHHH------HhHHHHHHHH-hcCCH-H-HHHHHHhh--
Confidence 999999987654221 001 1111 1223344444 23332 2 23333331
Q ss_pred CChhHHHHHHHH--HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccchhhhcccccc
Q 000880 1018 ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREY 1095 (1239)
Q Consensus 1018 ~~~~~~~~l~~l--~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~~~fg~~~~ 1095 (1239)
.+....+++++| .++.+++. .+.|||+++||++||||+|||+|.++ . +||+|||||+.
T Consensus 202 ~~~~~~~~l~~l~~~l~~l~~~-~~~~Dl~~vrgl~YYTGivFe~~~~~--~--------~i~~GGRYD~~--------- 261 (281)
T PRK12293 202 VPDEIKEELEKLKELAESIKYE-NLVIAPLYYAKMRYYDDLFFRFFDGN--S--------TLASGGNYEID--------- 261 (281)
T ss_pred CCHHHHHHHHHHHHHHHHcCCC-cEEEccccccCCCCccceEEEEEECC--c--------eeccccCCCCC---------
Confidence 235677888888 77777764 49999999999999999999999863 1 59999999931
Q ss_pred ccccCCCCCCceeeeeccHHHHHhhC
Q 000880 1096 VGYASRTNPPSGVGASLALETIIQHY 1121 (1239)
Q Consensus 1096 ~~~~g~~~~~pAvGfaigldrl~~~L 1121 (1239)
++||||||+|+|||+.+|
T Consensus 262 --------~~PAvGfa~~ld~l~~~l 279 (281)
T PRK12293 262 --------GISSSGFALYTDNLIEIL 279 (281)
T ss_pred --------CCCcceEEeeHHHHHHHh
Confidence 369999999999998775
No 16
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-48 Score=428.39 Aligned_cols=260 Identities=28% Similarity=0.404 Sum_probs=217.8
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCc-----hhHHHHHHHHHHHHhcCCCceeeeeeeeeecC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETG 496 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-----~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~ 496 (1239)
+.+.|.+.+.||+|+||.|.+|..+.||+.||||+|+...... .....+.+|+++|++|+|||||++++.|..
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~-- 247 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV-- 247 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec--
Confidence 4567888999999999999999999999999999998654221 122346799999999999999999998843
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL 575 (1239)
..+.||||||++ |.|.+.+...+.+.+...+.+++|++.|+
T Consensus 248 --------------------------------------~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~av 289 (475)
T KOG0615|consen 248 --------------------------------------PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAV 289 (475)
T ss_pred --------------------------------------CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHH
Confidence 356799999995 69999999999999999999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 652 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 652 (1239)
.|||++||+||||||+|||+..+ ..+||+|||+|+...... .+.+.||||.|.|||++.+.
T Consensus 290 kYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s----------------fm~TlCGTpsYvAPEVl~~k 353 (475)
T KOG0615|consen 290 KYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS----------------FMKTLCGTPSYVAPEVLASK 353 (475)
T ss_pred HHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccce----------------ehhhhcCCccccChhheecC
Confidence 99999999999999999999876 789999999999864221 24678999999999999864
Q ss_pred C--CCCcchhhHHHHHHHHHhhc---CCchhHHHH-HHHHhhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 000880 653 P--KIDEKADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 725 (1239)
Q Consensus 653 ~--~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~-~~~~~~~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 725 (1239)
+ .+..++||||+||+||-+++ ||.+..... ...++...... .|+.|..++.++.+||++||..||++|||+.+
T Consensus 354 g~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~e 433 (475)
T KOG0615|consen 354 GVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADE 433 (475)
T ss_pred CeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHH
Confidence 3 25569999999999999997 776554433 22333333332 46789999999999999999999999999999
Q ss_pred HHhccCCCCchH
Q 000880 726 LLQDALPPQMEY 737 (1239)
Q Consensus 726 iL~~~~~~~~~~ 737 (1239)
+|+||||+-.+.
T Consensus 434 aL~hpW~~~~~~ 445 (475)
T KOG0615|consen 434 ALNHPWFKDAPC 445 (475)
T ss_pred HhcChhhhcccc
Confidence 999999986653
No 17
>COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-47 Score=433.47 Aligned_cols=368 Identities=20% Similarity=0.209 Sum_probs=289.6
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-CccccccEEEEeccCCCeeeecCCCcHHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 856 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~~~~~~D~~G~~l~LRPD~T~~i 856 (1239)
..|.|++|.+|.++..++.|++++.+.|.+|||+.|+||++ .+... ++..++++|+|+|+.|+.+|||||||+||
T Consensus 4 ~lp~g~rd~Lp~e~~~~~~i~~~l~~~f~~~Gy~~v~tP~lE~~d~~l~~~g~~l~~~~f~l~d~~g~~l~LRpD~T~pV 83 (390)
T COG3705 4 QLPEGIRDVLPLEARRKEEIRDQLLALFRAWGYERVETPTLEPADPLLDGAGEDLRRRLFKLEDETGGRLGLRPDFTIPV 83 (390)
T ss_pred cCCCcchhcchhHHhhHHHHHHHHHHHHHHhCCccccccccchhhhhhhccchhhhhhheEEecCCCCeEEecccccHHH
Confidence 46899999999999999999999999999999999999999 33333 67789999999999999999999999999
Q ss_pred HHHHHhCCC-CceeEEeecCeEEcCCCCCCCC-ceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEECcHHH
Q 000880 857 IRWAISNQK-SSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDL 934 (1239)
Q Consensus 857 aR~~~~~~~-~P~r~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i 934 (1239)
||.+++... .|.|+||.|+|||..+...++. ||+|+|||+||.++..||+|||.+++.+|+++|+.+ ++|.|||.+|
T Consensus 84 aR~~~~~~~~~P~Rl~Y~G~Vfr~~~~~~g~~~Ef~QaGiEllG~~~~~ADaEvi~la~~~L~~~gl~~-~~l~LG~~gi 162 (390)
T COG3705 84 ARIHATLLAGTPLRLSYAGKVFRAREGRHGRRAEFLQAGIELLGDDSAAADAEVIALALAALKALGLAD-LKLELGHAGI 162 (390)
T ss_pred HHHHHHhcCCCCceeeecchhhhcchhccCcccchhhhhhHHhCCCcchhhHHHHHHHHHHHHHcCCcC-eEEEeccHHH
Confidence 999988554 5999999999999865555665 999999999999999999999999999999999986 9999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHHhc
Q 000880 935 LEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 1014 (1239)
Q Consensus 935 ~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~ 1014 (1239)
+++++..+++++.|+++|+++|.+++... + .++....+++++....+..++ .+.|. .+++.+++.
T Consensus 163 f~all~~~~l~~~~~~~L~~a~~~k~~~~------------~-~~~~~~~~~~~~~~~~l~~l~-~l~gg-~e~l~~~~~ 227 (390)
T COG3705 163 FRALLAAAGLPGGWRARLRRAFGDKDLLG------------L-ELLVLAAPLSPELRGRLSELL-ALLGG-REVLERARG 227 (390)
T ss_pred HHHHHHHcCCChhHHHHHHHHHhccchhh------------H-HHHhhccCCChhhhHHHHHHH-HHhCC-HHHHHHHHH
Confidence 99999999999999999999999998432 1 333334577778888888888 45555 356666666
Q ss_pred cCCCChhHHHHHHHH---HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccchhhhcc
Q 000880 1015 ALPADKPTRKALDEL---YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1091 (1239)
Q Consensus 1015 ~~~~~~~~~~~l~~l---~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~~~fg 1091 (1239)
.+........+++++ .....+...++.+|++++++++||||++|++|..+.+. ++++|||||+|.+.||
T Consensus 228 ~l~~~~~~~~al~~~~~l~di~~~~~e~i~lDLg~l~~~~YyTg~~F~ay~~~~~~--------al~~GGRYd~l~~~f~ 299 (390)
T COG3705 228 LLDELMAQGIALNEGRALADIARRLIEKIALDLGRLRHFDYYTGLVFLAYADGLGD--------ALASGGRYDGLLGLFG 299 (390)
T ss_pred hhhhhhhhhhhhhhhhhHHHHHhccchhheehhhcccccchhhceeeeeeeccccc--------hhhcccchhhhhhhcC
Confidence 554443334444444 11122233569999999999999999999999888776 6999999999988886
Q ss_pred ccccccccCCCCCCceeeeeccHHHHHhhCCCCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHHcCCeEEEeeCCC
Q 000880 1092 DREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPD 1171 (1239)
Q Consensus 1092 ~~~~~~~~g~~~~~pAvGfaigldrl~~~L~~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G~~ve~~~~~~ 1171 (1239)
.. .||+||++++++|... ..+. .....++.+.... +.....++++++++|..|-.+.....
T Consensus 300 ~~-----------~patGf~~~l~~l~~~----~~~~-~~~~~~~~f~~~~-~~~~~~~~e~~~~~r~~g~~~~~~l~-- 360 (390)
T COG3705 300 RA-----------APATGFALRLDALAQG----GLPL-EERRYAALFGREL-DYYTGAAFEAAQALRLAGGGRYDRLL-- 360 (390)
T ss_pred cc-----------ccchhhHhhHHHHHhc----CCCc-ccchhhhccCccc-hhhHHHHHHHHHHhcccCCeEEEecc--
Confidence 53 4999999999999852 1221 2234455555442 33458899999999977655543222
Q ss_pred CCHHHHHHHHHhCCCcEEEEEcCC
Q 000880 1172 PSLTEQYEYASEHDIKCLVILTDT 1195 (1239)
Q Consensus 1172 ~~l~k~~~~A~~~g~~~~viig~~ 1195 (1239)
..+ -..+...++.+.+.+...
T Consensus 361 ~g~---~~~~~~~~~~~~~~~~~~ 381 (390)
T COG3705 361 TGL---GASEEIPGVGFSLWLDRG 381 (390)
T ss_pred ccc---chHhhhcccceeEeeccc
Confidence 112 234445677777766444
No 18
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-47 Score=418.50 Aligned_cols=263 Identities=30% Similarity=0.450 Sum_probs=228.1
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
...++|+++++||+|+||+|+.++.+.+++.||+|+++++.... ........|..+|..++||+||+++..|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF------- 94 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF------- 94 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec-------
Confidence 34689999999999999999999999999999999998765432 3567789999999999999999999887
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
++...+|+|+||++ |.|..+|++.+.|++..++.|+.+|+.||.||
T Consensus 95 ---------------------------------Qt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~L 141 (357)
T KOG0598|consen 95 ---------------------------------QTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYL 141 (357)
T ss_pred ---------------------------------ccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHH
Confidence 34678999999996 59999999999999999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|++|||||||||+|||||.+||++|+|||+|+...... ....++|||+.|||||++.+ ..|+.+
T Consensus 142 H~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------~~t~tfcGT~eYmAPEil~~-~gy~~~ 205 (357)
T KOG0598|consen 142 HSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------DATRTFCGTPEYMAPEILLG-KGYDKA 205 (357)
T ss_pred HhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC---------------CccccccCCccccChHHHhc-CCCCcc
Confidence 99999999999999999999999999999998532111 12345899999999999998 579999
Q ss_pred hhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC----CHHHHHhccC
Q 000880 659 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDAL 731 (1239)
Q Consensus 659 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP----ta~eiL~~~~ 731 (1239)
+|||||||++|||++ ||..........+++..+...++. ..+++++++|+++|..||.+|. ++.+|-+|||
T Consensus 206 vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~--~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hpf 283 (357)
T KOG0598|consen 206 VDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG--YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPF 283 (357)
T ss_pred cchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc--cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcc
Confidence 999999999999997 888877777776666655344433 2456999999999999999995 6899999999
Q ss_pred CCCchHHHHH
Q 000880 732 PPQMEYELLD 741 (1239)
Q Consensus 732 ~~~~~~~~~~ 741 (1239)
|..+.|+.+.
T Consensus 284 F~~inW~~l~ 293 (357)
T KOG0598|consen 284 FKGINWEKLL 293 (357)
T ss_pred cccCCHHHHH
Confidence 9999987653
No 19
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-46 Score=436.11 Aligned_cols=251 Identities=31% Similarity=0.514 Sum_probs=224.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..|+..+.||+|||..||.+++..+|+.||+|++.++. ......+++.+||++.+.|+|||||+++++|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F---------- 87 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF---------- 87 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe----------
Confidence 67999999999999999999999999999999998654 2344567899999999999999999999998
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
++..++|||.|+|. ++|..++..++.++|.+|+.|++||+.||.|||++
T Consensus 88 ------------------------------EDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~ 137 (592)
T KOG0575|consen 88 ------------------------------EDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL 137 (592)
T ss_pred ------------------------------ecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 34678999999997 79999999999999999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
+|||||||..|+||+++.+|||+|||+|+.+..+. -...+.||||.|.|||++.. ..+++.+||
T Consensus 138 ~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~---------------Erk~TlCGTPNYIAPEVl~k-~gHsfEvDi 201 (592)
T KOG0575|consen 138 GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG---------------ERKKTLCGTPNYIAPEVLNK-SGHSFEVDI 201 (592)
T ss_pred CceecccchhheeecCcCcEEecccceeeeecCcc---------------cccceecCCCcccChhHhcc-CCCCCchhh
Confidence 99999999999999999999999999999876432 12356899999999999997 679999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
||+|||||-|+. ||....-.+...++......+|. ..+.++++||.+||++||.+|||+++||.|+||.
T Consensus 202 WSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~---~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 202 WSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS---HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred hhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc---ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 999999999996 88877677777776666666665 5567999999999999999999999999999994
No 20
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=415.68 Aligned_cols=258 Identities=29% Similarity=0.461 Sum_probs=220.4
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
+....+++.+..||+|..|+||+|+|+.|++.+|+|+|. -.......+++.+|+++++.++|||||.+||+|+..+
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~--- 150 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG--- 150 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC---
Confidence 355678899999999999999999999999999999995 3455667889999999999999999999999996531
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
. .++|+||||+ |+|.+++...+++++....+++.+|++||.||
T Consensus 151 -----------------------------------~-~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YL 194 (364)
T KOG0581|consen 151 -----------------------------------E-EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYL 194 (364)
T ss_pred -----------------------------------c-eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 5899999996 69999999999999999999999999999999
Q ss_pred Hh-CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 579 HG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 579 Hs-~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
|. ++||||||||+||||+..|.|||||||.++.+... ...+++||..|||||.+++ ..|+.
T Consensus 195 h~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-----------------~a~tfvGT~~YMsPERi~g-~~Ys~ 256 (364)
T KOG0581|consen 195 HEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-----------------IANTFVGTSAYMSPERISG-ESYSV 256 (364)
T ss_pred hhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-----------------hcccccccccccChhhhcC-CcCCc
Confidence 95 99999999999999999999999999999976432 1367899999999999999 68999
Q ss_pred chhhHHHHHHHHHhhc---CCchh-----HHHHHHHHhhhhcCCCCCccc-cCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 658 KADMYSLGIVFFELWH---PFSTA-----MERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~-----~~~~~~~~~~~~~~~~p~~~~-~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
++||||||++++||++ ||.+. ...+.+..+... ..|..+. ..++++++||..||.+||.+|||+.|+++
T Consensus 257 ~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~--ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 257 KSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE--PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC--CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 9999999999999996 66653 223333334332 2222222 37789999999999999999999999999
Q ss_pred ccCCCCchH
Q 000880 729 DALPPQMEY 737 (1239)
Q Consensus 729 ~~~~~~~~~ 737 (1239)
|||+.+...
T Consensus 335 Hpfi~~~~~ 343 (364)
T KOG0581|consen 335 HPFIKKFED 343 (364)
T ss_pred CHHHhhccc
Confidence 999887654
No 21
>cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain.
Probab=100.00 E-value=3.7e-45 Score=410.94 Aligned_cols=249 Identities=23% Similarity=0.345 Sum_probs=208.1
Q ss_pred hhhHHHHHHHHHHHHHHHcCCccccccce----eccCC-CccccccEEEEeccCCCeeeecCCCcHHHHHHHHhCCC---
Q 000880 794 DTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQK--- 865 (1239)
Q Consensus 794 ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~~~~~~D~~G~~l~LRPD~T~~iaR~~~~~~~--- 865 (1239)
++..++.+++.++++|++|||++|.||+| .+... ++...++||+|.|++|+.++||||+|+|+||+++++..
T Consensus 1 ~~~~~~~l~~~l~~~f~~~Gy~~v~tP~le~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpd~T~~iaR~~a~~~~~~~ 80 (261)
T cd00773 1 EAALRRYIEDTLREVFERYGYEEIDTPVFEYTELFLRKSGDEVSKEMYRFKDKGGRDLALRPDLTAPVARAVAENLLSLP 80 (261)
T ss_pred ChHHHHHHHHHHHHHHHHcCCEEeeccceeeHHHhcccccccccceEEEEECCCCCEEEeCCCCcHHHHHHHHhcCccCC
Confidence 36788999999999999999999999999 33333 56778999999999999999999999999999998654
Q ss_pred CceeEEeecCeEEcCCCCC-CCCceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHHHHHcCC
Q 000880 866 SSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGI 944 (1239)
Q Consensus 866 ~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i~~~ll~~lgl 944 (1239)
.|+|+||+|+|||++.++. +.+||+|+|+|+||.++..+|+|+|.++.++|+.+|+.+ +.|.|||+++++++++.+++
T Consensus 81 ~p~k~~y~g~vfR~e~~~~g~~re~~Q~g~Eiig~~~~~~daE~i~l~~~~l~~lg~~~-~~i~l~~~~i~~~l~~~~~~ 159 (261)
T cd00773 81 LPLKLYYIGPVFRYERPQKGRYREFYQVGVEIIGSDSPLADAEVIALAVEILEALGLKD-FQIKINHRGILDGIAGLLED 159 (261)
T ss_pred CCeEEEEEcCEEecCCCCCCCccceEEeceeeeCCCChHHHHHHHHHHHHHHHHcCCCc-eEEEECCHHHHHHHhhccCC
Confidence 6999999999999987664 556799999999999999999999999999999999986 99999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHH
Q 000880 945 KAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRK 1024 (1239)
Q Consensus 945 ~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~ 1024 (1239)
+++.+.++.+.+++ ...+
T Consensus 160 ~~~~~~~l~~~l~~--------------------------------------------------------------~~l~ 177 (261)
T cd00773 160 REEYIERLIDKLDK--------------------------------------------------------------EALA 177 (261)
T ss_pred CHHHHHHHHHHhhH--------------------------------------------------------------HHHH
Confidence 87665544322221 0111
Q ss_pred HHHHH--HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccchhhhccccccccccCCC
Q 000880 1025 ALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRT 1102 (1239)
Q Consensus 1025 ~l~~l--~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~~~fg~~~~~~~~g~~ 1102 (1239)
.|+.+ .++.+|+..++.||++++|+++||||+||++|.++.+. ..+||+|||||+|+++|++
T Consensus 178 ~l~~l~~~l~~~~~~~~i~~d~~~~r~~~YYtG~vF~~~~~~~~~------~~~i~~GGRYD~L~~~f~~---------- 241 (261)
T cd00773 178 HLEKLLDYLEALGVDIKYSIDLSLVRGLDYYTGIVFEAVADGLGA------QGSIAGGGRYDGLLEEFGG---------- 241 (261)
T ss_pred HHHHHHHHHHHcCCCceEEEcCccccCCcccCceEEEEEECCCCc------cCeEeeccCHHHHHHHhCC----------
Confidence 12222 45666776789999999999999999999999987521 2379999999999998733
Q ss_pred CCCceeeeeccHHHHHhhC
Q 000880 1103 NPPSGVGASLALETIIQHY 1121 (1239)
Q Consensus 1103 ~~~pAvGfaigldrl~~~L 1121 (1239)
.++|||||||++|||+.+|
T Consensus 242 ~~~~avGfa~~~d~l~~~~ 260 (261)
T cd00773 242 EDVPAVGFAIGLERLLLAL 260 (261)
T ss_pred CCCCeEEEEEcHHHHHHhh
Confidence 2469999999999998775
No 22
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=408.26 Aligned_cols=259 Identities=27% Similarity=0.481 Sum_probs=222.9
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
+...+|.+.+.||+|+||+||+|+++.++..||||.|.++.......+.+..|+.+|+.++|||||++++++..
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~------ 80 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED------ 80 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec------
Confidence 44689999999999999999999999999999999998776566677788999999999999999999999743
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
..++|+|||||. |+|.++++..+.+++..++.++.||+.||++||
T Consensus 81 ----------------------------------~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 81 ----------------------------------DDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred ----------------------------------CCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999996 799999999999999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCC------CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 000880 580 GQGIIHRDLTPNNIFFDAR------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 653 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 653 (1239)
+++||||||||+||||+.. -.+||+|||+|+.+.... ...+.||+|.|||||+++. .
T Consensus 127 ~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~----------------~a~tlcGSplYMAPEV~~~-~ 189 (429)
T KOG0595|consen 127 ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS----------------MAETLCGSPLYMAPEVIMS-Q 189 (429)
T ss_pred HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh----------------HHHHhhCCccccCHHHHHh-c
Confidence 9999999999999999875 458999999999875332 1245799999999999986 6
Q ss_pred CCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 000880 654 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 730 (1239)
Q Consensus 654 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 730 (1239)
.|+.|+|+||+|+|||+|++ ||......+....+.......|......++...+|+...+..+|.+|.++.+-+.|+
T Consensus 190 ~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 190 QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 89999999999999999996 887777776666544444444444444455677999999999999999999999998
Q ss_pred CCCCch
Q 000880 731 LPPQME 736 (1239)
Q Consensus 731 ~~~~~~ 736 (1239)
+.....
T Consensus 270 ~l~~~p 275 (429)
T KOG0595|consen 270 FLAANP 275 (429)
T ss_pred hcccCc
Confidence 766554
No 23
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-45 Score=420.25 Aligned_cols=274 Identities=30% Similarity=0.515 Sum_probs=238.5
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCc
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~ 497 (1239)
.+..+||.+.+.||.|+|++|++|+.+.+++.||||++.++... ......+.+|-.+|.+| .||.|+++|..|.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ---- 144 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ---- 144 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee----
Confidence 34468999999999999999999999999999999999765432 22345678899999999 8999999998873
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
+...+|+|+||++ |+|.++|.+.+.|++..++.|+.||+.||+
T Consensus 145 ------------------------------------D~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAle 188 (604)
T KOG0592|consen 145 ------------------------------------DEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALE 188 (604)
T ss_pred ------------------------------------cccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 4578999999996 799999999999999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||++|||||||||+|||||.|+++||+|||.|+.+......... +......+.+..+++||..|.+||+|.. ...+
T Consensus 189 ylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~--~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~ 265 (604)
T KOG0592|consen 189 YLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQEN--PVDPNQASSRRSSFVGTAEYVSPELLND-SPAG 265 (604)
T ss_pred HHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccC--ccCcccccCcccceeeeecccCHHHhcC-CCCC
Confidence 999999999999999999999999999999999998765543321 1111112222477999999999999998 6789
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
+.+|+|+||||||+|+. ||....+-.++.+++.....+|+.++ +.+.+||+++|..||.+|+|+.+|.+||||.
T Consensus 266 ~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 266 PSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred cccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhCcccc
Confidence 99999999999999995 99999998888888888888888765 6899999999999999999999999999999
Q ss_pred CchHHH
Q 000880 734 QMEYEL 739 (1239)
Q Consensus 734 ~~~~~~ 739 (1239)
.+.|+.
T Consensus 343 ~Vdw~n 348 (604)
T KOG0592|consen 343 GVDWEN 348 (604)
T ss_pred cCChhh
Confidence 999886
No 24
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=393.96 Aligned_cols=257 Identities=30% Similarity=0.477 Sum_probs=231.4
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
.+++|+.++.||.|+||.|.+++++.+|..||+|++++.. ......+...+|..+|+.+.||+++++++.|.
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~------- 114 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK------- 114 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-------
Confidence 3689999999999999999999999999999999998654 24445677889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
+..++||||||++ |.|..++++.++|+++.+++|+.||+.||+|||
T Consensus 115 ---------------------------------d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH 161 (355)
T KOG0616|consen 115 ---------------------------------DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLH 161 (355)
T ss_pred ---------------------------------cCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 3578999999996 589999999999999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+++|++|||||+|||||.+|++||+|||+|+.+... ..+.||||.|+|||+++. ..|+.++
T Consensus 162 ~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r------------------T~TlCGTPeYLAPEii~s-k~ynkav 222 (355)
T KOG0616|consen 162 SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR------------------TWTLCGTPEYLAPEIIQS-KGYNKAV 222 (355)
T ss_pred hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc------------------EEEecCCccccChHHhhc-CCCCcch
Confidence 999999999999999999999999999999976422 245799999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC-----CCHHHHHhccC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR-----PSATELLQDAL 731 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R-----Pta~eiL~~~~ 731 (1239)
|+|||||++|||+. ||....+..+..+++..+..+|+.+ ++++++||+++|+.|-.+| ....+|..|+|
T Consensus 223 DWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~w 299 (355)
T KOG0616|consen 223 DWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPW 299 (355)
T ss_pred hHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcc
Confidence 99999999999995 9999999999999998888888765 4599999999999999999 46789999999
Q ss_pred CCCchHHHH
Q 000880 732 PPQMEYELL 740 (1239)
Q Consensus 732 ~~~~~~~~~ 740 (1239)
|....|..+
T Consensus 300 F~~v~W~~i 308 (355)
T KOG0616|consen 300 FKGVDWEAI 308 (355)
T ss_pred cccccHHHH
Confidence 999988754
No 25
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4e-45 Score=417.57 Aligned_cols=278 Identities=28% Similarity=0.483 Sum_probs=229.4
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
.++||+++.+||+|+||.||+|+.+.||..||+|+++++.. .......+..|-.+|....+|+||++|.+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-------- 210 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-------- 210 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--------
Confidence 36899999999999999999999999999999999987653 334556788999999999999999999888
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
++..++|+||||++ |++..+|...+.+++..+++|+.+++.|++.||
T Consensus 211 --------------------------------QD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH 258 (550)
T KOG0605|consen 211 --------------------------------QDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIH 258 (550)
T ss_pred --------------------------------cCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHH
Confidence 34679999999996 599999999999999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhcccccccc------------CCCCCCCCCC----cc------------
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ------------DAAFPTDTGG----VS------------ 631 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~------------~~~~~~~~~~----~~------------ 631 (1239)
+.|+|||||||+|+|||..||+||+|||||.-+....... ....+.+... .+
T Consensus 259 ~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 338 (550)
T KOG0605|consen 259 QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWK 338 (550)
T ss_pred HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHH
Confidence 9999999999999999999999999999996543211100 0000001110 00
Q ss_pred ----ccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc--CCCCCccccCC
Q 000880 632 ----VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKF 702 (1239)
Q Consensus 632 ----~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~ 702 (1239)
.-..+.+|||.|||||++.+ ..|+..+|+||||||+||||. ||....+.+...+++.-. ..+|.. ...+
T Consensus 339 ~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-~~~s 416 (550)
T KOG0605|consen 339 RNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-VDLS 416 (550)
T ss_pred hhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-Cccc
Confidence 01236799999999999999 569999999999999999985 898888888777665433 334443 3456
Q ss_pred HHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCchHHHHHH
Q 000880 703 SEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYELLDN 742 (1239)
Q Consensus 703 ~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~ 742 (1239)
+++.|||.+||+ ||++|. +++||.+||||..+.|+.+..
T Consensus 417 ~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~ 458 (550)
T KOG0605|consen 417 DEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLRE 458 (550)
T ss_pred HHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhc
Confidence 899999999999 999998 599999999999999986644
No 26
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-46 Score=395.34 Aligned_cols=249 Identities=30% Similarity=0.554 Sum_probs=210.4
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeee-eeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ-AWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~-~~~e~~~~~~~ 501 (1239)
+.+|+++++||+|+||+||++.+..+|..+|.|.++....+....+....|+.+|++|+|||||++++ .|.+
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~------- 90 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIE------- 90 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc-------
Confidence 57899999999999999999999999999999999877777777888999999999999999999996 3321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
+...++||||||+ |+|.+.+.. ...+++..+|+++.|++.||.
T Consensus 91 --------------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~ 138 (375)
T KOG0591|consen 91 --------------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALY 138 (375)
T ss_pred --------------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHH
Confidence 2345899999996 799998863 345999999999999999999
Q ss_pred HHHh--CC--ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 000880 577 HIHG--QG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 652 (1239)
Q Consensus 577 yLHs--~g--IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 652 (1239)
++|+ .. |+||||||.||+|+.+|.+||+|||+++++..... ...+.+|||.||+||.+.+
T Consensus 139 ~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t---------------fA~S~VGTPyYMSPE~i~~- 202 (375)
T KOG0591|consen 139 HCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT---------------FAHSLVGTPYYMSPERIHE- 202 (375)
T ss_pred HHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH---------------HHHhhcCCCcccCHHHHhc-
Confidence 9999 44 99999999999999999999999999998753321 1357899999999999998
Q ss_pred CCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 653 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 653 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
..|++++||||+||++|||+. ||.+..--+...++ ..+..|+.+ ...+.++..||..|++.||..||+.-.+++
T Consensus 203 ~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI--~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 203 SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI--EQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH--HcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 679999999999999999973 99887444433333 355777666 455668899999999999999998654444
No 27
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=9.9e-45 Score=386.51 Aligned_cols=258 Identities=28% Similarity=0.462 Sum_probs=213.5
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++.|+.+.++|+|+||.||+|+++.||+.||||++.-++.+....+-.+||+++|++|+|||+|.++.+|-
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr--------- 71 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR--------- 71 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH---------
Confidence 35788899999999999999999999999999999866666677778899999999999999999998872
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....+++|+|||+.++.+.|.... .++...+..+++|++.|+.|+|++
T Consensus 72 -------------------------------rkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~ 120 (396)
T KOG0593|consen 72 -------------------------------RKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN 120 (396)
T ss_pred -------------------------------hcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc
Confidence 357899999999998888887654 599999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
++|||||||+||||+.+|.+||||||+|+.+..+. -..|.++.|.||.|||.+.|...|+..+||
T Consensus 121 n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg---------------d~YTDYVATRWYRaPELLvGDtqYG~pVDi 185 (396)
T KOG0593|consen 121 NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG---------------DNYTDYVATRWYRAPELLVGDTQYGKPVDI 185 (396)
T ss_pred CeecccCChhheEEecCCcEEeccchhhHhhcCCc---------------chhhhhhhhhhccChhhhcccCcCCCcccc
Confidence 99999999999999999999999999999875321 113667999999999999998889999999
Q ss_pred HHHHHHHHHhhc--CCchh-HHHHHHHHhhhhcCC-------------------CC-----C----ccccCCHHHHHHHH
Q 000880 662 YSLGIVFFELWH--PFSTA-MERQIVLSDLKQKGE-------------------LP-----P----SWVAKFSEQESLLR 710 (1239)
Q Consensus 662 wSlGviL~ELlt--Pf~~~-~~~~~~~~~~~~~~~-------------------~p-----~----~~~~~~~e~~~LI~ 710 (1239)
||+||++.||++ |.++. ++-.....+...-+. +| . ..+..+.-+.+|++
T Consensus 186 WAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k 265 (396)
T KOG0593|consen 186 WAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLK 265 (396)
T ss_pred hhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHH
Confidence 999999999997 55443 332222222111111 11 1 12223345679999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCc
Q 000880 711 RLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
.||..||++|++.+++|.|++|.+.
T Consensus 266 ~cL~~dP~~R~sc~qll~H~yFd~~ 290 (396)
T KOG0593|consen 266 KCLKMDPDDRLSCEQLLHHPYFDGF 290 (396)
T ss_pred HHhcCCccccccHHHHhcChHHHHH
Confidence 9999999999999999999999444
No 28
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-44 Score=404.28 Aligned_cols=261 Identities=31% Similarity=0.473 Sum_probs=215.7
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCcc
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~ 498 (1239)
-.++++|.++++||.|+||.||+|+.+.+|..||||.++.+..+.+.. .-+||++.|++|+ |||||++.+++.++
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~--- 81 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDN--- 81 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhcc---
Confidence 345789999999999999999999999999999999998776664433 3568999999998 99999999887553
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~y 577 (1239)
...+|+|||||+.+|++++..+ ..|+++.++.|+.||+.||+|
T Consensus 82 ------------------------------------~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~h 125 (538)
T KOG0661|consen 82 ------------------------------------DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAH 125 (538)
T ss_pred ------------------------------------CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHH
Confidence 2389999999999999999765 459999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
+|.+|+.||||||+|||+.....+||+|||+|+.+... ...|.++-|.+|.|||+|.....|+.
T Consensus 126 iHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk----------------pPYTeYVSTRWYRAPEvLLrs~~Ys~ 189 (538)
T KOG0661|consen 126 IHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK----------------PPYTEYVSTRWYRAPEVLLRSGYYSS 189 (538)
T ss_pred HHhcCcccccCChhheEecccceeEecccccccccccC----------------CCcchhhhcccccchHHhhhccccCC
Confidence 99999999999999999999999999999999965321 12367899999999999988788999
Q ss_pred chhhHHHHHHHHHhhc--C-CchhHHHHHHHHhhh-------------------hcCCCC--------CccccCCHHHHH
Q 000880 658 KADMYSLGIVFFELWH--P-FSTAMERQIVLSDLK-------------------QKGELP--------PSWVAKFSEQES 707 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt--P-f~~~~~~~~~~~~~~-------------------~~~~~p--------~~~~~~~~e~~~ 707 (1239)
+.||||+|||++|+++ | |.+..+.....++.. .+..+| .-.+..++++.+
T Consensus 190 pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~ 269 (538)
T KOG0661|consen 190 PVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAAS 269 (538)
T ss_pred chHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHH
Confidence 9999999999999975 5 333444333322211 011122 123346678999
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 708 LLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 708 LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||.+|++.||.+||||.++|+||||+.-.
T Consensus 270 li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 270 LIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HHHHHhcCCCccCccHHHHhcCccccccc
Confidence 99999999999999999999999998653
No 29
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-43 Score=413.12 Aligned_cols=264 Identities=26% Similarity=0.390 Sum_probs=227.7
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCc
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~ 497 (1239)
...+++|.++++||+|+||+|+++..+.+++.||||++++... ..+..+....|..++... +||.++.++.+|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 4468999999999999999999999999999999999987653 444567788899998888 599999999887
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
+...++|+||||+.|+-..++...+.|++..++.|+..|+.||+|
T Consensus 439 -----------------------------------QT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~f 483 (694)
T KOG0694|consen 439 -----------------------------------QTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQF 483 (694)
T ss_pred -----------------------------------ccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHH
Confidence 346899999999965334444556789999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++||||||||.+|||||.+|++||+|||+++..-.. -..++++||||.|||||++++ ..|+.
T Consensus 484 LH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~---------------g~~TsTfCGTpey~aPEil~e-~~Yt~ 547 (694)
T KOG0694|consen 484 LHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ---------------GDRTSTFCGTPEFLAPEVLTE-QSYTR 547 (694)
T ss_pred HHhcCceeeecchhheEEcccCcEEecccccccccCCC---------------CCccccccCChhhcChhhhcc-Ccccc
Confidence 99999999999999999999999999999999853111 113467899999999999998 78999
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 729 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 729 (1239)
++|||||||+||||+. ||.+.++.+..-.++.....+|.. .+.++.++|+++|.+||++|.. +.+|.+|
T Consensus 548 aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 548 AVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCc---ccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 9999999999999995 999999999888888766666643 3459999999999999999985 6889999
Q ss_pred cCCCCchHHHHHH
Q 000880 730 ALPPQMEYELLDN 742 (1239)
Q Consensus 730 ~~~~~~~~~~~~~ 742 (1239)
|||....|+.+..
T Consensus 625 pFFr~i~w~~L~~ 637 (694)
T KOG0694|consen 625 PFFRSIDWDDLLN 637 (694)
T ss_pred CccccCCHHHHhh
Confidence 9999999876543
No 30
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-43 Score=399.82 Aligned_cols=268 Identities=27% Similarity=0.431 Sum_probs=222.4
Q ss_pred CCCCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecC
Q 000880 417 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 496 (1239)
Q Consensus 417 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~ 496 (1239)
....+..+.|+.+++||+|.||.||+|++..+|+.||+|+++.............|||.+|++|+||||+++.+...+.
T Consensus 110 ~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~- 188 (560)
T KOG0600|consen 110 GWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK- 188 (560)
T ss_pred cccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec-
Confidence 3345567889999999999999999999999999999999998776666677889999999999999999999887543
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL 575 (1239)
....+|||+|||+.+|..++... -+|++.++..|+.||+.||
T Consensus 189 -------------------------------------~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl 231 (560)
T KOG0600|consen 189 -------------------------------------LSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGL 231 (560)
T ss_pred -------------------------------------CCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHH
Confidence 24578999999999999999864 4799999999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 655 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 655 (1239)
+|||++||+|||||.+|||||.+|.+||+|||+|+++.... ....|+.+-|++|.|||.|.|...|
T Consensus 232 ~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~--------------~~~~T~rVvTLWYRpPELLLG~t~Y 297 (560)
T KOG0600|consen 232 EYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG--------------SAPYTSRVVTLWYRPPELLLGATSY 297 (560)
T ss_pred HHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC--------------CcccccceEEeeccChHHhcCCccc
Confidence 99999999999999999999999999999999999874332 1235778999999999999998899
Q ss_pred CcchhhHHHHHHHHHhhc--C-CchhHHHHHHHHhhhhcCCC----------C----------------CccccCCHHHH
Q 000880 656 DEKADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGEL----------P----------------PSWVAKFSEQE 706 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt--P-f~~~~~~~~~~~~~~~~~~~----------p----------------~~~~~~~~e~~ 706 (1239)
+.++|+||.||||.||+. | |.+..+.+.+..+....+.. | ..+...++.+.
T Consensus 298 g~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l 377 (560)
T KOG0600|consen 298 GTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASAL 377 (560)
T ss_pred ccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHH
Confidence 999999999999999996 4 34444444443333222211 1 01122334667
Q ss_pred HHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 707 SLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 707 ~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
+|+..||+.||.+|.||.++|+++||...+
T Consensus 378 ~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p 407 (560)
T KOG0600|consen 378 DLLEKLLSLDPDKRGTASSALQSEYFTTEP 407 (560)
T ss_pred HHHHHHhccCccccccHHHHhcCcccccCC
Confidence 999999999999999999999999995443
No 31
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=388.62 Aligned_cols=264 Identities=26% Similarity=0.372 Sum_probs=223.4
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
..++|++..+||.|..++||+|++..++..||||+++...+... ...+.+|+..|+.++||||++++.+|+.
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv------- 95 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVV------- 95 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEe-------
Confidence 45899999999999999999999999999999999998877644 6789999999999999999999988843
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
...+|+||.||. ||+.+++... ..+++..+..++++++.||.||
T Consensus 96 ---------------------------------~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YL 142 (516)
T KOG0582|consen 96 ---------------------------------DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYL 142 (516)
T ss_pred ---------------------------------cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHH
Confidence 467899999995 7999999764 3599999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc-ccCCCCCCc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDE 657 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~-l~~~~~~~~ 657 (1239)
|.+|.||||||+.||||+.+|.|||+|||.+..+...... ...+.++++|||+|||||+ .+....|+.
T Consensus 143 H~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R-----------~~~rf~tfvgtp~wmAPEvl~q~~~GYdf 211 (516)
T KOG0582|consen 143 HQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR-----------QVTRFNTFVGTPCWMAPEVLMQQLHGYDF 211 (516)
T ss_pred HhcCceecccccccEEEcCCCcEEEcCceeeeeecccCce-----------eeEeeccccCcccccChHHhhhcccCccc
Confidence 9999999999999999999999999999998766432200 0111267899999999999 555567999
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCC-------ccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-------SWVAKFSEQESLLRRLMSPSPSDRPSATELL 727 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 727 (1239)
|+|||||||+..||.+ ||....++..++..+...+..+. ........++.+|..||.+||.+|||+.++|
T Consensus 212 KaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLl 291 (516)
T KOG0582|consen 212 KADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLL 291 (516)
T ss_pred hhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 9999999999999997 99998888888877764433221 1111223678999999999999999999999
Q ss_pred hccCCCCchH
Q 000880 728 QDALPPQMEY 737 (1239)
Q Consensus 728 ~~~~~~~~~~ 737 (1239)
+|+||++...
T Consensus 292 kh~FFk~~k~ 301 (516)
T KOG0582|consen 292 KHAFFKKAKS 301 (516)
T ss_pred ccHHHhhccc
Confidence 9999988753
No 32
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.2e-43 Score=399.24 Aligned_cols=254 Identities=27% Similarity=0.420 Sum_probs=223.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+++|.+.+.||+|+||.||+|+.+.|.+.||||.+.+..........+.+|+++++.|+|||||.+++.|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf---------- 70 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF---------- 70 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh----------
Confidence 4688999999999999999999999999999999987777767778899999999999999999999765
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
+....+|+|.|||-|+|..++...+.++++.+..++.|++.||.|||+++
T Consensus 71 ------------------------------Et~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r 120 (808)
T KOG0597|consen 71 ------------------------------ETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR 120 (808)
T ss_pred ------------------------------cccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 23578999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+|||+||.|||++..+++|+||||+|+..... ....++..|||.|||||.+.+ ..|+..+|+|
T Consensus 121 ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~---------------t~vltsikGtPlYmAPElv~e-~pyd~~sDlW 184 (808)
T KOG0597|consen 121 ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN---------------TSVLTSIKGTPLYMAPELVEE-QPYDHTSDLW 184 (808)
T ss_pred cccccCCcceeeecCCCceeechhhhhhhcccC---------------ceeeeeccCcccccCHHHHcC-CCccchhhHH
Confidence 999999999999999999999999999975422 122366789999999999998 6799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
|+|||+|||++ ||....-.+....++......|+ ..++.+.+|+..+|.+||.+|.|+.+++.|||.++.
T Consensus 185 slGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~---~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 185 SLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS---TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc---cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 99999999996 78776665555555543333332 667799999999999999999999999999987654
No 33
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=9.3e-43 Score=366.60 Aligned_cols=259 Identities=28% Similarity=0.457 Sum_probs=216.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|..+++||+|.||.||+|++..||+.||||+|+..+.........+||++.|+.++||||+.++++|-
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~---------- 71 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP---------- 71 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc----------
Confidence 4677889999999999999999999999999999988777677788999999999999999999999883
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...++.||+||++.+|..+++.. ..++...+..|+.++++||+|||++.
T Consensus 72 ------------------------------~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~ 121 (318)
T KOG0659|consen 72 ------------------------------HKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW 121 (318)
T ss_pred ------------------------------CCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh
Confidence 24578999999999999999754 45999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||.|+||+++|.+||+|||+|+.+..+... .+..+-|.+|.|||.+-|...|+..+|||
T Consensus 122 IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~---------------~~~~V~TRWYRAPELLfGsr~Yg~~VDmW 186 (318)
T KOG0659|consen 122 ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI---------------QTHQVVTRWYRAPELLFGSRQYGTGVDMW 186 (318)
T ss_pred hhcccCCccceEEcCCCcEEeecccchhccCCCCcc---------------cccceeeeeccChHHhccchhcCCcchhh
Confidence 999999999999999999999999999987543311 23348899999999999988999999999
Q ss_pred HHHHHHHHhhc--CCchhHHH-HHHHHhhhhcCC--------------------CC-----CccccCCHHHHHHHHHccC
Q 000880 663 SLGIVFFELWH--PFSTAMER-QIVLSDLKQKGE--------------------LP-----PSWVAKFSEQESLLRRLMS 714 (1239)
Q Consensus 663 SlGviL~ELlt--Pf~~~~~~-~~~~~~~~~~~~--------------------~p-----~~~~~~~~e~~~LI~~~L~ 714 (1239)
|.|||+.||+. ||.+.... +..-.+.+.-+. .| ..++..++++.+|+..||.
T Consensus 187 avGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ 266 (318)
T KOG0659|consen 187 AVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLT 266 (318)
T ss_pred hHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhc
Confidence 99999999984 77654332 222222111110 11 1233445677899999999
Q ss_pred CCCCCCCCHHHHHhccCCCCchH
Q 000880 715 PSPSDRPSATELLQDALPPQMEY 737 (1239)
Q Consensus 715 ~dP~~RPta~eiL~~~~~~~~~~ 737 (1239)
.||.+|+|+.|+|+|+||.+.+.
T Consensus 267 ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 267 YNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred cCchhcccHHHHhcchhhhcCCC
Confidence 99999999999999999987653
No 34
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-42 Score=400.73 Aligned_cols=256 Identities=30% Similarity=0.522 Sum_probs=218.8
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcC-CCceeeeeeeeeecC
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 496 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~ 496 (1239)
...+.|.+.+.||+|+||+|++|.+..+|..||||+++..... ......+.+|+.+++.++ ||||++++.++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 3467899999999999999999999999999999987654211 134556779999999998 999999998872
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL 575 (1239)
....+|||||||. |+|.+.+...+++.+..++.+++||+.|+
T Consensus 91 -------------------------------------t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav 133 (370)
T KOG0583|consen 91 -------------------------------------TPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAV 133 (370)
T ss_pred -------------------------------------cCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 2345999999996 59999999989999999999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCC-CCEEEeecCcchhcc-ccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLK-LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 653 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~-~~vKL~DFGlA~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 653 (1239)
+|||++||+||||||+|||++.+ +++||+|||++.... .. ....+.||||.|+|||++.+..
T Consensus 134 ~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------~~l~t~cGsp~Y~aPEvl~~~~ 197 (370)
T KOG0583|consen 134 AYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------GLLKTFCGSPAYAAPEVLSGKG 197 (370)
T ss_pred HHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------CcccCCCCCcccCCHHHhCCCC
Confidence 99999999999999999999999 999999999998752 11 1135679999999999999965
Q ss_pred CC-CcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 654 KI-DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 654 ~~-~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
.| +.++||||+||+||.|++ ||...........+......+|.... ++++++||++||..||.+|+|+.+|+.|
T Consensus 198 ~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 198 TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 25 589999999999999997 88886666666665555555565443 7899999999999999999999999999
Q ss_pred cCCCC
Q 000880 730 ALPPQ 734 (1239)
Q Consensus 730 ~~~~~ 734 (1239)
+||+.
T Consensus 276 ~w~~~ 280 (370)
T KOG0583|consen 276 PWFQK 280 (370)
T ss_pred hhhcc
Confidence 99997
No 35
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.5e-42 Score=374.53 Aligned_cols=269 Identities=27% Similarity=0.402 Sum_probs=220.5
Q ss_pred CCCCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecC
Q 000880 417 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 496 (1239)
Q Consensus 417 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~ 496 (1239)
+...+.+++|+.+.+|++|+||.||+|+++.|++.||+|+++.........-.-+||+.+|.+++|||||.+-.+.+..
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~- 147 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS- 147 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc-
Confidence 5567778999999999999999999999999999999999987654444445678999999999999999998775321
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL 575 (1239)
+...+|||||||..+|..+++... +|...+++.++.|+++|+
T Consensus 148 -------------------------------------~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~gl 190 (419)
T KOG0663|consen 148 -------------------------------------NMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGL 190 (419)
T ss_pred -------------------------------------ccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence 345699999999999999998766 799999999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 655 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 655 (1239)
+|||++.|+||||||+|+|+...|.+||+|||+|+.+..+-. ..|..+-|.+|.|||.|.|...|
T Consensus 191 k~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k---------------~~T~lVVTLWYRaPELLLG~~ty 255 (419)
T KOG0663|consen 191 KHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK---------------PYTPLVVTLWYRAPELLLGAKTY 255 (419)
T ss_pred HHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcc---------------cCcceEEEeeecCHHHhcCCccc
Confidence 999999999999999999999999999999999998764421 13667899999999999998899
Q ss_pred CcchhhHHHHHHHHHhhc--C-CchhHHHHHHHHhhhhcCC-------------------CCC--------cccc--CCH
Q 000880 656 DEKADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGE-------------------LPP--------SWVA--KFS 703 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt--P-f~~~~~~~~~~~~~~~~~~-------------------~p~--------~~~~--~~~ 703 (1239)
+.+.||||+|||+.||++ | |.+..+.....++...-+. ++. .+.. .+.
T Consensus 256 st~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse 335 (419)
T KOG0663|consen 256 STAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSE 335 (419)
T ss_pred CcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccch
Confidence 999999999999999996 4 3344443333333221111 010 0001 224
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 000880 704 EQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 738 (1239)
Q Consensus 704 e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 738 (1239)
...+|+..+|..||.+|.||.+.|+|.||...+..
T Consensus 336 ~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p 370 (419)
T KOG0663|consen 336 QGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLP 370 (419)
T ss_pred hHHHHHHHHhccCccccccHHHhhcccccccCCCC
Confidence 56799999999999999999999999999886543
No 36
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-42 Score=398.89 Aligned_cols=257 Identities=32% Similarity=0.514 Sum_probs=228.1
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecC-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~-~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
+..-|++.+.||+|+-|.|.+|+|..||+.+|||+|.+. ..+......+.+|+-+|+.+.||||+++|++|.
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe------- 82 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE------- 82 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec-------
Confidence 456788999999999999999999999999999999876 344445567899999999999999999999983
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
+..++|+|.||++ |.|.+++...+++++.++.+++.||+.|+.|||
T Consensus 83 ---------------------------------~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH 129 (786)
T KOG0588|consen 83 ---------------------------------NKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCH 129 (786)
T ss_pred ---------------------------------cCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3578999999996 689999999999999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
..+|+||||||+|+|||..++|||+|||+|..-..... -.+.||+|.|+|||++.|.++-+.++
T Consensus 130 ~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl----------------LeTSCGSPHYA~PEIV~G~pYdG~~s 193 (786)
T KOG0588|consen 130 AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL----------------LETSCGSPHYAAPEIVSGRPYDGRPS 193 (786)
T ss_pred hhcceeccCCchhhhhhcccCEeeeccceeecccCCcc----------------ccccCCCcccCCchhhcCCCCCCCcc
Confidence 99999999999999999999999999999986432221 24569999999999999987778999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||||.|||||.|++ ||.+..-+..+.+.......+|. .+++++++||++||..||.+|.|.++|++|||.....
T Consensus 194 DVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs---~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 194 DVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS---NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred ccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC---cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 99999999999998 99988888888887776777773 5677999999999999999999999999999987664
Q ss_pred H
Q 000880 737 Y 737 (1239)
Q Consensus 737 ~ 737 (1239)
.
T Consensus 271 ~ 271 (786)
T KOG0588|consen 271 S 271 (786)
T ss_pred C
Confidence 3
No 37
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=393.96 Aligned_cols=248 Identities=33% Similarity=0.487 Sum_probs=209.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcE-EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~-vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++.+.+.||+|+||+||+|.|+ |+. ||||++.....+......|.+|+.+|++++|||||+++|+|.++
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~------- 111 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP------- 111 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-------
Confidence 45566677999999999999998 667 99999986655544577899999999999999999999998543
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...++|||||++ |+|.++++. ...++...+..++.||++||.|||
T Consensus 112 --------------------------------~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH 159 (362)
T KOG0192|consen 112 --------------------------------PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH 159 (362)
T ss_pred --------------------------------CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 115799999996 799999987 577999999999999999999999
Q ss_pred hCC-ccccCCCcccEEEcCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-CCCCC
Q 000880 580 GQG-IIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-WPKID 656 (1239)
Q Consensus 580 s~g-IiHrDLKp~NILl~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~~~ 656 (1239)
+++ ||||||||+|||++.++ ++||+|||+++...... ...+...||+.|||||++.+ ...|+
T Consensus 160 ~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---------------~~~~~~~GT~~wMAPEv~~~~~~~~~ 224 (362)
T KOG0192|consen 160 SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---------------TSMTSVAGTYRWMAPEVLRGEKSPYT 224 (362)
T ss_pred cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc---------------ccccCCCCCccccChhhhcCCCCcCC
Confidence 999 99999999999999997 99999999998653211 12344689999999999995 25799
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
.|+|||||||+||||+| ||......+...... .....|+....+++.+..||.+||+.||..||++.+|+.
T Consensus 225 ~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~-~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 225 EKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVV-VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred ccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 99999999999999997 999888844444433 355566655568889999999999999999999999985
No 38
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-42 Score=376.27 Aligned_cols=275 Identities=27% Similarity=0.408 Sum_probs=222.6
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
.|..++.||+|+||.|+.+.++.+|+.||||+|..........++.+||+++|+.++|+||+.+++.+..+
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~--------- 93 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPP--------- 93 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccc---------
Confidence 44457899999999999999999999999999975556666788999999999999999999999887321
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
....-..+|+|+|+|+.+|.++++....+++..+..+++||++||+|+|+.+|+
T Consensus 94 --------------------------~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnVi 147 (359)
T KOG0660|consen 94 --------------------------SRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVI 147 (359)
T ss_pred --------------------------cccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccccc
Confidence 112345789999999999999999988899999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
||||||+|+|++.++.+||||||+|+..... ......|.++-|.+|.|||++.....|+.+.||||+
T Consensus 148 HRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSv 214 (359)
T KOG0660|consen 148 HRDLKPSNLLLNADCDLKICDFGLARYLDKF-------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSV 214 (359)
T ss_pred ccccchhheeeccCCCEEeccccceeecccc-------------CcccchhcceeeeeecCHHHHhccccccchhhhhhh
Confidence 9999999999999999999999999976422 112235788999999999999887889999999999
Q ss_pred HHHHHHhhc--C---CchhHHH-------------HH--------HHHhhhhcCCCC-----CccccCCHHHHHHHHHcc
Q 000880 665 GIVFFELWH--P---FSTAMER-------------QI--------VLSDLKQKGELP-----PSWVAKFSEQESLLRRLM 713 (1239)
Q Consensus 665 GviL~ELlt--P---f~~~~~~-------------~~--------~~~~~~~~~~~p-----~~~~~~~~e~~~LI~~~L 713 (1239)
||||.||++ | +...... +. ...-+...+..| ..+++..|.+.+|+.+||
T Consensus 215 GCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL 294 (359)
T KOG0660|consen 215 GCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKML 294 (359)
T ss_pred hHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHh
Confidence 999999996 3 2211111 00 011111122222 244567789999999999
Q ss_pred CCCCCCCCCHHHHHhccCCCCchHHHHHHHHHhcCCCCCCcchhhh
Q 000880 714 SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKV 759 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 759 (1239)
..||.+|+|++++|+||+ ++.+++++|++.....
T Consensus 295 ~fdP~kRita~eAL~hPY------------l~~~hdp~dEP~~~~~ 328 (359)
T KOG0660|consen 295 VFDPKKRITAEEALAHPY------------LAPYHDPEDEPVCQPI 328 (359)
T ss_pred ccCccccCCHHHHhcChh------------hhhhcCCccCCCCCCC
Confidence 999999999999999984 4456777777765443
No 39
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=383.27 Aligned_cols=261 Identities=34% Similarity=0.529 Sum_probs=212.7
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.++...+.||+|+||.||++.++.+|..+|||.+...... ..+.+.+|+.+|++|+|||||+++|.....
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~-------- 86 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSR-------- 86 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccc--------
Confidence 4577789999999999999999999999999998765322 266789999999999999999999863111
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....++|.|||++ |+|.+++...+ .++++.++.+++||++||+|||++
T Consensus 87 ------------------------------~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 87 ------------------------------ENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred ------------------------------cCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0147899999996 69999999877 799999999999999999999999
Q ss_pred CccccCCCcccEEEcC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 582 GIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
|||||||||+|||++. ++.+||+|||+++...... ..........|||.|||||++.......+++|
T Consensus 137 g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sD 204 (313)
T KOG0198|consen 137 GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESD 204 (313)
T ss_pred CEeccCcccceEEEeCCCCeEEeccCcccccccccc------------ccccccccccCCccccCchhhcCCCcCCccch
Confidence 9999999999999999 7999999999998754200 00112345789999999999985223345999
Q ss_pred hHHHHHHHHHhhc---CCch-hHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 661 MYSLGIVFFELWH---PFST-AMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~-~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||||||++.||+| ||.. .........+... ...|......++++++||.+|+..||..||||.++|+|||..+..
T Consensus 205 iWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~-~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 205 IWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE-DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred hhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc-CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 9999999999998 6665 2334444444443 355656666788999999999999999999999999999988765
Q ss_pred H
Q 000880 737 Y 737 (1239)
Q Consensus 737 ~ 737 (1239)
.
T Consensus 284 ~ 284 (313)
T KOG0198|consen 284 I 284 (313)
T ss_pred c
Confidence 4
No 40
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-41 Score=378.00 Aligned_cols=278 Identities=25% Similarity=0.401 Sum_probs=232.8
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
+++|++++.||+|.-|+||+|+.+.++..+|+|++.+... +.....+...|-.||+.++||.++.+|+.|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f--------- 146 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF--------- 146 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee---------
Confidence 5789999999999999999999999999999999986543 233456788899999999999999999887
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
+...+.|++||||+ |+|..+++++ ..|+++.+++|+.+++.||+||
T Consensus 147 -------------------------------et~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYL 195 (459)
T KOG0610|consen 147 -------------------------------ETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYL 195 (459)
T ss_pred -------------------------------eccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHH
Confidence 23578999999996 5899888765 4599999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccc-cccccC-----------------CCCC-----CCC--------
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQD-----------------AAFP-----TDT-------- 627 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~-~~~~~~-----------------~~~~-----~~~-------- 627 (1239)
|-+|||+|||||+||||.++|||.|+||-++..... +..... ..+. ...
T Consensus 196 HmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~ 275 (459)
T KOG0610|consen 196 HMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDES 275 (459)
T ss_pred HhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcccccccccccc
Confidence 999999999999999999999999999999976532 111100 0000 000
Q ss_pred ----------CCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhh---cCCchhHHHHHHHHhhhhcCCC
Q 000880 628 ----------GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGEL 694 (1239)
Q Consensus 628 ----------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELl---tPf~~~~~~~~~~~~~~~~~~~ 694 (1239)
........+++||-.|+|||++.| ...+.++|||+|||+||||+ |||.+....+....++.+...+
T Consensus 276 ~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~F 354 (459)
T KOG0610|consen 276 ASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKF 354 (459)
T ss_pred ccccchhhhcCCCCccccccccccccccceeeec-CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcC
Confidence 111234567899999999999999 56899999999999999998 5999999999998888877777
Q ss_pred CCccccCCHHHHHHHHHccCCCCCCCCC----HHHHHhccCCCCchHHHHHH
Q 000880 695 PPSWVAKFSEQESLLRRLMSPSPSDRPS----ATELLQDALPPQMEYELLDN 742 (1239)
Q Consensus 695 p~~~~~~~~e~~~LI~~~L~~dP~~RPt----a~eiL~~~~~~~~~~~~~~~ 742 (1239)
|... ..+..++|||+++|.+||.+|.. |.+|-+||||+++.|.++..
T Consensus 355 p~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~ 405 (459)
T KOG0610|consen 355 PEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRC 405 (459)
T ss_pred CCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheec
Confidence 7654 55678999999999999999998 99999999999999996543
No 41
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-43 Score=364.15 Aligned_cols=260 Identities=27% Similarity=0.445 Sum_probs=226.7
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
.+.+.|++.++||+|+|+.||++.+..+|+.+|+|+|+.+.-+....+++.+|+.+-+.|+|||||+++..+
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-------- 79 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-------- 79 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh--------
Confidence 456789999999999999999999999999999999987776666778899999999999999999998665
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....+.|||+|++.| +|..-+-.+--+++..+-.+++||++||.|+|
T Consensus 80 --------------------------------~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH 127 (355)
T KOG0033|consen 80 --------------------------------QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCH 127 (355)
T ss_pred --------------------------------cccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 235678999999964 78776666667899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 580 GQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
.+||||||+||+|+|+-+. --+||+|||+|..+.... ...+++|||.|||||++.. ..|+
T Consensus 128 ~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~----------------~~~G~~GtP~fmaPEvvrk-dpy~ 190 (355)
T KOG0033|consen 128 SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE----------------AWHGFAGTPGYLSPEVLKK-DPYS 190 (355)
T ss_pred hcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc----------------ccccccCCCcccCHHHhhc-CCCC
Confidence 9999999999999999654 349999999998765211 1256799999999999998 5699
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
..+|||+.|||||-|+. ||++........++......+|+ .|...++++++|+++||..||.+|.|+.+.|+|||.
T Consensus 191 kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 191 KPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWI 270 (355)
T ss_pred CcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence 99999999999999985 99987777777777776666665 999999999999999999999999999999999999
Q ss_pred CCchH
Q 000880 733 PQMEY 737 (1239)
Q Consensus 733 ~~~~~ 737 (1239)
.+.+.
T Consensus 271 ~~r~~ 275 (355)
T KOG0033|consen 271 CNRER 275 (355)
T ss_pred cchHH
Confidence 87653
No 42
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=380.64 Aligned_cols=268 Identities=27% Similarity=0.487 Sum_probs=219.8
Q ss_pred CCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC------------chhHHHHHHHHHHHHhcCCCcee
Q 000880 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------------LPVNDRILREVATLSRLQHQHVV 486 (1239)
Q Consensus 419 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------------~~~~~~~~~Ev~iL~~L~HpnIv 486 (1239)
....+++|++++.||+|.||+|.+|++..+++.||||++.+.... ....+++.+|+.+|++|.|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 345689999999999999999999999999999999999754321 11235789999999999999999
Q ss_pred eeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCC-CCHHHHH
Q 000880 487 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAW 565 (1239)
Q Consensus 487 ~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~~~~~~ 565 (1239)
+++.+.-++ ....+|||+|||...-..+....+. +++.+|+
T Consensus 172 ~LiEvLDDP--------------------------------------~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar 213 (576)
T KOG0585|consen 172 KLIEVLDDP--------------------------------------ESDKLYLVLEYCSKGEVKWCPPDKPELSEQQAR 213 (576)
T ss_pred EEEEeecCc--------------------------------------ccCceEEEEEeccCCccccCCCCcccccHHHHH
Confidence 999886332 3578999999997544445555555 9999999
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 000880 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 645 (1239)
Q Consensus 566 ~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 645 (1239)
+|+++++.||+|||.+|||||||||+|+||+++|+|||+|||.+....... ..+........+|||+|||
T Consensus 214 ~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~----------~~~~d~~L~~tvGTPAF~A 283 (576)
T KOG0585|consen 214 KYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGS----------DEGSDDQLSRTVGTPAFFA 283 (576)
T ss_pred HHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCC----------ccccHHHHhhcCCCccccc
Confidence 999999999999999999999999999999999999999999998653211 1111222234689999999
Q ss_pred cccccC---CCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 000880 646 PEIEQG---WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 719 (1239)
Q Consensus 646 PE~l~~---~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 719 (1239)
||...+ ....+++.||||+||+||-|+. ||.+....+..-+++.....+|.. +...+.+++||++||++||.+
T Consensus 284 PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~ 362 (576)
T KOG0585|consen 284 PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQ 362 (576)
T ss_pred hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc-ccccHHHHHHHHHHhhcChhh
Confidence 998876 2235689999999999999984 999998888888877755555543 356779999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 000880 720 RPSATELLQDALPPQM 735 (1239)
Q Consensus 720 RPta~eiL~~~~~~~~ 735 (1239)
|.+..+|..|||..+.
T Consensus 363 Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 363 RITLPDIKLHPWVTRD 378 (576)
T ss_pred eeehhhheecceeccC
Confidence 9999999999997655
No 43
>TIGR00418 thrS threonyl-tRNA synthetase. This model represents the threonyl-tRNA synthetase found in most organisms. This protein is a class II tRNA synthetase, and is recognized by the pfam model tRNA-synt_2b. Note that B. subtilis has closely related isozymes thrS and thrZ. The N-terminal regions are quite dissimilar between archaeal and eubacterial forms, while some eukaryotic forms are missing sequence there altogether..
Probab=100.00 E-value=4.5e-40 Score=408.65 Aligned_cols=348 Identities=13% Similarity=0.060 Sum_probs=274.6
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ecc--CCCccccccEEEEeccCCCeeeecCCCcHHH
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 856 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~i 856 (1239)
.+.|+.||+|.++.+++.|++.+++.+.++||++|.||+| ++. ++.+...++||+|.|.+|+.++|||+.|+++
T Consensus 188 ~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sg~~~~~~~emy~~~d~~~~~~~LrP~~~~~i 267 (563)
T TIGR00418 188 IGPGLPFWLPKGATIRNLLEDFVRQKQIKYGYMEVETPIMYDLELWEISGHWDNYKERMFPFTELDNREFMLKPMNCPGH 267 (563)
T ss_pred cCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCcccchhhcceeccCCCceEEEecCCCHHH
Confidence 4789999999999999999999999999999999999999 322 3467789999999999999999999999999
Q ss_pred HHHHHhCC----CCceeEEeecCeEEcCCCCC-----CCCceeEEeEEEeCCCCcccHHH---HHHHHHHHHHhcCCCCc
Q 000880 857 IRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 857 aR~~~~~~----~~P~r~~Y~g~VfR~e~~~~-----~~~ef~Q~GvEiiG~~s~~aDaE---vi~la~~~l~~lgi~~~ 924 (1239)
+|+++++. ..|+|+||+|+|||+|.... |.+||+|.|+|+||. ...+|+| +|.++.++++.||++.
T Consensus 268 ~~~~~~~~~s~~~lP~rl~~~g~~fR~E~~g~~~Gl~R~reF~q~~~~~~~~-~~~~~~e~~~~i~~~~~~~~~lgl~~- 345 (563)
T TIGR00418 268 FLIFKSSLRSYRDLPLRIAELGYSHRYEQSGELHGLMRVRGFTQDDAHIFCT-EDQIKEEFKNQFRLIQKVYSDFGFSF- 345 (563)
T ss_pred HHHHhCcCCChHHCCceeeEeccccCCCCCcCCcCcccccceEEeeeEEEcC-HHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 99998753 25999999999999996542 556799999999998 5677777 9999999999999985
Q ss_pred eEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Q 000880 925 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 1004 (1239)
Q Consensus 925 ~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~ 1004 (1239)
+.+.+|.... . +.++-+..|..
T Consensus 346 ~~~~l~~~~~-~---~~~~~~~~~~~------------------------------------------------------ 367 (563)
T TIGR00418 346 DKYELSTRDP-E---DFIGEDELWEK------------------------------------------------------ 367 (563)
T ss_pred EEEEEeCCCh-h---hhcCCHHHHHH------------------------------------------------------
Confidence 8888885210 0 01111000000
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCccccc-ccccccccccc
Q 000880 1005 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV-EGTLLAVGGRY 1083 (1239)
Q Consensus 1005 ~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~-~~~~i~~GGRY 1083 (1239)
....+.. .|+.+|+ ...+|+. ||++||+.++|++ ....+..-+.+ .+..+++||||
T Consensus 368 ---~~~~~~~---------------~l~~~~i--~~~~~~~--~g~~y~~~~~f~~-~~~lg~~~~~~t~q~~~~~g~ry 424 (563)
T TIGR00418 368 ---AEAALEE---------------ALKELGV--PYEIDPG--RGAFYGPKIDFAF-KDALGREWQCATVQLDFELPERF 424 (563)
T ss_pred ---HHHHHHH---------------HHHhCCC--ceEEcCC--CcceecceEEEEe-ecCCCCceeeceeeeccCCHhhc
Confidence 0000000 2344455 3567777 9999999999996 44333210111 12458999999
Q ss_pred cch-hhhccccccccccCCCCCCcee---eeeccHHHHHhhCC-C--CCcCCCCCCCceEEEEecCCCccHHHHHHHHHH
Q 000880 1084 DYL-LHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYP-V--DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAE 1156 (1239)
Q Consensus 1084 D~L-~~~fg~~~~~~~~g~~~~~pAv---Gfaigldrl~~~L~-~--~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~ 1156 (1239)
|.+ ....|++ .+|++ |||+|+|||+.+|. + +..+. ...+.+|+|++.+ +....+|+++|+.
T Consensus 425 d~~~~~~~g~~----------~~p~ii~~Gfa~gieRli~~l~e~~~~~~p~-~~~p~~v~vi~~~-~~~~~~a~~ia~~ 492 (563)
T TIGR00418 425 DLTYVDEDNEE----------KRPVMIHRAILGSIERFIAILLEKYAGNFPL-WLAPVQVVVIPVN-ERHLDYAKKVAQK 492 (563)
T ss_pred CCEEECCCCCE----------EeeEEEEeeccCcHHHHHHHHHHhccCCCCC-cCCCceEEEEEcc-chHHHHHHHHHHH
Confidence 995 5665544 35885 99999999998873 2 22332 2367889999986 6678999999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHH
Q 000880 1157 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1226 (1239)
Q Consensus 1157 Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~ 1226 (1239)
||+.|++|+++.. .+++++++++|++.|++++|++|++|+++|+|+||||.+|+|.+++++++++.+++
T Consensus 493 LR~~Gi~v~~d~~-~~sl~~q~k~A~~~g~~~~iiiG~~E~~~~~v~vk~~~~g~q~~v~~~el~~~i~~ 561 (563)
T TIGR00418 493 LKKAGIRVDVDDR-NERLGKKIREAQKQKIPYMLVVGDKEMESLAVNVRTRKGQKLEKMSLDEFLEKLRK 561 (563)
T ss_pred HHHcCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEchhhhhCCeEEEEECCCCccceeeHHHHHHHHHh
Confidence 9999999998776 67999999999999999999999999999999999999999999999999888764
No 44
>PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=5.9e-40 Score=364.63 Aligned_cols=255 Identities=14% Similarity=0.155 Sum_probs=194.8
Q ss_pred hhhHHHHHHHHHHHHHHHcCCccccccceecc----CCCccccccEEE-EeccCCCeeeecCCCcHHHHHHHHhCCCCce
Q 000880 794 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL----GDCPQFKRNTVK-LLTHGGDLLELSHELRLPFIRWAISNQKSSF 868 (1239)
Q Consensus 794 ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~~~~----~~~~~~~~~~~~-~~D~~G~~l~LRPD~T~~iaR~~~~~~~~P~ 868 (1239)
....++.+++.++++|++|||++|.||+|++. ..++.....+++ |.|.+|+.++||||+|+||||+++++...|.
T Consensus 6 ~~~~~~~ie~~l~~~f~~~GY~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~Gr~laLRpD~T~~iAR~~a~~~~~~~ 85 (272)
T PRK12294 6 QLIALKESETAFLKYFNKADYELVDFSVIEKLDWKQLNHEDLQQMGERSFWQHEHQIYALRNDFTDQLLRYYSMYPTAAT 85 (272)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEeeCCcchhHHhhhccccchhhhheeeeecCCCCEEEEcCCCCHHHHHHHHhcCCCCc
Confidence 45567899999999999999999999999322 224344455555 4466899999999999999999987655677
Q ss_pred eEEeecCeEEcCCCCCCCCceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceE-EEECcHHHHHHHHHHcCCCHH
Q 000880 869 KRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCD-IHLNHGDLLEAIWSWAGIKAE 947 (1239)
Q Consensus 869 r~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~-i~lg~~~i~~~ll~~lgl~~~ 947 (1239)
|+||+|+|||++++ ++|+|||+|| .+..+|+|+|.+|+++++.+|..+ +. |.|||+++++++++. ++
T Consensus 86 Rl~Y~g~VfR~~~~------~~Q~GvEliG-~~~~a~~e~l~la~~~l~~~g~~~-~~~i~lGh~~~~~~l~~~----~~ 153 (272)
T PRK12294 86 KVAYAGLIIRNNEA------AVQVGIENYA-PSLANVQQSFKLFIQFIQQQLRDN-VHFVVLGHYQLLDALLDK----SL 153 (272)
T ss_pred eEEEeccEeccCCC------cceeceEEEC-CCchhHHHHHHHHHHHHHHhCCCC-CcEEEeccHHHHHHHHhC----HH
Confidence 99999999998643 8999999999 447999999999999999998765 53 899999999999984 56
Q ss_pred HHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHH
Q 000880 948 HREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALD 1027 (1239)
Q Consensus 948 ~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~ 1027 (1239)
.+++++++|.+||.. ++ ++++... ..+..++.. ....+++++..+........+.|.
T Consensus 154 ~~~~l~~~l~~Kn~~------------~l-~~~l~~~-------~~l~~~l~~---~~~~~l~~a~~l~~~~~~~~~~L~ 210 (272)
T PRK12294 154 QTPDILSMIEERNLS------------GL-VTYLSTE-------HPIVQILKE---NTQQQLNVLEHYIPNDHPALVELK 210 (272)
T ss_pred HHHHHHHHHHhcCHH------------HH-HHHHhhh-------hhHHHHHHh---chHHHHHHHHHhhhhhHHHHHHHH
Confidence 778899999998832 11 2232211 112233321 124567777765533234444555
Q ss_pred HH--HHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccccchhhhccc
Q 000880 1028 EL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWD 1092 (1239)
Q Consensus 1028 ~l--~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~~~fg~ 1092 (1239)
.+ .+...++. .+.||++++|+++||||+||++|.++.+. +|++|||||+|+++||.
T Consensus 211 ~l~~~l~~~~~~-~i~~Dl~~~r~~~YYTG~vF~~y~~~~~~--------~i~~GGRYD~Ll~~Fg~ 268 (272)
T PRK12294 211 IWERWLHTQGYK-DIHLDITAQPPRSYYTGLFIQCHFAENES--------RVLTGGYYKGSIEGFGL 268 (272)
T ss_pred HHHHHHHhcCCC-eEEEcccccCCCCCcCCeEEEEEECCCCC--------cccCCcCchhHHHhcCC
Confidence 54 55666765 49999999999999999999999987665 69999999999999863
No 45
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-41 Score=387.51 Aligned_cols=253 Identities=24% Similarity=0.430 Sum_probs=213.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
..|....+||+|+.|.||.|+...+++.||||.+.+.... ..+-+++|+.+|+..+|+|||.++..|+.
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv--------- 341 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLV--------- 341 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhcc---------
Confidence 4566678999999999999999999999999999876654 34568999999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|+||||++ |+|.+++.. ..+++.++..++++++.||+|||.+|
T Consensus 342 -------------------------------~deLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~g 389 (550)
T KOG0578|consen 342 -------------------------------GDELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARG 389 (550)
T ss_pred -------------------------------cceeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcc
Confidence 357899999996 588777765 34999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+|||||.+|||++.+|.+||+|||||..+..... ...+.+|||.|||||++.. ..|++++|||
T Consensus 390 IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~---------------KR~TmVGTPYWMAPEVvtr-k~YG~KVDIW 453 (550)
T KOG0578|consen 390 IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS---------------KRSTMVGTPYWMAPEVVTR-KPYGPKVDIW 453 (550)
T ss_pred eeeeccccceeEeccCCcEEEeeeeeeeccccccC---------------ccccccCCCCccchhhhhh-cccCccccch
Confidence 99999999999999999999999999998754331 2356799999999999998 6799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
||||+++||+- ||....+......+..........+...++.+++|+.+||+.||.+|++|.++|+|||++..
T Consensus 454 SLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 454 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred hhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 99999999994 77755554444444332222334556778899999999999999999999999999998544
No 46
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.3e-41 Score=365.91 Aligned_cols=251 Identities=28% Similarity=0.462 Sum_probs=217.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
..+|++.+.||+|.||+|-+|+....|+.||||.|++... +..+.-.+.+|+++|+.|+||||+.+|.+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF--------- 122 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF--------- 122 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh---------
Confidence 4679999999999999999999988999999999986543 444556789999999999999999999887
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
.+...+.|||||.. |.|++++.+++.+++.+++.|++||++|+.|+|.
T Consensus 123 -------------------------------ENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHk 171 (668)
T KOG0611|consen 123 -------------------------------ENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHK 171 (668)
T ss_pred -------------------------------cCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh
Confidence 24578899999995 7999999999999999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
++++|||||.+|||+|.++++||+|||++..+..... .+++||+|.|.+||+++|.++-++.+|
T Consensus 172 nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf----------------LqTFCGSPLYASPEIvNG~PY~GPEVD 235 (668)
T KOG0611|consen 172 NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF----------------LQTFCGSPLYASPEIVNGTPYKGPEVD 235 (668)
T ss_pred ccceecccchhheeecCCCCeeeeccchhhhhccccH----------------HHHhcCCcccCCccccCCCCCCCCccc
Confidence 9999999999999999999999999999987653321 256899999999999999887789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
.|||||+||-|++ ||.+.+....+.++-+....-|+. +.++.-||++||-.||++|.|+++|..|=|..
T Consensus 236 sWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~----PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 236 SWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET----PSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred hhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC----CchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 9999999999985 998877666655554433333432 34788899999999999999999999996643
No 47
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-41 Score=352.93 Aligned_cols=259 Identities=25% Similarity=0.443 Sum_probs=221.1
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC--C----chhHHHHHHHHHHHHhc-CCCceeeeeeeeee
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--S----LPVNDRILREVATLSRL-QHQHVVRYYQAWFE 494 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~--~----~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e 494 (1239)
+.+.|+..+.||+|..+.|.+|.++.+|+.+|+|+|..... + .+..+.-.+|+.+|+++ .||||+.+.+.|.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye- 93 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE- 93 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc-
Confidence 34667777899999999999999999999999999975432 1 12334566899999999 6999999998872
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHH
Q 000880 495 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVE 573 (1239)
Q Consensus 495 ~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~ 573 (1239)
....+|+|+|.|+ |.|.++|.+.-.+++..++++++|+..
T Consensus 94 ---------------------------------------s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfe 134 (411)
T KOG0599|consen 94 ---------------------------------------SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFE 134 (411)
T ss_pred ---------------------------------------CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHH
Confidence 2457799999997 799999999999999999999999999
Q ss_pred HHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--
Q 000880 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-- 651 (1239)
Q Consensus 574 gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 651 (1239)
|++|||.++||||||||+|||++++.++||+|||+|+.+..... .+..||||+|+|||.+..
T Consensus 135 gVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Gek----------------LrelCGTPgYLAPEtikC~m 198 (411)
T KOG0599|consen 135 GVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEK----------------LRELCGTPGYLAPETIKCSM 198 (411)
T ss_pred HHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchh----------------HHHhcCCCcccChhheeeec
Confidence 99999999999999999999999999999999999998754431 245699999999998753
Q ss_pred ---CCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 000880 652 ---WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSAT 724 (1239)
Q Consensus 652 ---~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 724 (1239)
.+.|+..+|+||+|||||-|+. ||+....+.....+...+..+ .|.|.+.+.+.++||.+||+.||.+|.|++
T Consensus 199 ~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritak 278 (411)
T KOG0599|consen 199 YENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAK 278 (411)
T ss_pred ccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHH
Confidence 4569999999999999999984 887766655555555555553 578999999999999999999999999999
Q ss_pred HHHhccCCCCch
Q 000880 725 ELLQDALPPQME 736 (1239)
Q Consensus 725 eiL~~~~~~~~~ 736 (1239)
++|+||||.++.
T Consensus 279 e~LaHpff~q~~ 290 (411)
T KOG0599|consen 279 EALAHPFFIQIA 290 (411)
T ss_pred HHhcChHHHHHH
Confidence 999999997764
No 48
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9.9e-40 Score=373.53 Aligned_cols=254 Identities=26% Similarity=0.442 Sum_probs=213.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||+|+||.||+|.++.+|+.||||++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 71 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH--------- 71 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc---------
Confidence 478999999999999999999999999999999975432 2234566889999999999999999987652
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
+...+|+||||++ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 120 (291)
T cd05612 72 -------------------------------DQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK 120 (291)
T ss_pred -------------------------------cCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 69999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Di 181 (291)
T cd05612 121 EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------TWTLCGTPEYLAPEVIQS-KGHNKAVDW 181 (291)
T ss_pred CeeecCCCHHHeEECCCCCEEEEecCcchhccCC------------------cccccCChhhcCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999764211 123579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 733 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~ 733 (1239)
|||||++|+|++ ||...........+......+|. ..++.+++||++||+.||.+||+ +.++++|+|+.
T Consensus 182 wSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 182 WALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR---HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc---cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 999999999997 88766655555444443333433 33678999999999999999995 99999999999
Q ss_pred CchHHH
Q 000880 734 QMEYEL 739 (1239)
Q Consensus 734 ~~~~~~ 739 (1239)
...+..
T Consensus 259 ~~~~~~ 264 (291)
T cd05612 259 SVDWDD 264 (291)
T ss_pred CCCHHH
Confidence 877653
No 49
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=9.1e-40 Score=380.66 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=216.0
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
...+++|++.+.||+|+||.||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 89 (329)
T PTZ00263 14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD---- 89 (329)
T ss_pred CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc----
Confidence 3446899999999999999999999999999999999975432 22334678899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
...+|++||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 90 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 133 (329)
T PTZ00263 90 ------------------------------------ENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEY 133 (329)
T ss_pred ------------------------------------CCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988889999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.
T Consensus 134 LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~ 194 (329)
T PTZ00263 134 LHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR------------------TFTLCGTPEYLAPEVIQS-KGHGK 194 (329)
T ss_pred HHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC------------------cceecCChhhcCHHHHcC-CCCCC
Confidence 99999999999999999999999999999999754211 123579999999999987 56899
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 729 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 729 (1239)
++|||||||++|||++ ||...........+......+|. ..++.+++||++||+.||.+||+ +.+++.|
T Consensus 195 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 195 AVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN---WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred cceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 9999999999999997 88766554444444332222332 34568999999999999999997 7999999
Q ss_pred cCCCCchHHHH
Q 000880 730 ALPPQMEYELL 740 (1239)
Q Consensus 730 ~~~~~~~~~~~ 740 (1239)
|||....+..+
T Consensus 272 p~f~~~~~~~~ 282 (329)
T PTZ00263 272 PYFHGANWDKL 282 (329)
T ss_pred CccCCCCHHHH
Confidence 99998766543
No 50
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.6e-39 Score=368.27 Aligned_cols=254 Identities=24% Similarity=0.392 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+++|++.++||.|+||.||+|+++.+++.||+|+++..... .....+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 74 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHT-------- 74 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcC--------
Confidence 57899999999999999999999999999999999754322 233467899999999999999999988632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||++++|.+++.... .+++..+..++.||+.||+|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 122 (288)
T cd07871 75 --------------------------------ERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR 122 (288)
T ss_pred --------------------------------CCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 35689999999999999887554 478999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 123 ~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 187 (288)
T cd07871 123 KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDM 187 (288)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC---------------ccccCceecccccChHHhcCCcccCcHHHH
Confidence 99999999999999999999999999997532111 012335789999999998765668999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-------------------CCC--------ccccCCHHHHHHHHH
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP--------SWVAKFSEQESLLRR 711 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-------------------~p~--------~~~~~~~e~~~LI~~ 711 (1239)
||+||++|||++ ||......+.........+. +|. .....++++.+||++
T Consensus 188 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 267 (288)
T cd07871 188 WGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSS 267 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHH
Confidence 999999999997 67654433332222111100 000 112345688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCC
Q 000880 712 LMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~ 732 (1239)
||+.||.+|||+.++++||||
T Consensus 268 mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 268 LLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hcCcCcccCCCHHHHhcCCCC
Confidence 999999999999999999997
No 51
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.9e-39 Score=375.80 Aligned_cols=265 Identities=28% Similarity=0.418 Sum_probs=208.5
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.++||+|+||.||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------- 72 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-------- 72 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccC--------
Confidence 488999999999999999999999999999998754333344567889999999999999999998874321
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
......+|+|||||+++|.+++.....+++..++.++.||+.||.|||++||+
T Consensus 73 ---------------------------~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 73 ---------------------------RREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred ---------------------------CCCCceEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 01234689999999999999998888899999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCcchhhHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 663 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwS 663 (1239)
||||||+|||++.++.+||+|||+++....... ........+||+.|+|||++.+. ..++.++||||
T Consensus 126 H~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwS 193 (338)
T cd07859 126 HRDLKPKNILANADCKLKICDFGLARVAFNDTP------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 193 (338)
T ss_pred cCCCCHHHeEECCCCcEEEccCccccccccccC------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHH
Confidence 999999999999999999999999975421110 00112346799999999998652 45899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHH--------------------------HHhhhhcCC--CCCccccCCHHHHHHHHHc
Q 000880 664 LGIVFFELWH---PFSTAMERQIV--------------------------LSDLKQKGE--LPPSWVAKFSEQESLLRRL 712 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~--------------------------~~~~~~~~~--~p~~~~~~~~e~~~LI~~~ 712 (1239)
|||++|||++ ||......... ...+..... ....++..++.+.++|.+|
T Consensus 194 lGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 273 (338)
T cd07859 194 IGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERL 273 (338)
T ss_pred HHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHH
Confidence 9999999997 66443221110 000000000 1112234567889999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 000880 713 MSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|+.||++|||+.++++||||.+..
T Consensus 274 l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 274 LAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred cCcCcccCCCHHHHhcCchhhhcC
Confidence 999999999999999999998764
No 52
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4e-39 Score=370.47 Aligned_cols=259 Identities=26% Similarity=0.413 Sum_probs=205.8
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||+|+||.||+|+++.+|+.||||+++..... .....+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 74 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHT-------- 74 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEec--------
Confidence 36899999999999999999999999999999998754322 223467889999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+|||||+++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 122 (303)
T cd07869 75 --------------------------------KETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR 122 (303)
T ss_pred --------------------------------CCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3578999999999998888654 5689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++||
T Consensus 123 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 187 (303)
T cd07869 123 YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS---------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDM 187 (303)
T ss_pred CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC---------------ccCCCCcccCCCCChHHHcCCCCCCcHHHH
Confidence 99999999999999999999999999987532111 112345789999999998775668999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhc-CC-----------------------CCCcc------ccCCHHHHHH
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GE-----------------------LPPSW------VAKFSEQESL 708 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~-~~-----------------------~p~~~------~~~~~e~~~L 708 (1239)
|||||++|||++ ||....+.......+... +. .+..+ ...++++.+|
T Consensus 188 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 267 (303)
T cd07869 188 WGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDL 267 (303)
T ss_pred HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHH
Confidence 999999999997 776543322211111000 00 00000 0123578899
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCchH
Q 000880 709 LRRLMSPSPSDRPSATELLQDALPPQMEY 737 (1239)
Q Consensus 709 I~~~L~~dP~~RPta~eiL~~~~~~~~~~ 737 (1239)
|.+||+.||.+|||+.++++||||.....
T Consensus 268 i~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 268 ASKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred HHHHhccCchhccCHHHHhcCcccccCCh
Confidence 99999999999999999999999998764
No 53
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-41 Score=376.28 Aligned_cols=252 Identities=28% Similarity=0.462 Sum_probs=213.5
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
.|..++.||+|.||.||+|.+..+++.||||++.+.... ...+++.+|+.+|..++||||.++|++++.
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~---------- 82 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLK---------- 82 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheee----------
Confidence 466678999999999999999999999999999876543 456789999999999999999999998843
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
...++|+||||+ |++.+++.....+++..+..++++++.||.|||+++.
T Consensus 83 ------------------------------g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~k 132 (467)
T KOG0201|consen 83 ------------------------------GTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKK 132 (467)
T ss_pred ------------------------------cccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcce
Confidence 456799999996 6999999988888999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+|||||+.|||+..+|.+||+|||.+.++.... ....+++|||.|||||++++ ..|+.|+||||
T Consensus 133 iHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~---------------~rr~tfvGTPfwMAPEVI~~-~~Y~~KADIWS 196 (467)
T KOG0201|consen 133 IHRDIKAANILLSESGDVKLADFGVAGQLTNTV---------------KRRKTFVGTPFWMAPEVIKQ-SGYDTKADIWS 196 (467)
T ss_pred ecccccccceeEeccCcEEEEecceeeeeechh---------------hccccccccccccchhhhcc-ccccchhhhhh
Confidence 999999999999999999999999998764321 12266899999999999996 67999999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccc-cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~-~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|||+++||.+ |+....++....-+ ....||... ..++.+++||..||++||+.||+|.++|+|.|.+...
T Consensus 197 LGITaiEla~GePP~s~~hPmrvlflI---pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 197 LGITAIELAKGEPPHSKLHPMRVLFLI---PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred hhHHHHHHhcCCCCCcccCcceEEEec---cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 9999999997 77666654332222 222344333 4556799999999999999999999999999887754
No 54
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-39 Score=359.08 Aligned_cols=266 Identities=30% Similarity=0.503 Sum_probs=214.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCc-eeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH-VVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn-Iv~l~~~~~e~~~~~~~ 501 (1239)
+..|..+++||+|+||+||+|+.+.+|+.||+|+++........-....+|+.+|+.|+|+| ||++++.+....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~----- 84 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSN----- 84 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecc-----
Confidence 56788889999999999999999999999999999876554334556889999999999999 999999875421
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD----HFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~----~l~~~~~~~i~~qI~~gL~y 577 (1239)
.......+++|+||+..+|..++.... .++...++.+++||+.||+|
T Consensus 85 -----------------------------~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~ 135 (323)
T KOG0594|consen 85 -----------------------------NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF 135 (323)
T ss_pred -----------------------------cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence 012345789999999999999998765 58888999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||+++|+||||||+||||+.+|.+||+|||+|+...-+. ...++.++|.+|.|||++.|...|+.
T Consensus 136 ~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~---------------~~yt~evvTlWYRaPEvLlGs~~Ys~ 200 (323)
T KOG0594|consen 136 LHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM---------------RTYTPEVVTLWYRAPEVLLGSTSYST 200 (323)
T ss_pred HHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCc---------------ccccccEEEeeccCHHHhcCCCcCCC
Confidence 999999999999999999999999999999999654221 11356789999999999999778999
Q ss_pred chhhHHHHHHHHHhhc--C-CchhHHHHHHHHhhhhcCCC-CCcc--------------------------ccCCHHHHH
Q 000880 658 KADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGEL-PPSW--------------------------VAKFSEQES 707 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt--P-f~~~~~~~~~~~~~~~~~~~-p~~~--------------------------~~~~~e~~~ 707 (1239)
..||||+|||++||++ | |.+.++......+...-+.. ...| +...++..+
T Consensus 201 ~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~d 280 (323)
T KOG0594|consen 201 SVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIE 280 (323)
T ss_pred CcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHH
Confidence 9999999999999997 4 44444444333332211110 0011 112246789
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 000880 708 LLRRLMSPSPSDRPSATELLQDALPPQMEY 737 (1239)
Q Consensus 708 LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 737 (1239)
++.+||+.+|.+|.|++.+|.|++|.....
T Consensus 281 ll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 281 LLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred HHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 999999999999999999999999987753
No 55
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6.2e-39 Score=365.30 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=202.8
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||+|+||.||+|+++.+++.||||++............+.+|+.+++.++||||++++++|..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 71 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR--------- 71 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec---------
Confidence 47999999999999999999999999999999998654444455678899999999999999999987732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~-~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|+||||+++++.+.+. ....+++..++.++.||+.||.|||++|
T Consensus 72 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 120 (287)
T cd07848 72 -------------------------------RGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND 120 (287)
T ss_pred -------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 35789999999876555554 4457999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+|||++.++.+||+|||++....... ........||+.|+|||++.+ ..++.++|||
T Consensus 121 i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diw 185 (287)
T cd07848 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--------------NANYTEYVATRWYRSPELLLG-APYGKAVDMW 185 (287)
T ss_pred eecCCCCHHHEEEcCCCcEEEeeccCcccccccc--------------cccccccccccccCCcHHHcC-CCCCCchhHH
Confidence 9999999999999999999999999998643211 001233579999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC-------------------CC----------ccccCCHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-------------------PP----------SWVAKFSEQESLLR 710 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~-------------------p~----------~~~~~~~e~~~LI~ 710 (1239)
||||++|||++ ||................+.. |. .....++++.+||+
T Consensus 186 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~ 265 (287)
T cd07848 186 SVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMK 265 (287)
T ss_pred hHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHH
Confidence 99999999996 776544333222211111111 00 01124567899999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 000880 711 RLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+||+.||++|||++++++||||
T Consensus 266 ~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 266 NLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHccCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999997
No 56
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.4e-40 Score=376.89 Aligned_cols=254 Identities=33% Similarity=0.548 Sum_probs=222.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+++|+.++++|+|+||.+++++++.+++.||+|.|.....+....+...+|+.++++++|||||.|++.|++.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~------- 75 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED------- 75 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-------
Confidence 5789999999999999999999999999999999998888777777899999999999999999999998653
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
..+++|||+||+ |++.+.+.+.. .|+++.++.++.||+.|+.|||
T Consensus 76 --------------------------------~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH 123 (426)
T KOG0589|consen 76 --------------------------------GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH 123 (426)
T ss_pred --------------------------------CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 456899999996 58999887544 5999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+++|+|||||+.|||++.++.|||+|||+|+.+..... ...+.+|||.||.||++.+ -.|+.|+
T Consensus 124 ~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~---------------~a~tvvGTp~YmcPEil~d-~pYn~KS 187 (426)
T KOG0589|consen 124 ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS---------------LASTVVGTPYYMCPEILSD-IPYNEKS 187 (426)
T ss_pred hhhhhcccchhhhhhccccCceeecchhhhhhcCCchh---------------hhheecCCCcccCHHHhCC-CCCCccC
Confidence 99999999999999999999999999999998754420 1256799999999999999 5699999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
|||||||++|||++ +|...+......++.... ..|.....+.+++.+|+.||..+|..||++.++|.+|...
T Consensus 188 DiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~--~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 188 DIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL--YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred cchhhcchHHHHHhcccccCccchHHHHHHHhhcc--CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 99999999999996 787777666666666543 4555556677999999999999999999999999986443
No 57
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.9e-39 Score=374.30 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=208.3
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
+.||+|+||.||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------------- 66 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-------------- 66 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc--------------
Confidence 369999999999999999999999999975432 22334568899999999999999999987732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD 120 (323)
T cd05571 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120 (323)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 457899999996 58999998888899999999999999999999999999999
Q ss_pred CCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHH
Q 000880 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 667 (1239)
Q Consensus 588 LKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 667 (1239)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i 184 (323)
T cd05571 121 LKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEECCCCCEEEeeCCCCcccccCC---------------CcccceecCccccChhhhcC-CCCCccccCcccchh
Confidence 99999999999999999999987431110 11234579999999999987 568999999999999
Q ss_pred HHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHHH
Q 000880 668 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 739 (1239)
Q Consensus 668 L~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 739 (1239)
+|||++ ||...........+......+| ...++++.+||++||+.||++|| ++.++++|+||....+..
T Consensus 185 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~ 261 (323)
T cd05571 185 MYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQD 261 (323)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999997 7866555444444333333333 34567999999999999999999 899999999999987653
No 58
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=401.69 Aligned_cols=279 Identities=24% Similarity=0.418 Sum_probs=234.4
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.+||+++++||+|+||.|.+++++.+++.||+|++++-... .....-|..|-.+|..-+.+.|+.++.+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF--------- 144 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF--------- 144 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh---------
Confidence 37999999999999999999999999999999999753322 22334688899999999999999999887
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
++..++|+||||++ |+|..++.+.+++++..|++|+..|+.||.-||+
T Consensus 145 -------------------------------QD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~ 193 (1317)
T KOG0612|consen 145 -------------------------------QDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHS 193 (1317)
T ss_pred -------------------------------cCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999996 6999999999999999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 656 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 656 (1239)
.|+|||||||+|||||..||+||+|||.|-.+.... .......+|||.|.|||+|+. .+.|+
T Consensus 194 mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG--------------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG 259 (1317)
T KOG0612|consen 194 MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG--------------TVRSSVAVGTPDYISPEVLQSQGDGKGEYG 259 (1317)
T ss_pred ccceeccCCcceeEecccCcEeeccchhHHhcCCCC--------------cEEeccccCCCCccCHHHHHhhcCCccccC
Confidence 999999999999999999999999999988764322 122355699999999999863 25699
Q ss_pred cchhhHHHHHHHHHhh---cCCchhHHHHHHHHhhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCC---HHHHHh
Q 000880 657 EKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQ 728 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELl---tPf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt---a~eiL~ 728 (1239)
+.+||||+||++|||+ |||+...-.+.+-+++.. ...+| ....+++++++||.++++ +|..|.. ++++-.
T Consensus 260 ~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 260 RECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred CccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 9999999999999999 599988887777777765 34466 344588999999999887 4788887 999999
Q ss_pred ccCCCCchHHHHHH----HHHhcCCCCCCcchh
Q 000880 729 DALPPQMEYELLDN----ILRMMHSSEDTSIYD 757 (1239)
Q Consensus 729 ~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~ 757 (1239)
||||.+..|..+.. +.+.+.++.|++.++
T Consensus 338 HpFF~g~~W~~iR~~~pP~vPevssd~DTsnFd 370 (1317)
T KOG0612|consen 338 HPFFEGIDWDNIRESVPPVVPEVSSDDDTSNFD 370 (1317)
T ss_pred CccccCCChhhhhhcCCCCCCcCCCCCcccccc
Confidence 99999999976654 344555666666663
No 59
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.6e-39 Score=375.04 Aligned_cols=258 Identities=24% Similarity=0.373 Sum_probs=214.9
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCC-cEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
....++|++.+.||+|+||.||+|.++.++ ..||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--- 102 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD--- 102 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe---
Confidence 345689999999999999999999987655 6899999875432 22345678899999999999999999998733
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||.
T Consensus 103 -------------------------------------~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~ 145 (340)
T PTZ00426 103 -------------------------------------ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFE 145 (340)
T ss_pred -------------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 357899999995 699999998889999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||++||+||||||+|||++.++++||+|||+++..... ....+||+.|||||++.+ ..++
T Consensus 146 ~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~ 206 (340)
T PTZ00426 146 YLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR------------------TYTLCGTPEYIAPEILLN-VGHG 206 (340)
T ss_pred HHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC------------------cceecCChhhcCHHHHhC-CCCC
Confidence 999999999999999999999999999999999754211 134579999999999987 5689
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHh
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQ 728 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~ 728 (1239)
.++|||||||++|||++ ||...........+......+|+ ..++.+.++|++||+.||.+|+ +++++++
T Consensus 207 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 207 KAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK---FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 99999999999999997 78766554444444433333443 3456899999999999999995 8999999
Q ss_pred ccCCCCchHHH
Q 000880 729 DALPPQMEYEL 739 (1239)
Q Consensus 729 ~~~~~~~~~~~ 739 (1239)
||||.+..+..
T Consensus 284 hp~f~~~~~~~ 294 (340)
T PTZ00426 284 HPWFGNIDWVS 294 (340)
T ss_pred CCCcCCCCHHH
Confidence 99999987653
No 60
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-40 Score=340.88 Aligned_cols=254 Identities=28% Similarity=0.456 Sum_probs=221.6
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
.-+++|++.+.||+|-||.||+|+.+.++-.||+|++.++.. ......++.+|+++-+.|+||||+++|++|.+
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd----- 93 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD----- 93 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec-----
Confidence 347899999999999999999999999999999999976542 22345689999999999999999999999854
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE--SYDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~--~~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
...+|+++||.+ |++...|. ...++++..++.|+.|++.||.
T Consensus 94 -----------------------------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~ 138 (281)
T KOG0580|consen 94 -----------------------------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALL 138 (281)
T ss_pred -----------------------------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHH
Confidence 467899999996 79999998 5677999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|+|.+++|||||||+|+|++..+.+||+|||.+.... +...++.|||..|.|||...+ ..++
T Consensus 139 y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-----------------~~kR~tlcgt~dyl~pEmv~~-~~hd 200 (281)
T KOG0580|consen 139 YCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------SNKRKTLCGTLDYLPPEMVEG-RGHD 200 (281)
T ss_pred HhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-----------------CCCceeeecccccCCHhhcCC-CCcc
Confidence 9999999999999999999999999999999987532 122467899999999999998 5789
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
..+|+|++|++.||++. ||...+..+...++......+| ...+.+++++|.+|+.++|.+|.+..+++.|||..
T Consensus 201 ~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 201 KFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP---STISGGAADLISRLLVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred chhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC---cccChhHHHHHHHHhccCccccccHHHHhhhHHHH
Confidence 99999999999999985 8988887777666666555566 45567999999999999999999999999999975
Q ss_pred Cc
Q 000880 734 QM 735 (1239)
Q Consensus 734 ~~ 735 (1239)
..
T Consensus 278 a~ 279 (281)
T KOG0580|consen 278 AN 279 (281)
T ss_pred hc
Confidence 43
No 61
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.7e-38 Score=375.07 Aligned_cols=275 Identities=26% Similarity=0.425 Sum_probs=214.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|+.++..++||||++++++|.+
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-------- 72 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-------- 72 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec--------
Confidence 479999999999999999999999999999999975332 22334568889999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (363)
T cd05628 73 --------------------------------KLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL 120 (363)
T ss_pred --------------------------------CCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999996 59999998888999999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccC-----CCCCCCC------C---------CccccCcccccCc
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-----AAFPTDT------G---------GVSVDGTGQVGTY 641 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~-----~~~~~~~------~---------~~~~~~~~~~GT~ 641 (1239)
||+||||||+|||++.++++||+|||+++.+........ ...+.+. . .......+.+||+
T Consensus 121 givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~ 200 (363)
T cd05628 121 GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTP 200 (363)
T ss_pred CeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCc
Confidence 999999999999999999999999999986532110000 0000000 0 0000123468999
Q ss_pred cCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhh--cCCCCCccccCCHHHHHHHHHccCCC
Q 000880 642 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPS 716 (1239)
Q Consensus 642 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~e~~~LI~~~L~~d 716 (1239)
.|+|||++.+ ..++.++|||||||++|||++ ||......+....+... ...+|+ ....+++++++|.+|+. +
T Consensus 201 ~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~ 277 (363)
T cd05628 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-E 277 (363)
T ss_pred cccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-C
Confidence 9999999987 568999999999999999996 88766555554444332 222333 23457799999999775 4
Q ss_pred CC---CCCCHHHHHhccCCCCchHHHHH
Q 000880 717 PS---DRPSATELLQDALPPQMEYELLD 741 (1239)
Q Consensus 717 P~---~RPta~eiL~~~~~~~~~~~~~~ 741 (1239)
|. .||++++|++||||....+..+.
T Consensus 278 ~~~r~~r~~~~ei~~hp~f~~~~~~~~~ 305 (363)
T cd05628 278 WEHRIGAPGVEEIKTNPFFEGVDWEHIR 305 (363)
T ss_pred hhhcCCCCCHHHHhCCCCCCCCCHHHHH
Confidence 44 56899999999999999877553
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.5e-38 Score=370.94 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=213.5
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++++.||+|+||.||+|++..+|+.||||+++.... .......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-------- 72 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-------- 72 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc--------
Confidence 479999999999999999999999999999999975422 22334578899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
..++|+|||||+ ++|.+++.....+++..++.++.||+.||.|||++
T Consensus 73 --------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 120 (333)
T cd05600 73 --------------------------------DEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL 120 (333)
T ss_pred --------------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999996 69999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||++..... .....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv 181 (333)
T cd05600 121 GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------------------YANSVVGSPDYMAPEVLRG-KGYDFTVDY 181 (333)
T ss_pred CccccCCCHHHEEECCCCCEEEEeCcCCccccc------------------ccCCcccCccccChhHhcC-CCCCCccce
Confidence 999999999999999999999999999975421 1234579999999999988 579999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhc--CCCCCc---cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~--~~~p~~---~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
|||||++|||++ ||......+......... ...|.. ....++++.+||.+||..+|.+||++.++++|+||.
T Consensus 182 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred ecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence 999999999996 776555444333222211 111211 124567899999999999999999999999999999
Q ss_pred CchHHHH
Q 000880 734 QMEYELL 740 (1239)
Q Consensus 734 ~~~~~~~ 740 (1239)
...+...
T Consensus 262 ~~~~~~~ 268 (333)
T cd05600 262 EVDWNEL 268 (333)
T ss_pred CCCHHHH
Confidence 8876544
No 63
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-39 Score=371.27 Aligned_cols=243 Identities=29% Similarity=0.459 Sum_probs=199.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
..+.+++.||+|.||+||+|.|. ....||+|.++....+ .+.|.+|+.+|++|+|+|||+++++|..
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~--------- 272 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTK--------- 272 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEec---------
Confidence 45677889999999999999997 3348999999855333 4678899999999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|||||||+ |+|.++|.. ...+...+.+.++.|||+||+||++
T Consensus 273 -------------------------------~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes 321 (468)
T KOG0197|consen 273 -------------------------------QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES 321 (468)
T ss_pred -------------------------------CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh
Confidence 235899999996 899999986 4569999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+++|||||..+|||++++..+||+|||+|+......... ..+..-..-|.|||++.. ..++.|||
T Consensus 322 ~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~--------------~~~~kfPIkWtAPEa~~~-~~FS~kSD 386 (468)
T KOG0197|consen 322 KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA--------------SEGGKFPIKWTAPEALNY-GKFSSKSD 386 (468)
T ss_pred CCccchhhhhhheeeccCceEEEcccccccccCCCceee--------------cCCCCCCceecCHHHHhh-CCcccccc
Confidence 999999999999999999999999999999543332110 111223457999999987 67999999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 000880 661 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 727 (1239)
Q Consensus 661 IwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 727 (1239)
||||||+||||+| |+......+. +..+. .+...+.+..+++++.++|..||..+|++|||++.+.
T Consensus 387 VWSFGVlL~E~fT~G~~py~~msn~ev-~~~le-~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 387 VWSFGVLLWELFTYGRVPYPGMSNEEV-LELLE-RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred eeehhhhHHHHhccCCCCCCCCCHHHH-HHHHh-ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 9999999999997 6555544444 44444 3444445567889999999999999999999999665
No 64
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.2e-38 Score=375.18 Aligned_cols=273 Identities=24% Similarity=0.397 Sum_probs=212.2
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--------- 72 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--------- 72 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec---------
Confidence 68999999999999999999999999999999975432 22345678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
..++|+|||||+ |+|.+++.....+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 599999988888999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccC----CCCCCC----------------------------CCCc
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD----AAFPTD----------------------------TGGV 630 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~----~~~~~~----------------------------~~~~ 630 (1239)
|+||||||+||||+.++++||+|||+++.+........ ...... ....
T Consensus 122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (381)
T cd05626 122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQ 201 (381)
T ss_pred eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccc
Confidence 99999999999999999999999999864321100000 000000 0000
Q ss_pred cccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-CCCccccCCHHHH
Q 000880 631 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQE 706 (1239)
Q Consensus 631 ~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~e~~ 706 (1239)
.....+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+...... ..+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 280 (381)
T cd05626 202 RCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAV 280 (381)
T ss_pred ccccccccCCccccCHHHHcC-CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHH
Confidence 001234689999999999987 568999999999999999997 88766555444444322211 1223345678999
Q ss_pred HHHHHcc--CCCCCCCCCHHHHHhccCCCCchHH
Q 000880 707 SLLRRLM--SPSPSDRPSATELLQDALPPQMEYE 738 (1239)
Q Consensus 707 ~LI~~~L--~~dP~~RPta~eiL~~~~~~~~~~~ 738 (1239)
+||.+|+ ..+|..||++.++++|+||.+..+.
T Consensus 281 dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~ 314 (381)
T cd05626 281 DLITKLCCSAEERLGRNGADDIKAHPFFSEVDFS 314 (381)
T ss_pred HHHHHHccCcccccCCCCHHHHhcCcccCCCChh
Confidence 9999955 4555669999999999999987654
No 65
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.6e-38 Score=372.92 Aligned_cols=275 Identities=29% Similarity=0.461 Sum_probs=218.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||+|+||+||+|++..+|+.||||+++..... ......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ--------- 71 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee---------
Confidence 4799999999999999999999999999999999754322 234567889999999999999999997763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 120 (350)
T cd05573 72 -------------------------------DEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL 120 (350)
T ss_pred -------------------------------cCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 69999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCC--------------CCCCCCCccccCcccccCccCCCcc
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--------------FPTDTGGVSVDGTGQVGTYFYTAPE 647 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~GT~~Y~APE 647 (1239)
||+||||||+|||++.++.+||+|||++............. ................||+.|+|||
T Consensus 121 giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 200 (350)
T cd05573 121 GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPE 200 (350)
T ss_pred CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHH
Confidence 99999999999999999999999999998654322000000 0000000011223457999999999
Q ss_pred cccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhh--hcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 000880 648 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK--QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 722 (1239)
Q Consensus 648 ~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~--~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 722 (1239)
++.+ ..++.++|||||||++|||++ ||...........+.. ....+|. ....++++.+||.+||. ||.+||+
T Consensus 201 ~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~~~~~~li~~ll~-dp~~R~~ 277 (350)
T cd05573 201 VLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP-DPPVSPEAIDLICRLLC-DPEDRLG 277 (350)
T ss_pred HHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCC-CCCCCHHHHHHHHHHcc-ChhhcCC
Confidence 9988 578999999999999999997 7876655544444333 2222333 23367899999999997 9999999
Q ss_pred -HHHHHhccCCCCchHHHHH
Q 000880 723 -ATELLQDALPPQMEYELLD 741 (1239)
Q Consensus 723 -a~eiL~~~~~~~~~~~~~~ 741 (1239)
+.++++|||+....+....
T Consensus 278 s~~~ll~hp~~~~~~~~~~~ 297 (350)
T cd05573 278 SFEEIKSHPFFKGIDWENLR 297 (350)
T ss_pred CHHHHhcCCCcCCCCHHHHh
Confidence 9999999999998776443
No 66
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=368.67 Aligned_cols=258 Identities=30% Similarity=0.512 Sum_probs=223.8
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCc
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 497 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~ 497 (1239)
......|++.+.||+|.||.||+|+++.+|+.||+|+|++.... ......+.+|+.+|+.+. |||||.++++|..
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~--- 107 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED--- 107 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc---
Confidence 34456899999999999999999999999999999999865532 234568999999999998 9999999998832
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
...+|+|||+|. |.|.+.+... .+++..+..++.||+.|++
T Consensus 108 -------------------------------------~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~ 149 (382)
T KOG0032|consen 108 -------------------------------------PDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVK 149 (382)
T ss_pred -------------------------------------CCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHH
Confidence 457899999996 6899888766 5999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCC----CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 652 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 652 (1239)
|||+.||+||||||+|+|+... +.+|++|||+|....... .....+|||.|+|||++..
T Consensus 150 ~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~----------------~~~~~~Gtp~y~APEvl~~- 212 (382)
T KOG0032|consen 150 YLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE----------------RLHTIVGTPEYVAPEVLGG- 212 (382)
T ss_pred HHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc----------------eEeeecCCccccCchhhcC-
Confidence 9999999999999999999754 479999999999865311 2356799999999999997
Q ss_pred CCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 653 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 653 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
..|+..+||||+||++|.|++ ||...........+......++ +.|...+..++++|++||..||.+|+|+.++|+
T Consensus 213 ~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 213 RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 569999999999999999985 9998888888877777666554 578888899999999999999999999999999
Q ss_pred ccCCCCc
Q 000880 729 DALPPQM 735 (1239)
Q Consensus 729 ~~~~~~~ 735 (1239)
|||....
T Consensus 293 HpWi~~~ 299 (382)
T KOG0032|consen 293 HPWIKSI 299 (382)
T ss_pred CccccCC
Confidence 9997765
No 67
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.4e-38 Score=359.67 Aligned_cols=258 Identities=27% Similarity=0.424 Sum_probs=206.8
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.|+..+.||+|+||+||+|.++.+|+.||||++...... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--------- 71 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc---------
Confidence 378889999999999999999999999999998754322 2223467899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...++++||||+ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05631 72 -------------------------------KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR 120 (285)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999996 5888777543 358999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+||+||||||+|||++.++.+||+|||++....... .....+||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05631 121 ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE----------------TVRGRVGTVGYMAPEVINN-EKYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----------------eecCCCCCCCccCHhhhcC-CCCCcccC
Confidence 999999999999999999999999999997542111 1134579999999999987 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHH---HHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 000880 661 MYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 729 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~---~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 729 (1239)
||||||++|||++ ||...... ......+. . .........++++.+||++||+.||.+||+ ++++++|
T Consensus 184 vwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 184 WWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK-E-DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred chhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh-c-ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 9999999999996 77654322 11111111 1 111222345678999999999999999997 9999999
Q ss_pred cCCCCchHHHHH
Q 000880 730 ALPPQMEYELLD 741 (1239)
Q Consensus 730 ~~~~~~~~~~~~ 741 (1239)
|||.+..+..+.
T Consensus 262 ~~~~~~~~~~~~ 273 (285)
T cd05631 262 PIFKNINFKRLE 273 (285)
T ss_pred HhhcCCCHHHHH
Confidence 999998876554
No 68
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.3e-38 Score=372.60 Aligned_cols=275 Identities=28% Similarity=0.465 Sum_probs=214.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||++++++|..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-------- 72 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-------- 72 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--------
Confidence 479999999999999999999999999999999975432 22334567889999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
..++|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (364)
T cd05599 73 --------------------------------ENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL 120 (364)
T ss_pred --------------------------------CCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999996 68999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCC---------------CCCCCC--------CccccCcccc
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA---------------FPTDTG--------GVSVDGTGQV 638 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~---------------~~~~~~--------~~~~~~~~~~ 638 (1239)
||+||||||+|||++.++.+||+|||++..+.......... .+.... .......+.+
T Consensus 121 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (364)
T cd05599 121 GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTV 200 (364)
T ss_pred CeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccc
Confidence 99999999999999999999999999997643221100000 000000 0000112457
Q ss_pred cCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCC-CccccCCHHHHHHHHHccC
Q 000880 639 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMS 714 (1239)
Q Consensus 639 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~e~~~LI~~~L~ 714 (1239)
||+.|+|||++.+ ..++.++|||||||++|||++ ||......+............+ +.....++++.+||++||.
T Consensus 201 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~ 279 (364)
T cd05599 201 GTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC 279 (364)
T ss_pred cCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999987 568999999999999999997 7766655544444332222111 2223457899999999997
Q ss_pred CCCCCCCC---HHHHHhccCCCCchHHHH
Q 000880 715 PSPSDRPS---ATELLQDALPPQMEYELL 740 (1239)
Q Consensus 715 ~dP~~RPt---a~eiL~~~~~~~~~~~~~ 740 (1239)
+|.+|++ +.++++||||....+...
T Consensus 280 -~p~~R~~~~~~~~ll~h~~~~~~~~~~~ 307 (364)
T cd05599 280 -EAERRLGNNGVNEIKSHPFFKGVDWEHI 307 (364)
T ss_pred -CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 9999998 999999999999877643
No 69
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-40 Score=372.85 Aligned_cols=256 Identities=26% Similarity=0.390 Sum_probs=215.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
+.|+++..||.|+||+||+|.++.++-..|.|+|.. .+.+..++++-|+.+|+.+.||+||+++++|+-
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~--------- 100 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYF--------- 100 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc---------
Confidence 457889999999999999999999999999999864 345667889999999999999999999988742
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+||..|||+| ....++-. ...+++.++..+++|++.||.|||++
T Consensus 101 -------------------------------enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~ 149 (1187)
T KOG0579|consen 101 -------------------------------ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ 149 (1187)
T ss_pred -------------------------------cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc
Confidence 4678999999976 55555544 45699999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 657 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 657 (1239)
+|||||||..|||++-+|.++|+|||.+....... -...+++|||+|||||++.. ...|+.
T Consensus 150 ~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~---------------qkRDsFIGTPYWMAPEVvmCET~KD~PYDy 214 (1187)
T KOG0579|consen 150 NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR---------------QKRDSFIGTPYWMAPEVVMCETFKDQPYDY 214 (1187)
T ss_pred chhhhhccccceEEEecCcEeeecccccccchhHH---------------hhhccccCCcccccchheeeccccCCCchh
Confidence 99999999999999999999999999987543211 12356899999999998754 245999
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
++|||||||+|.||.. |.....++.+.+++....+...-.+...+..+.+|+++||.+||..||++.++|+|||+.+
T Consensus 215 kaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~ 294 (1187)
T KOG0579|consen 215 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN 294 (1187)
T ss_pred hhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence 9999999999999985 7777788888888776554433344455568999999999999999999999999999996
Q ss_pred ch
Q 000880 735 ME 736 (1239)
Q Consensus 735 ~~ 736 (1239)
..
T Consensus 295 ~~ 296 (1187)
T KOG0579|consen 295 AP 296 (1187)
T ss_pred CC
Confidence 64
No 70
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.5e-38 Score=358.10 Aligned_cols=257 Identities=25% Similarity=0.392 Sum_probs=201.4
Q ss_pred CCceEEeeeccCCceEEEEEEEcc-CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCceeeeeeeeeecCccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIv~l~~~~~e~~~~~ 499 (1239)
++|++.+.||+|+||+||+|++.. +|+.||||+++...........+.+|+.+++.+ +||||++++++|....
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~--- 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR--- 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEeccc---
Confidence 368999999999999999999854 468899999976544433445567788877766 6999999998874211
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~y 577 (1239)
......+++||||++++|.+++... ..+++..++.++.||+.||.|
T Consensus 78 --------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 125 (290)
T cd07862 78 --------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 125 (290)
T ss_pred --------------------------------CCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123568999999999999998753 358999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.
T Consensus 126 lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 188 (290)
T cd07862 126 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----------------MALTSVVVTLWYRAPEVLLQ-SSYAT 188 (290)
T ss_pred HHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC----------------cccccccccccccChHHHhC-CCCCC
Confidence 99999999999999999999999999999999754211 01234579999999999987 56899
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC-CC-----------------------ccccCCHHHHHHHH
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PP-----------------------SWVAKFSEQESLLR 710 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~-p~-----------------------~~~~~~~e~~~LI~ 710 (1239)
++|||||||++|||++ ||...........+....+.. +. .....++.+.+||.
T Consensus 189 ~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (290)
T cd07862 189 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL 268 (290)
T ss_pred ccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHH
Confidence 9999999999999996 676554444333332211100 00 11234567789999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 000880 711 RLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+||+.||++|||+.++|+||||
T Consensus 269 ~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 269 KCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHhccCchhcCCHHHHhcCCCC
Confidence 9999999999999999999997
No 71
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.6e-38 Score=364.36 Aligned_cols=248 Identities=25% Similarity=0.397 Sum_probs=205.9
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCc
Q 000880 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 510 (1239)
Q Consensus 432 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~ 510 (1239)
||+|+||.||+|+++.+++.||+|+++... ........+.+|+.+|+.++||||++++++|..
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---------------- 64 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS---------------- 64 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec----------------
Confidence 799999999999999999999999997532 223345678899999999999999999987632
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 000880 511 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 589 (1239)
Q Consensus 511 ~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLK 589 (1239)
...+|+|||||+ ++|.+++.....+++..+..++.||+.||.|||++||+|||||
T Consensus 65 ------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk 120 (312)
T cd05585 65 ------------------------PEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120 (312)
T ss_pred ------------------------CCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 457899999996 5999999888889999999999999999999999999999999
Q ss_pred cccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHH
Q 000880 590 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 669 (1239)
Q Consensus 590 p~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 669 (1239)
|+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 121 p~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ 184 (312)
T cd05585 121 PENILLDYQGHIALCDFGLCKLNMKDD---------------DKTNTFCGTPEYLAPELLLG-HGYTKAVDWWTLGVLLY 184 (312)
T ss_pred HHHeEECCCCcEEEEECcccccCccCC---------------CccccccCCcccCCHHHHcC-CCCCCccceechhHHHH
Confidence 999999999999999999987532110 01234579999999999987 56899999999999999
Q ss_pred Hhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCchHH
Q 000880 670 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYE 738 (1239)
Q Consensus 670 ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~ 738 (1239)
||++ ||......+...........+|. ..++++.+||.+||..||.+|| ++.+++.||||.+..+.
T Consensus 185 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~ 256 (312)
T cd05585 185 EMLTGLPPFYDENVNEMYRKILQEPLRFPD---GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWK 256 (312)
T ss_pred HHHhCCCCcCCCCHHHHHHHHHcCCCCCCC---cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHH
Confidence 9997 77765555544444443333333 4567899999999999999997 58999999999987544
No 72
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=6.1e-39 Score=404.45 Aligned_cols=358 Identities=15% Similarity=0.143 Sum_probs=268.4
Q ss_pred cccCCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccC--CCccccccEEEEeccCCCeeeecCCC
Q 000880 779 RLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHEL 852 (1239)
Q Consensus 779 ~ld~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~~~~~~D~~G~~l~LRPD~ 852 (1239)
..+..+.|++||+|.++.+++.+++.++++|.+|||++|.||+| ++.. +++...++||+|.|.+|+.++|||+.
T Consensus 254 ~~~~~~~G~~~~lp~~~~~~~~i~~~~~~~~~~~Gy~ei~tP~le~~~l~~~~g~~~~~~~~my~~~d~~~~~~~LRP~~ 333 (638)
T PRK00413 254 HFQEEAPGLPFWHPKGWTIRRELERYIRRKLRKAGYQEVKTPQILDRELWETSGHWDHYRENMFPTTESDGEEYALKPMN 333 (638)
T ss_pred EecCCCCcceEEcccHHHHHHHHHHHHHHHHHHCCCEEEECCeeCCHHHHHhcCChhhhhhccceeecCCCcEEEEecCC
Confidence 34566799999999999999999999999999999999999999 3332 23566899999999999999999999
Q ss_pred cHHHHHHHHhCC----CCceeEEeecCeEEcCCCC---C--CCCceeEEeEEEeCCCCccc-H-HHHHHHHHHHHHhcCC
Q 000880 853 RLPFIRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALT-E-AEVLKVTMDIVTRFFH 921 (1239)
Q Consensus 853 T~~iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~s~~a-D-aEvi~la~~~l~~lgi 921 (1239)
|++++|+++++. ..|+|+||+|+|||+|+++ + |.+||+|+|+|+||..++.+ | +|+|.++.++++.||+
T Consensus 334 ~~~~~r~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~~~g~~~~~~~e~~eii~l~~~~~~~lg~ 413 (638)
T PRK00413 334 CPGHVQIYKQGLRSYRDLPLRLAEFGTVHRYEPSGALHGLMRVRGFTQDDAHIFCTPEQIEEEVKKVIDLILDVYKDFGF 413 (638)
T ss_pred cHHHHHHHhCcCCChhhCCceeeeccCeecCCCCCCCcCcceeeeeEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999998753 3599999999999999986 2 45679999999999988754 6 9999999999999999
Q ss_pred CCceEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHh
Q 000880 922 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 1001 (1239)
Q Consensus 922 ~~~~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~ 1001 (1239)
++ +.+.||++ +. ..+|.++.|......+. +.+...+++.+......+ +
T Consensus 414 ~~-~~i~l~~r--~~---~~~g~~~~~~~~~~~l~----------------------~~l~~~g~~~~~~~~~~~----~ 461 (638)
T PRK00413 414 ED-YEVKLSTR--PE---KRIGSDEMWDKAEAALK----------------------EALDELGLDYEIAPGEGA----F 461 (638)
T ss_pred ce-EEEEEecC--Cc---ccCCCHHHHHHHHHHHH----------------------HHHHHcCCCceecCCccc----c
Confidence 85 99999997 22 24566543322111111 111112222111111111 1
Q ss_pred cCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCC-ccceeEEEEEecCCCCccccccccccccc
Q 000880 1002 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIES-YHRNLFFQVFSVKEKYPATLVEGTLLAVG 1080 (1239)
Q Consensus 1002 ~g~~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~-YYtG~vFe~~~~~~~~~~~~~~~~~i~~G 1080 (1239)
.|+. +.. .+..++.++ ..+ ..+.+|+++.++++ ||||.+++.
T Consensus 462 ~~~~------~~~------~~~~~~~~~----~~l-~~~~~d~~~~~~~dl~Yt~~~~~~-------------------- 504 (638)
T PRK00413 462 YGPK------IDF------QLKDALGRE----WQC-GTIQLDFNLPERFDLTYVGEDGEK-------------------- 504 (638)
T ss_pred ccce------EEE------EeecCCCCe----EEe-ccEeecccChhhcCCEEECCCCCc--------------------
Confidence 1110 000 000111111 000 23667777777777 677663211
Q ss_pred ccccchhhhccccccccccCCCCCCcee---eeeccHHHHHhhCC---CCCcCCCCCCCceEEEEecCCCccHHHHHHHH
Q 000880 1081 GRYDYLLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYP---VDFKPVRNEAGTSVLVCSRGGGGLLVERMELV 1154 (1239)
Q Consensus 1081 GRYD~L~~~fg~~~~~~~~g~~~~~pAv---Gfaigldrl~~~L~---~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia 1154 (1239)
..|++ |++-++||++.+|. .+..|.+ ..|.+|+|++.+ +....+|.+++
T Consensus 505 -----------------------~~p~~i~~~~~g~~eRli~~l~e~~~~~~p~~-~~p~~v~Ii~~~-~~~~~~a~~i~ 559 (638)
T PRK00413 505 -----------------------HRPVMIHRAILGSMERFIGILIEHYAGAFPTW-LAPVQVVVLPIT-DKHADYAKEVA 559 (638)
T ss_pred -----------------------cCcEEEEecceehHHHHHHHHHHHcCCCCCcc-cCcceEEEEEeC-hhHHHHHHHHH
Confidence 13677 77778999998884 2444443 357789999986 66788999999
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHhh
Q 000880 1155 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1231 (1239)
Q Consensus 1155 ~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~~ 1231 (1239)
+.||+.|++|+++.. .+++++++++|++.|++++|++|++|.++|+|+||||.+++|.+++++++++.|++.++++
T Consensus 560 ~~Lr~~gi~v~~d~~-~~~l~kki~~A~~~g~~~~iiiG~~E~~~~~v~vr~~~~~~q~~i~~~~l~~~i~~~~~~~ 635 (638)
T PRK00413 560 KKLKAAGIRVEVDLR-NEKIGYKIREAQLQKVPYMLVVGDKEVEAGTVSVRRRGGKDLGTMSLDEFIERLLEEIASR 635 (638)
T ss_pred HHHHhCCCEEEEECC-CCCHhHHHHHhhccCCCEEEEEcchhhhcCeEEEEECCCCccceeeHHHHHHHHHHHHhhc
Confidence 999999999998877 6799999999999999999999999999999999999999999999999999999888753
No 73
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.7e-38 Score=374.14 Aligned_cols=275 Identities=27% Similarity=0.446 Sum_probs=212.1
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++++.||+|+||+||+|.++.+|+.||||++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-------- 72 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-------- 72 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc--------
Confidence 479999999999999999999999999999999865322 22334578899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
..++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~ 120 (377)
T cd05629 73 --------------------------------AQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL 120 (377)
T ss_pred --------------------------------CCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999996 69999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhcccccccc--------CCCCCC---------CCC---------------C
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ--------DAAFPT---------DTG---------------G 629 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~--------~~~~~~---------~~~---------------~ 629 (1239)
||+||||||+|||++.++.+||+|||+|+.+....... ...... +.. .
T Consensus 121 givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T cd05629 121 GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKN 200 (377)
T ss_pred CeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhc
Confidence 99999999999999999999999999997432111000 000000 000 0
Q ss_pred ccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC-CCccccCCHHH
Q 000880 630 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQ 705 (1239)
Q Consensus 630 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~-p~~~~~~~~e~ 705 (1239)
......+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||...........+....... .+.....++++
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~ 279 (377)
T cd05629 201 RRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEA 279 (377)
T ss_pred ccccccccCCCccccCHHHHcc-CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHH
Confidence 0001123579999999999987 568999999999999999997 776555544443333211111 12233467799
Q ss_pred HHHHHHccCCCCCCC---CCHHHHHhccCCCCchHHHH
Q 000880 706 ESLLRRLMSPSPSDR---PSATELLQDALPPQMEYELL 740 (1239)
Q Consensus 706 ~~LI~~~L~~dP~~R---Pta~eiL~~~~~~~~~~~~~ 740 (1239)
++||.+||. +|.+| +|+.++++||||....+..+
T Consensus 280 ~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~ 316 (377)
T cd05629 280 EDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTI 316 (377)
T ss_pred HHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 999999998 67665 59999999999998877654
No 74
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.1e-38 Score=365.81 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=207.4
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
+.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------------- 65 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--------------- 65 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE---------------
Confidence 369999999999999999999999999975432 2334567889999999999999999998763
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
....+|+||||++ ++|..++.....+++..++.++.||+.||+|||++||+|||
T Consensus 66 -------------------------~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 66 -------------------------TKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred -------------------------cCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 2457899999996 58998988888899999999999999999999999999999
Q ss_pred CCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHH
Q 000880 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 667 (1239)
Q Consensus 588 LKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 667 (1239)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvi 184 (328)
T cd05593 121 LKLENLMLDKDGHIKITDFGLCKEGITDA---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (328)
T ss_pred cCHHHeEECCCCcEEEecCcCCccCCCcc---------------cccccccCCcCccChhhhcC-CCCCccCCccccchH
Confidence 99999999999999999999987531110 01234579999999999987 568999999999999
Q ss_pred HHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHHH
Q 000880 668 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 739 (1239)
Q Consensus 668 L~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 739 (1239)
+|||++ ||..................+|. ..++++.+||++||..||.+|| ++.++++|+||....+..
T Consensus 185 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~ 261 (328)
T cd05593 185 MYEMMCGRLPFYNQDHEKLFELILMEDIKFPR---TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQD 261 (328)
T ss_pred HHHHhhCCCCCCCCCHHHHHHHhccCCccCCC---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence 999997 88665554444433333333333 4567899999999999999997 899999999999887653
No 75
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.8e-38 Score=365.23 Aligned_cols=251 Identities=26% Similarity=0.372 Sum_probs=207.9
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-------------- 66 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-------------- 66 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--------------
Confidence 369999999999999999999999999975322 22344567889999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 120 (323)
T cd05595 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120 (323)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 357899999996 58999988888899999999999999999999999999999
Q ss_pred CCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHH
Q 000880 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 667 (1239)
Q Consensus 588 LKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 667 (1239)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi 184 (323)
T cd05595 121 IKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEEcCCCCEEecccHHhccccCCC---------------CccccccCCcCcCCcccccC-CCCCchhchhhhHHH
Confidence 99999999999999999999987431110 01134579999999999987 568999999999999
Q ss_pred HHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHHH
Q 000880 668 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 739 (1239)
Q Consensus 668 L~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 739 (1239)
+|||++ ||..................+|. ..++++.+||.+||+.||.+|| ++.++++|+||.+..+..
T Consensus 185 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~ 261 (323)
T cd05595 185 MYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 261 (323)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999997 88766555444444433333443 4567999999999999999998 899999999999887654
No 76
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6e-38 Score=379.18 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=201.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.++|||||+++++|.....
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~------ 133 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECF------ 133 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccc------
Confidence 57999999999999999999999999999999885322 234579999999999999999987743210
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
.......++++|||||+++|.+++. ....+++..++.++.||+.||+|||
T Consensus 134 --------------------------~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 134 --------------------------KKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred --------------------------ccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0011235688999999998887765 3456999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 580 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
++||+||||||+|||++.++ .+||+|||+|+.+.... .....+||+.|+|||++.+...|+.+
T Consensus 188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~~ 251 (440)
T PTZ00036 188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ----------------RSVSYICSRFYRAPELMLGATNYTTH 251 (440)
T ss_pred HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC----------------CcccCCCCcCccCHHHhcCCCCCCcH
Confidence 99999999999999999765 69999999998653211 11345789999999998775579999
Q ss_pred hhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcC-----------------CCCC----c-----cccCCHHHHHHH
Q 000880 659 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------ELPP----S-----WVAKFSEQESLL 709 (1239)
Q Consensus 659 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~-----------------~~p~----~-----~~~~~~e~~~LI 709 (1239)
+|||||||+||||++ ||...........++...+ .+|. . ....++++.+||
T Consensus 252 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li 331 (440)
T PTZ00036 252 IDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFI 331 (440)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHH
Confidence 999999999999997 7765544333322221110 0110 0 112456899999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 710 RRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 710 ~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
.+||..||.+|||+.++++||||...
T Consensus 332 ~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 332 SQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHCCCChhHCcCHHHHhCChhHHhh
Confidence 99999999999999999999998654
No 77
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.5e-38 Score=373.18 Aligned_cols=252 Identities=21% Similarity=0.315 Sum_probs=200.7
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
..++|++++.||+|+||.||+|.+..+++.||||+.. ...+.+|+.+|+.++|||||+++++|..
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~------- 154 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTY------- 154 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-------
Confidence 4568999999999999999999999999999999653 2346789999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....+++||++.++|..++.....+++..++.++.||+.||+|||++
T Consensus 155 ---------------------------------~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~ 201 (391)
T PHA03212 155 ---------------------------------NKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN 201 (391)
T ss_pred ---------------------------------CCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34679999999999999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+|+...... .......+||+.|+|||++.+ ..++.++||
T Consensus 202 ~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 266 (391)
T PHA03212 202 RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN--------------ANKYYGWAGTIATNAPELLAR-DPYGPAVDI 266 (391)
T ss_pred CcccCCCChHhEEEcCCCCEEEEeCCccccccccc--------------ccccccccCccCCCChhhhcC-CCCCcHHHH
Confidence 99999999999999999999999999997532111 001234589999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhH-------HHHHHHHhhhhcC--------------------------CCC---Ccc---c
Q 000880 662 YSLGIVFFELWH---PFSTAM-------ERQIVLSDLKQKG--------------------------ELP---PSW---V 699 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~-------~~~~~~~~~~~~~--------------------------~~p---~~~---~ 699 (1239)
|||||++|||++ ||.... .......++...+ ..+ +.| .
T Consensus 267 wSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (391)
T PHA03212 267 WSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLY 346 (391)
T ss_pred HHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHh
Confidence 999999999997 443211 0000000000000 000 111 1
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 700 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 700 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
..+.++.+||.+||+.||.+|||+.++|+|+||....
T Consensus 347 ~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~ 383 (391)
T PHA03212 347 ELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP 383 (391)
T ss_pred hhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence 2344788999999999999999999999999997653
No 78
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7e-38 Score=372.39 Aligned_cols=272 Identities=25% Similarity=0.408 Sum_probs=212.6
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.|+++++||+|+||+||+|+++.+++.||||++..... .......+.+|+.+++.++||||++++++|..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--------- 72 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--------- 72 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe---------
Confidence 58999999999999999999999999999999975432 22344678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 589999988888999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCC-----------CCCC---------------------CCCCc
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA-----------AFPT---------------------DTGGV 630 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~-----------~~~~---------------------~~~~~ 630 (1239)
|+||||||+|||++.++++||+|||+|+.+......... .+.. .....
T Consensus 122 ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (382)
T cd05625 122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQ 201 (382)
T ss_pred eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence 999999999999999999999999998643211000000 0000 00000
Q ss_pred cccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-CCCccccCCHHHH
Q 000880 631 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQE 706 (1239)
Q Consensus 631 ~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~e~~ 706 (1239)
.....+.+||+.|+|||++.+ ..|+.++|||||||+||||++ ||......+....+...... ..+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~ 280 (382)
T cd05625 202 RCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEAS 280 (382)
T ss_pred cccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHH
Confidence 001234589999999999987 568999999999999999997 88766555554444432222 1223345678999
Q ss_pred HHHHHccCCCCCCCCC---HHHHHhccCCCCchHH
Q 000880 707 SLLRRLMSPSPSDRPS---ATELLQDALPPQMEYE 738 (1239)
Q Consensus 707 ~LI~~~L~~dP~~RPt---a~eiL~~~~~~~~~~~ 738 (1239)
++|.+|+ .+|.+|++ +.++++||||....+.
T Consensus 281 ~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~ 314 (382)
T cd05625 281 DLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFS 314 (382)
T ss_pred HHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChH
Confidence 9999976 59999997 9999999999987654
No 79
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-37 Score=367.45 Aligned_cols=260 Identities=28% Similarity=0.386 Sum_probs=204.7
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
..++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 93 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK----- 93 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 468999999999999999999999999999999999755444445667889999999999999999998874321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
.......+|+||||++++|.+.+.. .+++..+..++.||+.||.|||++
T Consensus 94 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 142 (359)
T cd07876 94 -----------------------------SLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSA 142 (359)
T ss_pred -----------------------------CccccceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0012346899999999988887743 488999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++..... ...+...||+.|+|||++.+ ..++.++||
T Consensus 143 ~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 205 (359)
T cd07876 143 GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 205 (359)
T ss_pred CcccCCCCHHHEEECCCCCEEEecCCCccccccC----------------ccCCCCcccCCCCCchhccC-CCCCcchhh
Confidence 9999999999999999999999999999753211 01234578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhh----------------------hhcCCCCC--------c---------cc
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDL----------------------KQKGELPP--------S---------WV 699 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~----------------------~~~~~~p~--------~---------~~ 699 (1239)
|||||++|+|++ ||............. ......+. . ..
T Consensus 206 wSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (359)
T cd07876 206 WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDK 285 (359)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccccccccccccc
Confidence 999999999996 776443221111000 00111100 0 01
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 700 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 700 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
..++++++||.+||+.||.+|||+.++|+|||+..
T Consensus 286 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 286 LKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred ccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 12357899999999999999999999999999864
No 80
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=344.49 Aligned_cols=285 Identities=25% Similarity=0.389 Sum_probs=230.9
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
-+++|..+++||+|.||+|.+|+.+.+|+.||||++++.-. .......-+.|-.+|...+||.+..+...|
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF-------- 237 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF-------- 237 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh--------
Confidence 47899999999999999999999999999999999975432 233344567899999999999998876554
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
+....+++||||+. |.|.-+|.....|+++.++.+-.+|+.||.|||
T Consensus 238 --------------------------------Qt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLH 285 (516)
T KOG0690|consen 238 --------------------------------QTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLH 285 (516)
T ss_pred --------------------------------ccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhh
Confidence 33578999999995 689999988888999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+++||+||||.+|+|+|.+||+||+|||+++.-. .. -.++.++||||.|+|||++.. ..|+.++
T Consensus 286 s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I----~~-----------g~t~kTFCGTPEYLAPEVleD-nDYgraV 349 (516)
T KOG0690|consen 286 SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI----KY-----------GDTTKTFCGTPEYLAPEVLED-NDYGRAV 349 (516)
T ss_pred hCCeeeeechhhhheeccCCceEeeecccchhcc----cc-----------cceeccccCChhhcCchhhcc-cccccee
Confidence 9999999999999999999999999999998421 11 123467899999999999998 6899999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDAL 731 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~ 731 (1239)
|+|.+||++|||++ ||.........--++.....+|. ..+++++.|+..+|.+||.+|. .+.+|.+|+|
T Consensus 350 DWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr---~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~F 426 (516)
T KOG0690|consen 350 DWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR---TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRF 426 (516)
T ss_pred ehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc---cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhh
Confidence 99999999999997 99877665555444544555554 4567999999999999999997 4899999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCcchhhhccccccch
Q 000880 732 PPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE 767 (1239)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~ 767 (1239)
|..+.|... +...+.+|.....-+.....-||++
T Consensus 427 F~~v~W~~~--~~Kki~PPfKPqVtSetDTryFD~E 460 (516)
T KOG0690|consen 427 FASVDWEAT--YRKKIEPPFKPQVTSETDTRYFDEE 460 (516)
T ss_pred hccCCHHHH--HHhccCCCCCCCcccccchhhhhhh
Confidence 999988643 4445554433333333333334433
No 81
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.7e-38 Score=372.30 Aligned_cols=275 Identities=24% Similarity=0.403 Sum_probs=213.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++++.||+|+||.||+|+++.+++.||||++..... .......+.+|+.+|+.++||||+++++.|.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-------- 72 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-------- 72 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--------
Confidence 479999999999999999999999999999999864322 12234568899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (376)
T cd05598 73 --------------------------------KDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM 120 (376)
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999996 69999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhcccccccc----------C-CCCCCC-----------------CCCcccc
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ----------D-AAFPTD-----------------TGGVSVD 633 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~----------~-~~~~~~-----------------~~~~~~~ 633 (1239)
||+||||||+|||++.++++||+|||+|..+....... . ...+.. .......
T Consensus 121 ~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (376)
T cd05598 121 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCL 200 (376)
T ss_pred CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhccccc
Confidence 99999999999999999999999999986432100000 0 000000 0000011
Q ss_pred CcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-CCCccccCCHHHHHHH
Q 000880 634 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLL 709 (1239)
Q Consensus 634 ~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~e~~~LI 709 (1239)
..+.+||+.|||||++.+ ..++.++|||||||++|||++ ||......+....+...... ..+.....++++.++|
T Consensus 201 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 279 (376)
T cd05598 201 AHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLI 279 (376)
T ss_pred ccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHH
Confidence 234689999999999987 568999999999999999997 88766554443333322211 1223345678999999
Q ss_pred HHccCCCCCCCC---CHHHHHhccCCCCchHHHH
Q 000880 710 RRLMSPSPSDRP---SATELLQDALPPQMEYELL 740 (1239)
Q Consensus 710 ~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~~~ 740 (1239)
.+|+ .+|.+|+ |+.++++|+||.+..+...
T Consensus 280 ~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~~ 312 (376)
T cd05598 280 LRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASL 312 (376)
T ss_pred HHHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHHH
Confidence 9976 5999999 9999999999999876544
No 82
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.2e-37 Score=369.19 Aligned_cols=263 Identities=28% Similarity=0.383 Sum_probs=209.2
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++.....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 73 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHI------- 73 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCc-------
Confidence 5788899999999999999999999999999986543343445678999999999999999999988743210
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
.....+|+||||++++|.+.+.....+++..++.++.||+.||+|||++||+
T Consensus 74 ----------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv 125 (372)
T cd07853 74 ----------------------------DPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGIL 125 (372)
T ss_pred ----------------------------cccceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 0123689999999999999998888899999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
||||||+|||++.++.+||+|||+++...... ....+...+|+.|+|||++.+...++.++|||||
T Consensus 126 H~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl 191 (372)
T cd07853 126 HRDIKPGNLLVNSNCVLKICDFGLARVEEPDE--------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSV 191 (372)
T ss_pred CCCCChHHEEECCCCCEEeccccceeecccCc--------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhH
Confidence 99999999999999999999999997542111 0112345789999999999875668999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHhh----------------------hhcCCCCCc-------cccCCHHHHHHHHHc
Q 000880 665 GIVFFELWH---PFSTAMERQIVLSDL----------------------KQKGELPPS-------WVAKFSEQESLLRRL 712 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~~~~~~~~~~~----------------------~~~~~~p~~-------~~~~~~e~~~LI~~~ 712 (1239)
||++|||++ ||...........+. ......++. ....++++.+||.+|
T Consensus 192 G~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m 271 (372)
T cd07853 192 GCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRM 271 (372)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHh
Confidence 999999996 775443322211111 111111111 123456889999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 000880 713 MSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|+.||.+|||+.++++|||+....
T Consensus 272 L~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 272 LVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred CCCChhhCcCHHHHhcCHhhCCCc
Confidence 999999999999999999998764
No 83
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=350.67 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=204.8
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
.|...+++|.|+||.||+|....+++.||||+...... .-.+|+.+|+.+.|||||++..+|..+..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~------- 91 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTE------- 91 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCC-------
Confidence 57778999999999999999999999999998753322 23479999999999999999988855420
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
.+..++.+||||+|.+|.+.++. ..+++.-.++-++.||++||.|||+
T Consensus 92 ----------------------------~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~ 143 (364)
T KOG0658|consen 92 ----------------------------SDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS 143 (364)
T ss_pred ----------------------------CchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence 12457789999999999999985 4678888999999999999999999
Q ss_pred CCccccCCCcccEEEcCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 581 QGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
.||+||||||.|+|+|.+ |.+||||||.|+.+...+. ..++.-|..|.|||.+.|...|+.+.
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep----------------niSYicSRyYRaPELifga~~Yt~~I 207 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP----------------NISYICSRYYRAPELIFGATEYTTSI 207 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC----------------ceeEEEeccccCHHHHcCccccCcee
Confidence 999999999999999987 8899999999998754331 25678899999999999988999999
Q ss_pred hhHHHHHHHHHhhc--CC-chhHHHHHHHHhhhh------------cC-----CCC----C-----ccccCCHHHHHHHH
Q 000880 660 DMYSLGIVFFELWH--PF-STAMERQIVLSDLKQ------------KG-----ELP----P-----SWVAKFSEQESLLR 710 (1239)
Q Consensus 660 DIwSlGviL~ELlt--Pf-~~~~~~~~~~~~~~~------------~~-----~~p----~-----~~~~~~~e~~~LI~ 710 (1239)
||||.||++.||+. |. .+.+.......++.. ++ .+| . .....++++.+|+.
T Consensus 208 DiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~ 287 (364)
T KOG0658|consen 208 DIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLS 287 (364)
T ss_pred EEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHH
Confidence 99999999999995 43 333322222211110 00 011 1 12335578999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 000880 711 RLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
++|..+|.+|.++.++++|+||....
T Consensus 288 ~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 288 KLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred HHhccChhhcCCHHHHhcchhhHHhh
Confidence 99999999999999999999887653
No 84
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.2e-37 Score=367.52 Aligned_cols=275 Identities=26% Similarity=0.427 Sum_probs=214.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++++.||+|+||.||+|+++.+++.||||+++.... .......+.+|+.++..++||||+++++.|.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--------- 71 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ--------- 71 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE---------
Confidence 479999999999999999999999999999999974322 2234567888999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~ 120 (360)
T cd05627 72 -------------------------------DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL 120 (360)
T ss_pred -------------------------------cCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 58999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCC----CC-CC-------CC--------CCccccCcccccCc
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA----AF-PT-------DT--------GGVSVDGTGQVGTY 641 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~----~~-~~-------~~--------~~~~~~~~~~~GT~ 641 (1239)
||+||||||+|||++.++++||+|||++..+......... .. +. .. ........+.+||+
T Consensus 121 givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 200 (360)
T cd05627 121 GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTP 200 (360)
T ss_pred CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCc
Confidence 9999999999999999999999999999755321100000 00 00 00 00000123468999
Q ss_pred cCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc--CCCCCccccCCHHHHHHHHHccCCC
Q 000880 642 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPS 716 (1239)
Q Consensus 642 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~e~~~LI~~~L~~d 716 (1239)
.|+|||++.+ ..++.++|||||||++|||++ ||...........+.... ..+|+. ...++++++||.+|+ .|
T Consensus 201 ~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~-~~ 277 (360)
T cd05627 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPE-VPISEKAKDLILRFC-TD 277 (360)
T ss_pred cccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCC-CCCCHHHHHHHHHhc-cC
Confidence 9999999987 568999999999999999997 887665555444433211 222322 235678999999977 49
Q ss_pred CCCCC---CHHHHHhccCCCCchHHHHH
Q 000880 717 PSDRP---SATELLQDALPPQMEYELLD 741 (1239)
Q Consensus 717 P~~RP---ta~eiL~~~~~~~~~~~~~~ 741 (1239)
|.+|+ ++.++++||||.+..+..+.
T Consensus 278 p~~R~~~~~~~ei~~hp~f~~~~~~~~~ 305 (360)
T cd05627 278 SENRIGSNGVEEIKSHPFFEGVDWGHIR 305 (360)
T ss_pred hhhcCCCCCHHHHhcCCCCCCCCHHHHh
Confidence 99998 58999999999999887553
No 85
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.6e-37 Score=351.98 Aligned_cols=256 Identities=27% Similarity=0.405 Sum_probs=199.3
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCceeeeeeeeeecCccccC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
+|++.+.||+|+||+||+|+++.+|+.||+|.++...........+.+|+.+++.+ +||||++++++|....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~----- 75 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR----- 75 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc-----
Confidence 48899999999999999999999999999999876443333334566777777665 7999999998874321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
......++++|||++++|.+++... ..+++..++.++.||+.||.|||
T Consensus 76 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 125 (288)
T cd07863 76 ------------------------------TDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125 (288)
T ss_pred ------------------------------CCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0124568999999999999988764 34899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++||+||||||+|||++.++.+||+|||+++...... ..+...||+.|+|||++.+ ..++.++
T Consensus 126 ~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (288)
T cd07863 126 ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQM----------------ALTPVVVTLWYRAPEVLLQ-STYATPV 188 (288)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccCccccccCcc----------------cCCCccccccccCchHhhC-CCCCCcc
Confidence 9999999999999999999999999999998643111 1133578999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcC----------------CCC--------CccccCCHHHHHHHHHc
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELP--------PSWVAKFSEQESLLRRL 712 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~----------------~~p--------~~~~~~~~e~~~LI~~~ 712 (1239)
|||||||++|+|++ ||................+ .+. .........+.++|.+|
T Consensus 189 DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 268 (288)
T cd07863 189 DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEM 268 (288)
T ss_pred hhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHH
Confidence 99999999999996 5544433322222111000 000 01123445778999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 000880 713 MSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~ 732 (1239)
|+.||.+|||+.+++.||||
T Consensus 269 L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 269 LTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred hccCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
No 86
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.7e-37 Score=360.62 Aligned_cols=257 Identities=26% Similarity=0.385 Sum_probs=210.5
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCC-ceeeeeeeeeecCccccCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~Hp-nIv~l~~~~~e~~~~~~~~ 502 (1239)
+|++++.||+|+||.||+|+++.+++.||||+++.... .......+..|..+++.+.|+ +|+.+++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------- 72 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-------- 72 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--------
Confidence 58999999999999999999999999999999975322 223445688899999999775 57777777632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (324)
T cd05587 73 --------------------------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK 120 (324)
T ss_pred --------------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 357899999996 69999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (324)
T cd05587 121 GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG---------------KTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (324)
T ss_pred CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC---------------CceeeecCCccccChhhhcC-CCCCcccch
Confidence 99999999999999999999999999986421100 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhccCCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPP 733 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~~~~~ 733 (1239)
|||||++|||++ ||......+....+......+|. ..++++.++|++||..||.+|++. .++++||||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~ 261 (324)
T cd05587 185 WAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFR 261 (324)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcC
Confidence 999999999997 88766555555444443333333 456789999999999999999976 8999999999
Q ss_pred CchHHHH
Q 000880 734 QMEYELL 740 (1239)
Q Consensus 734 ~~~~~~~ 740 (1239)
...+...
T Consensus 262 ~~~~~~~ 268 (324)
T cd05587 262 RIDWEKL 268 (324)
T ss_pred CCCHHHH
Confidence 9876543
No 87
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.4e-38 Score=364.52 Aligned_cols=264 Identities=25% Similarity=0.395 Sum_probs=213.6
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-------- 72 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-------- 72 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec--------
Confidence 479999999999999999999999999999999975432 22344568899999999999999999987632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||.|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 120 (330)
T cd05601 73 --------------------------------KDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ 120 (330)
T ss_pred --------------------------------CCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 6999999876 679999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-----CCCC
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-----WPKI 655 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~~ 655 (1239)
+||+||||||+|||++.++.+||+|||++..+..... .......||+.|+|||++.. ...+
T Consensus 121 ~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (330)
T cd05601 121 MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM--------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTY 186 (330)
T ss_pred CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--------------eeeecccCCccccCHHHhccccccccCCC
Confidence 9999999999999999999999999999986532110 01123479999999999863 2457
Q ss_pred CcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 656 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
+.++|||||||++|||++ ||...........+...... ..+.....++++.+||.+||+ +|.+|||+.++++|||
T Consensus 187 ~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 187 GVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred CCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence 899999999999999997 88665554444333322211 112233467789999999998 9999999999999999
Q ss_pred CCCchHHHHHH
Q 000880 732 PPQMEYELLDN 742 (1239)
Q Consensus 732 ~~~~~~~~~~~ 742 (1239)
|....+..+..
T Consensus 266 ~~~~~~~~~~~ 276 (330)
T cd05601 266 FSKIDWNNIRN 276 (330)
T ss_pred cCCCCHHHHhh
Confidence 99987765543
No 88
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.5e-37 Score=359.24 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=206.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++++.||+|+||.||+++++.+|..||+|++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 74 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 74 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--------
Confidence 478999999999999999999999999999999987542 33445679999999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||++ ++|.+++.....+++..+..++.||+.||.|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 75 --------------------------------DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred --------------------------------CCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 346899999997 59999998888899999999999999999999986
Q ss_pred -CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 582 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 582 -gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+|+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 184 (331)
T cd06649 123 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSD 184 (331)
T ss_pred CCEEcCCCChhhEEEcCCCcEEEccCccccccccc-----------------ccccCCCCcCcCCHhHhcC-CCCCchHh
Confidence 6999999999999999999999999998754211 1133579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhh---------------------------------------------cC
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQ---------------------------------------------KG 692 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~---------------------------------------------~~ 692 (1239)
||||||++|||++ ||......+.. ..+.. ..
T Consensus 185 iwslG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd06649 185 IWSMGLSLVELAIGRYPIPPPDAKELE-AIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNE 263 (331)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHH-HHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhC
Confidence 9999999999996 77543322211 10000 00
Q ss_pred CCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 693 ELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 693 ~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
..+. .....++++++||.+||..||++|||+.++++|+|+....
T Consensus 264 ~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 264 PPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred CCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0111 1113456899999999999999999999999999987654
No 89
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.2e-37 Score=361.41 Aligned_cols=251 Identities=25% Similarity=0.400 Sum_probs=206.2
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..++..+ +||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~------------- 67 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT------------- 67 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-------------
Confidence 369999999999999999999999999974321 223345677888888877 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~ 120 (320)
T cd05590 68 ---------------------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120 (320)
T ss_pred ---------------------------CCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 357899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (320)
T cd05590 121 DLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------------KTTSTFCGTPDYIAPEILQE-MLYGPSVDWWAMGV 184 (320)
T ss_pred CCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------CcccccccCccccCHHHHcC-CCCCCccchhhhHH
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH------HHHHhccCCCCchH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA------TELLQDALPPQMEY 737 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta------~eiL~~~~~~~~~~ 737 (1239)
++|||++ ||...........+.......|. ..++++.++|++||+.||.+||++ +++++||||....+
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 185 LLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 9999996 88766655554444433323332 356789999999999999999998 99999999998876
Q ss_pred HH
Q 000880 738 EL 739 (1239)
Q Consensus 738 ~~ 739 (1239)
..
T Consensus 262 ~~ 263 (320)
T cd05590 262 EK 263 (320)
T ss_pred HH
Confidence 54
No 90
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.1e-37 Score=364.94 Aligned_cols=261 Identities=26% Similarity=0.394 Sum_probs=205.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|.+++.||+|+||.||+|.+..+++.||||++............+.+|+.+|+.++||||++++++|.....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 88 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS----- 88 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc-----
Confidence 367999999999999999999999999999999987544333445668899999999999999999987743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
.......|++|++++++|.+++. ...+++..++.++.||+.||+|||++|
T Consensus 89 -----------------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 89 -----------------------------IENFNEVYLVTNLMGADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred -----------------------------ccccCcEEEEeecCCCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 01234579999999999988775 356999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+|||++.++.+||+|||+++.... ..+..+||+.|+|||++.+...++.++|||
T Consensus 139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 200 (343)
T cd07878 139 IIHRDLKPSNVAVNEDCELRILDFGLARQADD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 200 (343)
T ss_pred eecccCChhhEEECCCCCEEEcCCccceecCC------------------CcCCccccccccCchHhcCCccCCchhhhH
Confidence 99999999999999999999999999975421 123457999999999998755689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhc-----------------------CCCCC-----ccccCCHHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQK-----------------------GELPP-----SWVAKFSEQESLLRR 711 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~-----------------------~~~p~-----~~~~~~~e~~~LI~~ 711 (1239)
||||++|+|++ ||................ ...+. .+....+.+.+||.+
T Consensus 201 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 280 (343)
T cd07878 201 SVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEK 280 (343)
T ss_pred hHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHH
Confidence 99999999996 665433222211111000 00110 112344568899999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 000880 712 LMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||..||.+|||+.++++||||.+..
T Consensus 281 mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 281 MLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred HcCCChhhCCCHHHHhcCcchhccC
Confidence 9999999999999999999997653
No 91
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-38 Score=354.78 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=222.1
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
+...=|.+.+.||+|.|..|.+|+|..||..||||+|.+...+.-....+++|+..|+.++|||||++|.+.
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi-------- 86 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI-------- 86 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh--------
Confidence 334567888999999999999999999999999999987665555566899999999999999999999764
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
.....+|+|+|+-+ |+|++++.+. ..+.++.+.+|+.||+.|+.|+
T Consensus 87 --------------------------------DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YC 134 (864)
T KOG4717|consen 87 --------------------------------DTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYC 134 (864)
T ss_pred --------------------------------cccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHH
Confidence 13578999999996 5999998765 4699999999999999999999
Q ss_pred HhCCccccCCCcccEEEcC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 579 HGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
|...+|||||||+||.+-+ -|-|||.|||++..+.+.. ..++.||++.|.|||+|.|..+-.+
T Consensus 135 HqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~----------------kL~TsCGSLAYSAPEILLGDsYDAP 198 (864)
T KOG4717|consen 135 HQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK----------------KLTTSCGSLAYSAPEILLGDSYDAP 198 (864)
T ss_pred hhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc----------------hhhcccchhhccCchhhhcCccCCc
Confidence 9999999999999998765 4889999999998764332 1356799999999999999655568
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
++||||||||||-|++ ||....+.+.+..++.-+...|.. .+.++++||..||..||.+|.+.++|..++|.+.
T Consensus 199 AVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPsh---vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 199 AVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSH---VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred chhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchh---hhHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 9999999999999986 999888888877777766666654 4459999999999999999999999999999987
Q ss_pred chH
Q 000880 735 MEY 737 (1239)
Q Consensus 735 ~~~ 737 (1239)
...
T Consensus 276 ~D~ 278 (864)
T KOG4717|consen 276 GDR 278 (864)
T ss_pred CCC
Confidence 653
No 92
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.1e-37 Score=364.60 Aligned_cols=261 Identities=28% Similarity=0.387 Sum_probs=205.5
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
..++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||++++++|....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 89 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 89 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc-----
Confidence 467999999999999999999999999999999998755444455677889999999999999999998874321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
.......+|++||||+++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 90 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~ 138 (355)
T cd07874 90 -----------------------------SLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 138 (355)
T ss_pred -----------------------------cccccceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0012346899999999988887753 488999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||
T Consensus 139 givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 201 (355)
T cd07874 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 201 (355)
T ss_pred CcccCCCChHHEEECCCCCEEEeeCcccccCCCc----------------cccCCccccCCccCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhh----------------------cCC-----CCC------------ccc
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQ----------------------KGE-----LPP------------SWV 699 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~----------------------~~~-----~p~------------~~~ 699 (1239)
|||||++|+|++ ||............+.. ... .+. ...
T Consensus 202 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T cd07874 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281 (355)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccccccccc
Confidence 999999999996 77543322211111100 000 000 001
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 700 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 700 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
....++++||.+||..||.+|||+.++|+|||+...
T Consensus 282 ~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 282 LKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred ccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 123467899999999999999999999999999644
No 93
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.6e-37 Score=365.12 Aligned_cols=260 Identities=28% Similarity=0.386 Sum_probs=206.1
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
..++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~----- 96 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK----- 96 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccc-----
Confidence 357999999999999999999999999999999999755444455667889999999999999999998763221
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
.......+|+||||++++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 97 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~ 145 (364)
T cd07875 97 -----------------------------SLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145 (364)
T ss_pred -----------------------------cccccCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhC
Confidence 0112356899999999998888753 488899999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++..... ...+...||+.|+|||++.+ ..++.++||
T Consensus 146 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 208 (364)
T cd07875 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 208 (364)
T ss_pred CeecCCCCHHHEEECCCCcEEEEeCCCccccCCC----------------CcccCCcccCCcCCHHHHhC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234579999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-------------------CC--------------------Cccc
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LP--------------------PSWV 699 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-------------------~p--------------------~~~~ 699 (1239)
|||||++|||++ ||............+...+. .| ....
T Consensus 209 wSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (364)
T cd07875 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288 (364)
T ss_pred HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccc
Confidence 999999999997 77654433322222111000 00 0001
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 700 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 700 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
....++++||.+||+.||.+|||+.++|+|||+..
T Consensus 289 ~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred cccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 12346789999999999999999999999999864
No 94
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.4e-37 Score=355.46 Aligned_cols=258 Identities=25% Similarity=0.398 Sum_probs=205.7
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+++|.+.+.||+|+||.||+|+++.+++.||+|+++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 75 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHT-------- 75 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEee--------
Confidence 47899999999999999999999999999999999754322 233467889999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||++++|.+.+.... .+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (309)
T cd07872 76 --------------------------------DKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR 123 (309)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35689999999999988886544 589999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++...... .......+|+.|+|||++.+...++.++||
T Consensus 124 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 188 (309)
T cd07872 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDM 188 (309)
T ss_pred CeecCCCCHHHEEECCCCCEEECccccceecCCCc---------------cccccccccccccCCHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999987532111 011234689999999998765668999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhc-------------------CCCCC--------ccccCCHHHHHHHHH
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK-------------------GELPP--------SWVAKFSEQESLLRR 711 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~-------------------~~~p~--------~~~~~~~e~~~LI~~ 711 (1239)
|||||++|+|++ ||................ ...+. .....++++.+||.+
T Consensus 189 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (309)
T cd07872 189 WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTK 268 (309)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHH
Confidence 999999999997 675443322221111100 00010 112345688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 000880 712 LMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||+.||.+|||+.++++|+||....
T Consensus 269 ~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 269 FLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999998764
No 95
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.1e-37 Score=366.62 Aligned_cols=262 Identities=23% Similarity=0.393 Sum_probs=211.5
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.++|++.+.||+|+||.||+|+++.+++.||+|+++.... .......+.+|+.+++.++||||+++++++.
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-------- 113 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-------- 113 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe--------
Confidence 5799999999999999999999999999999999974321 2223345778999999999999999998773
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
....+|+|||||+ |+|.+++.. ..+++..+..++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~ 160 (370)
T cd05596 114 --------------------------------DDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHS 160 (370)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 689988865 458999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CCCCc
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PKIDE 657 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~~~ 657 (1239)
+||+||||||+|||++.++.+||+|||++........ ......+||+.|+|||++.+. ..++.
T Consensus 161 ~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05596 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM--------------VRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc--------------ccCCCCCCCcCeECHHHhccCCCCCCCCC
Confidence 9999999999999999999999999999976432110 011345799999999998753 23789
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC-CCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhccC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 731 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~~ 731 (1239)
++|||||||++|||++ ||...........+....... .+.....+.++.+||++||..+|.+ |+|+.++++|+|
T Consensus 227 ~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred ceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 9999999999999997 887665544444443322221 1233346789999999999999988 999999999999
Q ss_pred CCCchHHH
Q 000880 732 PPQMEYEL 739 (1239)
Q Consensus 732 ~~~~~~~~ 739 (1239)
|.+..+..
T Consensus 307 ~~~~~~~~ 314 (370)
T cd05596 307 FKNDQWTF 314 (370)
T ss_pred cCCCChhh
Confidence 99876653
No 96
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=5.8e-37 Score=381.47 Aligned_cols=350 Identities=13% Similarity=0.125 Sum_probs=271.5
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ecc--CCCccccccEEEEeccCCCeeeecCCCcHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLP 855 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~ 855 (1239)
..+.|+++|+|.++.+++.|++.++++|.+|||++|.||+| ++. ++.+...++||+|.|.+|+.++|||+.|++
T Consensus 193 ~~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~Gy~ev~tP~le~~~l~~~sg~~~~~~~~my~~~d~~~~~~~LRP~~~~~ 272 (575)
T PRK12305 193 EIGPGLPVWHPKGAIIRREIEDYLRKEHLKRGYEFVYTPHIGKSDLWKTSGHLDNYKENMFPPMEIDEEEYYLKPMNCPG 272 (575)
T ss_pred ccCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCCcccchhhcccccccCCceEEEecCCCHH
Confidence 34789999999999999999999999999999999999999 332 335577899999999999999999988888
Q ss_pred HHHHHHhCC----CCceeEEeecCeEEcCCCC-----CCCCceeEEeEEEeCCCCcccH--HHHHHHHHHHHHhcCCCCc
Q 000880 856 FIRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 856 iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~s~~aD--aEvi~la~~~l~~lgi~~~ 924 (1239)
++|+++++. ..|+|+||+|+|||+|+++ .|.+||+|+|+|+||..++.+| +|+|.++.++++.||+++
T Consensus 273 ~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~if~~~~~~~~e~~e~i~l~~~~~~~lgl~~- 351 (575)
T PRK12305 273 HILIYKSRLRSYRDLPLRLAEFGTVYRYEKSGVLHGLTRVRGFTQDDAHIFCTPDQIEDEILKVLDFVLELLKDFGFKD- 351 (575)
T ss_pred HHHHHhcccCChhhCCHhhEEecccccCCCCCCCcCcccccCeEEcceEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 899988743 3599999999999999875 2556799999999999888888 999999999999999985
Q ss_pred eEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Q 000880 925 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 1004 (1239)
Q Consensus 925 ~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~ 1004 (1239)
+.+.||++.+ .. .+|..+.|... .+.+..
T Consensus 352 ~~i~l~~r~~-~~---~~g~~~~~~~~---------------------------------------~~~l~~-------- 380 (575)
T PRK12305 352 YYLELSTREP-EK---YVGDDEVWEKA---------------------------------------TEALRE-------- 380 (575)
T ss_pred EEEEEeCCCh-hh---ccCCHHHHHHH---------------------------------------HHHHHH--------
Confidence 9999999755 21 12322211000 000000
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecC-CCCcccccccccc----cc
Q 000880 1005 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVK-EKYPATLVEGTLL----AV 1079 (1239)
Q Consensus 1005 ~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~-~~~~~~~~~~~~i----~~ 1079 (1239)
.+...|+. ...+.+ +.+||. ..|++.... .+.. -..+++ ..
T Consensus 381 -------------------------~l~~~g~~--~~~~~~---~~~~y~-~~~~~~~~d~~g~~---~~~~t~~~~~~~ 426 (575)
T PRK12305 381 -------------------------ALEELGLE--YVEDPG---GAAFYG-PKIDVQIKDALGRE---WQMSTIQLDFNL 426 (575)
T ss_pred -------------------------HHHhcCCC--cEecCC---Cccccc-ccEEEEeeccCCCc---eeccceeeeccc
Confidence 11222332 234554 778885 557774432 2321 111223 35
Q ss_pred cccccc-hhhhccccccccccCCCCCCcee---eeeccHHHHHhhCCC---CCcCCCCCCCceEEEEecCCCccHHHHHH
Q 000880 1080 GGRYDY-LLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERME 1152 (1239)
Q Consensus 1080 GGRYD~-L~~~fg~~~~~~~~g~~~~~pAv---Gfaigldrl~~~L~~---~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ 1152 (1239)
|+|||- +... .| +...|++ |++-++|||+.+|.+ +..+.+ .+|.+|+|++.+ ++...+|.+
T Consensus 427 ~~~fdl~y~~~---------~~-~~~~p~~ih~~~~G~~eRl~~~l~e~~~~~~p~~-~~p~~v~Ii~~~-~~~~~~a~~ 494 (575)
T PRK12305 427 PERFDLEYTAE---------DG-KRQRPVMIHRALFGSIERFIGILTEHYAGAFPFW-LAPVQVVIIPVA-DAHNEYAEE 494 (575)
T ss_pred HhhCCCEEECC---------CC-CccCceEEEccccccHHHHHHHHHHHhCCCCCCC-CCCccEEEEEeC-hHHHHHHHH
Confidence 689994 4322 22 2235888 777789999999852 334444 457799999996 677889999
Q ss_pred HHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHh
Q 000880 1153 LVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1230 (1239)
Q Consensus 1153 ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~ 1230 (1239)
+++.||+.|++|++++. +.++++++++|++.|+|++||+|++|.++|+|+||||.+++|.+++++++++.|++.+++
T Consensus 495 i~~~Lr~~gi~v~~d~~-~~~l~kk~~~A~~~g~p~~iivG~~E~~~~~v~vr~~~~~~q~~v~~~~l~~~l~~~~~~ 571 (575)
T PRK12305 495 VAKKLRAAGIRVEVDTS-NERLNKKIRNAQKQKIPYMLVVGDKEVEAGTVSVRTRDGEQLNGMPLDEFIELIKEKIAE 571 (575)
T ss_pred HHHHHHHCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEechhhhCCEEEEEEcCCCceeeeeHHHHHHHHHHHHhc
Confidence 99999999999998876 678999999999999999999999999999999999999999999999999999888775
No 97
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.9e-37 Score=358.63 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=211.2
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+|++++.||+|+||.||+|+++.+++.||||+++.... .......+..|..++..+ +||+|+++++++..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------- 72 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-------- 72 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--------
Confidence 68899999999999999999999999999999975432 222334567788888877 58889999887632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+|||||+ |+|.+.+.....+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 120 (323)
T cd05616 73 --------------------------------MDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK 120 (323)
T ss_pred --------------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 357899999996 69999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05616 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC---------------CccccCCCChhhcCHHHhcC-CCCCCccch
Confidence 99999999999999999999999999987432110 11234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 733 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~ 733 (1239)
|||||++|||++ ||...........+......+|. ..++++.+++.+||+.||.+|++ ..++++|+||.
T Consensus 185 wSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~ 261 (323)
T cd05616 185 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR 261 (323)
T ss_pred hchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcC
Confidence 999999999997 88766655555444443333333 45679999999999999999997 48999999999
Q ss_pred CchHHHH
Q 000880 734 QMEYELL 740 (1239)
Q Consensus 734 ~~~~~~~ 740 (1239)
...+...
T Consensus 262 ~~~~~~~ 268 (323)
T cd05616 262 YIDWEKL 268 (323)
T ss_pred CCCHHHH
Confidence 8876644
No 98
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.9e-37 Score=359.80 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=207.4
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||.||+|+++.+++.||||+++.... .......+..|..++..+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~------------- 67 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT------------- 67 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975321 223345677899998876 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|...+.....+++..++.++.||+.||.|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 120 (321)
T cd05591 68 ---------------------------KDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYR 120 (321)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 356899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (321)
T cd05591 121 DLKLDNILLDAEGHCKLADFGMCKEGILNG---------------VTTTTFCGTPDYIAPEILQE-LEYGPSVDWWALGV 184 (321)
T ss_pred CCCHHHeEECCCCCEEEeecccceecccCC---------------ccccccccCccccCHHHHcC-CCCCCccceechhH
Confidence 999999999999999999999987532111 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-------CHHHHHhccCCCCch
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-------SATELLQDALPPQME 736 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-------ta~eiL~~~~~~~~~ 736 (1239)
++|||++ ||...........+.......|. ..++++.++|++||+.||.+|| ++.++++||||....
T Consensus 185 il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~ 261 (321)
T cd05591 185 LMYEMMAGQPPFEADNEDDLFESILHDDVLYPV---WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID 261 (321)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence 9999997 88766655555444433322332 3457899999999999999999 999999999999887
Q ss_pred HHHH
Q 000880 737 YELL 740 (1239)
Q Consensus 737 ~~~~ 740 (1239)
+..+
T Consensus 262 ~~~~ 265 (321)
T cd05591 262 WVLL 265 (321)
T ss_pred HHHH
Confidence 7644
No 99
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=337.88 Aligned_cols=340 Identities=19% Similarity=0.248 Sum_probs=288.6
Q ss_pred chhhccCCCC---CCCCCcccccccccccccCCCcCcccchhhHHHHHHHHHhcccCCCcC--ccHHHHHHHHhhcCCCC
Q 000880 295 SLLQDHGSNN---DGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLT--DALPQIATELYNLGIFS 369 (1239)
Q Consensus 295 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~lc~~~~~~~--~~~~~~~~~l~~l~~~~ 369 (1239)
++++...+.| .-|.+|+-- +-| -|+ .+|++||+..++++++||++|.+| +|.+.+.+++.+++...
T Consensus 85 kll~~kadvnavnehgntplhy-acf----wgy----dqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~ 155 (448)
T KOG0195|consen 85 KLLSRKADVNAVNEHGNTPLHY-ACF----WGY----DQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKH 155 (448)
T ss_pred HHHHHhcccchhhccCCCchhh-hhh----hcH----HHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHh
Confidence 4555555544 666777221 111 133 479999999999999999999999 89999999999999999
Q ss_pred ccc-cccCCCCcchhhhhhhHHHhhhhccccccCCcCCCCCCCCCCCCCCCCcccCCceEEeeeccCCceEEEEEEEccC
Q 000880 370 ERG-RDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLD 448 (1239)
Q Consensus 370 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~ 448 (1239)
++. ++++++++.|.+ .++++++.+++..++....++.++.+|.....|+.|+|+|+
T Consensus 156 gq~~nripfkdt~wkg---------------------tktr~rdatlsr~~gid~~~lnl~tkl~e~hsgelwrgrwq-- 212 (448)
T KOG0195|consen 156 GQSPNRIPFKDTTWKG---------------------TKTRTRDATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQ-- 212 (448)
T ss_pred CCCCCccccccccccc---------------------ccccccccccccccCcchhhhhhhhhhccCCCccccccccc--
Confidence 988 789999988876 56778888999999999999999999999999999999998
Q ss_pred CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCccccccccccccccccccc
Q 000880 449 GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 528 (1239)
Q Consensus 449 g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~ 528 (1239)
|..+++|+++..+.+.+..++|..|...|+.+.||||++++++|..
T Consensus 213 gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns---------------------------------- 258 (448)
T KOG0195|consen 213 GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS---------------------------------- 258 (448)
T ss_pred CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC----------------------------------
Confidence 7889999999999998899999999999999999999999999843
Q ss_pred ccccccccEEEEEeeccC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcccEEEcCCCCEEE
Q 000880 529 QENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDARNDIKI 603 (1239)
Q Consensus 529 ~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~~~~~~~i~~qI~~gL~yLHs~g--IiHrDLKp~NILl~~~~~vKL 603 (1239)
.+++.++.+||+ |+|+.+++.... ++..++.+++.+|++||+|||+.. |....|++.+++||++.+++|
T Consensus 259 ------ppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltari 332 (448)
T KOG0195|consen 259 ------PPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARI 332 (448)
T ss_pred ------CCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhe
Confidence 467899999998 799999997665 788999999999999999999975 666789999999999998887
Q ss_pred eecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC--CCcchhhHHHHHHHHHhhc---CCchh
Q 000880 604 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTA 678 (1239)
Q Consensus 604 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~ksDIwSlGviL~ELlt---Pf~~~ 678 (1239)
+ +...+++++..+....|.||+||.++..+. .-.++|||||+|++|||.| ||.+.
T Consensus 333 s--------------------mad~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadl 392 (448)
T KOG0195|consen 333 S--------------------MADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADL 392 (448)
T ss_pred e--------------------cccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccC
Confidence 6 111233444566788999999999997554 4578999999999999997 99999
Q ss_pred HHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 000880 679 MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 727 (1239)
Q Consensus 679 ~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 727 (1239)
.+++..+++.. .+..+..+++.++.+..||+-|++.||.+||.++.|+
T Consensus 393 spmecgmkial-eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 393 SPMECGMKIAL-EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred Cchhhhhhhhh-ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 99999998876 4555556667788999999999999999999998875
No 100
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.4e-37 Score=359.23 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=206.7
Q ss_pred CceEEeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCcc
Q 000880 425 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~ 498 (1239)
+|++++.||+|+||.||+|++. .+|+.||+|++..... .......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ----- 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-----
Confidence 5899999999999999999874 4789999999974321 222345688899999999 5999999998763
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~ 120 (332)
T cd05614 76 -----------------------------------TEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEH 120 (332)
T ss_pred -----------------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2456899999996 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++||+||||||+|||++.++.+||+|||+++...... .......+||+.|||||++.+...++.
T Consensus 121 lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~ 186 (332)
T cd05614 121 LHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE--------------KERTYSFCGTIEYMAPEIIRGKGGHGK 186 (332)
T ss_pred HHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC--------------CCccccccCCccccCHHHhcCCCCCCC
Confidence 999999999999999999999999999999997542211 001234579999999999987555889
Q ss_pred chhhHHHHHHHHHhhc---CCchhH----HHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHH
Q 000880 658 KADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 725 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~e 725 (1239)
++|||||||++|||++ ||.... ............ ++.....++.+.++|.+||+.||++|| ++.+
T Consensus 187 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 263 (332)
T cd05614 187 AVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD---PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASE 263 (332)
T ss_pred ccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 9999999999999997 774321 112222222222 222234567899999999999999999 8899
Q ss_pred HHhccCCCCchHHHH
Q 000880 726 LLQDALPPQMEYELL 740 (1239)
Q Consensus 726 iL~~~~~~~~~~~~~ 740 (1239)
+++|+||....+...
T Consensus 264 ~l~h~~~~~~~~~~~ 278 (332)
T cd05614 264 IKEHPFFKGLDWEAL 278 (332)
T ss_pred HHcCCCcCCCCHHHH
Confidence 999999998765543
No 101
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=361.70 Aligned_cols=249 Identities=25% Similarity=0.410 Sum_probs=207.7
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
|.-++.||.|+||.||-|++..+.+.||||++.... .+.+..++++.||..|++++|||+|.|.|||..
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr---------- 97 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR---------- 97 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec----------
Confidence 555688999999999999999999999999997655 456677899999999999999999999999854
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....|+|||||-||-.+++.- ..++.+-++..|+.+.+.||+|||+.+.
T Consensus 98 ------------------------------e~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~ 147 (948)
T KOG0577|consen 98 ------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNR 147 (948)
T ss_pred ------------------------------cchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 344689999999888888764 3568899999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCcchhh
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKADM 661 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ksDI 661 (1239)
||||||..|||+++.|.|||+|||.|....+ .++++|||.|||||++.. .+.|+-++||
T Consensus 148 IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDv 208 (948)
T KOG0577|consen 148 IHRDIKAGNILLSEPGLVKLADFGSASIMAP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDV 208 (948)
T ss_pred HhhhccccceEecCCCeeeeccccchhhcCc-------------------hhcccCCccccchhHheeccccccCCccce
Confidence 9999999999999999999999999986432 367899999999998753 3579999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
|||||+..||.- |+.....+..+..+.. +....-.....+..+++|+..||.+-|.+|||.+++|.|+|...
T Consensus 209 WSLGITCIELAERkPPlFnMNAMSALYHIAQ-NesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 209 WSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred eeccchhhhhhhcCCCccCchHHHHHHHHHh-cCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 999999999984 6655555555555443 22211112233457899999999999999999999999998643
No 102
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.3e-37 Score=361.97 Aligned_cols=251 Identities=27% Similarity=0.371 Sum_probs=205.8
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-------------- 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-------------- 66 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--------------
Confidence 369999999999999999999999999975332 22334567889999999999999999987732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccc
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 586 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs-~gIiHr 586 (1239)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||+ +||+||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr 120 (325)
T cd05594 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120 (325)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 357899999996 5899988888889999999999999999999997 799999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05594 121 DLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGV 184 (325)
T ss_pred CCCCCeEEECCCCCEEEecCCCCeecCCCC---------------cccccccCCcccCCHHHHcc-CCCCCccccccccc
Confidence 999999999999999999999987431110 01134579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYE 738 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~ 738 (1239)
++|||++ ||...........+......+|. ..++++.+||++||+.||.+|+ ++.++++|+||.+..+.
T Consensus 185 il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 185 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred eeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999997 77655544443333333333333 4567999999999999999997 99999999999987765
Q ss_pred H
Q 000880 739 L 739 (1239)
Q Consensus 739 ~ 739 (1239)
.
T Consensus 262 ~ 262 (325)
T cd05594 262 D 262 (325)
T ss_pred H
Confidence 3
No 103
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.6e-37 Score=375.83 Aligned_cols=252 Identities=21% Similarity=0.284 Sum_probs=196.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCC------ceeeeeeeeeecC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ------HVVRYYQAWFETG 496 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hp------nIv~l~~~~~e~~ 496 (1239)
.++|+++++||+|+||+||+|.+..+++.||||+++... .....+..|+.+++.++|. +|+.++++|..
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~-- 202 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN-- 202 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc--
Confidence 368999999999999999999999999999999986322 2234556677777777554 47777766522
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
...++|+||++++++|.+++...+.+++..++.++.||+.||+
T Consensus 203 -------------------------------------~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~ 245 (467)
T PTZ00284 203 -------------------------------------ETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALD 245 (467)
T ss_pred -------------------------------------CCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 2356899999999999999988888999999999999999999
Q ss_pred HHHh-CCccccCCCcccEEEcCCC----------------CEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 000880 577 HIHG-QGIIHRDLTPNNIFFDARN----------------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 639 (1239)
Q Consensus 577 yLHs-~gIiHrDLKp~NILl~~~~----------------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 639 (1239)
|||+ .|||||||||+|||++.++ .+||+|||+++.... ..+..+|
T Consensus 246 yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~------------------~~~~~~g 307 (467)
T PTZ00284 246 YFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH------------------SRTAIVS 307 (467)
T ss_pred HHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc------------------ccccccC
Confidence 9998 5999999999999998765 499999998764210 1245689
Q ss_pred CccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccc-----------------
Q 000880 640 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV----------------- 699 (1239)
Q Consensus 640 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~----------------- 699 (1239)
|+.|+|||++.+ ..|+.++|||||||++|||++ ||......+....+....+.+|..|.
T Consensus 308 t~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 386 (467)
T PTZ00284 308 TRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ 386 (467)
T ss_pred CccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence 999999999988 579999999999999999997 77654433322211111111111110
Q ss_pred ----------------------cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 700 ----------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 700 ----------------------~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
...+.+.+||.+||+.||.+|||+.++|+||||.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY 444 (467)
T ss_pred ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence 012356799999999999999999999999999865
No 104
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-40 Score=345.96 Aligned_cols=251 Identities=26% Similarity=0.463 Sum_probs=210.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
+-|.++.+||+|+||.||+|.|+.+|+.+|||++... ...+++..|+.++.++..|++|+|||.++.+
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~-------- 100 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKH-------- 100 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccC--------
Confidence 4578899999999999999999999999999988743 2467899999999999999999999988543
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
..+|||||||+ |+..++++. +.++++.++..+++..+.||+|||..
T Consensus 101 --------------------------------sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~ 148 (502)
T KOG0574|consen 101 --------------------------------SDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL 148 (502)
T ss_pred --------------------------------CceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH
Confidence 45899999997 899999874 56799999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
.-||||||..|||++.+|++||+|||.|-.+.... ...++..|||.|||||+++. -.|+.++||
T Consensus 149 ~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVI~E-IGY~~~ADI 212 (502)
T KOG0574|consen 149 KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVIEE-IGYDTKADI 212 (502)
T ss_pred HHHHhhcccccEEEcccchhhhhhccccchhhhhH---------------HhhCccccCcccccHHHHHH-hccchhhhH
Confidence 99999999999999999999999999998764321 22356799999999999987 569999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCcc---ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~---~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
||||++..||.- |+.+-.++.....+-. ..||.+ ...+.++.++++.||-+.|++|-|+.++++|+|.++.
T Consensus 213 WSLGITaIEMAEG~PPYsDIHPMRAIFMIPT---~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 213 WSLGITAIEMAEGRPPYSDIHPMRAIFMIPT---KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred hhhcchhhhhhcCCCCcccccccceeEeccC---CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 999999999984 7766655544332222 122222 1233478899999999999999999999999999876
Q ss_pred hH
Q 000880 736 EY 737 (1239)
Q Consensus 736 ~~ 737 (1239)
+-
T Consensus 290 ~g 291 (502)
T KOG0574|consen 290 PG 291 (502)
T ss_pred Cc
Confidence 53
No 105
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.5e-37 Score=357.13 Aligned_cols=254 Identities=25% Similarity=0.379 Sum_probs=205.1
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHH---HhcCCCceeeeeeeeeecCccccC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATL---SRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL---~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
|++++.||+|+||.||+|.++.+|+.||||+++.... .......+.+|+.++ +.++||||+++++++..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~------- 73 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT------- 73 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-------
Confidence 6789999999999999999999999999999975432 222345667776655 56689999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|+|||||+ ++|...+.. ..+++..++.++.||+.||+|||+
T Consensus 74 ---------------------------------~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~ 119 (324)
T cd05589 74 ---------------------------------EDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHE 119 (324)
T ss_pred ---------------------------------CCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999996 588777754 579999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+||+||||||+|||++.++.+||+|||+++...... ......+||+.|||||++.+ ..++.++|
T Consensus 120 ~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (324)
T cd05589 120 NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG---------------DRTSTFCGTPEFLAPEVLTE-TSYTRAVD 183 (324)
T ss_pred CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC---------------CcccccccCccccCHhHhcC-CCCCcccc
Confidence 999999999999999999999999999986421110 11234679999999999987 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCC
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 732 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~ 732 (1239)
||||||++|||++ ||...................|. ..++++.++|++||+.||.+|| ++.++++|+||
T Consensus 184 iwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f 260 (324)
T cd05589 184 WWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR---FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFF 260 (324)
T ss_pred hhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCc
Confidence 9999999999996 78765555544444433333333 3467899999999999999999 79999999999
Q ss_pred CCchHHH
Q 000880 733 PQMEYEL 739 (1239)
Q Consensus 733 ~~~~~~~ 739 (1239)
....+..
T Consensus 261 ~~~~~~~ 267 (324)
T cd05589 261 RDINWDD 267 (324)
T ss_pred CCCCHHH
Confidence 9886543
No 106
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.9e-37 Score=364.22 Aligned_cols=261 Identities=24% Similarity=0.401 Sum_probs=209.0
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~------- 114 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD------- 114 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------
Confidence 4689999999999999999999999999999999974322 22234567899999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
..++|+|||||+ |+|.+++... .+++..+..++.||+.||+|||+
T Consensus 115 ---------------------------------~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~ 160 (370)
T cd05621 115 ---------------------------------DKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHS 160 (370)
T ss_pred ---------------------------------CCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 6899988654 58999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC---CCCc
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 657 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~ 657 (1239)
+||+||||||+|||++.++.+||+|||+|....... .......+||+.|||||++.+.. .++.
T Consensus 161 ~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~--------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05621 161 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeEecCCCHHHEEECCCCCEEEEecccceecccCC--------------ceecccCCCCcccCCHHHHhccCCCCCCCc
Confidence 999999999999999999999999999998643111 01123457999999999987532 3789
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC-CCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhccC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 731 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~~ 731 (1239)
++|||||||++|||++ ||...........+....... .+.....++.++++|.+||..+|.+ |+|+.++++|||
T Consensus 227 ~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 227 ECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 9999999999999996 887665554444444322221 1222345778999999999866544 899999999999
Q ss_pred CCCchHH
Q 000880 732 PPQMEYE 738 (1239)
Q Consensus 732 ~~~~~~~ 738 (1239)
|....+.
T Consensus 307 ~~~~~~~ 313 (370)
T cd05621 307 FKNDQWN 313 (370)
T ss_pred cCCCCcC
Confidence 9886543
No 107
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.5e-37 Score=357.07 Aligned_cols=250 Identities=29% Similarity=0.450 Sum_probs=204.4
Q ss_pred eeeccCCceEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 430 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+.||+|+||.||+|++. .+++.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~---------- 71 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT---------- 71 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec----------
Confidence 67999999999999874 4688999999975321 22234567889999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
...+|+||||++ ++|.+++...+.+.+..+..++.||+.||+|||++||
T Consensus 72 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 72 ------------------------------GGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred ------------------------------CCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 356899999996 5999999888889999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||
T Consensus 122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diws 185 (323)
T cd05584 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---------------TVTHTFCGTIEYMAPEILMR-SGHGKAVDWWS 185 (323)
T ss_pred ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------CcccccCCCccccChhhccC-CCCCCcceecc
Confidence 999999999999999999999999987431110 01133579999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCc
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQM 735 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~ 735 (1239)
|||++|||++ ||..................+|+ ..++++.+||++||+.||.+|| ++.++++|+||...
T Consensus 186 lG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 186 LGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP---YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred cHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999997 77665554444444433333333 3567899999999999999999 89999999999887
Q ss_pred hHH
Q 000880 736 EYE 738 (1239)
Q Consensus 736 ~~~ 738 (1239)
.+.
T Consensus 263 ~~~ 265 (323)
T cd05584 263 NWD 265 (323)
T ss_pred CHH
Confidence 654
No 108
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.3e-37 Score=356.18 Aligned_cols=252 Identities=27% Similarity=0.417 Sum_probs=203.0
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||.||+|++..+++.||||+++.... .......+..|..++..+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~------------- 67 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT------------- 67 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975321 122334566677777654 89999999987632
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~ 120 (316)
T cd05592 68 ---------------------------KEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYR 120 (316)
T ss_pred ---------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 357899999996 6999999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05592 121 DLKLDNVLLDKDGHIKIADFGMCKENMNGE---------------GKASTFCGTPDYIAPEILKG-QKYNESVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEEccCcCCeECCCCC---------------CccccccCCccccCHHHHcC-CCCCCcccchhHHH
Confidence 999999999999999999999997532111 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-HHHHhccCCCCchHHHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELL 740 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-~eiL~~~~~~~~~~~~~ 740 (1239)
++|||++ ||......+...........+| ...+.++.+||.+||+.||.+||++ .++++|+||....+..+
T Consensus 185 il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~ 259 (316)
T cd05592 185 LLYEMLIGQSPFHGEDEDELFDSILNDRPHFP---RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWERL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCHHHH
Confidence 9999996 8876655544444333222222 3356789999999999999999986 58889999998876644
No 109
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.8e-37 Score=357.79 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=202.8
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||.||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~------------- 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-------------
Confidence 369999999999999999999999999985432 223345688899999998 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05588 68 ---------------------------ESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 357899999996 5899998888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05588 121 DLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHeEECCCCCEEECcCccccccccCC---------------CccccccCCccccCHHHHcC-CCCCCccceechHH
Confidence 999999999999999999999987421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchh--------HHHHHHHHhhh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCCC------HHHHHh
Q 000880 667 VFFELWH---PFSTA--------MERQIVLSDLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 728 (1239)
Q Consensus 667 iL~ELlt---Pf~~~--------~~~~~~~~~~~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------a~eiL~ 728 (1239)
++|||++ ||... .........+. ....+| ...++++.++|++||+.||.+||| +.++++
T Consensus 185 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 185 LMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 9999996 77421 11111222222 122233 245678999999999999999987 799999
Q ss_pred ccCCCCchHHHH
Q 000880 729 DALPPQMEYELL 740 (1239)
Q Consensus 729 ~~~~~~~~~~~~ 740 (1239)
||||....+...
T Consensus 262 hp~~~~~~~~~~ 273 (329)
T cd05588 262 HPFFRNIDWDLL 273 (329)
T ss_pred CCCCCCCCHHHH
Confidence 999998876644
No 110
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.6e-37 Score=355.88 Aligned_cols=252 Identities=27% Similarity=0.374 Sum_probs=203.7
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||.||+|+++.+|+.||||+++.... .......+..|..++..+ +||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~------------- 67 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT------------- 67 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-------------
Confidence 369999999999999999999999999975321 122345567788888754 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
..++|+|||||+ ++|..++.....+++..+..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHr 120 (316)
T cd05620 68 ---------------------------KEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120 (316)
T ss_pred ---------------------------CCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (316)
T cd05620 121 DLKLDNVMLDRDGHIKIADFGMCKENVFGD---------------NRASTFCGTPDYIAPEILQG-LKYTFSVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEeCccCCCeecccCC---------------CceeccCCCcCccCHHHHcC-CCCCcccchhhhHH
Confidence 999999999999999999999986421100 01234679999999999987 57899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-HHHHhccCCCCchHHHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELL 740 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-~eiL~~~~~~~~~~~~~ 740 (1239)
++|||++ ||...................| ...++++.+||.+||..||.+||++ +++++|+||....+...
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~~~ 259 (316)
T cd05620 185 LLYEMLIGQSPFHGDDEDELFESIRVDTPHYP---RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWTAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCHHHH
Confidence 9999996 7876555444333322222222 2356789999999999999999997 58899999999876644
No 111
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=358.26 Aligned_cols=248 Identities=27% Similarity=0.397 Sum_probs=201.6
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
+++.+...||+|.||+||+|+|- -.||||+++....+.+..+.|.+||.+|++-+|.||+=+.|+|..+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-------- 460 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-------- 460 (678)
T ss_pred HHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC--------
Confidence 45667889999999999999997 3799999999888888899999999999999999999999998543
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
.+.||+.+|.| +|+.+++-. ..|+....+.|++||+.||.|||.+
T Consensus 461 ---------------------------------~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK 507 (678)
T KOG0193|consen 461 ---------------------------------PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK 507 (678)
T ss_pred ---------------------------------ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh
Confidence 23899999986 899999744 5699999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCcch
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 659 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 659 (1239)
+|||||||+.|||+.++++|||+|||++.........++. ....|...|||||++.. ...|++.+
T Consensus 508 ~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~-------------~qp~gsilwmAPEvIRmqd~nPfS~qS 574 (678)
T KOG0193|consen 508 NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL-------------EQPHGSLLWMAPEVIRMQDDNPFSFQS 574 (678)
T ss_pred hhhhhhccccceEEccCCcEEEecccceeeeeeecccccc-------------CCCccchhhhcHHHHhhcccCCCCccc
Confidence 9999999999999999999999999999865433211111 22358889999998753 24589999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc--CCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
|||||||++|||++ ||......++....-+.. .........+..++++|+..||..++++||.+.+||.
T Consensus 575 DVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 575 DVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred chhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 99999999999998 888444444433222210 1111223344458999999999999999999999986
No 112
>PRK12444 threonyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=1.7e-36 Score=380.23 Aligned_cols=350 Identities=13% Similarity=0.091 Sum_probs=277.5
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ecc--CCCccccccEEEEeccCCCeeeecCCCcHHH
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 856 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~i 856 (1239)
...|+++|+|.+..+++.|++.+++.+.++||++|.||+| ++. ++.+...++|| +.|.+|+.++|||+.|+++
T Consensus 262 ~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sG~~~~~~~emy-~~d~~~~~~~LrP~~~~~~ 340 (639)
T PRK12444 262 EAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWERSGHWDHYKDNMY-FSEVDNKSFALKPMNCPGH 340 (639)
T ss_pred ccCcceEEeeCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCChhhhhhhcC-eecCCCcEEEEccCCCHHH
Confidence 4689999999999999999999999999999999999999 222 33567789999 8899999999999999999
Q ss_pred HHHHHhCC----CCceeEEeecCeEEcCCCC---C--CCCceeEEeEEEeCCCCcccHHH---HHHHHHHHHHhcCCCCc
Q 000880 857 IRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 857 aR~~~~~~----~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~s~~aDaE---vi~la~~~l~~lgi~~~ 924 (1239)
+|++.... ..|+|+||+|+|||+|+++ + |.++|+|.|+|+||..+. +++| ++.++.++++.||+ +
T Consensus 341 ~~~~~~~~~sy~~LP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~d~~~f~~~~~-~~~e~~~~~~~~~~i~~~lgl-~- 417 (639)
T PRK12444 341 MLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPDQ-IEDEIKSVMAQIDYVYKTFGF-E- 417 (639)
T ss_pred HHHHhCcccChhhCCceeEEeccccCCCCCcCCcCcceeeeeEEccEEEECCHHH-HHHHHHHHHHHHHHHHHHcCC-c-
Confidence 99886532 3499999999999999976 3 556799999999998766 6666 99999999999999 3
Q ss_pred eEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Q 000880 925 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 1004 (1239)
Q Consensus 925 ~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~ 1004 (1239)
+.+.++++. -+.+|-++.|.... ..+..
T Consensus 418 ~~~~~~~r~-----~~~~G~~e~~~~~~---------------------------------------~~l~~-------- 445 (639)
T PRK12444 418 YEVELSTRP-----EDSMGDDELWEQAE---------------------------------------ASLEN-------- 445 (639)
T ss_pred EEEEEECCc-----cccCCCHHHHHHHH---------------------------------------HHHHH--------
Confidence 999998852 12344433321110 00101
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCccccccccccccccccc
Q 000880 1005 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1084 (1239)
Q Consensus 1005 ~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD 1084 (1239)
.|...|+ .+.+|++ ||. || |++|++.....+ .+...|+|||||
T Consensus 446 -------------------------~l~~~~~--~y~~~~~--~ga-~Y-~~~~e~~~~~~~------~~~~~~~t~~~d 488 (639)
T PRK12444 446 -------------------------VLQSLNY--KYRLNEG--DGA-FY-GPKIDFHIKDAL------NRSHQCGTIQLD 488 (639)
T ss_pred -------------------------HHHHcCC--CceeccC--Ccc-cc-cceEEEEeecCC------CChhcccceeee
Confidence 2233344 3567877 888 99 999999876532 234799999999
Q ss_pred c-hhhhccccccccccCCCCCCceee---eeccHHHHHhhC-CC--CCcCCCCCCCceEEEEecCCC-ccHHHHHHHHHH
Q 000880 1085 Y-LLHRMWDREYVGYASRTNPPSGVG---ASLALETIIQHY-PV--DFKPVRNEAGTSVLVCSRGGG-GLLVERMELVAE 1156 (1239)
Q Consensus 1085 ~-L~~~fg~~~~~~~~g~~~~~pAvG---faigldrl~~~L-~~--~~~~~~~~~~~~v~v~~~~~~-~~~~~a~~ia~~ 1156 (1239)
. |-++|+-. +....| +...|++| |+.++|||+.+| +. +..|.+ .++.+|+|++.+ + .....|+++++.
T Consensus 489 ~~~~~~f~l~-~~~~~g-~~~~P~i~~~~~~g~ieRli~~L~e~~~~~~p~~-~ap~qV~Ii~~~-~~~~~~~a~~la~~ 564 (639)
T PRK12444 489 FQMPEKFDLN-YIDEKN-EKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAW-LAPVQVKVIPVS-NAVHVQYADEVADK 564 (639)
T ss_pred cccccccceE-EECCCC-CccccEEEEECCCCCHHHHHHHHHHhcCCCCCCc-cCCceEEEEEcc-cHHHHHHHHHHHHH
Confidence 8 33444321 122222 33579999 788999999887 42 334433 368899999986 5 578999999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHh
Q 000880 1157 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1230 (1239)
Q Consensus 1157 Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~ 1230 (1239)
||+.|++|+++.. .+++++++++|++.|++++++||++|.++|+|+||+|.+++|..++++++++.+++.+++
T Consensus 565 LR~~Gi~veid~~-~~sl~kq~k~A~k~g~~~~iiiG~~E~~~~~v~vr~~~t~~q~~i~l~el~~~l~~~~~~ 637 (639)
T PRK12444 565 LAQAGIRVERDER-DEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYGEEKSEVIELDMFVESIKEEIKN 637 (639)
T ss_pred HHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCeEEEEECCCCceeeeeHHHHHHHHHHHhhc
Confidence 9999999998776 679999999999999999999999999999999999999999999999999999887764
No 113
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=360.04 Aligned_cols=237 Identities=27% Similarity=0.404 Sum_probs=198.2
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
....++-||.|+-|.||+|+.+ ++.||||+++- .-..+++-|++|+||||+.+.|+|..
T Consensus 125 ~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~e---------lkETdIKHLRkLkH~NII~FkGVCtq---------- 183 (904)
T KOG4721|consen 125 EISELEWLGSGAQGAVFLGRLH--NETVAVKKVRE---------LKETDIKHLRKLKHPNIITFKGVCTQ---------- 183 (904)
T ss_pred HhhhhhhhccCcccceeeeecc--CceehhHHHhh---------hhhhhHHHHHhccCcceeeEeeeecC----------
Confidence 3445677999999999999987 89999997652 11246888999999999999999833
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
.+.++||||||. |-|..+|.....++......+..+|+.||.|||.+.|
T Consensus 184 ------------------------------sPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKI 233 (904)
T KOG4721|consen 184 ------------------------------SPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKI 233 (904)
T ss_pred ------------------------------CceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhH
Confidence 467899999996 7999999999999999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
||||||+-||||..+..|||+|||.++...... +..+++||..|||||++.+ ...+.|+||||
T Consensus 234 IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S----------------TkMSFaGTVaWMAPEvIrn-ePcsEKVDIwS 296 (904)
T KOG4721|consen 234 IHRDLKSPNILISYDDVVKISDFGTSKELSDKS----------------TKMSFAGTVAWMAPEVIRN-EPCSEKVDIWS 296 (904)
T ss_pred hhhccCCCceEeeccceEEeccccchHhhhhhh----------------hhhhhhhhHhhhCHHHhhc-CCcccccceeh
Confidence 999999999999999999999999998764321 2356899999999999998 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 730 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 730 (1239)
|||+||||+| ||.+.....+....-. +....+-...++..++-||+.||+..|..||++.+||.|-
T Consensus 297 fGVVLWEmLT~EiPYkdVdssAIIwGVGs-NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 297 FGVVLWEMLTGEIPYKDVDSSAIIWGVGS-NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred hHHHHHHHHhcCCCccccchheeEEeccC-CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 9999999998 8876655444332211 1122233445666888999999999999999999999983
No 114
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.7e-37 Score=358.19 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=195.5
Q ss_pred CCceEEeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~ 497 (1239)
++|++.+.||+|+||.||+|.+. .++..||||+++.. ........+.+|+.+|+.+ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-- 83 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC--
Confidence 57899999999999999999863 34578999998743 2333456789999999999 899999999987432
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--------------------
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 556 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 556 (1239)
...+|++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 126 (338)
T cd05102 84 -------------------------------------NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRA 126 (338)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhh
Confidence 235799999996 6999888642
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEE
Q 000880 557 ------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 594 (1239)
Q Consensus 557 ------------------------------------------~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NIL 594 (1239)
..+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil 206 (338)
T cd05102 127 MVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNIL 206 (338)
T ss_pred hhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEE
Confidence 23778888999999999999999999999999999999
Q ss_pred EcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc-
Q 000880 595 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 673 (1239)
Q Consensus 595 l~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt- 673 (1239)
++.++.+||+|||+++....... ........+|+.|+|||++.+ ..++.++|||||||+||||++
T Consensus 207 ~~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~el~~~ 272 (338)
T cd05102 207 LSENNVVKICDFGLARDIYKDPD-------------YVRKGSARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSL 272 (338)
T ss_pred EcCCCcEEEeecccccccccCcc-------------hhcccCCCCCccccCcHHhhc-CCCCcccCHHHHHHHHHHHHhC
Confidence 99999999999999986421110 011123456789999999987 568999999999999999984
Q ss_pred ---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 674 ---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 674 ---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
||............+. .+..+......++++.++|.+||+.||.+|||+.++++
T Consensus 273 g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 273 GASPYPGVQINEEFCQRLK-DGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCCCCCccHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 7765433332222222 22223333456678999999999999999999999986
No 115
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.3e-36 Score=372.25 Aligned_cols=267 Identities=27% Similarity=0.421 Sum_probs=215.8
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|.+.+.||+|+||+||+|++..+|+.||||++.....+......+.+|+.++..++|+||++++..+.....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~----- 105 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP----- 105 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc-----
Confidence 468999999999999999999999999999999998766655566778999999999999999998877643210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~~~~~~~i~~qI~~gL~y 577 (1239)
........+++||||++ |+|.+++... ..+++..++.++.||+.||.|
T Consensus 106 ---------------------------~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~ 158 (496)
T PTZ00283 106 ---------------------------RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHH 158 (496)
T ss_pred ---------------------------cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 00112345789999996 6999988643 468999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||+++|+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.
T Consensus 159 lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~-------------~~~~~~~~Gt~~Y~aPE~~~~-~~~s~ 224 (496)
T PTZ00283 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVS-------------DDVGRTFCGTPYYVAPEIWRR-KPYSK 224 (496)
T ss_pred HHhCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccc-------------ccccccccCCcceeCHHHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 001234689999999999987 56899
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
++|||||||++|||++ ||.............. +..++.....++++.++|.+||+.||.+||++.++++|||++.
T Consensus 225 k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 225 KADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA--GRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999997 8876555444443332 2233334456789999999999999999999999999998776
Q ss_pred chH
Q 000880 735 MEY 737 (1239)
Q Consensus 735 ~~~ 737 (1239)
...
T Consensus 303 ~~~ 305 (496)
T PTZ00283 303 FIS 305 (496)
T ss_pred hhh
Confidence 543
No 116
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1e-36 Score=355.24 Aligned_cols=264 Identities=24% Similarity=0.417 Sum_probs=211.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++++.||+|+||+||+++++.+++.||||++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------- 72 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-------- 72 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec--------
Confidence 479999999999999999999999999999999974321 22234568889999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
..++|+|||||+ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (331)
T cd05597 73 --------------------------------ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ 120 (331)
T ss_pred --------------------------------CCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 457899999995 699999976 4579999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 656 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 656 (1239)
+||+||||||+|||++.++.+||+|||++........ ......+||+.|||||++.+ ...++
T Consensus 121 ~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05597 121 LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--------------VQSNVAVGTPDYISPEILQAMEDGKGRYG 186 (331)
T ss_pred CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--------------ccccceeccccccCHHHHhhccccccCCC
Confidence 9999999999999999999999999999875422110 01123479999999999863 24578
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhc
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 729 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~ 729 (1239)
.++|||||||++|||++ ||......+....+.... ..+++.....+++++++|++||+.++.+ ||++.++++|
T Consensus 187 ~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 89999999999999996 886655444443333222 2344555556789999999998765444 8899999999
Q ss_pred cCCCCchHHHHH
Q 000880 730 ALPPQMEYELLD 741 (1239)
Q Consensus 730 ~~~~~~~~~~~~ 741 (1239)
|||....+....
T Consensus 267 p~~~~~~~~~~~ 278 (331)
T cd05597 267 PFFEGIDWDNIR 278 (331)
T ss_pred CCCCCCCHHHHh
Confidence 999988766543
No 117
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.2e-37 Score=358.77 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=206.5
Q ss_pred eeeccCCceEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcC
Q 000880 430 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 506 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~ 506 (1239)
+.||+|+||.||++++. .+|+.||+|+++...........+.+|+.+|++++||||++++++|..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------ 69 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT------------ 69 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc------------
Confidence 57999999999999873 578999999997543333334567889999999999999999988732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 000880 507 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585 (1239)
Q Consensus 507 ~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiH 585 (1239)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||++||+|
T Consensus 70 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 121 (318)
T cd05582 70 ----------------------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 121 (318)
T ss_pred ----------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 357899999996 699999988888999999999999999999999999999
Q ss_pred cCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHH
Q 000880 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 665 (1239)
Q Consensus 586 rDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 665 (1239)
|||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||||
T Consensus 122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG 185 (318)
T cd05582 122 RDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFG 185 (318)
T ss_pred CCCCHHHeEECCCCcEEEeeccCCcccCCCC---------------CceecccCChhhcCHHHHcC-CCCCCccceeccc
Confidence 9999999999999999999999987542110 01234579999999999987 5689999999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCCCchH
Q 000880 666 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 737 (1239)
Q Consensus 666 viL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~~~~~ 737 (1239)
|++|||++ ||...........+......+|. ..++++.+||++||+.||.+||+ +.+++.|+||....+
T Consensus 186 ~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 186 VLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ---FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred eEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 99999997 77765555544444433333333 34678999999999999999999 788999999998875
Q ss_pred HH
Q 000880 738 EL 739 (1239)
Q Consensus 738 ~~ 739 (1239)
..
T Consensus 263 ~~ 264 (318)
T cd05582 263 NK 264 (318)
T ss_pred HH
Confidence 53
No 118
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.9e-37 Score=355.26 Aligned_cols=252 Identities=27% Similarity=0.405 Sum_probs=206.5
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~------------- 67 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT------------- 67 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975421 223345677899999888 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|...+.....+++..+..++.||+.||.|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~ 120 (318)
T cd05570 68 ---------------------------KDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120 (318)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEcc
Confidence 357899999996 5899999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslGv 184 (318)
T cd05570 121 DLKLDNVLLDSEGHIKIADFGMCKEGILGG---------------VTTSTFCGTPDYIAPEILSY-QPYGPAVDWWALGV 184 (318)
T ss_pred CCCHHHeEECCCCcEEecccCCCeecCcCC---------------CcccceecCccccCHHHhcC-CCCCcchhhhhHHH
Confidence 999999999999999999999986421110 01133579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhccCCCCchHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPPQMEYE 738 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~~~~~~~~~~ 738 (1239)
++|+|++ ||...........+.......|. ..++++.+||++||..||.+|||+ .++++|+|+....+.
T Consensus 185 il~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~ 261 (318)
T cd05570 185 LLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR---WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWD 261 (318)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC---cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999996 88665554444443333333332 356789999999999999999999 999999999998765
Q ss_pred HH
Q 000880 739 LL 740 (1239)
Q Consensus 739 ~~ 740 (1239)
..
T Consensus 262 ~~ 263 (318)
T cd05570 262 KL 263 (318)
T ss_pred HH
Confidence 43
No 119
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.5e-37 Score=356.18 Aligned_cols=253 Identities=23% Similarity=0.376 Sum_probs=202.8
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++..+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~------------- 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-------------
Confidence 369999999999999999999999999975432 233445678899988877 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05618 68 ---------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence 357899999996 5898888888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05618 121 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHEEECCCCCEEEeeCCccccccCCC---------------CccccccCCccccCHHHHcC-CCCCCccceecccH
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchh--------HHHHHHHHh-hhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC------HHHHHh
Q 000880 667 VFFELWH---PFSTA--------MERQIVLSD-LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 728 (1239)
Q Consensus 667 iL~ELlt---Pf~~~--------~~~~~~~~~-~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------a~eiL~ 728 (1239)
++|||++ ||... ......... ......+| ...++.+.++|++||+.||.+||+ +.++++
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 185 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 9999997 77411 111111222 22222233 345678999999999999999998 589999
Q ss_pred ccCCCCchHHHHH
Q 000880 729 DALPPQMEYELLD 741 (1239)
Q Consensus 729 ~~~~~~~~~~~~~ 741 (1239)
||||.+..+....
T Consensus 262 hp~f~~~~~~~~~ 274 (329)
T cd05618 262 HPFFRNVDWDLME 274 (329)
T ss_pred CCCCCCCCHHHHH
Confidence 9999998776543
No 120
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1e-36 Score=354.17 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=210.2
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+|+..+.||+|+||+||+|+++.+|+.||||+++.... .......+..|..+++.+. ||+|+++++++..
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------- 72 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-------- 72 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec--------
Confidence 47888999999999999999999999999999975321 2223456778999998886 5677778776632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+|||||+ ++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~ 120 (323)
T cd05615 73 --------------------------------VDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR 120 (323)
T ss_pred --------------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 357899999996 69999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05615 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG---------------VTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CeeccCCCHHHeEECCCCCEEEeccccccccCCCC---------------ccccCccCCccccCHHHHcC-CCCCCccch
Confidence 99999999999999999999999999987432110 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 733 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~ 733 (1239)
|||||++|||++ ||...........+.......|. ..++++.+++.+||+.||.+|++ ..++++|+||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~ 261 (323)
T cd05615 185 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFR 261 (323)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccC
Confidence 999999999997 88766555555444443333333 35678999999999999999997 57999999999
Q ss_pred CchHHHHH
Q 000880 734 QMEYELLD 741 (1239)
Q Consensus 734 ~~~~~~~~ 741 (1239)
...+....
T Consensus 262 ~~~~~~~~ 269 (323)
T cd05615 262 RIDWDKLE 269 (323)
T ss_pred CCCHHHHh
Confidence 98776443
No 121
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.6e-36 Score=344.63 Aligned_cols=253 Identities=29% Similarity=0.478 Sum_probs=202.8
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++++.||.|+||.||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ---------- 70 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee----------
Confidence 5889999999999999999999999999999987654443445678899999999999999999998743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 ------------------------------~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 120 (285)
T cd07861 71 ------------------------------ESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR 120 (285)
T ss_pred ------------------------------CCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999999998888643 4589999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 121 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 185 (285)
T cd07861 121 RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV---------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDI 185 (285)
T ss_pred CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---------------ccccCCcccccccChHHhcCCCCcCcHHHH
Confidence 99999999999999999999999999997542111 011334678999999998775567899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhc--------------------------CCCCCccccCCHHHHHHHHHc
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK--------------------------GELPPSWVAKFSEQESLLRRL 712 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~--------------------------~~~p~~~~~~~~e~~~LI~~~ 712 (1239)
|||||++|+|++ ||................ ..........++++.++|++|
T Consensus 186 ~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (285)
T cd07861 186 WSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKM 265 (285)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHH
Confidence 999999999997 665433222211111100 000111233567889999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 000880 713 MSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~ 732 (1239)
|+.||.+|||+.+++.|+||
T Consensus 266 l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 266 LIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hcCChhhCCCHHHHhcCCCC
Confidence 99999999999999999997
No 122
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=7.6e-37 Score=347.39 Aligned_cols=253 Identities=30% Similarity=0.493 Sum_probs=201.1
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||+|+||.||+|+++.+|+.||+|.++...........+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~---------- 70 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS---------- 70 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc----------
Confidence 4788999999999999999999999999999997654443344568889999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
...+|++|||++++|.+++.. ...+++..++.++.||+.||.|||++||
T Consensus 71 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 120 (284)
T cd07839 71 ------------------------------DKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV 120 (284)
T ss_pred ------------------------------CCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 356899999999999888765 4679999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws 185 (284)
T cd07839 121 LHRDLKPQNLLINKNGELKLADFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185 (284)
T ss_pred ecCCCCHHHEEEcCCCcEEECccchhhccCCCC---------------CCcCCCccccCCcChHHHhCCcccCcHHHHHH
Confidence 999999999999999999999999997542211 01123467899999999877556799999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhh------------------cCCCC---------CccccCCHHHHHHHHHcc
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQ------------------KGELP---------PSWVAKFSEQESLLRRLM 713 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~------------------~~~~p---------~~~~~~~~e~~~LI~~~L 713 (1239)
|||++|+|++ ||............+.. ....+ ......++++.++|.+||
T Consensus 186 lG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07839 186 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLL 265 (284)
T ss_pred HHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHh
Confidence 9999999996 54332222111111100 00000 011234568899999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 000880 714 SPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~~~~ 732 (1239)
+.||.+|||+++++.|+||
T Consensus 266 ~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 266 VCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cCChhhcCCHHHHhcCCCC
Confidence 9999999999999999997
No 123
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.2e-37 Score=361.21 Aligned_cols=262 Identities=24% Similarity=0.382 Sum_probs=209.8
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~------- 114 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD------- 114 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-------
Confidence 4799999999999999999999999999999999875332 22234567889999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
..++|+|||||+ ++|.+++.. ..+++..+..++.||+.||+|||+
T Consensus 115 ---------------------------------~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~ 160 (371)
T cd05622 115 ---------------------------------DRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS 160 (371)
T ss_pred ---------------------------------CCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 589888865 458999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC---CCCc
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 657 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~ 657 (1239)
+||+||||||+|||++.++++||+|||+++...... .......+||+.|||||++.+.. .++.
T Consensus 161 ~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~ 226 (371)
T cd05622 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (371)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC--------------cccccCcccCccccCHHHHhccCCCccCCC
Confidence 999999999999999999999999999998643211 01123467999999999987532 3789
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC-CCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhccC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 731 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~~ 731 (1239)
++|||||||++|||++ ||...........+....... .+.....++.++++|.+||..++.+ |+++.++++|+|
T Consensus 227 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred ccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 9999999999999996 887665544444443322222 2233456789999999999854443 789999999999
Q ss_pred CCCchHHH
Q 000880 732 PPQMEYEL 739 (1239)
Q Consensus 732 ~~~~~~~~ 739 (1239)
|.+..+..
T Consensus 307 ~~~~~~~~ 314 (371)
T cd05622 307 FKNDQWAW 314 (371)
T ss_pred cCCCChhH
Confidence 98876544
No 124
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.1e-37 Score=353.87 Aligned_cols=252 Identities=27% Similarity=0.402 Sum_probs=203.4
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||+||+|+++.+++.||||+++.... .......+..|..+++.+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~------------- 67 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT------------- 67 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-------------
Confidence 369999999999999999999999999975421 122334567788888764 99999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+||||++ |+|.+++.....+++.++..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHr 120 (316)
T cd05619 68 ---------------------------KENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120 (316)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeC
Confidence 356899999996 6999999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05619 121 DLKLDNILLDTDGHIKIADFGMCKENMLGD---------------AKTCTFCGTPDYIAPEILLG-QKYNTSVDWWSFGV 184 (316)
T ss_pred CCCHHHEEECCCCCEEEccCCcceECCCCC---------------CceeeecCCccccCHHHHcC-CCCCchhhhhhHHH
Confidence 999999999999999999999987421110 01134579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH-HHHhccCCCCchHHHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPPQMEYELL 740 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~-eiL~~~~~~~~~~~~~ 740 (1239)
++|||++ ||......+............|. ..+.++.++|.+||+.||.+||++. ++++||||....+..+
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~ 259 (316)
T cd05619 185 LLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPR---WLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWSAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHHHH
Confidence 9999997 77665554443333222222222 3456899999999999999999996 8999999999876543
No 125
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=5.8e-37 Score=356.08 Aligned_cols=251 Identities=26% Similarity=0.394 Sum_probs=202.6
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||+||+|+++.+|+.||||++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~------------- 67 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-------------
Confidence 369999999999999999999999999975322 1222344555555 5678999999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~ 120 (323)
T cd05575 68 ---------------------------ADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYR 120 (323)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 357899999996 5899999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (323)
T cd05575 121 DLKPENILLDSQGHVVLTDFGLCKEGIEHS---------------KTTSTFCGTPEYLAPEVLRK-QPYDRTVDWWCLGA 184 (323)
T ss_pred CCCHHHeEECCCCcEEEeccCCCcccccCC---------------CccccccCChhhcChhhhcC-CCCCccccccccch
Confidence 999999999999999999999987431110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchHHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYEL 739 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~~~ 739 (1239)
++|||++ ||......+....+.......++ ..++.+.++|++||+.||.+||++ .++++|+||....+..
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~ 261 (323)
T cd05575 185 VLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP---NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDD 261 (323)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 9999997 88765554444444433333333 346789999999999999999987 6999999999877643
No 126
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.2e-36 Score=354.74 Aligned_cols=264 Identities=23% Similarity=0.386 Sum_probs=212.6
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++++.||+|+||.||+++++.+++.||+|++..... .......+.+|+.++..++||||+++++++..
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------- 72 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-------- 72 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec--------
Confidence 479999999999999999999999999999999864321 22233457889999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|+|||||+ |+|.+++.. ...+++..++.++.||+.||.|||+
T Consensus 73 --------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~ 120 (332)
T cd05623 73 --------------------------------ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120 (332)
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 699999976 4679999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 656 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 656 (1239)
+||+||||||+|||++.++.+||+|||++....... .......+||+.|+|||++.+ ...++
T Consensus 121 ~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (332)
T cd05623 121 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--------------TVQSSVAVGTPDYISPEILQAMEDGKGKYG 186 (332)
T ss_pred CCeEecCCCHHHEEECCCCCEEEeecchheecccCC--------------cceecccccCccccCHHHHhccccCCCCCC
Confidence 999999999999999999999999999987542111 011233579999999999863 24588
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhc
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 729 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~ 729 (1239)
.++|||||||++|||++ ||......+....+.... ..+|......++++.+||++||+.+|.+ |+++.++++|
T Consensus 187 ~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 99999999999999996 887665555544443322 2345555567889999999999765554 7899999999
Q ss_pred cCCCCchHHHHH
Q 000880 730 ALPPQMEYELLD 741 (1239)
Q Consensus 730 ~~~~~~~~~~~~ 741 (1239)
+||.+..+..+.
T Consensus 267 ~~f~~~~~~~~~ 278 (332)
T cd05623 267 PFFTGIDWDNIR 278 (332)
T ss_pred CCcCCCCHHHHh
Confidence 999998876543
No 127
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.2e-36 Score=347.21 Aligned_cols=258 Identities=24% Similarity=0.393 Sum_probs=206.2
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+++|++++.||.|+||.||+|+++.+++.||+|.++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-------- 75 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-------- 75 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEec--------
Confidence 57899999999999999999999999999999998754322 223467789999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (301)
T cd07873 76 --------------------------------EKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR 123 (301)
T ss_pred --------------------------------CCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999999999888754 4689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 124 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 188 (301)
T cd07873 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDM 188 (301)
T ss_pred CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC---------------CcccccceeecccCcHHHhCCCCCccHHHH
Confidence 99999999999999999999999999997532111 011234678999999998775568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhc-------------------CCCCC--------ccccCCHHHHHHHHH
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK-------------------GELPP--------SWVAKFSEQESLLRR 711 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~-------------------~~~p~--------~~~~~~~e~~~LI~~ 711 (1239)
|||||++|||++ ||......+......... ...|. .....++.+++||.+
T Consensus 189 ~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (301)
T cd07873 189 WGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSK 268 (301)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHH
Confidence 999999999997 665443322221111100 00110 112346688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 000880 712 LMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||+.||.+|||+.++++|+||....
T Consensus 269 ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 269 LLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred HhcCCcccCcCHHHHhcCccccccc
Confidence 9999999999999999999998775
No 128
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.3e-36 Score=345.58 Aligned_cols=249 Identities=28% Similarity=0.419 Sum_probs=198.1
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCc
Q 000880 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 510 (1239)
Q Consensus 432 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~ 510 (1239)
||+|+||+||+|.++.+|+.||||++...... ......+..|+.+++.++||||+++++++..
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~---------------- 64 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT---------------- 64 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC----------------
Confidence 79999999999999999999999998754322 1233567889999999999999999887632
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 000880 511 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585 (1239)
Q Consensus 511 ~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~yLHs~gIiH 585 (1239)
...+|+|||||+ ++|.+.+.. ...+++..++.++.||+.||+|||++||+|
T Consensus 65 ------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 120 (280)
T cd05608 65 ------------------------KTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120 (280)
T ss_pred ------------------------CCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 356899999996 588877642 346999999999999999999999999999
Q ss_pred cCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHH
Q 000880 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 665 (1239)
Q Consensus 586 rDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 665 (1239)
|||||+|||++.++.+||+|||++..+.... .......||+.|+|||++.+ ..++.++||||||
T Consensus 121 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslG 184 (280)
T cd05608 121 RDLKPENVLLDNDGNVRISDLGLAVELKDGQ---------------SKTKGYAGTPGFMAPELLQG-EEYDFSVDYFALG 184 (280)
T ss_pred CCCCHHHEEECCCCCEEEeeCccceecCCCC---------------ccccccCCCcCccCHHHhcC-CCCCccccHHHHH
Confidence 9999999999999999999999997543211 01133579999999999987 5789999999999
Q ss_pred HHHHHhhc---CCchhHHH----HHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCC
Q 000880 666 IVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 733 (1239)
Q Consensus 666 viL~ELlt---Pf~~~~~~----~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~ 733 (1239)
|++|||++ ||...... .......... .......++++.+++.+||+.||.+|| +++++++||||.
T Consensus 185 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~ 261 (280)
T cd05608 185 VTLYEMIAARGPFRARGEKVENKELKQRILNDS---VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFR 261 (280)
T ss_pred HHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC---CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhh
Confidence 99999996 77643221 1111111111 112234567899999999999999999 889999999999
Q ss_pred CchHHH
Q 000880 734 QMEYEL 739 (1239)
Q Consensus 734 ~~~~~~ 739 (1239)
...+..
T Consensus 262 ~~~~~~ 267 (280)
T cd05608 262 DLNWRQ 267 (280)
T ss_pred cCCHhH
Confidence 877653
No 129
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-36 Score=352.91 Aligned_cols=255 Identities=25% Similarity=0.386 Sum_probs=205.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||.|+||.||+|.++.+|..+|+|++.... .......+.+|+.+++.++||||++++++|..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 74 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 74 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE--------
Confidence 368999999999999999999999999999999987542 33445678999999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+|||||+ ++|.+++.....+++..+..++.||+.||.|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 122 (333)
T cd06650 75 --------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 122 (333)
T ss_pred --------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 356899999996 59999998888899999999999999999999985
Q ss_pred -CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 582 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 582 -gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+|+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 184 (333)
T cd06650 123 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSD 184 (333)
T ss_pred CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-----------------ccccCCCCccccCHHHhcC-CCCCcHHH
Confidence 7999999999999999999999999999754211 0123479999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHh------------------------------------------hhhcCCCC
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSD------------------------------------------LKQKGELP 695 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~------------------------------------------~~~~~~~p 695 (1239)
||||||++|||++ ||............ .......+
T Consensus 185 vwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (333)
T cd06650 185 IWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPP 264 (333)
T ss_pred HHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCc
Confidence 9999999999996 66543322211000 00000001
Q ss_pred Ccc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 696 PSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 696 ~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
... ...++++++||.+||+.||++|||+.++++|+|++...
T Consensus 265 ~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 265 KLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred cCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 100 12346789999999999999999999999999997654
No 130
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.8e-36 Score=350.44 Aligned_cols=249 Identities=27% Similarity=0.443 Sum_probs=188.8
Q ss_pred eeeccCCceEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~------------ 70 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH------------ 70 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecC------------
Confidence 68999999999999976 3678999999864322 34578899999999999999999887432
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHH
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
....+|++|||++++|.+++... ..+++..++.++.||+.||.||
T Consensus 71 --------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L 124 (317)
T cd07868 71 --------------------------ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 124 (317)
T ss_pred --------------------------CCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence 23568999999999998887532 2489999999999999999999
Q ss_pred HhCCccccCCCcccEEE----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 000880 579 HGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 654 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 654 (1239)
|++||+||||||+|||+ +.++.+||+|||+|+........ .......+||+.|+|||++.+...
T Consensus 125 H~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07868 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc------------ccccCCccccccccCCHHHcCCCC
Confidence 99999999999999999 45578999999999865321100 011234679999999999987566
Q ss_pred CCcchhhHHHHHHHHHhhc---CCchhHHH---------HHHHHhhhhcC-----------CCC----------------
Q 000880 655 IDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLKQKG-----------ELP---------------- 695 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~---------~~~~~~~~~~~-----------~~p---------------- 695 (1239)
++.++||||+||++|||++ ||...... ..........+ ..+
T Consensus 193 ~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (317)
T cd07868 193 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTN 272 (317)
T ss_pred cCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCc
Confidence 8999999999999999997 66421110 00000000000 000
Q ss_pred --------CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 696 --------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 696 --------~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
.......+++.+||++||+.||.+|||++++|+||||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 273 CSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred ccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0001123467899999999999999999999999997
No 131
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-36 Score=357.99 Aligned_cols=247 Identities=26% Similarity=0.344 Sum_probs=194.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|++++.||+|+||.||+|++..+++.||+|+.... ....|+.+++.++||||++++++|..
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 128 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVS--------- 128 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEe---------
Confidence 4799999999999999999999999999999975321 23569999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....|+||||+.++|.+++.. ...+++..++.++.||+.||.|||++|
T Consensus 129 -------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 177 (357)
T PHA03209 129 -------------------------------GAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR 177 (357)
T ss_pred -------------------------------CCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346789999999999988865 456999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||
T Consensus 178 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw 240 (357)
T PHA03209 178 IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA----------------PAFLGLAGTVETNAPEVLAR-DKYNSKADIW 240 (357)
T ss_pred eecCCCCHHHEEECCCCCEEEecCccccccccC----------------cccccccccccccCCeecCC-CCCCchhhHH
Confidence 999999999999999999999999999753211 01134579999999999987 5689999999
Q ss_pred HHHHHHHHhhc----CCchhH---------HHHHHHHhhhhcCCCCCcc-------------------------------
Q 000880 663 SLGIVFFELWH----PFSTAM---------ERQIVLSDLKQKGELPPSW------------------------------- 698 (1239)
Q Consensus 663 SlGviL~ELlt----Pf~~~~---------~~~~~~~~~~~~~~~p~~~------------------------------- 698 (1239)
||||++|||++ +|.... ........+...+..|..+
T Consensus 241 SlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (357)
T PHA03209 241 SAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQR 320 (357)
T ss_pred HHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhc
Confidence 99999999985 222110 0111111111111111110
Q ss_pred ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 699 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 699 ~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
...+.++.+||.+||+.||.+|||+.++|+||||.++
T Consensus 321 ~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 321 VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred cCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 1233466789999999999999999999999999864
No 132
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.6e-36 Score=353.70 Aligned_cols=264 Identities=24% Similarity=0.403 Sum_probs=212.8
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||+|+||.||+++++.+++.||+|++..... .......+.+|+.++..++||||+++++++..
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-------- 72 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-------- 72 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc--------
Confidence 479999999999999999999999999999999874321 22234457889999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
..++|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~ 120 (331)
T cd05624 73 --------------------------------ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ 120 (331)
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 699999986 4679999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----CCCC
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 656 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~~ 656 (1239)
+||+||||||+|||++.++.+||+|||+++...... .......+||+.|+|||++.+. ..++
T Consensus 121 ~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05624 121 LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--------------TVQSSVAVGTPDYISPEILQAMEDGMGKYG 186 (331)
T ss_pred CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC--------------ceeeccccCCcccCCHHHHhccccCCCCCC
Confidence 999999999999999999999999999997643211 0111235799999999998752 3478
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhc
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 729 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~ 729 (1239)
.++|||||||+||||++ ||......+....+.... ..+|..+...++++.++|.+||+.++.+ |++++++++|
T Consensus 187 ~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 89999999999999997 887655544444433322 2344555566789999999999976654 5699999999
Q ss_pred cCCCCchHHHHH
Q 000880 730 ALPPQMEYELLD 741 (1239)
Q Consensus 730 ~~~~~~~~~~~~ 741 (1239)
+||....+....
T Consensus 267 ~~f~~~~~~~~~ 278 (331)
T cd05624 267 AFFEGIDWENIR 278 (331)
T ss_pred CCcCCCCHHHHh
Confidence 999998877554
No 133
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.1e-36 Score=380.76 Aligned_cols=262 Identities=31% Similarity=0.543 Sum_probs=212.4
Q ss_pred CCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 419 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
....+++|++++.||+|+||+||+|+++.++..||+|++............+.+|+.+|+.|+|||||+++++|...
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de--- 84 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK--- 84 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---
Confidence 34457899999999999999999999999999999999986655555667899999999999999999999988542
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----CCCCHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVE 573 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~~~~~~~i~~qI~~ 573 (1239)
....+|||||||+ ++|.++|... ..+++..++.|+.||+.
T Consensus 85 -----------------------------------~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ 129 (1021)
T PTZ00266 85 -----------------------------------ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH 129 (1021)
T ss_pred -----------------------------------CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 2356899999996 6999988652 56999999999999999
Q ss_pred HHHHHHhC-------CccccCCCcccEEEcC-----------------CCCEEEeecCcchhccccccccCCCCCCCCCC
Q 000880 574 GLAHIHGQ-------GIIHRDLTPNNIFFDA-----------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 629 (1239)
Q Consensus 574 gL~yLHs~-------gIiHrDLKp~NILl~~-----------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~ 629 (1239)
||.|||+. +||||||||+||||+. .+.+||+|||++..+....
T Consensus 130 ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------- 196 (1021)
T PTZ00266 130 ALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------- 196 (1021)
T ss_pred HHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc-------------
Confidence 99999984 4999999999999964 2359999999997642111
Q ss_pred ccccCcccccCccCCCcccccCC-CCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHH
Q 000880 630 VSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ 705 (1239)
Q Consensus 630 ~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~ 705 (1239)
.....+||+.|+|||++.+. ..++.++||||||||||||++ ||.........+..+.....+| ....++++
T Consensus 197 ---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp--i~~~S~eL 271 (1021)
T PTZ00266 197 ---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP--IKGKSKEL 271 (1021)
T ss_pred ---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC--cCCCCHHH
Confidence 11345799999999998642 358899999999999999997 8865554444444443333222 23456789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 706 ESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 706 ~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
.+||..||+.+|.+||++.++|+|+|+....
T Consensus 272 ~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 272 NILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred HHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 9999999999999999999999999876553
No 134
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.6e-36 Score=344.13 Aligned_cols=257 Identities=27% Similarity=0.403 Sum_probs=205.7
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.|++.+.||+|+||+||++.+..+++.||||++...... ......+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 71 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC---------
Confidence 478899999999999999999999999999998754322 1223457889999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|+|||||+ ++|.+++... ..+++..+..++.||+.||.|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05605 72 -------------------------------KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR 120 (285)
T ss_pred -------------------------------CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 357899999996 6898877543 459999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+||+||||||+||++++++.++|+|||++....... .....+||+.|+|||++.+ ..++.++|
T Consensus 121 ~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05605 121 ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----------------TIRGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC----------------ccccccCCCCccCcHHhcC-CCCCcccc
Confidence 999999999999999999999999999987542111 1123479999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHH---HHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhc
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQI---VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQD 729 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~---~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~ 729 (1239)
||||||++|||++ ||........ ....+.. ..+......++.+.+||.+||..||.+|| +++++++|
T Consensus 184 iws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 184 WWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred chhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999996 7765433211 1111111 11122234567899999999999999999 99999999
Q ss_pred cCCCCchHHHH
Q 000880 730 ALPPQMEYELL 740 (1239)
Q Consensus 730 ~~~~~~~~~~~ 740 (1239)
+||....+.-.
T Consensus 262 ~~~~~~~~~~~ 272 (285)
T cd05605 262 PFFRTANFKRL 272 (285)
T ss_pred cCccCCCHHHH
Confidence 99998776644
No 135
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.4e-36 Score=355.42 Aligned_cols=253 Identities=25% Similarity=0.401 Sum_probs=198.7
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.+++|+.+++||+|+||.||+|++..+|+.||||++.... .......+.+|+.+++.++||||++++++|..
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 143 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDH------- 143 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-------
Confidence 3578999999999999999999999999999999986432 33445678999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|+|||||.+ +|... ...++..+..++.||+.||+|||+
T Consensus 144 ---------------------------------~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~ 186 (353)
T PLN00034 144 ---------------------------------NGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHR 186 (353)
T ss_pred ---------------------------------CCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999974 66432 345678888999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----CCCC
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 656 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~~ 656 (1239)
+||+||||||+|||++.++.+||+|||+++.+.... ......+||+.|+|||++... ...+
T Consensus 187 ~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 251 (353)
T PLN00034 187 RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---------------DPCNSSVGTIAYMSPERINTDLNHGAYDG 251 (353)
T ss_pred CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc---------------ccccccccCccccCccccccccccCcCCC
Confidence 999999999999999999999999999998643111 011345799999999987531 2345
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHH--HHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~--~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
.++|||||||++|||++ ||..... ......... ....+......++++.+||.+||+.||++|||+.++++|+|
T Consensus 252 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 252 YAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC-MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 68999999999999996 7752211 111111111 12223333456678999999999999999999999999999
Q ss_pred CCCc
Q 000880 732 PPQM 735 (1239)
Q Consensus 732 ~~~~ 735 (1239)
+...
T Consensus 331 ~~~~ 334 (353)
T PLN00034 331 ILRA 334 (353)
T ss_pred cccC
Confidence 9875
No 136
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.6e-37 Score=356.11 Aligned_cols=252 Identities=26% Similarity=0.397 Sum_probs=202.4
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc---CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 432 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L---~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
||+|+||+||+|+++.+|+.||||++..... .......+..|..++..+ .||||++++++|..
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~------------- 67 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT------------- 67 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-------------
Confidence 7999999999999999999999999975322 112234456677777665 69999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHr 120 (330)
T cd05586 68 ---------------------------DSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120 (330)
T ss_pred ---------------------------CCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999996 5899999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv 185 (330)
T cd05586 121 DLKPENILLDATGHIALCDFGLSKANLTDN---------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGV 185 (330)
T ss_pred cCCHHHeEECCCCCEEEecCCcCcCCCCCC---------------CCccCccCCccccCHHHHcCCCCCCCccceecccc
Confidence 999999999999999999999987532110 01234579999999999976556899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC----CHHHHHhccCCCCchHHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDALPPQMEYEL 739 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP----ta~eiL~~~~~~~~~~~~ 739 (1239)
++|+|++ ||......+....+......+|.. ..++++.+||++||+.||.+|| ++.++++||||....+..
T Consensus 186 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~ 263 (330)
T cd05586 186 LVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN--VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDL 263 (330)
T ss_pred EEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCc--cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHH
Confidence 9999996 776655544443333333333322 3467899999999999999998 799999999999877654
Q ss_pred H
Q 000880 740 L 740 (1239)
Q Consensus 740 ~ 740 (1239)
.
T Consensus 264 ~ 264 (330)
T cd05586 264 L 264 (330)
T ss_pred H
Confidence 4
No 137
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.3e-36 Score=351.71 Aligned_cols=253 Identities=22% Similarity=0.368 Sum_probs=203.8
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++.++ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT------------- 67 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-------------
Confidence 369999999999999999999999999975432 223445688999999888 69999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHr 120 (327)
T cd05617 68 ---------------------------TSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120 (327)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 357899999996 5899988888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (327)
T cd05617 121 DLKLDNVLLDADGHIKLTDYGMCKEGLGPG---------------DTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGV 184 (327)
T ss_pred CCCHHHEEEeCCCCEEEeccccceeccCCC---------------CceecccCCcccCCHHHHCC-CCCCchheeehhHH
Confidence 999999999999999999999987421110 01134579999999999987 57899999999999
Q ss_pred HHHHhhc---CCchh------HHHHHHHHhhhhc-CCCCCccccCCHHHHHHHHHccCCCCCCCCC------HHHHHhcc
Q 000880 667 VFFELWH---PFSTA------MERQIVLSDLKQK-GELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQDA 730 (1239)
Q Consensus 667 iL~ELlt---Pf~~~------~~~~~~~~~~~~~-~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------a~eiL~~~ 730 (1239)
++|||++ ||... ............. ..+| ...++.+.++|++||+.||.+|++ +.++++|+
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 185 LMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP---RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred HHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 9999997 77421 1122222222222 2223 234578999999999999999997 57999999
Q ss_pred CCCCchHHHHH
Q 000880 731 LPPQMEYELLD 741 (1239)
Q Consensus 731 ~~~~~~~~~~~ 741 (1239)
||....++.+.
T Consensus 262 ~f~~~~~~~~~ 272 (327)
T cd05617 262 FFRSIDWDLLE 272 (327)
T ss_pred CCCCCCHHHHH
Confidence 99999877553
No 138
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=339.20 Aligned_cols=264 Identities=25% Similarity=0.394 Sum_probs=223.9
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCc
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~ 497 (1239)
.....||..+.+||+|+||+|.+|..+.+.+.||||++++.-. .....+--+.|-++|+.. +-|.+++++.||
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF----- 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF----- 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh-----
Confidence 4456899999999999999999999999999999999875421 122233445677777776 567888888776
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
+....+|+||||+. |+|...+++.+++.++.|..|+.+|+-||-
T Consensus 420 -----------------------------------QTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLF 464 (683)
T KOG0696|consen 420 -----------------------------------QTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLF 464 (683)
T ss_pred -----------------------------------hhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhh
Confidence 23578999999995 699999999999999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||++|||+||||..|||++.+|++||+|||+++..-.. ..++.++||||.|+|||++.. ..|+
T Consensus 465 FLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~---------------~~TTkTFCGTPdYiAPEIi~Y-qPYg 528 (683)
T KOG0696|consen 465 FLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD---------------GVTTKTFCGTPDYIAPEIIAY-QPYG 528 (683)
T ss_pred hhhcCCeeeeeccccceEeccCCceEeeecccccccccC---------------CcceeeecCCCcccccceEEe-cccc
Confidence 999999999999999999999999999999999842111 123467899999999999886 6799
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHh
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQ 728 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~ 728 (1239)
.++|||||||+||||+. ||.+..+.+....+...+..+|.+++ .++.++.+.+|.+.|.+|.. -.+|-.
T Consensus 529 ksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslS---kEAv~ickg~ltK~P~kRLGcg~~ge~di~~ 605 (683)
T KOG0696|consen 529 KSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLS---KEAVAICKGLLTKHPGKRLGCGPEGERDIRE 605 (683)
T ss_pred cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccccc---HHHHHHHHHHhhcCCccccCCCCccccchhh
Confidence 99999999999999995 99999999988888887877887654 49999999999999999974 467899
Q ss_pred ccCCCCchHHHHHH
Q 000880 729 DALPPQMEYELLDN 742 (1239)
Q Consensus 729 ~~~~~~~~~~~~~~ 742 (1239)
||||....|+-++.
T Consensus 606 H~FFR~iDWek~E~ 619 (683)
T KOG0696|consen 606 HPFFRRIDWEKLER 619 (683)
T ss_pred CcchhhccHHHHhh
Confidence 99999999886544
No 139
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.3e-36 Score=353.57 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=202.9
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||+||+|+++.+|+.||||++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~------------- 67 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-------------
Confidence 369999999999999999999999999975422 2223345566655 4677899999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~ 120 (325)
T cd05604 68 ---------------------------TEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYR 120 (325)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 357899999996 5899998888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (325)
T cd05604 121 DLKPENILLDSQGHVVLTDFGLCKEGIAQS---------------DTTTTFCGTPEYLAPEVIRK-QPYDNTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEeecCCcccCCCCC---------------CCcccccCChhhCCHHHHcC-CCCCCcCccccccc
Confidence 999999999999999999999987421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchHHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYEL 739 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~~~ 739 (1239)
++|||++ ||......+............++ ..+..+.++|++||..||.+||++ .++++|+||....+..
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~ 261 (325)
T cd05604 185 VLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRP---GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTD 261 (325)
T ss_pred eehhhhcCCCCCCCCCHHHHHHHHHcCCccCCC---CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHH
Confidence 9999996 77765555444444332222222 456789999999999999999976 6999999999887654
Q ss_pred H
Q 000880 740 L 740 (1239)
Q Consensus 740 ~ 740 (1239)
.
T Consensus 262 ~ 262 (325)
T cd05604 262 L 262 (325)
T ss_pred H
Confidence 3
No 140
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=357.29 Aligned_cols=248 Identities=29% Similarity=0.446 Sum_probs=209.3
Q ss_pred eeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCc
Q 000880 431 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 510 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~ 510 (1239)
+||+|.||+||.|++..|...+|||-|..+ ..+..+-+..|+.+.+.|+|.|||+|+|+|-+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se---------------- 643 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVSE---------------- 643 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccCC----------------
Confidence 699999999999999999999999988643 33456678899999999999999999998732
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCC--CHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 511 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHF--DKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 511 ~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l--~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
..++-|.||-++ |+|..+|+. -+++ .+...-+|.+||++||.|||++.||||
T Consensus 644 ------------------------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHR 699 (1226)
T KOG4279|consen 644 ------------------------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHR 699 (1226)
T ss_pred ------------------------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeec
Confidence 347789999996 599999975 4666 788889999999999999999999999
Q ss_pred CCCcccEEEcC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc-CCCCCCcchhhHHH
Q 000880 587 DLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ-GWPKIDEKADMYSL 664 (1239)
Q Consensus 587 DLKp~NILl~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~~~~ksDIwSl 664 (1239)
|||-.||||+. .|.+||+|||.++++. +....+.++.||..|||||++. |...|+.++|||||
T Consensus 700 DIKGDNVLvNTySGvlKISDFGTsKRLA---------------ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~ 764 (1226)
T KOG4279|consen 700 DIKGDNVLVNTYSGVLKISDFGTSKRLA---------------GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSF 764 (1226)
T ss_pred cccCCcEEEeeccceEEecccccchhhc---------------cCCccccccccchhhhChHhhccCCcCCCchhhhhhc
Confidence 99999999975 6899999999999763 2223346689999999999885 44569999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 665 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
||++.||.| ||......+..+-.+..-...|+.+...+.+++.+|.+|+.+||.+||+|.++|++||.+-.
T Consensus 765 GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 765 GCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred cceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 999999998 78766555555444433444667767777899999999999999999999999999987655
No 141
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-35 Score=333.37 Aligned_cols=255 Identities=28% Similarity=0.472 Sum_probs=207.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
++|++.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD------ 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc------
Confidence 4688899999999999999999999999999998754322 2234568899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...+|++|||++ ++|.+++.....+++..++.++.|++.||.|||
T Consensus 76 ----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 121 (263)
T cd06625 76 ----------------------------------DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH 121 (263)
T ss_pred ----------------------------------CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347899999996 589999988888999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+.|++||||||+||+++.++.++|+|||+++........ ........|++.|+|||++.+ ..++.++
T Consensus 122 ~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (263)
T cd06625 122 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS------------GTGMKSVTGTPYWMSPEVISG-EGYGRKA 188 (263)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc------------cccccCCCcCccccCcceecc-CCCCchh
Confidence 999999999999999999999999999998754321100 000123468899999999988 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|||||||++|||++ ||.............. ....+......++.+.++|++||..+|.+|||+.++++|+||
T Consensus 189 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 189 DVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred hhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 99999999999997 7765544443333322 222233334556789999999999999999999999999996
No 142
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=344.54 Aligned_cols=259 Identities=28% Similarity=0.437 Sum_probs=214.8
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCch-hHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.+.|+..++||+||||.||-|+.+.||+.||+|++.++....+ -....++|-.+|.+++.|.||.+-.+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf--------- 254 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF--------- 254 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee---------
Confidence 4678889999999999999999999999999998865443222 234578899999999999999988776
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yL 578 (1239)
.....+++||..|+ |+|.-+|-+.+ .|+++.+++|+.+|+.||++|
T Consensus 255 -------------------------------eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehl 303 (591)
T KOG0986|consen 255 -------------------------------ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHL 303 (591)
T ss_pred -------------------------------cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHH
Confidence 23577999999996 68988886655 699999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|..+||+|||||+|||+|+.|||+|+|.|+|..+.... ..++.+||.+|||||++++ ..|+..
T Consensus 304 H~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~----------------~~~~rvGT~GYMAPEvl~n-e~Y~~s 366 (591)
T KOG0986|consen 304 HRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK----------------PIRGRVGTVGYMAPEVLQN-EVYDFS 366 (591)
T ss_pred HhcceeeccCChhheeeccCCCeEeeccceEEecCCCC----------------ccccccCcccccCHHHHcC-CcccCC
Confidence 99999999999999999999999999999999764332 1355699999999999998 569999
Q ss_pred hhhHHHHHHHHHhhc---CCchhHHH----HHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHH
Q 000880 659 ADMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATEL 726 (1239)
Q Consensus 659 sDIwSlGviL~ELlt---Pf~~~~~~----~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~ei 726 (1239)
+|+|||||+||||+. ||....+. ++-...+.....++. ..++++++|.+.+|++||.+|. ++.++
T Consensus 367 ~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~---kFS~eakslc~~LL~Kdp~~RLGcrg~ga~ev 443 (591)
T KOG0986|consen 367 PDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSD---KFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEV 443 (591)
T ss_pred ccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhccc---ccCHHHHHHHHHHHccCHHHhccCCCcCcchh
Confidence 999999999999994 88755432 333333333333443 4457999999999999999997 57899
Q ss_pred HhccCCCCchHHHHH
Q 000880 727 LQDALPPQMEYELLD 741 (1239)
Q Consensus 727 L~~~~~~~~~~~~~~ 741 (1239)
.+||||+.+.|.-+.
T Consensus 444 k~HpfFk~lnw~rle 458 (591)
T KOG0986|consen 444 KEHPFFKDLNWRRLE 458 (591)
T ss_pred hhCcccccCCHhHHh
Confidence 999999999876543
No 143
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.1e-36 Score=351.04 Aligned_cols=250 Identities=27% Similarity=0.388 Sum_probs=200.3
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||.||+|+++.+|+.||+|++..... .......+.+|.. +++.++||||+++++++..
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~------------- 67 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT------------- 67 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975322 1222344555654 6788999999999987632
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|...+.....+++..++.++.||+.||.|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~ 120 (321)
T cd05603 68 ---------------------------AEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120 (321)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 357899999996 5898888887889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (321)
T cd05603 121 DLKPENILLDSQGHVVLTDFGLCKEGVEPE---------------ETTSTFCGTPEYLAPEVLRK-EPYDRTVDWWCLGA 184 (321)
T ss_pred cCCHHHeEECCCCCEEEccCCCCccCCCCC---------------CccccccCCcccCCHHHhcC-CCCCCcCcccccch
Confidence 999999999999999999999987421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYE 738 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~~ 738 (1239)
++|||++ ||..................+| ...+..+.++|.+||+.||.+||++ .++++|+|+....+.
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~ 260 (321)
T cd05603 185 VLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP---GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWD 260 (321)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHH
Confidence 9999997 7766554444433333222233 2455689999999999999999875 599999999887655
No 144
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.1e-36 Score=351.65 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=201.0
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||+||+|+++.+++.||+|++..... .......+.+|.. +++.++||||+++++++..
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~------------- 67 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT------------- 67 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-------------
Confidence 369999999999999999999999999975322 1122234455544 5678899999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHr 120 (325)
T cd05602 68 ---------------------------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120 (325)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 356899999996 5899999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05602 121 DLKPENILLDSQGHIVLTDFGLCKENIEHN---------------GTTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEccCCCCcccccCC---------------CCcccccCCccccCHHHHcC-CCCCCccccccccH
Confidence 999999999999999999999987532110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH----HHHhccCCCCchHHH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT----ELLQDALPPQMEYEL 739 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~----eiL~~~~~~~~~~~~ 739 (1239)
++|||++ ||......+............+ ...++.+.++|.+||+.||.+||++. ++++|+|+....+.-
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~ 261 (325)
T cd05602 185 VLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK---PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDD 261 (325)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC---CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHH
Confidence 9999997 7776555444443333222222 34567899999999999999999865 899999998877653
No 145
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.3e-36 Score=339.86 Aligned_cols=252 Identities=35% Similarity=0.561 Sum_probs=203.4
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCc
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
|++++.||+|+||+||+|++..+++.||+|++..............+|+.+++.++||||+++++.+..
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------- 69 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD----------- 69 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----------
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----------
Confidence 788999999999999999999999999999998765444444455679999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
...++++||||++ +|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~ 120 (260)
T PF00069_consen 70 -----------------------------DNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIV 120 (260)
T ss_dssp -----------------------------SSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred -----------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4678899999987 9999999888899999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
||||||+|||++.++.++|+|||.+...... ........+|+.|+|||++.....++.++|||||
T Consensus 121 H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 185 (260)
T PF00069_consen 121 HRDIKPENILLDENGEVKLIDFGSSVKLSEN---------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSL 185 (260)
T ss_dssp ESSBSGGGEEESTTSEEEESSGTTTEESTST---------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccc---------------cccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999998753110 0112445789999999999833678999999999
Q ss_pred HHHHHHhhc---CCchh---HHHHHHHHhhhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 665 GIVFFELWH---PFSTA---MERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~---~~~~~~~~~~~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|+++|+|++ ||... ................ ........+++.++|.+||+.||++|||+.++++||||
T Consensus 186 G~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 186 GIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999999997 77655 2222222221111000 01111112689999999999999999999999999996
No 146
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2e-35 Score=330.25 Aligned_cols=251 Identities=28% Similarity=0.519 Sum_probs=206.0
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||+|+||.||++.++.+++.||+|.+............+.+|+.+++.++||||+++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG---------- 70 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----------
Confidence 4889999999999999999999999999999997655554556678899999999999999999876521
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....+|++||||+ ++|.+++... ..+++.+++.++.|++.||+|||++
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~ 121 (257)
T cd08223 71 -----------------------------EDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121 (257)
T ss_pred -----------------------------CCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1346899999997 5899888753 4589999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.++|+
T Consensus 122 ~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 185 (257)
T cd08223 122 HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------DMASTLIGTPYYMSPELFSN-KPYNYKSDV 185 (257)
T ss_pred CeeccCCCchhEEEecCCcEEEecccceEEecccC---------------CccccccCCcCccChhHhcC-CCCCchhhh
Confidence 99999999999999999999999999997653211 01133568999999999887 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|||||++|+|++ ||............. .+..++.....++++.++|.+||+.||.+|||+.++++|||+
T Consensus 186 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 186 WALGCCVYEMATLKHAFNAKDMNSLVYRII--EGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--hcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 999999999997 665444333332222 223333334566789999999999999999999999999996
No 147
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.9e-35 Score=339.93 Aligned_cols=271 Identities=23% Similarity=0.381 Sum_probs=207.3
Q ss_pred CCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 419 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
-...+++|++.+.||+|+||.||+|.++.+++.||||++............+.+|+.+++.++||||+++++.+......
T Consensus 7 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (310)
T cd07865 7 FCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP 86 (310)
T ss_pred ccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc
Confidence 34456889999999999999999999999999999999875543333344567899999999999999999987543110
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~y 577 (1239)
........|+||||++++|.+.+.... .+++..++.++.||+.||+|
T Consensus 87 --------------------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~ 134 (310)
T cd07865 87 --------------------------------YNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYY 134 (310)
T ss_pred --------------------------------ccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 012245789999999999988887553 68999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++|++|+||||+||+++.++.+||+|||++.......... ........++..|+|||++.+...++.
T Consensus 135 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 203 (310)
T cd07865 135 IHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK-----------PNRYTNRVVTLWYRPPELLLGERDYGP 203 (310)
T ss_pred HHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccC-----------CCCccCcccCccccCcHHhcCCcccCc
Confidence 999999999999999999999999999999998653221110 011234568899999999877555789
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCc-----------------------------cccCCHHH
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS-----------------------------WVAKFSEQ 705 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~-----------------------------~~~~~~e~ 705 (1239)
++||||||+++|||++ ||................+..++. .....+.+
T Consensus 204 ~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 283 (310)
T cd07865 204 PIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHA 283 (310)
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHH
Confidence 9999999999999996 555443322211111111111110 00123567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 706 ESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 706 ~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
.+||.+||..||.+|||++++++|+||
T Consensus 284 ~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 284 LDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 899999999999999999999999997
No 148
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.9e-35 Score=329.99 Aligned_cols=250 Identities=31% Similarity=0.581 Sum_probs=208.7
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||+|+||.||+|.++.+|+.||+|.+............+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD---------- 70 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc----------
Confidence 5888999999999999999999999999999998665555566789999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 120 (256)
T cd08529 71 ------------------------------KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120 (256)
T ss_pred ------------------------------CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 357899999996 5999998764 5689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+||+++.++.++|+|||+++....... ......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~---------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd08529 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN---------------FANTIVGTPYYLSPELCED-KPYNEKSDV 184 (256)
T ss_pred CcccCCCCcceEEEeCCCCEEEcccccceeccCccc---------------hhhccccCccccCHHHhcC-CCCCCccch
Confidence 999999999999999999999999999886532110 1133468899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|||||++|+|++ ||.............. ...++.....++++.++|.+||+.+|++||++.++++|+|.
T Consensus 185 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 185 WALGVVLYECCTGKHPFDANNQGALILKIIR--GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 999999999996 7766554444433332 33333333566789999999999999999999999999974
No 149
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=9.7e-36 Score=363.86 Aligned_cols=254 Identities=26% Similarity=0.373 Sum_probs=207.1
Q ss_pred CCceEEeeeccCCceEEEEEEEccC-CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..|.+.+.||+|+||.||+|....+ +..||+|.+... .......+.+|+.+|+.++|||||+++++|..
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-------- 136 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKS-------- 136 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--------
Confidence 4599999999999999999999877 788999977533 23344567889999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
...+|||||||+ |+|.+++.. ...+++..+..++.||+.||.|
T Consensus 137 --------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 184 (478)
T PTZ00267 137 --------------------------------DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDE 184 (478)
T ss_pred --------------------------------CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 357899999996 699887753 3468999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++||+||||||+|||++.++.+||+|||+++....... .......+||+.|+|||++.+ ..++.
T Consensus 185 lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 250 (478)
T PTZ00267 185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-------------LDVASSFCGTPYYLAPELWER-KRYSK 250 (478)
T ss_pred HHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc-------------cccccccCCCccccCHhHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 001234679999999999987 57899
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
++|||||||++|||++ ||......+....... +..++.....++++.++|.+||..||++||++.+++.|+|+..
T Consensus 251 ~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 251 KADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY--GKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999997 8876555554444333 2233333456678999999999999999999999999988765
Q ss_pred c
Q 000880 735 M 735 (1239)
Q Consensus 735 ~ 735 (1239)
.
T Consensus 329 ~ 329 (478)
T PTZ00267 329 V 329 (478)
T ss_pred H
Confidence 4
No 150
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.4e-35 Score=341.92 Aligned_cols=263 Identities=27% Similarity=0.423 Sum_probs=208.8
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
+..++|++.+.||.|+||.||+|.++.+|+.||+|+++...........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 78 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK----- 78 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC-----
Confidence 346899999999999999999999999999999999976544333334567899999999999999999887432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....+|+||||++++|.+++... ..+++..++.++.||+.||+|||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH 125 (309)
T cd07845 79 ---------------------------------HLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH 125 (309)
T ss_pred ---------------------------------CCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 12467999999999998888753 56999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++||||||+||+++.++.+||+|||++....... ...+...+++.|+|||++.+...++.++
T Consensus 126 ~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 190 (309)
T cd07845 126 ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA---------------KPMTPKVVTLWYRAPELLLGCTTYTTAI 190 (309)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc---------------CCCCcccccccccChhhhcCCCCcCchH
Confidence 9999999999999999999999999999998653211 0112335688999999987656689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcC-------------------CCCC--------ccccCCHHHHHHH
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP--------SWVAKFSEQESLL 709 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~-------------------~~p~--------~~~~~~~e~~~LI 709 (1239)
|||||||++|||++ ||................+ ..+. .+...++++.++|
T Consensus 191 DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 270 (309)
T cd07845 191 DMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLL 270 (309)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHH
Confidence 99999999999997 6655444433322221100 0000 0112356789999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 710 RRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 710 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
.+||+.||.+|||+.++++|+||....
T Consensus 271 ~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 271 NFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred HHHhcCChhhCcCHHHHhcChhhccCC
Confidence 999999999999999999999997654
No 151
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.3e-35 Score=337.38 Aligned_cols=253 Identities=28% Similarity=0.478 Sum_probs=201.6
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|+.++.||.|+||.||+|+++.+|+.||||+++...........+.+|+.++++++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---------- 70 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT---------- 70 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc----------
Confidence 4889999999999999999999999999999987654444444678899999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|++|||++++|..++.. ...+++..++.++.||+.||+|||+++
T Consensus 71 ------------------------------~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 71 ------------------------------ENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred ------------------------------CCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356799999998899888865 346899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++||||+|+||+++.++.+||+|||++....... .......+++.|+|||++.+...++.++|||
T Consensus 121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (284)
T cd07860 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 185 (284)
T ss_pred eecCCCCHHHEEECCCCCEEEeeccchhhcccCc---------------cccccccccccccCCeEEecCCCCCcHHHHH
Confidence 9999999999999999999999999987543211 0112345789999999987755578899999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC------------------CC--------CccccCCHHHHHHHHHcc
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------LP--------PSWVAKFSEQESLLRRLM 713 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~------------------~p--------~~~~~~~~e~~~LI~~~L 713 (1239)
||||++|||+| ||....+...........+. ++ ......++++.++|.+||
T Consensus 186 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07860 186 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQML 265 (284)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhc
Confidence 99999999997 66544332222221111000 00 011234567889999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 000880 714 SPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~~~~ 732 (1239)
+.||.+|||+.++++||||
T Consensus 266 ~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 266 HYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCCcccCCCHHHHhcCCCC
Confidence 9999999999999999997
No 152
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.6e-35 Score=336.35 Aligned_cols=254 Identities=27% Similarity=0.441 Sum_probs=201.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||+|+||.||+|+++.+|+.||+|++............+.+|+.+++.++||||++++++|..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--------- 71 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee---------
Confidence 46899999999999999999999999999999987544333344568899999999999999999988733
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...++++|||+++ .|..++.....+++..++.++.||+.||+|||++|
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~ 120 (286)
T cd07847 72 -------------------------------KRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120 (286)
T ss_pred -------------------------------CCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3568999999986 55556556667999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++||||||+||+++.++.+||+|||++........ ......++..|+|||++.+...++.++|||
T Consensus 121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 185 (286)
T cd07847 121 CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD---------------DYTDYVATRWYRAPELLVGDTQYGPPVDVW 185 (286)
T ss_pred ceecCCChhhEEEcCCCcEEECccccceecCCCcc---------------cccCcccccccCCHHHHhCCCCcCchhhhH
Confidence 99999999999999999999999999986532110 112346788999999987655688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcC-------------------CCCC---------ccccCCHHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP---------SWVAKFSEQESLLRR 711 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~-------------------~~p~---------~~~~~~~e~~~LI~~ 711 (1239)
||||++|+|++ ||......+.......... ..|. .+...+..+.+||.+
T Consensus 186 slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07847 186 AIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKG 265 (286)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHH
Confidence 99999999997 6654443332221111000 0111 122345678999999
Q ss_pred ccCCCCCCCCCHHHHHhccCC
Q 000880 712 LMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~ 732 (1239)
||+.||++|||+.+++.|+||
T Consensus 266 ~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 266 CLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HhcCCccccCCHHHHhcCCCC
Confidence 999999999999999999997
No 153
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-35 Score=354.16 Aligned_cols=257 Identities=25% Similarity=0.337 Sum_probs=202.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
..+|++++.||+|+||.||+|... .++..||+|.+... ....+|+.+|+.++|||||+++++|..
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~------ 157 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRW------ 157 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEee------
Confidence 457999999999999999999864 34678999987532 235689999999999999999987732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|++||++.++|.+++.....+++..++.++.||+.||.|||+
T Consensus 158 ----------------------------------~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~ 203 (392)
T PHA03207 158 ----------------------------------KSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHG 203 (392)
T ss_pred ----------------------------------CCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999777889999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..|+.++|
T Consensus 204 ~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 269 (392)
T PHA03207 204 RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-------------TPQCYGWSGTLETNSPELLAL-DPYCAKTD 269 (392)
T ss_pred CCccccCCCHHHEEEcCCCCEEEccCccccccCcccc-------------cccccccccccCccCHhHhcC-CCCCchhh
Confidence 9999999999999999999999999999976432110 111234579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHH---HHHHHHhhhhc------------------------CC-----CCCcc--ccCCH
Q 000880 661 MYSLGIVFFELWH---PFSTAME---RQIVLSDLKQK------------------------GE-----LPPSW--VAKFS 703 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~---~~~~~~~~~~~------------------------~~-----~p~~~--~~~~~ 703 (1239)
||||||++|||++ ||..... ......++... .. .|..+ .....
T Consensus 270 vwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (392)
T PHA03207 270 IWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHM 349 (392)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcch
Confidence 9999999999986 6653221 11111110000 00 01000 12245
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHHH
Q 000880 704 EQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 740 (1239)
Q Consensus 704 e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~~ 740 (1239)
+++++|++||..||.+|||+.++|.||||...+.+.+
T Consensus 350 ~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~ 386 (392)
T PHA03207 350 DVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLL 386 (392)
T ss_pred hHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhh
Confidence 7889999999999999999999999999988776654
No 154
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.2e-35 Score=337.28 Aligned_cols=249 Identities=25% Similarity=0.368 Sum_probs=196.2
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCc
Q 000880 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 510 (1239)
Q Consensus 432 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~ 510 (1239)
||+|+||.||+++++.+|+.||+|++...... ......+..|+.+++.++||||+++++++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~----------------- 63 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE----------------- 63 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-----------------
Confidence 79999999999999999999999998643322 112344667999999999999999988762
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 511 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 511 ~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
....+|+||||++ ++|.+++.... .+++..++.++.||+.||+|||++||+|||
T Consensus 64 -----------------------~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 120 (277)
T cd05607 64 -----------------------SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120 (277)
T ss_pred -----------------------cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence 2357899999996 58988875433 588999999999999999999999999999
Q ss_pred CCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHH
Q 000880 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 667 (1239)
Q Consensus 588 LKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 667 (1239)
|||+|||++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~ 183 (277)
T cd05607 121 MKPENVLLDDQGNCRLSDLGLAVELKDGK----------------TITQRAGTNGYMAPEILKE-EPYSYPVDWFAMGCS 183 (277)
T ss_pred CChHhEEEcCCCCEEEeeceeeeecCCCc----------------eeeccCCCCCccCHHHHcc-CCCCCchhHHHHHHH
Confidence 99999999999999999999987643111 0123468999999999987 459999999999999
Q ss_pred HHHhhc---CCchhHH---HHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchH
Q 000880 668 FFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEY 737 (1239)
Q Consensus 668 L~ELlt---Pf~~~~~---~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~ 737 (1239)
+|||++ ||..... ......... ....+......++++.+||++||+.||.+||++ .+++.|+||+...+
T Consensus 184 l~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~ 262 (277)
T cd05607 184 IYEMVAGRTPFKDHKEKVAKEELKRRTL-EDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF 262 (277)
T ss_pred HHHHHhCCCCCCCCcchhhHHHHHHHhh-ccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence 999997 7754322 111111111 112222233567789999999999999999999 67889999988765
Q ss_pred H
Q 000880 738 E 738 (1239)
Q Consensus 738 ~ 738 (1239)
.
T Consensus 263 ~ 263 (277)
T cd05607 263 P 263 (277)
T ss_pred H
Confidence 4
No 155
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-36 Score=351.50 Aligned_cols=257 Identities=27% Similarity=0.450 Sum_probs=222.9
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
++-...|.+...||+|.|++|.+|++..+|..||||.|............+.+|+++|+.|+|||||+++.+..
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~------ 125 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE------ 125 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee------
Confidence 44467899999999999999999999999999999999877666566667999999999999999999998762
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
....+|+||||+ +|.+.+++...+++.+..+..++.|+++|++||
T Consensus 126 ----------------------------------t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYc 171 (596)
T KOG0586|consen 126 ----------------------------------TEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYC 171 (596)
T ss_pred ----------------------------------ecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHH
Confidence 256899999999 579999999999999999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|+++|||||||++||||+.+.++||+|||++.++..... ..+.||+|.|+|||++++..+.++.
T Consensus 172 H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~----------------lqt~cgsppyAaPEl~~g~~y~gpe 235 (596)
T KOG0586|consen 172 HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLM----------------LQTFCGSPPYAAPELFNGKKYDGPE 235 (596)
T ss_pred hhcceeccccchhhcccccccceeeeccccceeeccccc----------------ccccCCCCCccChHhhcCcccCCcc
Confidence 999999999999999999999999999999998753321 2457999999999999998777899
Q ss_pred hhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 659 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 659 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
+|+||+|++||-|++ ||.+..-.+.....+..+..+|... +.++.+||+++|-.+|.+|++.+++..|.|..-.
T Consensus 236 ~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~m---s~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 236 VDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYM---SCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred eehhhhhhhheeeeecccccCCcccccccchheeeeeccccee---echhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 999999999999986 9986655444444555555555443 3489999999999999999999999999986543
No 156
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2e-35 Score=341.48 Aligned_cols=249 Identities=27% Similarity=0.431 Sum_probs=188.1
Q ss_pred eeeccCCceEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
.+||+|+||+||+|+++. ++..||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~------------ 70 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSH------------ 70 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEecc------------
Confidence 689999999999999764 568899998864322 34578999999999999999999887432
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHH
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
....+|++|||++++|.+++... ..+++..++.++.||+.||.||
T Consensus 71 --------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l 124 (317)
T cd07867 71 --------------------------SDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124 (317)
T ss_pred --------------------------CCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 23568999999999988887521 2488999999999999999999
Q ss_pred HhCCccccCCCcccEEE----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 000880 579 HGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 654 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 654 (1239)
|++||+||||||+|||+ +.++.+||+|||+++........ .......+||+.|+|||++.+...
T Consensus 125 H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07867 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc------------ccccCcceecccccCcHHhcCCCc
Confidence 99999999999999999 45678999999999865322100 011234578999999999987556
Q ss_pred CCcchhhHHHHHHHHHhhc---CCchhHHH---------HHHHHhhh--------------hcCCCC-------------
Q 000880 655 IDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLK--------------QKGELP------------- 695 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~---------~~~~~~~~--------------~~~~~p------------- 695 (1239)
++.++|||||||++|||++ ||....+. ........ .....+
T Consensus 193 ~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYAN 272 (317)
T ss_pred cCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCC
Confidence 8999999999999999997 55422110 00000000 000000
Q ss_pred --------CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 696 --------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 696 --------~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
.........+.+||.+||..||.+|||+.++|+||||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 273 SSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred chhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0001123457789999999999999999999999997
No 157
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=337.83 Aligned_cols=243 Identities=17% Similarity=0.241 Sum_probs=198.1
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
..||+|++|.||+|.+ +|+.||||+++...... ...+.+.+|+.+|++++|||||++++++.+..
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~------------ 91 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV------------ 91 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc------------
Confidence 5799999999999988 59999999987543322 23467889999999999999999999885410
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccc
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 586 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs-~gIiHr 586 (1239)
....+++++||||+ |+|.+++.....+++...+.++.|++.||.|||+ .+++||
T Consensus 92 ------------------------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hr 147 (283)
T PHA02988 92 ------------------------DDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYK 147 (283)
T ss_pred ------------------------cCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 12356899999996 5899999988889999999999999999999998 499999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCcchhhHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLG 665 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlG 665 (1239)
||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+. ..++.++||||||
T Consensus 148 dlkp~nill~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 148 NLTSVSFLVTENYKLKIICHGLEKILSSP------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred cCChhhEEECCCCcEEEcccchHhhhccc------------------cccccCcccccCHHHhhhccccccchhhhhHHH
Confidence 99999999999999999999999864311 1234789999999998752 4689999999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 666 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 666 viL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|++|||++ ||......+......... ..++.....++++.+||.+||+.||.+|||+.++++.
T Consensus 210 vil~el~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 210 VVLWEIFTGKIPFENLTTKEIYDLIINKN-NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHhcC-CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 99999997 887766555444433322 2222233567899999999999999999999999864
No 158
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-35 Score=357.98 Aligned_cols=249 Identities=27% Similarity=0.337 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+.+|++++|||||++++++..
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-------- 231 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVV-------- 231 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEE--------
Confidence 457999999999999999999999999999999642 1235689999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....|++|+++.++|..++... ..+++..++.++.||+.||.|||++
T Consensus 232 --------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~ 279 (461)
T PHA03211 232 --------------------------------GGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE 279 (461)
T ss_pred --------------------------------CCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467899999999999888654 4699999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+||||+.++.+||+|||+++....... .......+||+.|+|||++.+ ..++.++||
T Consensus 280 gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-------------~~~~~~~~GT~~Y~APE~~~~-~~~~~~sDv 345 (461)
T PHA03211 280 GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS-------------TPFHYGIAGTVDTNAPEVLAG-DPYTPSVDI 345 (461)
T ss_pred CEEECcCCHHHEEECCCCCEEEcccCCceecccccc-------------cccccccCCCcCCcCHHHHcC-CCCCchHHH
Confidence 999999999999999999999999999986432110 001234579999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCchh--------HHHHHHHHhhhhcC----CCC-------------------------Cccc--
Q 000880 662 YSLGIVFFELWH---PFSTA--------MERQIVLSDLKQKG----ELP-------------------------PSWV-- 699 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~--------~~~~~~~~~~~~~~----~~p-------------------------~~~~-- 699 (1239)
|||||+||||++ |+... ...+ ...++.... .++ +.|.
T Consensus 346 wSlGviL~El~~g~~~lf~~~~~~~~~~~~~~-l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (461)
T PHA03211 346 WSAGLVIFEAAVHTASLFSASRGDERRPYDAQ-ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRY 424 (461)
T ss_pred HHHHHHHHHHHHcCCCcccCCcccccCCcHHH-HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhh
Confidence 999999999974 22111 1111 111111100 011 1111
Q ss_pred -cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 700 -AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 700 -~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
...+++.+||.+||+.||.+|||+.|+|+|+||++
T Consensus 425 ~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 425 YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 23347889999999999999999999999999975
No 159
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.3e-35 Score=335.63 Aligned_cols=255 Identities=29% Similarity=0.451 Sum_probs=212.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||+|+||.||++.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-------- 72 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--------
Confidence 478999999999999999999999999999999874332 22345678899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|++|||+ +++|.+++.....+++..++.++.||+.||.|||++
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~ 120 (290)
T cd05580 73 --------------------------------DSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL 120 (290)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 45789999999 579999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||+|+|||++.++.+||+|||++...... ....+|++.|+|||.+.+ ..++.++||
T Consensus 121 ~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di 181 (290)
T cd05580 121 DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------------------TYTLCGTPEYLAPEIILS-KGYGKAVDW 181 (290)
T ss_pred CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------------------CCCCCCCccccChhhhcC-CCCCccccH
Confidence 9999999999999999999999999998764211 123468999999999887 467899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 733 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~ 733 (1239)
||||+++|+|++ ||..................+|. ..++.++++|.+||..||.+|+ +++++++||||.
T Consensus 182 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 258 (290)
T cd05580 182 WALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS---FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFA 258 (290)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc---cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccc
Confidence 999999999997 77655543333333332333333 3357899999999999999999 999999999999
Q ss_pred CchHHHH
Q 000880 734 QMEYELL 740 (1239)
Q Consensus 734 ~~~~~~~ 740 (1239)
...+...
T Consensus 259 ~~~~~~~ 265 (290)
T cd05580 259 GIDWIAL 265 (290)
T ss_pred cCCHHHH
Confidence 8876543
No 160
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.2e-35 Score=336.02 Aligned_cols=275 Identities=23% Similarity=0.355 Sum_probs=213.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||+|+||.||++.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE--------- 71 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe---------
Confidence 478999999999999999999999999999999875432 2233457889999999999999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...++|+||||++ ++|.+++.....+++..+..++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 120 (305)
T cd05609 72 -------------------------------TKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY 120 (305)
T ss_pred -------------------------------cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+||+++.++.+||+|||+++............................|++.|+|||.+.+ ..++.++|+
T Consensus 121 ~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 199 (305)
T cd05609 121 GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDW 199 (305)
T ss_pred CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC-CCCCchhhH
Confidence 9999999999999999999999999998742111100000000000000111123468899999999877 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC---HHHHHhccCCCCc
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQDALPPQM 735 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt---a~eiL~~~~~~~~ 735 (1239)
|||||++|||++ ||......+............|......++++.++|.+||+.||.+||+ +.++++||||...
T Consensus 200 ~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 200 WAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 999999999997 7765554444433333223333333356678999999999999999998 7999999999887
Q ss_pred hHHH
Q 000880 736 EYEL 739 (1239)
Q Consensus 736 ~~~~ 739 (1239)
.+..
T Consensus 280 ~~~~ 283 (305)
T cd05609 280 DWNG 283 (305)
T ss_pred CHHH
Confidence 6543
No 161
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2e-35 Score=337.60 Aligned_cols=257 Identities=29% Similarity=0.435 Sum_probs=204.5
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||.|+||.||+|.++.+++.||+|.++...........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------- 76 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS------- 76 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec-------
Confidence 4689999999999999999999999999999999986554434445678899999999999999999887432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....+|++|||++++|.+++.... .+++..++.++.||+.||+|||++
T Consensus 77 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 125 (293)
T cd07843 77 -------------------------------NLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN 125 (293)
T ss_pred -------------------------------CCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 135789999999999999887644 589999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++|+
T Consensus 126 ~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di 190 (293)
T cd07843 126 WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL---------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDM 190 (293)
T ss_pred CeeeccCCHHHEEECCCCcEEEeecCceeeccCCc---------------cccccccccccccCchhhcCCccccchhhH
Confidence 99999999999999999999999999998653221 011234678999999998775557899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcC---------------------------CCCCcccc--CCHHHHHHH
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG---------------------------ELPPSWVA--KFSEQESLL 709 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~---------------------------~~p~~~~~--~~~e~~~LI 709 (1239)
||||+++|+|++ ||................+ .....+.. .++.+.++|
T Consensus 191 ~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 270 (293)
T cd07843 191 WSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLL 270 (293)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHH
Confidence 999999999997 5554333222211111000 00011112 256788999
Q ss_pred HHccCCCCCCCCCHHHHHhccCC
Q 000880 710 RRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 710 ~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
++||+.||++|||+.++++|+||
T Consensus 271 ~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 271 NRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHHhccCccccCCHHHHhcCCCC
Confidence 99999999999999999999997
No 162
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.4e-35 Score=346.13 Aligned_cols=267 Identities=24% Similarity=0.393 Sum_probs=210.5
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|++.+.||.|+||.||+|.++.+|+.||+|++............+.+|+.+|+.++||||++++++|....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------- 77 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG------- 77 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-------
Confidence 6799999999999999999999999999999999765444445567889999999999999999998763221
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
.....+|+||||++++|.+++.....+++..++.++.||+.||.|||++||
T Consensus 78 -----------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 128 (334)
T cd07855 78 -----------------------------ADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV 128 (334)
T ss_pred -----------------------------CCCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 124578999999999999999887889999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+|||++.++.+||+|||++......... ........+|+..|+|||++.+...++.++||||
T Consensus 129 vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s 197 (334)
T cd07855 129 IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-----------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWS 197 (334)
T ss_pred ecCCCCHHHEEEcCCCcEEecccccceeecccCcC-----------CCcccccccccccccChHHhcCCcccccccchHH
Confidence 99999999999999999999999999765322110 0011134578999999999876556899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhh-----------------------hcCCC-CC----ccccCCHHHHHHHHHc
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLK-----------------------QKGEL-PP----SWVAKFSEQESLLRRL 712 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~-----------------------~~~~~-p~----~~~~~~~e~~~LI~~~ 712 (1239)
|||++|||++ ||.............. ..... +. .....++++.++|++|
T Consensus 198 lG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 277 (334)
T cd07855 198 VGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQM 277 (334)
T ss_pred HHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHH
Confidence 9999999996 6644322111100000 00000 01 1134567899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCchH
Q 000880 713 MSPSPSDRPSATELLQDALPPQMEY 737 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~~~~~~ 737 (1239)
|+.+|.+|||+.++++|||+.+...
T Consensus 278 l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 278 LQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred ccCChhhCcCHHHHHhChhhhhccC
Confidence 9999999999999999999987653
No 163
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-35 Score=343.20 Aligned_cols=264 Identities=19% Similarity=0.284 Sum_probs=201.4
Q ss_pred EEeeeccC--CceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCc
Q 000880 428 ELQPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 428 ~~~~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
++++||+| +||+||++.++.+|+.||||+++...........+.+|+.+++.++||||++++++|..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~----------- 70 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA----------- 70 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-----------
Confidence 45789999 78999999999999999999997655444555678889999999999999999988743
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 71 -----------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 71 -----------------------------DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred -----------------------------CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356899999996 689998864 345899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCcchhh
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADM 661 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDI 661 (1239)
|+||||||+|||++.++.++++|||.+.......... .. .........++..|+|||++.+. ..++.++||
T Consensus 122 iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di 193 (327)
T cd08227 122 YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL--RV------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 193 (327)
T ss_pred EecCCCChhhEEEecCCcEEEcccchhhccccccccc--cc------cccccccccceecccChHHhhcccCCCCchhhH
Confidence 9999999999999999999999998765432111000 00 00001224678889999998753 358999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-------C------------------------------------C
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------L------------------------------------P 695 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-------~------------------------------------p 695 (1239)
|||||++|||++ ||.................. . .
T Consensus 194 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (327)
T cd08227 194 YSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSH 273 (327)
T ss_pred HHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccc
Confidence 999999999996 77644333322222110000 0 0
Q ss_pred CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHH
Q 000880 696 PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYEL 739 (1239)
Q Consensus 696 ~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~ 739 (1239)
+.....++++.+||.+||+.||.+|||+.++++||||.+.....
T Consensus 274 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~~~~ 317 (327)
T cd08227 274 PYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRA 317 (327)
T ss_pred ccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcchhh
Confidence 01112346788999999999999999999999999998865443
No 164
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6e-36 Score=351.82 Aligned_cols=250 Identities=27% Similarity=0.394 Sum_probs=200.2
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-C-----CceeeeeeeeeecCcc
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H-----QHVVRYYQAWFETGVA 498 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-H-----pnIv~l~~~~~e~~~~ 498 (1239)
+|++++.||+|+||+|.+|.+..|++.||||+++.. .....+...|+.+|..|+ | -|||+++++|+.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f---- 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF---- 259 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc----
Confidence 789999999999999999999999999999999743 345677888999999997 4 389999999843
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~ 576 (1239)
..++|||+|++..+|++++..+. .++...++.|+.||+.||.
T Consensus 260 ------------------------------------r~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~ 303 (586)
T KOG0667|consen 260 ------------------------------------RNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALL 303 (586)
T ss_pred ------------------------------------ccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 57899999999999999998654 5999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCC--CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 654 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 654 (1239)
+||+.||||+||||+||||... ..|||+|||.|++.... ..+++-+..|.|||++.| ..
T Consensus 304 ~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~------------------vytYiQSRfYRAPEVILG-lp 364 (586)
T KOG0667|consen 304 FLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR------------------VYTYIQSRFYRAPEVILG-LP 364 (586)
T ss_pred HHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc------------------ceeeeeccccccchhhcc-CC
Confidence 9999999999999999999764 46999999999975321 124677889999999999 56
Q ss_pred CCcchhhHHHHHHHHHhhc--CCchh-HHHHHHHHhhh------------------------------------------
Q 000880 655 IDEKADMYSLGIVFFELWH--PFSTA-MERQIVLSDLK------------------------------------------ 689 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELlt--Pf~~~-~~~~~~~~~~~------------------------------------------ 689 (1239)
|+.+.||||||||+.||++ |+.+. .+...+..+..
T Consensus 365 Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~ 444 (586)
T KOG0667|consen 365 YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSP 444 (586)
T ss_pred CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccch
Confidence 9999999999999999997 43332 22211111100
Q ss_pred ----------hcCCCCCc---cccC-----CHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 690 ----------QKGELPPS---WVAK-----FSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 690 ----------~~~~~p~~---~~~~-----~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
.....|+. +... -..+.++|++||..||.+|+|+.++|+|||+....
T Consensus 445 ~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 445 EVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred hhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 00001110 0000 12457999999999999999999999999998654
No 165
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.1e-35 Score=333.84 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=200.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHH-HHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~i-L~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++++.||+|+||.||+|.++.+|+.||||+++...... ...++..|+.. ++.++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-------- 71 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFR-------- 71 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEec--------
Confidence 47999999999999999999999999999999987543332 23456666665 666799999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
...+|++|||++++|.+++.. ...+++..++.++.||+.||+||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l 119 (283)
T cd06617 72 --------------------------------EGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL 119 (283)
T ss_pred --------------------------------CCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999999998887754 24689999999999999999999
Q ss_pred HhC-CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CC
Q 000880 579 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PK 654 (1239)
Q Consensus 579 Hs~-gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~ 654 (1239)
|++ +++||||||+|||++.++.+||+|||++....... ..+...|+..|+|||++.+. ..
T Consensus 120 H~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~ 183 (283)
T cd06617 120 HSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV----------------AKTIDAGCKPYMAPERINPELNQKG 183 (283)
T ss_pred hhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc----------------ccccccCCccccChhhcCCcccccc
Confidence 997 99999999999999999999999999987642110 11234688999999988642 33
Q ss_pred CCcchhhHHHHHHHHHhhc---CCchhHHH-HHHHHhhhhcCCCCCc-cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 655 IDEKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~~~~~~~~p~~-~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
++.++|+|||||++|+|++ ||...... +....... ...+.. ....+.++.++|.+||..+|.+||++.++++|
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 184 YDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE--EPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred cCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--cCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 6889999999999999997 66543221 22222211 111111 12356789999999999999999999999999
Q ss_pred cCCCCchHH
Q 000880 730 ALPPQMEYE 738 (1239)
Q Consensus 730 ~~~~~~~~~ 738 (1239)
+||......
T Consensus 262 ~~~~~~~~~ 270 (283)
T cd06617 262 PFFELHLSK 270 (283)
T ss_pred chhhhcccc
Confidence 999877543
No 166
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.6e-35 Score=338.66 Aligned_cols=252 Identities=26% Similarity=0.418 Sum_probs=203.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||+|+||.||++.+..+|..||+|.+.... ......++.+|+.+++.++||||++++++|..
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--------- 70 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---------
Confidence 47999999999999999999999999999999987432 33445678899999999999999999998843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs-~ 581 (1239)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||+ +
T Consensus 71 -------------------------------~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (308)
T cd06615 71 -------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH 119 (308)
T ss_pred -------------------------------CCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 357899999996 5999999888889999999999999999999998 6
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
+++||||||+|||++.++.+||+|||++...... .....+|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~~~aPE~~~~-~~~~~~~Di 181 (308)
T cd06615 120 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYTVQSDI 181 (308)
T ss_pred CEEECCCChHHEEEecCCcEEEccCCCccccccc-----------------ccccCCCCcCccChhHhcC-CCCCccchH
Confidence 9999999999999999999999999998753211 0134578999999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcC----------------------------------CCCCcc--ccCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------------------------ELPPSW--VAKF 702 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~----------------------------------~~p~~~--~~~~ 702 (1239)
|||||++|+|++ ||......... ....... ..++.. ...+
T Consensus 182 wslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (308)
T cd06615 182 WSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS 260 (308)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccC
Confidence 999999999997 66433221111 1000000 000110 1245
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 703 SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 703 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
+++.+||.+||..||++|||+.++++|+|+.+.
T Consensus 261 ~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 261 DEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 678999999999999999999999999999764
No 167
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.9e-35 Score=328.41 Aligned_cols=257 Identities=23% Similarity=0.396 Sum_probs=206.4
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC----chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
+|++.+.||.|+||+||+|... +|+.+|||.+...... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD------ 73 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec------
Confidence 4677899999999999999874 8899999998754322 2233568899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...+|++|||++ ++|.+++.+...+++..++.++.||+.||+|||
T Consensus 74 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 119 (265)
T cd06631 74 ----------------------------------DNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH 119 (265)
T ss_pred ----------------------------------CCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999996 599999988788999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+.+|+|+||||+||+++.++.++|+|||++.......... ..........||+.|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~ 189 (265)
T cd06631 120 NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG---------THSNMLKSMHGTPYWMAPEVINE-SGYGRKS 189 (265)
T ss_pred hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc---------cccccccccCCCccccChhhhcC-CCCcchh
Confidence 9999999999999999999999999999998653211100 00111234578999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|+|||||++|+|++ ||...................++.....+.++.++|.+||..+|.+||++.++++|||+
T Consensus 190 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 190 DIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred hHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99999999999997 77654443333333322233444444566789999999999999999999999999996
No 168
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-35 Score=332.39 Aligned_cols=251 Identities=24% Similarity=0.438 Sum_probs=202.4
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++.++||||+++++.+..
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-------- 77 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-------- 77 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--------
Confidence 3588999999999999999999999999999999875432 234567889999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|++||||+ ++|.+++...+.+++.+++.++.||+.||.|||++
T Consensus 78 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 125 (267)
T cd06645 78 --------------------------------RDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK 125 (267)
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356799999997 59999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCcch
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 659 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 659 (1239)
|++|+||||+||+++.++.+||+|||++....... .......||+.|+|||++.. ...++.++
T Consensus 126 ~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 190 (267)
T cd06645 126 GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLC 190 (267)
T ss_pred CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc---------------cccccccCcccccChhhhccccCCCCCchh
Confidence 99999999999999999999999999987542110 01234579999999998742 24588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCc---cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~---~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
|+|||||++|+|++ ||....+......... ....++. ....+..+.++|.+||+.+|++|||+.++++|||
T Consensus 191 DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMTK-SNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred hhHHHHHHHHHHhcCCCCcccccchhhHHhhhc-cCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 99999999999987 6654433332222211 1111221 1234567899999999999999999999999997
No 169
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.6e-35 Score=332.57 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=199.7
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++++.||+|+||.||+|.+..+++.||+|++... ........+.+|+.++++++||||+++++.+..
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLD-ITVELQKQIMSELEILYKCDSPYIIGFYGAFFV--------- 70 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecC-CChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE---------
Confidence 4688899999999999999999999999999998753 233445678999999999999999999998743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....+++|||+++ +|... ..+++..+..++.||+.||.|||++|
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ 115 (279)
T cd06619 71 -------------------------------ENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLK 115 (279)
T ss_pred -------------------------------CCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3467899999975 55433 35789999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+|+||||+|||++.++.++|+|||++...... ..+..+||+.|+|||++.+ ..++.++|+|
T Consensus 116 i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvw 177 (279)
T cd06619 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-----------------IAKTYVGTNAYMAPERISG-EQYGIHSDVW 177 (279)
T ss_pred EeeCCCCHHHEEECCCCCEEEeeCCcceecccc-----------------cccCCCCChhhcCceeecC-CCCCCcchHH
Confidence 999999999999999999999999999754211 1234579999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHH------HHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 663 SLGIVFFELWH---PFSTAMERQ------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~------~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
||||++|+|++ ||....... ...................++++.++|.+||+.||.+||++.++++|+|+.
T Consensus 178 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 178 SLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred HHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence 99999999997 665322110 111111111111111233567899999999999999999999999999998
Q ss_pred CchH
Q 000880 734 QMEY 737 (1239)
Q Consensus 734 ~~~~ 737 (1239)
+...
T Consensus 258 ~~~~ 261 (279)
T cd06619 258 QYND 261 (279)
T ss_pred cccC
Confidence 7643
No 170
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5.9e-35 Score=329.01 Aligned_cols=257 Identities=27% Similarity=0.455 Sum_probs=204.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
.+|+..+.||+|+||.||+|.+..++..||+|++..... .......+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR----- 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC-----
Confidence 478889999999999999999999999999999875432 223345788999999999999999999876432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....++++|||++ ++|.+++.....+++...+.++.||+.||+|||
T Consensus 77 ---------------------------------~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH 123 (266)
T cd06651 77 ---------------------------------AEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLH 123 (266)
T ss_pred ---------------------------------CCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1356899999997 589999988788999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+++|+||||||+||+++.++.+||+|||++......... ........++..|+|||++.+ ..++.++
T Consensus 124 ~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (266)
T cd06651 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS------------GTGIRSVTGTPYWMSPEVISG-EGYGRKA 190 (266)
T ss_pred hCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc------------CCccccCCccccccCHHHhCC-CCCCchh
Confidence 999999999999999999999999999999764321100 001123468899999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
|||||||++|||++ ||.............. ....|.......+.+.++| +||..+|++||+++++++||||+
T Consensus 191 Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 191 DVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred hhHHHHHHHHHHHHCCCCccccchHHHHHHHhc-CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 99999999999997 7765544333332221 2222222233456788888 67778999999999999999985
No 171
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-36 Score=343.90 Aligned_cols=292 Identities=24% Similarity=0.391 Sum_probs=222.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.-|..++.||-|+||+|.+++...|...||+|.+++.+.-. .....+..|-.||.....+.||++|..|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF---------- 698 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF---------- 698 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe----------
Confidence 35788999999999999999999999999999997655321 2234567799999999999999999777
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
++..++|+||+|++ |++..+|.+.+-|.+..|++|+.++..|+++.|.+
T Consensus 699 ------------------------------QDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm 748 (1034)
T KOG0608|consen 699 ------------------------------QDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM 748 (1034)
T ss_pred ------------------------------ccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 35678999999996 59999999999999999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhcccc---ccccCCCCC-CC-----------------------CCCccccC
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFP-TD-----------------------TGGVSVDG 634 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~---~~~~~~~~~-~~-----------------------~~~~~~~~ 634 (1239)
|+|||||||+|||||.+|+|||+|||||.-+..- ...+....+ .+ .....+..
T Consensus 749 GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~a 828 (1034)
T KOG0608|consen 749 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILA 828 (1034)
T ss_pred cceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhh
Confidence 9999999999999999999999999999633210 000000000 00 00011223
Q ss_pred cccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHh--hhhcCCCCCccccCCHHHHHHH
Q 000880 635 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSD--LKQKGELPPSWVAKFSEQESLL 709 (1239)
Q Consensus 635 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~--~~~~~~~p~~~~~~~~e~~~LI 709 (1239)
.+.+||+.|+|||++.. ..|+..||+||.|||||||+. ||....+.+...++ ++.. ...+...+.++++.++|
T Consensus 829 hslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~-l~~~~~~~ls~e~~~li 906 (1034)
T KOG0608|consen 829 HSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNF-LHIPYQGNLSKEALDLI 906 (1034)
T ss_pred hhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhc-cccccccccCHHHHHHH
Confidence 46799999999999998 679999999999999999994 78665544333222 2211 22234456678999999
Q ss_pred HHccCCCCCCCC---CHHHHHhccCCCCchHHHHHH----HHHhcCCCCCCcchhh
Q 000880 710 RRLMSPSPSDRP---SATELLQDALPPQMEYELLDN----ILRMMHSSEDTSIYDK 758 (1239)
Q Consensus 710 ~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~ 758 (1239)
.++. .+++.|. .+++|..||||+.+.+..+.. ++..+..+.|.+.++.
T Consensus 907 ~kLc-~sad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~ItHptDTSNFdp 961 (1034)
T KOG0608|consen 907 QKLC-CSADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPRITHPTDTSNFDP 961 (1034)
T ss_pred HHHh-cChhhhhcccchhhhhcCccccccchHhhhhccCCcCccccCCCccccCCc
Confidence 8754 4567777 578899999999998876644 4455666667666653
No 172
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8.9e-35 Score=327.19 Aligned_cols=257 Identities=28% Similarity=0.451 Sum_probs=205.6
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
++|++.+.||+|+||.||+|.+..+|..||||.+...... ......+.+|+.+++.++||||++++++|.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP----- 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC-----
Confidence 5799999999999999999999999999999998654322 23346788999999999999999999887432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....+|++|||++ ++|.+++.....+++..++.++.|++.||+|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (265)
T cd06652 77 ---------------------------------MERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH 123 (265)
T ss_pred ---------------------------------CCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1346789999996 589999988788999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+++++|+||||+|||++.++.++|+|||++......... ........||..|+|||++.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (265)
T cd06652 124 SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS------------GTGMKSVTGTPYWMSPEVISG-EGYGRKA 190 (265)
T ss_pred hCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc------------ccccccCCCCccccChhhhcC-CCCCcch
Confidence 999999999999999999999999999999864321100 001133468999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
|+|||||++|||++ ||.............. ....+......+..+.++|.+||. +|.+||+++++++|+|+.
T Consensus 191 Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 191 DIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 99999999999996 7765544333333222 222233333445678899999995 999999999999999963
No 173
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.7e-35 Score=330.29 Aligned_cols=256 Identities=22% Similarity=0.402 Sum_probs=202.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+.|++.+.||+|+||.||+|.++.+++.||+|++..... ....+.+|+.+++.+ +||||+++++.|.....
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP----- 77 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC-----
Confidence 457888999999999999999999999999999875432 245688999999998 79999999998854310
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
......+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 78 -----------------------------~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH 128 (272)
T cd06637 78 -----------------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 128 (272)
T ss_pred -----------------------------CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 012357899999997 5899988753 45899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----CCC
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKI 655 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~ 655 (1239)
+++|+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+. ..+
T Consensus 129 ~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~ 193 (272)
T cd06637 129 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 193 (272)
T ss_pred HCCCccCCCCHHHEEECCCCCEEEccCCCceeccccc---------------ccCCcccccccccCHhHhccccCcCCCC
Confidence 9999999999999999999999999999987542111 012345799999999998631 347
Q ss_pred CcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 656 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+.++|||||||++|||++ ||.............. ...........+.++.+||.+||..||.+|||+.+++.||||
T Consensus 194 ~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 194 DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 889999999999999997 6654444333332222 111111223455689999999999999999999999999997
No 174
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.5e-35 Score=346.65 Aligned_cols=259 Identities=28% Similarity=0.413 Sum_probs=203.2
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 88 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK------ 88 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC------
Confidence 57899999999999999999999999999999998654444445567889999999999999999998874321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+...+|+|||||+++|.+.+... +++..+..++.||+.||+|||++|
T Consensus 89 ----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~g 138 (353)
T cd07850 89 ----------------------------SLEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAG 138 (353)
T ss_pred ----------------------------CccccCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 00123467999999999999888654 899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||
T Consensus 139 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvw 201 (353)
T cd07850 139 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------MMTPYVVTRYYRAPEVILG-MGYKENVDIW 201 (353)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCccceeCCCCC----------------CCCCCcccccccCHHHHhC-CCCCCchhhH
Confidence 9999999999999999999999999997642211 1133468999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhh----------------------cCC--------------CCCc----cc
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQ----------------------KGE--------------LPPS----WV 699 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~----------------------~~~--------------~p~~----~~ 699 (1239)
||||++|+|++ ||............... ... .+.. ..
T Consensus 202 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (353)
T cd07850 202 SVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNK 281 (353)
T ss_pred hHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccc
Confidence 99999999996 66533221111111000 000 0000 11
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 700 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 700 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
...+.+.++|.+||+.||.+|||+.++|+|+|+..
T Consensus 282 ~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 282 LKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred cchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 22346789999999999999999999999998764
No 175
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.5e-35 Score=334.73 Aligned_cols=260 Identities=28% Similarity=0.440 Sum_probs=203.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||.|+||.||+|.+..+|+.||||+++...........+.+|+.+++.+. ||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~------ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEE------ 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecC------
Confidence 4689999999999999999999999999999998765443334467889999999995 699999998874321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~~~~~~~i~~qI~~gL~y 577 (1239)
......+|++|||++++|.+++... ..+++..++.++.||+.||.|
T Consensus 75 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~ 125 (295)
T cd07837 75 -----------------------------KNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAH 125 (295)
T ss_pred -----------------------------CCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123458999999999998887642 357999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 578 IHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
||++||+||||||+||+++. ++.+||+|||++....... ...+...+++.|+|||++.+...++
T Consensus 126 LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~ 190 (295)
T cd07837 126 CHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV---------------KSYTHEIVTLWYRAPEVLLGSTHYS 190 (295)
T ss_pred HHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc---------------cccCCcccccCCCChHHhhCCCCCC
Confidence 99999999999999999998 8899999999987542111 0112336789999999887645689
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-----------------CC--------CccccCCHHHHHH
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LP--------PSWVAKFSEQESL 708 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-----------------~p--------~~~~~~~~e~~~L 708 (1239)
.++|||||||++|+|++ ||....+............. .+ ......++++.++
T Consensus 191 ~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (295)
T cd07837 191 TPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDL 270 (295)
T ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHH
Confidence 99999999999999997 66544433333222111000 00 0112356788999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCC
Q 000880 709 LRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 709 I~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
|.+||..||.+||++.+++.|+|++
T Consensus 271 i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 271 LQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHHHccCChhhcCCHHHHhcCCCcC
Confidence 9999999999999999999999984
No 176
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=7.3e-35 Score=336.92 Aligned_cols=275 Identities=28% Similarity=0.444 Sum_probs=214.6
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||+|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------- 71 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ--------- 71 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee---------
Confidence 47899999999999999999999899999999997654332 34567889999999999999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
.....|++|||+. ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH 120 (316)
T cd05574 72 -------------------------------TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH 120 (316)
T ss_pred -------------------------------cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5999988754 56999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCC--CC------------CCCCCccccCcccccCccCCC
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--FP------------TDTGGVSVDGTGQVGTYFYTA 645 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~GT~~Y~A 645 (1239)
++|++||||||+||+++.++.++|+|||++............. .. .............+||..|+|
T Consensus 121 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~a 200 (316)
T cd05574 121 LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIA 200 (316)
T ss_pred HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcC
Confidence 9999999999999999999999999999998653221100000 00 000000112234579999999
Q ss_pred cccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 000880 646 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 722 (1239)
Q Consensus 646 PE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 722 (1239)
||++.+ ..++.++|||||||++|+|++ ||...................+. ....++.+.++|.+||..||++|||
T Consensus 201 PE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 201 PEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPG-SPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred HHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCC-ccccCHHHHHHHHHHccCCHhHCCC
Confidence 999987 568999999999999999997 77655544444443332222332 2235678999999999999999999
Q ss_pred ----HHHHHhccCCCCchHHHH
Q 000880 723 ----ATELLQDALPPQMEYELL 740 (1239)
Q Consensus 723 ----a~eiL~~~~~~~~~~~~~ 740 (1239)
++++++|+||.+..+..+
T Consensus 279 ~~~~~~~ll~~~~~~~~~~~~~ 300 (316)
T cd05574 279 SKRGAAEIKQHPFFRGVNWALI 300 (316)
T ss_pred chhhHHHHHcCchhhcCChhhc
Confidence 999999999998876543
No 177
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.3e-35 Score=332.75 Aligned_cols=257 Identities=26% Similarity=0.388 Sum_probs=204.6
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
|+..+.||+|+||+||+|.+..+++.||+|++....... .....+.+|+.+|+.++|+||+++++++..
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~---------- 71 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET---------- 71 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec----------
Confidence 677899999999999999999999999999987543222 223457889999999999999999887632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...++++|||++ ++|.+++... ..+++..+..++.|++.||.|||++
T Consensus 72 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 121 (285)
T cd05632 72 ------------------------------KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121 (285)
T ss_pred ------------------------------CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 357899999997 5888877543 3699999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+||+++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++|+
T Consensus 122 ~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~~~aPE~~~~-~~~~~~~Di 184 (285)
T cd05632 122 NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----------------SIRGRVGTVGYMAPEVLNN-QRYTLSPDY 184 (285)
T ss_pred CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC----------------cccCCCCCcCccChHHhcC-CCCCcccch
Confidence 99999999999999999999999999987532110 1123579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALP 732 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~ 732 (1239)
|||||++|||++ ||....+............. .+......++++.+|+.+||+.||.+||+ +.+++.|+||
T Consensus 185 ~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~ 264 (285)
T cd05632 185 WGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFF 264 (285)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhh
Confidence 999999999996 77654433221111111111 11122345678899999999999999999 8999999999
Q ss_pred CCchHHH
Q 000880 733 PQMEYEL 739 (1239)
Q Consensus 733 ~~~~~~~ 739 (1239)
..+.+..
T Consensus 265 ~~~~~~~ 271 (285)
T cd05632 265 RNMNFKR 271 (285)
T ss_pred hcCCHHH
Confidence 9987653
No 178
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=7.2e-35 Score=327.13 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=208.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||.|+||+||+|.+..++..+|+|++....... ....+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV--------- 70 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee---------
Confidence 47999999999999999999999899999999987544433 56789999999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....|++|||++ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh 119 (267)
T cd06610 71 -------------------------------GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119 (267)
T ss_pred -------------------------------CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 5899988753 45899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++||||||+||++++++.++|+|||++..+....... .......+|++.|+|||++.....++.++
T Consensus 120 ~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~-----------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~ 188 (267)
T cd06610 120 SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT-----------RKVRKTFVGTPCWMAPEVMEQVHGYDFKA 188 (267)
T ss_pred hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc-----------ccccccccCChhhcChHHHccccCcCccc
Confidence 9999999999999999999999999999998764322110 00123347899999999988744689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-CCCc--cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPS--WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-~p~~--~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|+|||||++|+|++ ||.................. .+.. +...++.+.+++.+||..||++|||+.++++||||
T Consensus 189 Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 189 DIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred chHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 99999999999997 77655544444433332211 1111 12456788999999999999999999999999997
No 179
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7.5e-35 Score=330.92 Aligned_cols=255 Identities=29% Similarity=0.463 Sum_probs=203.9
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||.|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||+++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH---------- 70 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec----------
Confidence 5889999999999999999999999999999998665444556789999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
...+|+||||++++|.+++.. ...+++..++.++.||+.||+|||++|+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 120 (286)
T cd07832 71 ------------------------------GSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120 (286)
T ss_pred ------------------------------CCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 457899999997799998864 4569999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+|+||||+||+++.++.++|+|||++........ .......|+..|+|||++.+...++.++||||
T Consensus 121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 186 (286)
T cd07832 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEP--------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWA 186 (286)
T ss_pred ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--------------CccccccCcccccCceeeeccccCCchhHHHH
Confidence 9999999999999999999999999986532110 01133478999999999876556789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-------------------CC--------CccccCCHHHHHHHHHcc
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LP--------PSWVAKFSEQESLLRRLM 713 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-------------------~p--------~~~~~~~~e~~~LI~~~L 713 (1239)
+||++|||++ ||....+.......+..... .+ .........+.++|.+||
T Consensus 187 lG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 266 (286)
T cd07832 187 VGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLL 266 (286)
T ss_pred HHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHh
Confidence 9999999997 44333332222111110000 00 011234467899999999
Q ss_pred CCCCCCCCCHHHHHhccCCC
Q 000880 714 SPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~~~~~ 733 (1239)
+.||.+|||++++++||||.
T Consensus 267 ~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 267 VYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccChhhCCCHHHHhhCcCcC
Confidence 99999999999999999983
No 180
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.4e-35 Score=336.25 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=192.3
Q ss_pred CCceEEeeeccCCceEEEEEEEcc----------------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceee
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 487 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~----------------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~ 487 (1239)
++|++.++||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+|+.++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 578899999999999999998642 3447999998743 23334567999999999999999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC---------
Q 000880 488 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 557 (1239)
Q Consensus 488 l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 557 (1239)
++++|.+ ...+|++||||+ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (304)
T cd05096 84 LLGVCVD----------------------------------------EDPLCMITEYMENGDLNQFLSSHHLDDKEENGN 123 (304)
T ss_pred EEEEEec----------------------------------------CCceEEEEecCCCCcHHHHHHhccccccccccc
Confidence 9998743 245799999996 69998885431
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCC
Q 000880 558 ----------HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDT 627 (1239)
Q Consensus 558 ----------~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~ 627 (1239)
.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~---------- 193 (304)
T cd05096 124 DAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY---------- 193 (304)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce----------
Confidence 367788999999999999999999999999999999999999999999999975422110
Q ss_pred CCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc-----CCchhHHHHHHHHh---hhhc--CCCCCc
Q 000880 628 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSD---LKQK--GELPPS 697 (1239)
Q Consensus 628 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~---~~~~--~~~p~~ 697 (1239)
........+++.|||||++.+ ..++.++|||||||++|||++ ||......+..... .... ...+..
T Consensus 194 ---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (304)
T cd05096 194 ---YRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFR 269 (304)
T ss_pred ---eEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccC
Confidence 001123456889999999876 568999999999999999974 66654433322111 1111 111122
Q ss_pred cccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 698 WVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 698 ~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
...+++.+.+||.+||+.||.+|||+.+|.+
T Consensus 270 ~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 270 PPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 2345678999999999999999999999964
No 181
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.3e-35 Score=334.22 Aligned_cols=255 Identities=27% Similarity=0.412 Sum_probs=202.8
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.|+..+.||+|+||.||+|.+..+++.||||.+...... ......+.+|+.+++.++|+||+++++.+..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--------- 71 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec---------
Confidence 377889999999999999999999999999998754322 2223457889999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|++|||++ ++|.+++... ..+++..+..++.|++.||.|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05630 72 -------------------------------KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ 120 (285)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999996 6898888543 358999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+||+||||||+||+++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05630 121 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------TIKGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc----------------cccCCCCCccccChHHHcC-CCCCCccc
Confidence 999999999999999999999999999987532110 1123479999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHH---HHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 000880 661 MYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 729 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~---~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 729 (1239)
||||||++|+|++ ||...... ........ .. ........++++.+||.+||+.||.+||| +.++++|
T Consensus 184 iwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 184 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-EV-QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh-hh-hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 9999999999996 77643221 11111111 00 01122345678999999999999999999 9999999
Q ss_pred cCCCCchHH
Q 000880 730 ALPPQMEYE 738 (1239)
Q Consensus 730 ~~~~~~~~~ 738 (1239)
+||.+..+.
T Consensus 262 ~~~~~~~~~ 270 (285)
T cd05630 262 PLFKQINFK 270 (285)
T ss_pred hhhhccCHH
Confidence 999887655
No 182
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.7e-35 Score=333.68 Aligned_cols=254 Identities=26% Similarity=0.433 Sum_probs=201.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||+|+||.||+|.++.+++.||+|++............+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR---------- 70 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc----------
Confidence 4789999999999999999999989999999998655444344567889999999999999999998873
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....+|+||||+++ +|..+......+++..++.++.||+.||+|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (286)
T cd07846 71 ------------------------------RKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN 120 (286)
T ss_pred ------------------------------cCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 24578999999976 56666666667999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++||||+|+||+++.++.++|+|||++....... ...+...++..|+|||++.+...++.++|||
T Consensus 121 i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (286)
T cd07846 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIW 185 (286)
T ss_pred ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---------------cccCcccceeeccCcHHhccccccCchHhHH
Confidence 9999999999999999999999999987642211 0123356899999999987655678999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhh-------------------cCCCC---------CccccCCHHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQ-------------------KGELP---------PSWVAKFSEQESLLRR 711 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~-------------------~~~~p---------~~~~~~~~e~~~LI~~ 711 (1239)
||||++|||++ ||............... ....+ ..++..+..+.+|+.+
T Consensus 186 slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07846 186 AVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQ 265 (286)
T ss_pred HHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHH
Confidence 99999999997 55433322211111100 00000 0123445688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCC
Q 000880 712 LMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~ 732 (1239)
||+.+|.+||++.++++|+||
T Consensus 266 ~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 266 CLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HhcCCcccchhHHHHhcCCCC
Confidence 999999999999999999997
No 183
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.2e-35 Score=329.97 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=201.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .....+.+|+.+++.++||||+++++.+..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-------- 77 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLS-------- 77 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEe--------
Confidence 4689999999999999999999999999999999875432 234567899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||++ ++|.+++.....+++..+..++.|++.||.|||++
T Consensus 78 --------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 125 (267)
T cd06646 78 --------------------------------REKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK 125 (267)
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999997 58999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCcch
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 659 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 659 (1239)
||+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+ ...++.++
T Consensus 126 ~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 190 (267)
T cd06646 126 GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI---------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLC 190 (267)
T ss_pred CccccCCCHHHEEECCCCCEEECcCccceeecccc---------------cccCccccCccccCHhHcccccCCCCcchh
Confidence 99999999999999999999999999998642111 01133578999999998853 23478899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC--CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~--p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
|||||||++|||++ ||................... +......+..+.++|++||+.+|.+|||++++++|+|
T Consensus 191 Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred hHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99999999999997 664433322221111111111 1112234578999999999999999999999999976
No 184
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.7e-35 Score=325.79 Aligned_cols=251 Identities=26% Similarity=0.449 Sum_probs=203.7
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||.|+||.||+|.+..+++.+|+|++...... ....+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLR--------- 71 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEe---------
Confidence 6899999999999999999999989999999999765432 45678999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|++|||+++ +|.+++... ..+++..++.++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 120 (262)
T cd06613 72 -------------------------------RDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET 120 (262)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999974 898888765 6899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCCcch
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKA 659 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~~ks 659 (1239)
|++|+||||+||+++.++.+||+|||++....... .......++..|+|||.+.+. +.++.++
T Consensus 121 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~ 185 (262)
T cd06613 121 GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYDGKC 185 (262)
T ss_pred CceecCCChhhEEECCCCCEEECccccchhhhhhh---------------hccccccCCccccCchhhcccccCCcCchh
Confidence 99999999999999999999999999998643211 011234788999999998763 2688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC--CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~--~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
|+|||||++|||++ ||.................. ........+.++.++|.+||..+|.+|||+.+++.|+|
T Consensus 186 Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 186 DIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99999999999997 66655443333222221111 11122234567899999999999999999999999987
No 185
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.5e-35 Score=333.64 Aligned_cols=259 Identities=27% Similarity=0.466 Sum_probs=204.0
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+++|++.+.||+|+||.||+|.++.+|+.||+|.+............+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-------- 72 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec--------
Confidence 368999999999999999999999999999999987554433344678899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHh
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~--l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
....|+||||++++|.+.+..... +++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 120 (294)
T PLN00009 73 --------------------------------EKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS 120 (294)
T ss_pred --------------------------------CCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999899888865443 5788899999999999999999
Q ss_pred CCccccCCCcccEEEcC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 581 QGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++++||||||+||+++. ++.+||+|||++....... ...+...|++.|+|||++.+...++.++
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 185 (294)
T PLN00009 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV---------------RTFTHEVVTLWYRAPEILLGSRHYSTPV 185 (294)
T ss_pred CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc---------------cccccCceeecccCHHHHhCCCCCCcHH
Confidence 99999999999999985 4579999999997542110 0113346789999999987645588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC------------------C---CC-----ccccCCHHHHHHHH
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------L---PP-----SWVAKFSEQESLLR 710 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~------------------~---p~-----~~~~~~~e~~~LI~ 710 (1239)
|||||||++|+|++ ||.................. . ++ .....++++.++|.
T Consensus 186 Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (294)
T PLN00009 186 DIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLS 265 (294)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHH
Confidence 99999999999997 66544333333222111000 0 00 11234567899999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 000880 711 RLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
+||+.+|.+||++.++++|+||....
T Consensus 266 ~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 266 KMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred HHccCChhhCcCHHHHhcCchHhHHh
Confidence 99999999999999999999987653
No 186
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.2e-35 Score=331.18 Aligned_cols=255 Identities=27% Similarity=0.373 Sum_probs=204.5
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
-|++.+.||.|+||.||+|.+..++..+|+|.+... .......+.+|+.+++.++||||+++++.|..
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~---------- 73 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY---------- 73 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee----------
Confidence 367889999999999999999999999999988643 23445678899999999999999999988743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....|+||||++ ++|..++.. ...+++..++.++.||+.||.|||+.|
T Consensus 74 ------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ 123 (282)
T cd06643 74 ------------------------------ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK 123 (282)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346799999997 577777654 456999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCcc
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDEK 658 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~k 658 (1239)
++||||||+|||++.++.+||+|||++....... .......||+.|+|||++.. ...++.+
T Consensus 124 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 188 (282)
T cd06643 124 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 188 (282)
T ss_pred eeecCCCcccEEEccCCCEEEccccccccccccc---------------cccccccccccccCHhhccccCCCCCCCCcc
Confidence 9999999999999999999999999987542110 01233578999999999842 2347789
Q ss_pred hhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 659 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 659 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
+|||||||++|||++ ||..........................+.++.++|.+||+.||.+||++.++++|+|+...
T Consensus 189 ~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 189 ADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred chhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 999999999999996 77665554444443332222222223456789999999999999999999999999998765
Q ss_pred h
Q 000880 736 E 736 (1239)
Q Consensus 736 ~ 736 (1239)
.
T Consensus 269 ~ 269 (282)
T cd06643 269 S 269 (282)
T ss_pred C
Confidence 4
No 187
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=8.3e-35 Score=332.56 Aligned_cols=257 Identities=27% Similarity=0.398 Sum_probs=205.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
+.|+++++||.|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++..
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 80 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYW--------- 80 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe---------
Confidence 5689999999999999999999999999999998643 33456678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||+++ +|..++.+ ...+++..++.++.||+.||+|||++
T Consensus 81 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 129 (292)
T cd06644 81 -------------------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM 129 (292)
T ss_pred -------------------------------CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3468999999975 77776654 45689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 657 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 657 (1239)
|++||||||+||+++.++.+||+|||++....... .......+++.|+|||++.+ ...++.
T Consensus 130 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 194 (292)
T cd06644 130 KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL---------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDY 194 (292)
T ss_pred CeeecCCCcceEEEcCCCCEEEccCccceeccccc---------------cccceecCCccccCceeeccccccCCCCCc
Confidence 99999999999999999999999999987532110 11234568899999999853 234688
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
++|||||||++|||++ ||..........................+.++.++|.+||..||++||++.++++|+|+..
T Consensus 195 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 195 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred hhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 9999999999999997 6665544443333322211111222345578999999999999999999999999999987
Q ss_pred chH
Q 000880 735 MEY 737 (1239)
Q Consensus 735 ~~~ 737 (1239)
...
T Consensus 275 ~~~ 277 (292)
T cd06644 275 VTS 277 (292)
T ss_pred ccc
Confidence 654
No 188
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.6e-35 Score=332.27 Aligned_cols=256 Identities=29% Similarity=0.443 Sum_probs=206.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||.|+||.||+|.+..++..||+|.+... .......+.+|+.+++.++||||+++++.+..
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFY--------- 73 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEec---------
Confidence 5789999999999999999999989999999998743 33345678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||+++ +|.+++... ..+++..++.++.|++.||.|||++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 74 -------------------------------ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred -------------------------------CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3567999999974 898888764 4699999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 657 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 657 (1239)
||+||||||+||+++.++.++|+|||++....... .......||+.|+|||++.. ...++.
T Consensus 123 ~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 187 (280)
T cd06611 123 KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL---------------QKRDTFIGTPYWMAPEVVACETFKDNPYDY 187 (280)
T ss_pred CcccCCCChhhEEECCCCCEEEccCccchhhcccc---------------cccceeecchhhcCHHHHhhcccCCCCCCc
Confidence 99999999999999999999999999987542111 01234578999999998752 134678
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
++|+|||||++|||++ ||..........................+.++.++|.+||+.+|.+||++.++++|+|+..
T Consensus 188 ~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 188 KADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred cccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 9999999999999997 7765544443333322111111122345678999999999999999999999999999987
Q ss_pred ch
Q 000880 735 ME 736 (1239)
Q Consensus 735 ~~ 736 (1239)
..
T Consensus 268 ~~ 269 (280)
T cd06611 268 QS 269 (280)
T ss_pred cc
Confidence 63
No 189
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.8e-36 Score=322.36 Aligned_cols=265 Identities=22% Similarity=0.385 Sum_probs=206.5
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCC----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecC
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 496 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~ 496 (1239)
..+..|+.+..||+|.||.||+|..+.++ +.||||+++-............||+.+++.++||||+.+..+|..+
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~- 99 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH- 99 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-
Confidence 34678999999999999999999665443 3799999976544444566788999999999999999998887542
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-----CCCCHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQI 571 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~~~~~~~i~~qI 571 (1239)
...+++++||.+.+|..+++-. ..++...++.++.||
T Consensus 100 --------------------------------------d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQi 141 (438)
T KOG0666|consen 100 --------------------------------------DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQI 141 (438)
T ss_pred --------------------------------------CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHH
Confidence 4678999999999999998632 358999999999999
Q ss_pred HHHHHHHHhCCccccCCCcccEEEcCC----CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 000880 572 VEGLAHIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 647 (1239)
Q Consensus 572 ~~gL~yLHs~gIiHrDLKp~NILl~~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 647 (1239)
+.|+.|||++-|+||||||.|||+..+ |.|||+|||+|+.+..+-.. .......+-|.+|.|||
T Consensus 142 l~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp------------l~s~d~VVVTiWYRAPE 209 (438)
T KOG0666|consen 142 LDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP------------LASLDPVVVTIWYRAPE 209 (438)
T ss_pred HhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc------------cccCCceEEEEEecChH
Confidence 999999999999999999999999888 89999999999987544211 11234467899999999
Q ss_pred cccCCCCCCcchhhHHHHHHHHHhhc--CCchhHHH-------------HHHHHh------------------------h
Q 000880 648 IEQGWPKIDEKADMYSLGIVFFELWH--PFSTAMER-------------QIVLSD------------------------L 688 (1239)
Q Consensus 648 ~l~~~~~~~~ksDIwSlGviL~ELlt--Pf~~~~~~-------------~~~~~~------------------------~ 688 (1239)
.|.|...|+++.||||+|||+.||++ |.....+. ...+.. .
T Consensus 210 LLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f 289 (438)
T KOG0666|consen 210 LLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDF 289 (438)
T ss_pred HhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHh
Confidence 99998889999999999999999986 32211110 000110 0
Q ss_pred hhcCCCCC-------ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 689 KQKGELPP-------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 689 ~~~~~~p~-------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
......+. .+...++.+.+|+.+||..||.+|.|++++|+|++|..++
T Consensus 290 ~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 290 RRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred HHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 00000010 1112334577999999999999999999999999998774
No 190
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.7e-35 Score=331.25 Aligned_cols=252 Identities=28% Similarity=0.468 Sum_probs=201.9
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCc
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
|++.+.||.|++|.||+|.++.+|..||||++............+.+|+.+++.++||||+++++++..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~----------- 69 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS----------- 69 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-----------
Confidence 567889999999999999999999999999998654444445678899999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....|++|||++++|.+++.... .+++..++.++.||+.||+|||++++
T Consensus 70 -----------------------------~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~ 120 (283)
T cd07835 70 -----------------------------ENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV 120 (283)
T ss_pred -----------------------------CCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 35789999999989999987765 69999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||+|+||+++.++.++|+|||++....... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 185 (283)
T cd07835 121 LHRDLKPQNLLIDREGALKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWS 185 (283)
T ss_pred eCCCCCHHHEEEcCCCcEEEeecccccccCCCc---------------cccCccccccCCCCCceeecCcccCcHHHHHH
Confidence 999999999999999999999999997542111 01123467899999998876455789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcC--------------------------CCCCccccCCHHHHHHHHHccC
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRRLMS 714 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~--------------------------~~p~~~~~~~~e~~~LI~~~L~ 714 (1239)
|||++|+|++ ||................. .........++.+.++|.+||+
T Consensus 186 lG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (283)
T cd07835 186 IGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLV 265 (283)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhc
Confidence 9999999997 6654433222222111000 0001123345688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 000880 715 PSPSDRPSATELLQDALP 732 (1239)
Q Consensus 715 ~dP~~RPta~eiL~~~~~ 732 (1239)
.||.+|||+.++++|+||
T Consensus 266 ~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 266 YDPAKRISAKAALQHPYF 283 (283)
T ss_pred CChhhCcCHHHHhcCCCC
Confidence 999999999999999997
No 191
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.8e-35 Score=331.45 Aligned_cols=254 Identities=25% Similarity=0.428 Sum_probs=198.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+++|++.+.||.|+||.||+|.++.+++.||||.+...... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 73 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIH--------- 73 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEe---------
Confidence 57899999999999999999999989999999998754322 22345678999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
.....|+||||++++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~ 122 (291)
T cd07844 74 -------------------------------TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR 122 (291)
T ss_pred -------------------------------cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 24578999999999999988754 4689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||
T Consensus 123 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv 187 (291)
T cd07844 123 RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS---------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDM 187 (291)
T ss_pred CeecccCCHHHEEEcCCCCEEECccccccccCCCC---------------ccccccccccccCCcHHhhcCcccCcHHHH
Confidence 99999999999999999999999999987532111 011233578899999998765568899999
Q ss_pred HHHHHHHHHhhc---CCchhHH-HHHHHHhhhhcCC-------------------C----CC----ccccCC--HHHHHH
Q 000880 662 YSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGE-------------------L----PP----SWVAKF--SEQESL 708 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~-~~~~~~~~~~~~~-------------------~----p~----~~~~~~--~e~~~L 708 (1239)
|||||++|+|++ ||..... .+........... . +. ...... +++.++
T Consensus 188 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (291)
T cd07844 188 WGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEEL 267 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHH
Confidence 999999999996 6643321 1111111000000 0 00 001122 677899
Q ss_pred HHHccCCCCCCCCCHHHHHhccCC
Q 000880 709 LRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 709 I~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|.+||+.+|.+|||+.++++|+||
T Consensus 268 i~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 268 ALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred HHHHhccCcccccCHHHHhcCCCC
Confidence 999999999999999999999997
No 192
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.3e-34 Score=325.85 Aligned_cols=255 Identities=31% Similarity=0.519 Sum_probs=204.9
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCc-------hhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-------PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-------~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
|.+...||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD---- 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe----
Confidence 566789999999999999999899999999987543321 123568899999999999999999988733
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
..+.+++|||++ ++|.+++.....+++..+..++.|++.||+|
T Consensus 78 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~ 121 (267)
T cd06628 78 ------------------------------------ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNY 121 (267)
T ss_pred ------------------------------------CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence 356789999996 5899999888889999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++|++||||||+||+++.++.++|+|||+++......... ..........|++.|+|||.+.+ ..++.
T Consensus 122 lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~y~~pe~~~~-~~~~~ 191 (267)
T cd06628 122 LHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLST---------KTNGARPSLQGSVFWMAPEVVKQ-TSYTR 191 (267)
T ss_pred HHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccC---------CccccccccCCCcCccChhHhcc-CCCCc
Confidence 999999999999999999999999999999998654211100 00011223568999999999987 56889
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
++|+|||||++|+|++ ||.............. ...+......+..+.++|++||+.||.+||++.++++|+||
T Consensus 192 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 192 KADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE--NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred hhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc--cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999999999999996 7765544333332221 22333334456789999999999999999999999999996
No 193
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-34 Score=332.41 Aligned_cols=254 Identities=22% Similarity=0.392 Sum_probs=205.8
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..+|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.+.||||+++++.|..
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-------- 88 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV-------- 88 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEEe--------
Confidence 3689999999999999999999999999999999875443 234678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....|+||||++ ++|.+++.. ..+++.++..++.|++.||+|||++
T Consensus 89 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~ 135 (296)
T cd06654 89 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN 135 (296)
T ss_pred --------------------------------CCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346899999996 589988854 4689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++||
T Consensus 136 gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 199 (296)
T cd06654 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 199 (296)
T ss_pred CcccCCCCHHHEEEcCCCCEEECccccchhccccc---------------cccCcccCCccccCHHHHcC-CCCCccchH
Confidence 99999999999999999999999999987642211 01123478999999999887 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
|||||++|+|++ ||....................+.....++.+.++|.+||..||.+|||+.++++|+|+...
T Consensus 200 ~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 999999999997 77655443333222221111112233456788999999999999999999999999998643
No 194
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.4e-35 Score=348.41 Aligned_cols=251 Identities=24% Similarity=0.303 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCceEEEEEEE-----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 496 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~-----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~ 496 (1239)
.++|++.+.||+|+||.||+|++ ..++..||||+++... .......+.+|+.+|+.+ +||||++++++|..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTV-- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--
Confidence 35799999999999999999975 3456789999986433 233456788999999999 89999999998743
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC------------------
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 557 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 557 (1239)
....|+|||||+ |+|.+++....
T Consensus 111 --------------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 152 (375)
T cd05104 111 --------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYK 152 (375)
T ss_pred --------------------------------------CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHH
Confidence 245689999996 68888875421
Q ss_pred ---------------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHh
Q 000880 558 ---------------------------------------------------------HFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 558 ---------------------------------------------------------~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
.+++..++.++.||+.||+|||+
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 232 (375)
T cd05104 153 NLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS 232 (375)
T ss_pred hhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36788899999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||++.+ ..++.++|
T Consensus 233 ~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sD 298 (375)
T cd05104 233 KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-------------YVVKGNARLPVKWMAPESIFN-CVYTFESD 298 (375)
T ss_pred CCeeccCCchhhEEEECCCcEEEecCccceeccCccc-------------ccccCCCCCCcceeChhHhcC-CCCCCCCC
Confidence 9999999999999999999999999999976432110 000112345678999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 661 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 661 IwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
||||||++|||++ ||............+. .+..+......++++.+||.+||+.||++|||+.++++.
T Consensus 299 i~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 299 VWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK-EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH-hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999985 6655443333333333 222222223345789999999999999999999999874
No 195
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-35 Score=339.04 Aligned_cols=257 Identities=27% Similarity=0.449 Sum_probs=207.7
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
-..|+++++||+||.++||++... +.+.||+|++.....+.....-+.+|+..|.+| .|.+||++|++=+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-------- 430 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-------- 430 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec--------
Confidence 357999999999999999999886 567888888776666767778899999999999 5999999997631
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK-ELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~-~~~~~i~~qI~~gL~yLHs 580 (1239)
...++||||||-+.+|..+|.+...... -..+.|..|++.|+.++|.
T Consensus 431 --------------------------------~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~ 478 (677)
T KOG0596|consen 431 --------------------------------TDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQ 478 (677)
T ss_pred --------------------------------cCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH
Confidence 2578999999999999999998766433 4788999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-------
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------- 653 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------- 653 (1239)
+||||-||||.|+|+- .|.+||+|||+|..+... ..++...+.+||+.|||||++....
T Consensus 479 ~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D-------------TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~ 544 (677)
T KOG0596|consen 479 HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD-------------TTSIVKDSQVGTVNYMSPEALTDMSSSRENGK 544 (677)
T ss_pred hceeecCCCcccEEEE-eeeEEeeeechhcccCcc-------------ccceeeccccCcccccCHHHHhhccccccCCC
Confidence 9999999999999985 599999999999876432 2334456789999999999986421
Q ss_pred ---CCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc-C--CCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 000880 654 ---KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-G--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 724 (1239)
Q Consensus 654 ---~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~-~--~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 724 (1239)
+.++++||||||||||+|++ ||....+....+..+... . .+|... .. .++.++++.||..||++|||..
T Consensus 545 ~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~-~~-~~li~~mK~CL~rdPkkR~si~ 622 (677)
T KOG0596|consen 545 SKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIP-EN-DELIDVMKCCLARDPKKRWSIP 622 (677)
T ss_pred cceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCC-Cc-hHHHHHHHHHHhcCcccCCCcH
Confidence 25689999999999999994 888776555544444322 1 223221 11 2489999999999999999999
Q ss_pred HHHhccCCCCch
Q 000880 725 ELLQDALPPQME 736 (1239)
Q Consensus 725 eiL~~~~~~~~~ 736 (1239)
++|+|||.....
T Consensus 623 eLLqhpFl~~~~ 634 (677)
T KOG0596|consen 623 ELLQHPFLQIQP 634 (677)
T ss_pred HHhcCccccccc
Confidence 999999887643
No 196
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.9e-34 Score=322.38 Aligned_cols=250 Identities=33% Similarity=0.532 Sum_probs=208.8
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|+.++.||.|+||.||.+++..+++.+++|.+.....+......+.+|+.++++++||||+++++++.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---------- 70 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD---------- 70 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec----------
Confidence 4889999999999999999999999999999998766555666788999999999999999999998843
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...++++||||+ ++|.+++... ..+++..+..++.|++.||.|||++
T Consensus 71 ------------------------------~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 71 ------------------------------DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred ------------------------------CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999996 5999998764 4589999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+||+++.++.+||+|||++........ ......|++.|+|||.+.+ ..++.++|+
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~---------------~~~~~~~~~~y~ape~~~~-~~~~~~~Dv 184 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS---------------MAETVVGTPYYMSPELCQG-VKYNFKSDI 184 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCcceEEcccccc---------------cccccCCCccccCHhhcCC-CCCCCcchh
Confidence 999999999999999999999999999976432110 1234578999999999887 458899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
||||+++|||++ ||......+....... +..++.....+.++.++|.+||..+|.+||++.++++|+|+
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 185 WALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999997 6655444444433332 33333334566789999999999999999999999999875
No 197
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=7.7e-35 Score=340.13 Aligned_cols=265 Identities=26% Similarity=0.370 Sum_probs=204.5
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||+|+||.||+|.+..+|+.||||+++... .......+.+|+.+++.++||||+++++.+....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 76 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPS------ 76 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeeccc------
Confidence 368999999999999999999999999999999986422 2234567889999999999999999998764321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 77 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 77 -----------------------------FESFNDVYIVQELMETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred -----------------------------ccccceEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 012346799999999999887754 56999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+|||++.++.+||+|||++......... ........||+.|+|||++.+...++.++|||
T Consensus 127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 194 (336)
T cd07849 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH------------TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIW 194 (336)
T ss_pred eeccCCCHHHEEECCCCCEEECcccceeeccccccc------------cCCcCCcCcCCCccChHHhhCCCCCCcHHHHH
Confidence 999999999999999999999999999764321100 00123457899999999876545689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhh-----------------------h---hcCCCC--CccccCCHHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDL-----------------------K---QKGELP--PSWVAKFSEQESLLRR 711 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~-----------------------~---~~~~~p--~~~~~~~~e~~~LI~~ 711 (1239)
||||++|+|++ ||............. . .....+ ...+..++++.++|.+
T Consensus 195 slGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 274 (336)
T cd07849 195 SVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDK 274 (336)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHH
Confidence 99999999997 664322111110000 0 000000 0112345678999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 000880 712 LMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||+.||.+|||+.++++|||+.+..
T Consensus 275 ~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 275 MLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HcCCChhhCcCHHHHhcCccccccC
Confidence 9999999999999999999998663
No 198
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=6.9e-35 Score=333.88 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=203.6
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
+|++.+.||+|+||.||+|.+..+|+.||||.++..... ......+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------- 73 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH------- 73 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-------
Confidence 478889999999999999999989999999999765433 3344567889999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|+||||++++|.+++.... .+++..++.++.||+.||.|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~ 120 (298)
T cd07841 74 ---------------------------------KSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS 120 (298)
T ss_pred ---------------------------------CCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 35789999999889999998766 79999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+||+|+||||+|||++.++.++|+|||+++...... .......+++.|+|||.+.+...++.++|
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 185 (298)
T cd07841 121 NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN---------------RKMTHQVVTRWYRAPELLFGARHYGVGVD 185 (298)
T ss_pred CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC---------------ccccccccceeeeCHHHHhCCCCCCcHHH
Confidence 999999999999999999999999999998653211 01122357889999999876456889999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC--------------------CC-----CccccCCHHHHHHHHHc
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--------------------LP-----PSWVAKFSEQESLLRRL 712 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~--------------------~p-----~~~~~~~~e~~~LI~~~ 712 (1239)
+|||||++|||++ ||....+............. .+ ..+...+.++.++|.+|
T Consensus 186 v~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (298)
T cd07841 186 MWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRL 265 (298)
T ss_pred HHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHH
Confidence 9999999999997 34332222211111110000 00 01123356788999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 000880 713 MSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|+.||++|||+.++++|+||.+..
T Consensus 266 l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 266 LTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred hcCCcccCcCHHHHhhCccccCCC
Confidence 999999999999999999998864
No 199
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.4e-34 Score=332.89 Aligned_cols=275 Identities=27% Similarity=0.379 Sum_probs=208.5
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.+++|++.+.||.|+||.||+|.++.+++.||||++............+.+|+.+++.++||||+++++.+.+...
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 81 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD---- 81 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc----
Confidence 3689999999999999999999999999999999987654433334467889999999999999999987754310
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
........+|++|+|++++|...+.. ...+++..++.++.||+.||+|||+
T Consensus 82 ----------------------------~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 133 (311)
T cd07866 82 ----------------------------KSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE 133 (311)
T ss_pred ----------------------------cccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00123457899999999888887765 3479999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+||+||||||+|||++.++.+||+|||++............ .........+...||+.|+|||++.+...++.++|
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 209 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG----GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVD 209 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccccc----CCcccccccccceeccCcCChHHhhCCCccCchhH
Confidence 99999999999999999999999999999865432211000 00001122345678999999998876456899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-----------------------CCC----ccccCCHHHHHHHH
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------------LPP----SWVAKFSEQESLLR 710 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-----------------------~p~----~~~~~~~e~~~LI~ 710 (1239)
||||||++|||++ ||................+. .++ .+....+.+.++|.
T Consensus 210 v~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 289 (311)
T cd07866 210 IWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLS 289 (311)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHH
Confidence 9999999999997 55443333222211110000 010 11223357889999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 000880 711 RLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+||..||.+|||+.+++.|+||
T Consensus 290 ~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 290 KLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHcccCcccCcCHHHHhcCCCC
Confidence 9999999999999999999997
No 200
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.6e-35 Score=325.58 Aligned_cols=249 Identities=27% Similarity=0.470 Sum_probs=202.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||.|+||.||+|.+..+++.||+|.++.... ...+.+|+.+++.++||||+++++.+..
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------- 69 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFK--------- 69 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeec---------
Confidence 678999999999999999999998899999999864321 5689999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||.|||++
T Consensus 70 -------------------------------~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~ 118 (256)
T cd06612 70 -------------------------------NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118 (256)
T ss_pred -------------------------------CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 589998875 45689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
+++||||+|+||+++.++.++|+|||++........ ......|+..|+|||++.+ ..++.++||
T Consensus 119 ~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di 182 (256)
T cd06612 119 KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA---------------KRNTVIGTPFWMAPEVIQE-IGYNNKADI 182 (256)
T ss_pred CcccCCCCcceEEECCCCcEEEcccccchhcccCcc---------------ccccccCCccccCHHHHhc-CCCCchhhH
Confidence 999999999999999999999999999986532110 1123458899999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|||||++|+|++ ||..........................+.++.++|.+||+.||.+|||+.++++|+|+
T Consensus 183 ~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 183 WSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 999999999997 66554443333222211111111222345688999999999999999999999999996
No 201
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.5e-34 Score=323.31 Aligned_cols=250 Identities=31% Similarity=0.591 Sum_probs=206.7
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||+|+||.||++++..+|+.||+|.+............+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----------- 69 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE----------- 69 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-----------
Confidence 488999999999999999999999999999999865444445568899999999999999999998762
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
.....|+||||+. ++|.+.+.... .+++..++.++.|++.||.|||++
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08218 70 -----------------------------ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120 (256)
T ss_pred -----------------------------CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2357899999996 58999887543 588999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++|+||+|+|||++.++.++|+|||++........ ......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv 184 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE---------------LARTCIGTPYYLSPEICEN-RPYNNKSDI 184 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh---------------hhhhccCCccccCHHHhCC-CCCCCccch
Confidence 999999999999999999999999999976432110 0122468899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|||||++|+|++ ||............+. +..++.....+.++.++|.+||+.+|.+||++.++++|+||
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 185 WALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred hHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--CCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999997 6655544444444432 33333344556789999999999999999999999999996
No 202
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=9.2e-35 Score=327.73 Aligned_cols=247 Identities=18% Similarity=0.244 Sum_probs=196.8
Q ss_pred CCceEEeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
++|++.+.||+|+||.||+|.++ ..+..||+|.++.. .+......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 77 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG-CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR------ 77 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC-CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec------
Confidence 57899999999999999999875 34678999998743 333445678999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
...+|+||||++ ++|.+++... ..+++..++.++.||+.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~l 123 (266)
T cd05064 78 ----------------------------------GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL 123 (266)
T ss_pred ----------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 346799999997 5888888764 5689999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|++|++||||||+|||++.++.+|++|||.+....... ........+++.|+|||.+.+ ..++.+
T Consensus 124 H~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (266)
T cd05064 124 SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA--------------IYTTMSGKSPVLWAAPEAIQY-HHFSSA 188 (266)
T ss_pred HHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc--------------hhcccCCCCceeecCHHHHhh-CCccch
Confidence 99999999999999999999999999999876432110 001122346788999999887 678999
Q ss_pred hhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 659 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 659 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
+|||||||++||+++ ||.......... .+. ....++.....+..+.+++.+||+.+|.+||++.+|++
T Consensus 189 ~Di~slG~~l~ell~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 189 SDVWSFGIVMWEVMSYGERPYWDMSGQDVIK-AVE-DGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHH-HHH-CCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 999999999999774 776554443322 222 22233344556678999999999999999999999976
No 203
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=337.82 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=209.3
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 509 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g 509 (1239)
++||+|.||+||-|+++.+|+.||||+|.+-.-......++.+|+.+|.++.||.||.+-..| +
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-E--------------- 633 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-E--------------- 633 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-c---------------
Confidence 689999999999999999999999999976554445567899999999999999999987554 2
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 510 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE--SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 510 ~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~--~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
....+|+|||-+.|+....+- +.+++++....+++.||+.||.|||.++|+|.|
T Consensus 634 ------------------------T~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCD 689 (888)
T KOG4236|consen 634 ------------------------TPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCD 689 (888)
T ss_pred ------------------------CCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeecc
Confidence 356789999999998666553 457899999999999999999999999999999
Q ss_pred CCcccEEEcCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 588 LTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 588 LKp~NILl~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
|||+|||+.+. ..+||||||+|+.+..... ..+.+|||+|+|||+|+. ..|+..-||||+
T Consensus 690 LKPENVLLas~~~FPQvKlCDFGfARiIgEksF----------------RrsVVGTPAYLaPEVLrn-kGyNrSLDMWSV 752 (888)
T KOG4236|consen 690 LKPENVLLASASPFPQVKLCDFGFARIIGEKSF----------------RRSVVGTPAYLAPEVLRN-KGYNRSLDMWSV 752 (888)
T ss_pred CCchheeeccCCCCCceeeccccceeecchhhh----------------hhhhcCCccccCHHHHhh-ccccccccceee
Confidence 99999999764 4699999999998764431 356799999999999998 579999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHhhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 665 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|||+|--++ ||....+....+ ......+| ..|..+++++.+||..+|+..-.+|.|.+..|.|+|++...
T Consensus 753 GVIiYVsLSGTFPFNEdEdIndQI--QNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 753 GVIIYVSLSGTFPFNEDEDINDQI--QNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred eEEEEEEecccccCCCccchhHHh--hccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 999998885 776544333322 22234444 47889999999999999999999999999999999999764
No 204
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.7e-35 Score=347.01 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=194.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCC-----cEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 496 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~ 496 (1239)
.++|++.+.||+|+||.||+|++..+| ..||||+++.... ......+.+|+.+++.+ +|||||+++++|..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 368999999999999999999975544 5799999975432 23456788999999999 89999999998743
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-------------------
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 556 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 556 (1239)
...+|+|||||+ |+|.+++...
T Consensus 114 --------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (374)
T cd05106 114 --------------------------------------GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSS 155 (374)
T ss_pred --------------------------------------CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccc
Confidence 345789999996 6888887532
Q ss_pred ---------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 000880 557 ---------------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIH 585 (1239)
Q Consensus 557 ---------------------------------------------------~~l~~~~~~~i~~qI~~gL~yLHs~gIiH 585 (1239)
..+++..+++++.||+.||+|||++||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiH 235 (374)
T cd05106 156 DYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIH 235 (374)
T ss_pred cccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 23678889999999999999999999999
Q ss_pred cCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHH
Q 000880 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 665 (1239)
Q Consensus 586 rDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 665 (1239)
|||||+|||++.++++||+|||+++....... ........+++.|||||++.+ ..++.++||||||
T Consensus 236 rDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG 301 (374)
T cd05106 236 RDVAARNVLLTDGRVAKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYG 301 (374)
T ss_pred ccCchheEEEeCCCeEEEeeceeeeeccCCcc-------------eeeccCCCCccceeCHHHhcC-CCCCccccHHHHH
Confidence 99999999999999999999999975422110 000112345678999999877 5699999999999
Q ss_pred HHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 666 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 666 viL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|++|||++ ||.............. ....+......++++.++|.+||+.||.+|||+.++++.
T Consensus 302 vil~ellt~G~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 302 ILLWEIFSLGKSPYPGILVNSKFYKMVK-RGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred HHHHHHHhCCCCCCccccccHHHHHHHH-cccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999984 7765544333333332 221222222346799999999999999999999999864
No 205
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2e-34 Score=329.16 Aligned_cols=253 Identities=25% Similarity=0.377 Sum_probs=197.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|.+++.||+|+||.||+|.+..+|+.||+|++...... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--------- 74 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHT--------- 74 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEec---------
Confidence 6899999999999999999999999999999998754322 223467789999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....|+||||++++|.+.+.. ...+++..+..++.||+.||+|||++|
T Consensus 75 -------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 123 (291)
T cd07870 75 -------------------------------KETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH 123 (291)
T ss_pred -------------------------------CCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356899999999888777654 356888899999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+|||++.++.+||+|||+++...... .......+++.|+|||++.+...++.++|||
T Consensus 124 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 188 (291)
T cd07870 124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS---------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIW 188 (291)
T ss_pred cccCCCChHHEEEcCCCcEEEeccccccccCCCC---------------CCCCCccccccccCCceeecCCCCCcHHHHH
Confidence 9999999999999999999999999987532111 0112346799999999987645578899999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHH-Hhhhh--------------cCC---------CCCc------cccCCHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVL-SDLKQ--------------KGE---------LPPS------WVAKFSEQESLL 709 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~-~~~~~--------------~~~---------~p~~------~~~~~~e~~~LI 709 (1239)
||||++|||++ ||.......... ..... ... .+.. .....+++.+++
T Consensus 189 slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 268 (291)
T cd07870 189 GAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLA 268 (291)
T ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHH
Confidence 99999999997 665443321111 11000 000 0000 011245788999
Q ss_pred HHccCCCCCCCCCHHHHHhccCC
Q 000880 710 RRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 710 ~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
.+||..||.+|||+.+++.||||
T Consensus 269 ~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 269 SQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred HHHhCcCcccCcCHHHHhcCCCC
Confidence 99999999999999999999997
No 206
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.6e-36 Score=347.72 Aligned_cols=256 Identities=29% Similarity=0.517 Sum_probs=215.4
Q ss_pred CCCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCC--CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeec
Q 000880 418 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 495 (1239)
Q Consensus 418 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~ 495 (1239)
+.+||+ +...+||+|+|-+||+|.+..+|..||.-.++..+ .+....++|..|+.+|+.|+|||||++|..|.+.
T Consensus 37 p~gRy~---k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~ 113 (632)
T KOG0584|consen 37 PTGRYL---KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT 113 (632)
T ss_pred CCCcee---ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence 355653 33467999999999999999999999987666554 3455568999999999999999999999999654
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 000880 496 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 574 (1239)
Q Consensus 496 ~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~g 574 (1239)
....+.+|+|++. |+|..++.+.++++...++.|++||++|
T Consensus 114 --------------------------------------~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkG 155 (632)
T KOG0584|consen 114 --------------------------------------DNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKG 155 (632)
T ss_pred --------------------------------------CCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 2367889999995 8999999999999999999999999999
Q ss_pred HHHHHhCC--ccccCCCcccEEEcCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 000880 575 LAHIHGQG--IIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 651 (1239)
Q Consensus 575 L~yLHs~g--IiHrDLKp~NILl~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 651 (1239)
|.|||++. |||||||-.||||+.+ |.|||+|+|+|+...... ..+.+|||.|||||.+..
T Consensus 156 L~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-----------------aksvIGTPEFMAPEmYEE 218 (632)
T KOG0584|consen 156 LVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-----------------AKSVIGTPEFMAPEMYEE 218 (632)
T ss_pred hhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc-----------------cceeccCccccChHHHhh
Confidence 99999985 9999999999999876 899999999999764221 245799999999999984
Q ss_pred CCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHH
Q 000880 652 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELL 727 (1239)
Q Consensus 652 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL 727 (1239)
.|+..+||||||.+|+||.| ||..-.+.....+.+. .+..|..+.. ..|++++||.+||.. .++|||+.++|
T Consensus 219 --~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~-SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL 294 (632)
T KOG0584|consen 219 --NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT-SGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELL 294 (632)
T ss_pred --hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH-cCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHh
Confidence 69999999999999999997 8877665555555444 4555554433 347999999999999 99999999999
Q ss_pred hccCCCCc
Q 000880 728 QDALPPQM 735 (1239)
Q Consensus 728 ~~~~~~~~ 735 (1239)
+|+||...
T Consensus 295 ~d~Ff~~d 302 (632)
T KOG0584|consen 295 KDPFFDED 302 (632)
T ss_pred hChhhccc
Confidence 99999865
No 207
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.2e-34 Score=322.30 Aligned_cols=252 Identities=35% Similarity=0.620 Sum_probs=207.1
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||.|+||.||+|.+..+|+.||+|.+............+.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR--------- 71 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---------
Confidence 58889999999999999999999999999999986655555667899999999999999999999876432
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....+|++|||++ ++|.+++.. ...+++..++.++.||+.||.|||
T Consensus 72 -----------------------------~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 72 -----------------------------SNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred -----------------------------CCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 2356799999996 589988865 356899999999999999999999
Q ss_pred -----hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 000880 580 -----GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 654 (1239)
Q Consensus 580 -----s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 654 (1239)
+.+++|+||||+||+++.++.+||+|||++....... .......|++.|+|||++.+ ..
T Consensus 123 ~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---------------~~~~~~~~~~~~~~pE~~~~-~~ 186 (265)
T cd08217 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS---------------SFAKTYVGTPYYMSPEQLNH-MS 186 (265)
T ss_pred cCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc---------------ccccccccCCCccChhhhcC-CC
Confidence 9999999999999999999999999999998653211 00123478999999999987 56
Q ss_pred CCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 655 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
++.++|+||||+++|+|++ ||.......... ... .+..+......++.+.+++.+||+.+|++||++.+|++|||
T Consensus 187 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 187 YDEKSDIWSLGCLIYELCALSPPFTARNQLQLAS-KIK-EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHH-HHh-cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 8899999999999999996 676554333222 222 33333333455678999999999999999999999999998
Q ss_pred C
Q 000880 732 P 732 (1239)
Q Consensus 732 ~ 732 (1239)
.
T Consensus 265 ~ 265 (265)
T cd08217 265 I 265 (265)
T ss_pred C
Confidence 4
No 208
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.7e-34 Score=328.55 Aligned_cols=257 Identities=24% Similarity=0.425 Sum_probs=200.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.++|++.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.+ +||||++++++|....
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~----- 88 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD----- 88 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc-----
Confidence 578999999999999999999999999999999876322 2235678899999999 6999999999875421
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
......+|++|||++ ++|.+++.. ...+++..++.++.||+.||.
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ 138 (286)
T cd06638 89 ------------------------------VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ 138 (286)
T ss_pred ------------------------------cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence 013457899999996 589887752 346889999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---- 652 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---- 652 (1239)
|||+++++||||||+||+++.++.+||+|||+++...... .......||+.|+|||++...
T Consensus 139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (286)
T cd06638 139 HLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---------------LRRNTSVGTPFWMAPEVIACEQQLD 203 (286)
T ss_pred HHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCC---------------CccccccCCCcccChhhhchhhhcc
Confidence 9999999999999999999999999999999987643211 011234699999999987531
Q ss_pred CCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 653 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 653 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
..++.++|||||||++|||++ ||..........................+..+.++|.+||+.||++|||+.++++|
T Consensus 204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 204 STYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 347889999999999999996 66655443333222111111111112235689999999999999999999999999
Q ss_pred cCC
Q 000880 730 ALP 732 (1239)
Q Consensus 730 ~~~ 732 (1239)
+|+
T Consensus 284 ~~~ 286 (286)
T cd06638 284 VFI 286 (286)
T ss_pred ccC
Confidence 986
No 209
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-34 Score=330.81 Aligned_cols=253 Identities=23% Similarity=0.402 Sum_probs=206.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|++.+.||.|+||.||+|.+..+|+.||+|.+..... .....+.+|+.+++.++||||+++++.+..
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------- 87 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLV--------- 87 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEec---------
Confidence 579999999999999999999999999999999875432 335678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|+||||++ ++|..++.. ..+++.++..++.|++.||+|||++|
T Consensus 88 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~ 135 (296)
T cd06655 88 -------------------------------GDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQ 135 (296)
T ss_pred -------------------------------CceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356899999996 588887764 46899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+|
T Consensus 136 i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 199 (296)
T cd06655 136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 199 (296)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccchhccccc---------------ccCCCcCCCccccCcchhcC-CCCCchhhHH
Confidence 9999999999999999999999999987643211 01123468999999999887 5688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
||||++|+|++ ||..........................++.+.++|++||..||.+|||+.++++|+|+...
T Consensus 200 slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 200 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 99999999997 77665544333322221111222334566789999999999999999999999999998754
No 210
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.6e-34 Score=328.15 Aligned_cols=252 Identities=25% Similarity=0.445 Sum_probs=200.9
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++++.||.|++|.||+|+++.+|..||||+++..... .....+.+|+.+++.++||||++++++|..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---------- 69 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHT---------- 69 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEee----------
Confidence 588999999999999999999999999999999754322 234567889999999999999999988743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||++++|.+++... ..+++..+..++.||+.||+|||++
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (284)
T cd07836 70 ------------------------------ENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN 119 (284)
T ss_pred ------------------------------CCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999999999888654 3589999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+||++++++.++|+|||++....... .......+|+.|+|||++.+...++.++||
T Consensus 120 ~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 184 (284)
T cd07836 120 RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV---------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDI 184 (284)
T ss_pred CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---------------cccccccccccccChHHhcCCCCCCcHHHH
Confidence 99999999999999999999999999997543211 011234678999999998775568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhh------------------cCCCCC--------ccccCCHHHHHHHHHc
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQ------------------KGELPP--------SWVAKFSEQESLLRRL 712 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~------------------~~~~p~--------~~~~~~~e~~~LI~~~ 712 (1239)
|||||++|+|++ ||......+........ ....|. ..+..++.+.++|.+|
T Consensus 185 ~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 264 (284)
T cd07836 185 WSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRL 264 (284)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHH
Confidence 999999999997 66544333222211110 000010 0123356788999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 000880 713 MSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~ 732 (1239)
|+.||.+||++.++++||||
T Consensus 265 l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 265 LQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcCCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
No 211
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9e-35 Score=330.20 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=201.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCC-----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
+++|++.+.||+|+||.||+|.+...+ ..||+|.++.. ........+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--- 79 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK--- 79 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC---
Confidence 468899999999999999999987555 68999988643 233445678999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----------------CCCC
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 560 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 560 (1239)
....|++|||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 122 (283)
T cd05048 80 -------------------------------------EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLD 122 (283)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCC
Confidence 245789999996 6999988754 4478
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 000880 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 640 (1239)
Q Consensus 561 ~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 640 (1239)
+..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++....... ........+|
T Consensus 123 ~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~-------------~~~~~~~~~~ 189 (283)
T cd05048 123 CSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADY-------------YRVQSKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccccc-------------ccccCCCccc
Confidence 889999999999999999999999999999999999999999999999975421110 0112334678
Q ss_pred ccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 000880 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 716 (1239)
Q Consensus 641 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~d 716 (1239)
+.|+|||.+.+ ..++.++|||||||++|||++ ||......+.... +. ....++.....++++.+|+++||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~~~~l~~~c~~~~ 266 (283)
T cd05048 190 VRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM-IR-SRQLLPCPEDCPARVYALMIECWNEI 266 (283)
T ss_pred ccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCcCCCcccCCHHHHHHHHHHccCC
Confidence 99999999877 568999999999999999986 7766554443332 22 33334444566789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000880 717 PSDRPSATELLQD 729 (1239)
Q Consensus 717 P~~RPta~eiL~~ 729 (1239)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05048 267 PARRPRFKDIHTR 279 (283)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999875
No 212
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.3e-34 Score=327.36 Aligned_cols=254 Identities=28% Similarity=0.460 Sum_probs=207.7
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||.|+||.||+|++..+++.||+|.+.... .......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--------- 70 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE---------
Confidence 46888899999999999999999999999999987543 23445678899999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|+|+||++ ++|.+++... .+++..++.++.||+.||.|||+++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~ 118 (274)
T cd06609 71 -------------------------------GSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG 118 (274)
T ss_pred -------------------------------CCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 357899999996 5899988765 7899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++||||+|+||+++.++.++|+|||+++...... .......|++.|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~sDv~ 182 (274)
T cd06609 119 KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM---------------SKRNTFVGTPFWMAPEVIKQ-SGYDEKADIW 182 (274)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccceeecccc---------------cccccccCCccccChhhhcc-CCCCchhhHH
Confidence 9999999999999999999999999998653221 01233578899999999987 4589999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 737 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 737 (1239)
||||++|+|++ ||.............. ...+..... .++.+.+++.+||..+|++|||+.++++|+|+.....
T Consensus 183 slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 183 SLGITAIELAKGEPPLSDLHPMRVLFLIPK--NNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred HHHHHHHHHHhCCCCcccCchHHHHHHhhh--cCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 99999999997 6655443333322222 111211112 5678999999999999999999999999999987654
No 213
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=312.56 Aligned_cols=257 Identities=27% Similarity=0.428 Sum_probs=209.3
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~ 501 (1239)
+++.+.+..||.|+.|+||+++++.+|..+|||.+.... ..+...+++..+.++...+ .|+||+.+|+|+..
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n------ 163 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN------ 163 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC------
Confidence 577888899999999999999999999999999998544 4456778888888877664 89999999999643
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
..++|.||.|..-+..++.. .+++++..+-++...++.||.||..
T Consensus 164 ----------------------------------~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe 209 (391)
T KOG0983|consen 164 ----------------------------------TDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE 209 (391)
T ss_pred ----------------------------------chHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH
Confidence 34578999998777777654 4569999999999999999999986
Q ss_pred -CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCc
Q 000880 581 -QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDE 657 (1239)
Q Consensus 581 -~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ 657 (1239)
+||||||+||+|||+|..|++||||||++-++.... .++...|.+.|||||.+.- .+.|+-
T Consensus 210 KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk----------------AhtrsAGC~~YMaPERidp~~~~kYDi 273 (391)
T KOG0983|consen 210 KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK----------------AHTRSAGCAAYMAPERIDPPDKPKYDI 273 (391)
T ss_pred hcceeecccCccceEEccCCCEEeecccccceeeccc----------------ccccccCCccccCccccCCCCCCccch
Confidence 579999999999999999999999999998764322 2355689999999999864 356999
Q ss_pred chhhHHHHHHHHHhhc---CCchhHH-HHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
++|||||||+|+||.| ||..... -+...+++...+...+.-.+.++.+++|+..||.+|+.+||...++|+|+|..
T Consensus 274 RaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 274 RADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred hhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence 9999999999999997 7766433 33333344333333333344678999999999999999999999999999876
Q ss_pred Cch
Q 000880 734 QME 736 (1239)
Q Consensus 734 ~~~ 736 (1239)
..+
T Consensus 354 ~ye 356 (391)
T KOG0983|consen 354 RYE 356 (391)
T ss_pred ecc
Confidence 554
No 214
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.8e-34 Score=327.16 Aligned_cols=251 Identities=25% Similarity=0.410 Sum_probs=196.3
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccCCCC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
|++++.||+|+||.||+|.+..+++.||+|+++....+.. .....+|+.+++++. ||||+++++++.+.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~--------- 70 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDR--------- 70 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecC---------
Confidence 6788999999999999999999999999999875433322 234567999999985 99999999887432
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....+++||||++++|.+.+... ..+++..++.++.||+.||+|||++|+
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 71 -----------------------------KTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred -----------------------------CCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 12467999999999988888753 568999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+||+++. +.+||+|||+++...... ..+...+|+.|+|||++.+...++.++||||
T Consensus 122 ~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 184 (282)
T cd07831 122 FHRDIKPENILIKD-DILKLADFGSCRGIYSKP----------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWA 184 (282)
T ss_pred eecccCHHHEEEcC-CCeEEEecccccccccCC----------------CcCCCCCCcccCChhHhhcCCCCCcchhHHH
Confidence 99999999999999 999999999997642111 1123468899999998765456789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhc------------------CCCCC--------ccccCCHHHHHHHHHccC
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQK------------------GELPP--------SWVAKFSEQESLLRRLMS 714 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~------------------~~~p~--------~~~~~~~e~~~LI~~~L~ 714 (1239)
|||++|||++ ||................ ...|. .....+.++.++|.+||+
T Consensus 185 lGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 264 (282)
T cd07831 185 VGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLA 264 (282)
T ss_pred HHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhc
Confidence 9999999996 665433322211111100 00111 112345788999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 000880 715 PSPSDRPSATELLQDALP 732 (1239)
Q Consensus 715 ~dP~~RPta~eiL~~~~~ 732 (1239)
++|.+|||+.++++||||
T Consensus 265 ~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 265 YDPDERITAKQALRHPYF 282 (282)
T ss_pred cCcccccCHHHHhhCCCC
Confidence 999999999999999997
No 215
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.7e-34 Score=320.71 Aligned_cols=249 Identities=31% Similarity=0.557 Sum_probs=204.9
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|+..+.||+|+||.||+|.+..+++.+|||.+............+.+|+.+|+.++||||+++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE---------- 70 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec----------
Confidence 5889999999999999999999999999999998665555566789999999999999999999977632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+++||||++ ++|.+++... ..+++..++.++.|++.||+|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 71 ------------------------------DKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999996 5999999764 3489999999999999999999999
Q ss_pred CccccCCCcccEEEcCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 582 GIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
|++||||||+||+++.++ .+||+|||++....... ......|++.|+|||.+.+ ..++.++|
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS----------------KAYTVVGTPCYISPELCEG-KPYNQKSD 183 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc----------------cccccccCCcccCchhccC-CCCCcccc
Confidence 999999999999998654 58999999998653211 0123468999999999987 56889999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|||||+++|+|++ ||.............. ...++.....++++.+++.+||+.||.+|||+.++++|||+
T Consensus 184 v~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 184 IWALGCVLYELASLKRAFEAANLPALVLKIMS--GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred hHHHHHHHHHHHhCCCCcccCchHHHHHHHHh--cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9999999999997 7765544444433332 22222233456789999999999999999999999999985
No 216
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-34 Score=338.96 Aligned_cols=262 Identities=25% Similarity=0.349 Sum_probs=206.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|.+.+.||+|+||+||+|++..+|+.||||.+............+.+|+.+++.++||||+++++++....
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~------- 77 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPH------- 77 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccc-------
Confidence 5799999999999999999999999999999998754333344556789999999999999999998764321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
......+|++|||++++|.+++.....+++..++.++.||+.||.|||++++
T Consensus 78 ----------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 129 (337)
T cd07858 78 ----------------------------REAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANV 129 (337)
T ss_pred ----------------------------ccccCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 0112457999999999999999888889999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+|||++.++.+||+|||+++...... .......+|..|+|||++.+...++.++||||
T Consensus 130 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws 194 (337)
T cd07858 130 LHRDLKPSNLLLNANCDLKICDFGLARTTSEKG---------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWS 194 (337)
T ss_pred ecCCCCHHHEEEcCCCCEEECcCccccccCCCc---------------ccccccccccCccChHHHhcCCCCCCcccHHH
Confidence 999999999999999999999999997643211 01133568899999998875445899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHh-----------------------hhhcCC-----CCCccccCCHHHHHHHHHc
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSD-----------------------LKQKGE-----LPPSWVAKFSEQESLLRRL 712 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~-----------------------~~~~~~-----~p~~~~~~~~e~~~LI~~~ 712 (1239)
|||++|+|++ ||............ +..... ........++++.++|++|
T Consensus 195 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 274 (337)
T cd07858 195 VGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKM 274 (337)
T ss_pred HHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHH
Confidence 9999999996 56432211100000 000000 0111234567889999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 000880 713 MSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
|+.||.+|||+.++++|+|+...
T Consensus 275 l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 275 LVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hcCChhhccCHHHHHcCcchhhh
Confidence 99999999999999999998754
No 217
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-36 Score=319.02 Aligned_cols=255 Identities=27% Similarity=0.401 Sum_probs=207.5
Q ss_pred ccCCceEE-eeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccc
Q 000880 422 YLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 422 ~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~ 499 (1239)
..+||.+- ++||-|-.|+|..|.++.||+.+|+|++.- ..+..+||++.-.. .|||||.++++|-..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeNs---- 127 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYENS---- 127 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhhh----
Confidence 45777764 579999999999999999999999998852 34567888876555 799999999887221
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~~~~~~~i~~qI~~gL~ 576 (1239)
.....++.||||.+. |.|...++.++. |++.++..|+.||..|+.
T Consensus 128 --------------------------------~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~ 175 (400)
T KOG0604|consen 128 --------------------------------YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVR 175 (400)
T ss_pred --------------------------------ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHH
Confidence 123578999999995 689999987765 999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 653 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 653 (1239)
|||+.+|.||||||+|+|... +..+||+|||+|+....+ ....+.|.||.|.|||++.. .
T Consensus 176 ~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~----------------~~L~TPc~TPyYvaPevlg~-e 238 (400)
T KOG0604|consen 176 YLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP----------------GDLMTPCFTPYYVAPEVLGP-E 238 (400)
T ss_pred HHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC----------------ccccCCcccccccCHHHhCc-h
Confidence 999999999999999999975 456999999999864211 12356789999999999977 6
Q ss_pred CCCcchhhHHHHHHHHHhhc---CCchhHH----HHHHHHhhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 000880 654 KIDEKADMYSLGIVFFELWH---PFSTAME----RQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATE 725 (1239)
Q Consensus 654 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~----~~~~~~~~~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 725 (1239)
.|+..+|+||+||++|-|++ ||+.... .....++......+| +.|...+..++++|+.+|..+|.+|.|+.+
T Consensus 239 KydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~ 318 (400)
T KOG0604|consen 239 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEE 318 (400)
T ss_pred hcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHH
Confidence 79999999999999999997 5653322 112223334445566 478888889999999999999999999999
Q ss_pred HHhccCCCCch
Q 000880 726 LLQDALPPQME 736 (1239)
Q Consensus 726 iL~~~~~~~~~ 736 (1239)
++.|||..+..
T Consensus 319 ~m~hpwi~~~~ 329 (400)
T KOG0604|consen 319 VMDHPWINQYE 329 (400)
T ss_pred hhcCchhcccc
Confidence 99999987664
No 218
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.3e-34 Score=326.89 Aligned_cols=256 Identities=21% Similarity=0.390 Sum_probs=202.1
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+.|++.+.||.|+||.||+|+++.+++.||+|++.... .....+..|+.+++.+ +||||++++++|....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~------ 86 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS------ 86 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc------
Confidence 57888999999999999999999999999999986432 2345688899999998 7999999999875421
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
.......+|++||||+ ++|.+++... ..+++..++.++.||+.||.|||
T Consensus 87 ----------------------------~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 87 ----------------------------PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred ----------------------------ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0113467899999997 5899888653 35889999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCC
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKI 655 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~ 655 (1239)
++||+||||||+||+++.++.++|+|||++....... .......|++.|+|||++.. ...+
T Consensus 139 ~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~ 203 (282)
T cd06636 139 AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 203 (282)
T ss_pred HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc---------------cCCCcccccccccCHhhcCcccCcCcCC
Confidence 9999999999999999999999999999987542111 01133578999999998753 2457
Q ss_pred CcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 656 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+.++|+|||||++|||++ ||.............. ...........++++.+||.+||+.||.+|||+.+|++|||+
T Consensus 204 ~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 204 DYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh-CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 889999999999999997 7755443333222211 111112223456789999999999999999999999999996
No 219
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-35 Score=356.74 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=205.3
Q ss_pred cCCceEEeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
..+.+..+.||+|+||+||+|+... +...||||.++. ..+.....+|.||+.+|+.|+|||||+++|+|.+
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd-~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~--- 560 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKD-KAENQARQDFRREAELLAELQHPNIVRLLGVCRE--- 560 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcc-cccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc---
Confidence 3566778999999999999998752 346799998873 3344467889999999999999999999999943
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--------------CCCHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------------HFDKE 562 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------------~l~~~ 562 (1239)
...+++|+|||. |+|.++|.... +++..
T Consensus 561 -------------------------------------~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~ 603 (774)
T KOG1026|consen 561 -------------------------------------GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTS 603 (774)
T ss_pred -------------------------------------CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHH
Confidence 456899999995 89999996431 27889
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 000880 563 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 642 (1239)
Q Consensus 563 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 642 (1239)
+.+.|+.|||.||.||-++.+|||||..+|+||.++..|||+|||+++.....+..+. .....-..+
T Consensus 604 q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~-------------~~~t~lPIR 670 (774)
T KOG1026|consen 604 QFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKV-------------RGNTLLPIR 670 (774)
T ss_pred HHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcc-------------cCCceeeee
Confidence 9999999999999999999999999999999999999999999999996543332110 011234578
Q ss_pred CCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 000880 643 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 718 (1239)
Q Consensus 643 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 718 (1239)
|||||.+.. ++|+.+||||||||+|||+++ |+.+..+.++...+. .+...+-...+++++.+||..||+.+|.
T Consensus 671 WMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~--~g~lL~~Pe~CP~~vY~LM~~CW~~~P~ 747 (774)
T KOG1026|consen 671 WMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR--AGQLLSCPENCPTEVYSLMLECWNENPK 747 (774)
T ss_pred cCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH--cCCcccCCCCCCHHHHHHHHHHhhcCcc
Confidence 999999886 689999999999999999996 999988877765543 3444555567888999999999999999
Q ss_pred CCCCHHHHHh
Q 000880 719 DRPSATELLQ 728 (1239)
Q Consensus 719 ~RPta~eiL~ 728 (1239)
+||++.+|-.
T Consensus 748 ~RPsF~eI~~ 757 (774)
T KOG1026|consen 748 RRPSFKEIHS 757 (774)
T ss_pred cCCCHHHHHH
Confidence 9999999843
No 220
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=341.44 Aligned_cols=262 Identities=27% Similarity=0.436 Sum_probs=224.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
+.+++.+..||.||||.|-++..+.....+|+|++++... .....+.+..|-.+|..++.|.||++|..|
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf--------- 489 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF--------- 489 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh---------
Confidence 4678888999999999999999885555699999987663 445567899999999999999999999776
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
.+..++|+.||-| +|.|+..++.++.|++..+++++..+++|++|||+
T Consensus 490 -------------------------------rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~ 538 (732)
T KOG0614|consen 490 -------------------------------RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHR 538 (732)
T ss_pred -------------------------------ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHh
Confidence 3467899999999 78999999999999999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+|||+|||||+|+|++.+|.+||.|||+|+.+.... .+-++||||.|.|||++.+ ...+.++|
T Consensus 539 k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~----------------KTwTFcGTpEYVAPEIILn-KGHD~avD 601 (732)
T KOG0614|consen 539 KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR----------------KTWTFCGTPEYVAPEIILN-KGHDRAVD 601 (732)
T ss_pred cCceeccCChhheeeccCCceEEeehhhHHHhccCC----------------ceeeecCCcccccchhhhc-cCcchhhH
Confidence 999999999999999999999999999999875432 2356899999999999988 45899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCC
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALP 732 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~ 732 (1239)
.|||||++|||++ ||...+++.....++..-..+ ..+..+...+.+||+++...+|.+|.. +.+|-.|-||
T Consensus 602 yWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i-~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf 680 (732)
T KOG0614|consen 602 YWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI-EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWF 680 (732)
T ss_pred HHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhh
Confidence 9999999999996 999888888776666532221 112344558899999999999999985 8999999999
Q ss_pred CCchHHHHHH
Q 000880 733 PQMEYELLDN 742 (1239)
Q Consensus 733 ~~~~~~~~~~ 742 (1239)
.++.|+-+..
T Consensus 681 ~gfdweglr~ 690 (732)
T KOG0614|consen 681 EGFDWEGLRS 690 (732)
T ss_pred hcCChhhhhh
Confidence 9999876543
No 221
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-34 Score=329.87 Aligned_cols=255 Identities=23% Similarity=0.415 Sum_probs=203.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++++.||+|+||.||+|++..+|+.||+|.++... .......+.+|+.++++++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFI--------- 70 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheec---------
Confidence 47889999999999999999999999999999987532 33345678999999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~---~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...+|+|||||++ +|..++... ..+++..+..++.||+.||.|||
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 119 (286)
T cd06622 71 -------------------------------EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK 119 (286)
T ss_pred -------------------------------CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999975 888887753 36999999999999999999999
Q ss_pred h-CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-----
Q 000880 580 G-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----- 653 (1239)
Q Consensus 580 s-~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----- 653 (1239)
+ .+|+||||||+||+++.++.+||+|||++..+... ......|++.|+|||++.+..
T Consensus 120 ~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 182 (286)
T cd06622 120 EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-----------------LAKTNIGCQSYMAPERIKSGGPNQNP 182 (286)
T ss_pred hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-----------------ccccCCCccCccCcchhcCCCCCccC
Confidence 7 59999999999999999999999999998754211 012346888999999986522
Q ss_pred CCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhh-hhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 654 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDL-KQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 654 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~-~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
.++.++|||||||++|+|++ ||............. ......+......++++.++|.+||..+|.+||++.++++|
T Consensus 183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 183 TYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 35889999999999999997 775433322211111 11222233333466789999999999999999999999999
Q ss_pred cCCCCch
Q 000880 730 ALPPQME 736 (1239)
Q Consensus 730 ~~~~~~~ 736 (1239)
+|+....
T Consensus 263 ~~~~~~~ 269 (286)
T cd06622 263 PWLVKYK 269 (286)
T ss_pred hhhhhcc
Confidence 9986553
No 222
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.1e-34 Score=325.87 Aligned_cols=253 Identities=29% Similarity=0.448 Sum_probs=206.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|+..+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYN--------- 70 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeec---------
Confidence 468888999999999999999999999999999875433 2455678999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG- 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs- 580 (1239)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (265)
T cd06605 71 -------------------------------NGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119 (265)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 357899999998 6999999876 779999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
.|++|+||||+||+++.++.++|+|||.+....... .....|+..|+|||.+.+ ..++.++|
T Consensus 120 ~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~-----------------~~~~~~~~~y~~PE~~~~-~~~~~~~D 181 (265)
T cd06605 120 HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL-----------------AKTFVGTSSYMAPERIQG-NDYSVKSD 181 (265)
T ss_pred CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH-----------------hhcccCChhccCHHHHcC-CCCCchhh
Confidence 999999999999999999999999999987653211 011578899999999988 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhH----HHHHHHHhhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 661 MYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~----~~~~~~~~~~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|||||+++|+|++ ||.... .......... ....+..... .++++.++|.+||..||.+|||+.+++.||||
T Consensus 182 v~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 182 IWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred HHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 9999999999997 665431 1111111111 1112222122 56789999999999999999999999999999
Q ss_pred CCch
Q 000880 733 PQME 736 (1239)
Q Consensus 733 ~~~~ 736 (1239)
++.+
T Consensus 261 ~~~~ 264 (265)
T cd06605 261 KKYE 264 (265)
T ss_pred hccc
Confidence 7653
No 223
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.2e-34 Score=324.32 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=204.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||.|+||.||+|.++.+++.||+|++..... ....+.+|+.+++++ +||||++++++|.....
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP----- 77 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC-----
Confidence 689999999999999999999998999999999875432 346789999999999 79999999999865320
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
......+|++|||++ ++|.+++.. ...+++..++.++.|++.||.|
T Consensus 78 -----------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~ 128 (275)
T cd06608 78 -----------------------------PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY 128 (275)
T ss_pred -----------------------------CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 013467899999997 488888764 3579999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----C
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----P 653 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~ 653 (1239)
||+++++|+||+|+||+++.++.+||+|||++....... .......|++.|+|||++... .
T Consensus 129 lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 193 (275)
T cd06608 129 LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL---------------GRRNTFIGTPYWMAPEVIACDEQPDA 193 (275)
T ss_pred HhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch---------------hhhcCccccccccCHhHhcccccccC
Confidence 999999999999999999999999999999987542211 011335689999999987542 3
Q ss_pred CCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 000880 654 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 730 (1239)
Q Consensus 654 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 730 (1239)
.++.++|||||||+||+|++ ||..........................+.++.+||.+||..||.+|||+.++++||
T Consensus 194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~ 273 (275)
T cd06608 194 SYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP 273 (275)
T ss_pred CccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence 47889999999999999997 776554444433333221111111122456889999999999999999999999999
Q ss_pred CC
Q 000880 731 LP 732 (1239)
Q Consensus 731 ~~ 732 (1239)
|+
T Consensus 274 ~~ 275 (275)
T cd06608 274 FI 275 (275)
T ss_pred CC
Confidence 85
No 224
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.7e-34 Score=328.40 Aligned_cols=255 Identities=29% Similarity=0.453 Sum_probs=202.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||.|+||.||+|.++.+++.||||+++...........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 71 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--------- 71 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE---------
Confidence 46899999999999999999999999999999987655444455788999999999999999999988733
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~-~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|++|||+++++.+ +......+++..++.++.||+.||.|||+++
T Consensus 72 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 72 -------------------------------KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred -------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 35689999999876554 4445566999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++||||+|+||+++.++.+||+|||++........ .......+++.|+|||++.+...++.++|||
T Consensus 121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~ 186 (288)
T cd07833 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPA--------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVW 186 (288)
T ss_pred eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--------------ccccCcccccCCcCCchhcCCCCcCchhhHH
Confidence 99999999999999999999999999986532210 0113357889999999998844789999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcC-------------------CCCC---------ccc-cCCHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP---------SWV-AKFSEQESLLR 710 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~-------------------~~p~---------~~~-~~~~e~~~LI~ 710 (1239)
|||+++|+|++ ||................+ ..++ ... ..++++.+||+
T Consensus 187 slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 266 (288)
T cd07833 187 AIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLK 266 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHH
Confidence 99999999997 5544333222211110000 0000 001 12567899999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 000880 711 RLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+||..+|++|||+.++++|+||
T Consensus 267 ~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 267 ACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred HHhccCchhcccHHHHhcCCCC
Confidence 9999999999999999999997
No 225
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.6e-34 Score=334.52 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=197.3
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcE----EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
..+|++.+.||+|+||.||+|++..+|.. ||||+++.. .......++.+|+.+++.++||||++++++|..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~---- 80 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT---- 80 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC----
Confidence 36899999999999999999998766664 899988632 333455678999999999999999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~ 576 (1239)
...+++++|++ |+|.+++... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (316)
T cd05108 81 -------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 123 (316)
T ss_pred -------------------------------------CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 13478999996 6899988764 45889999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||++||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++
T Consensus 124 ~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~apE~~~~-~~~~ 189 (316)
T cd05108 124 YLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK-------------EYHAEGGKVPIKWMALESILH-RIYT 189 (316)
T ss_pred HHHhcCeeccccchhheEecCCCcEEEccccccccccCCCc-------------ceeccCCccceeecChHHhcc-CCCC
Confidence 99999999999999999999999999999999986532210 011122345778999999987 5689
Q ss_pred cchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 657 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
.++|||||||++|||++ ||......+. ..... ....++.......++.+++.+||..||.+||++.+++.+
T Consensus 190 ~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 190 HQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred chhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHh-CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999874 6654433332 22222 333333344556789999999999999999999999975
No 226
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.6e-34 Score=325.41 Aligned_cols=258 Identities=26% Similarity=0.411 Sum_probs=202.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.++|.+.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.+++++ +||||++++++|.....
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~---- 93 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK---- 93 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc----
Confidence 578999999999999999999999999999999986432 2345678899999999 89999999998854210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
.....+|+||||++ ++|.+++.. ...+++..++.++.|++.||+
T Consensus 94 -------------------------------~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~ 142 (291)
T cd06639 94 -------------------------------LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ 142 (291)
T ss_pred -------------------------------cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 12356899999996 589888753 356899999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC---
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--- 653 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--- 653 (1239)
|||++|++||||||+||+++.++.+||+|||++........ ......|++.|+|||++....
T Consensus 143 ~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---------------~~~~~~~~~~y~aPE~~~~~~~~~ 207 (291)
T cd06639 143 HLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---------------RRNTSVGTPFWMAPEVIACEQQYD 207 (291)
T ss_pred HHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccc---------------cccCccCCccccChhhhcCCCCcc
Confidence 99999999999999999999999999999999886432110 112346899999999986422
Q ss_pred -CCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 654 -KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 654 -~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
.++.++|||||||++|||++ ||.............................+.++|.+||+.+|++||++.++++|
T Consensus 208 ~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 208 YSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 36889999999999999997 66654443333332221111111122345678999999999999999999999999
Q ss_pred cCCC
Q 000880 730 ALPP 733 (1239)
Q Consensus 730 ~~~~ 733 (1239)
|||.
T Consensus 288 ~~~~ 291 (291)
T cd06639 288 PFIK 291 (291)
T ss_pred cccC
Confidence 9984
No 227
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=343.53 Aligned_cols=249 Identities=22% Similarity=0.355 Sum_probs=204.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCc---E-EEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGR---H-YAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~-vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
++-.+.++||+|+||+||+|+.+..+. . ||||..+... .......+|.+|.++|++++|||||++||++..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~---- 232 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL---- 232 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC----
Confidence 455566899999999999999886533 3 8999887533 556677889999999999999999999998743
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~ 576 (1239)
...+|||||+|. |+|.++|.+.+ .++..+...++.+.+.||+
T Consensus 233 ------------------------------------~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~ 276 (474)
T KOG0194|consen 233 ------------------------------------EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLE 276 (474)
T ss_pred ------------------------------------CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHH
Confidence 456799999996 69999999877 4999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||++++|||||-.+|+|++.++.+||+|||+++.-..-. .......-...|+|||.++. ..|+
T Consensus 277 YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~---------------~~~~~~klPirWLAPEtl~~-~~~s 340 (474)
T KOG0194|consen 277 YLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV---------------MKKFLKKLPIRWLAPETLNT-GIFS 340 (474)
T ss_pred HHHHCCCcchhHhHHHheecCCCeEEeCccccccCCccee---------------eccccccCcceecChhhhcc-Cccc
Confidence 9999999999999999999999999999999987532100 00011134568999999998 5899
Q ss_pred cchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 657 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+++|||||||++||+++ ||.+....+....+.......+. ....+.++..++.+||..||++|||+.++.+.
T Consensus 341 ~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~-~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 341 FKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI-PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKK 416 (474)
T ss_pred cccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC-CCCCHHHHHHHHHHhccCChhhccCHHHHHHH
Confidence 99999999999999985 88888877776666553333332 23556688999999999999999999999763
No 228
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.1e-34 Score=319.34 Aligned_cols=257 Identities=33% Similarity=0.489 Sum_probs=206.7
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|.+.+.||+|+||.||+|.+..+++.||+|.++...........+.+|+.+++.++||||+++++.+.
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~----------- 69 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV----------- 69 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----------
Confidence 478889999999999999999989999999999876555456778999999999999999999998752
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....+++++||++ ++|.+++.....+++..++.++.||+.||.|||++|+
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 120 (264)
T cd06626 70 -----------------------------HREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI 120 (264)
T ss_pred -----------------------------cCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCc
Confidence 2356899999996 5999999887779999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--CCCcchhh
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADM 661 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~ksDI 661 (1239)
+|+||||+||+++.++.+||+|||++.......... ........+++.|+|||++.+.. .++.++||
T Consensus 121 ~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv 189 (264)
T cd06626 121 VHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-----------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI 189 (264)
T ss_pred ccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-----------cccccCCcCCcCccChhhccCCCCCCCCcccch
Confidence 999999999999999999999999998754322110 00012346889999999988632 27899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHH-HhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVL-SDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~-~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
||||+++|+|++ ||.......... ..........+.+...++.+.++|.+||+.+|.+|||+.+++.|+|+
T Consensus 190 ~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 190 WSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 999999999996 776543222222 22211111122333446789999999999999999999999999985
No 229
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=316.69 Aligned_cols=270 Identities=26% Similarity=0.436 Sum_probs=216.9
Q ss_pred CCcccCCceE-EeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecC
Q 000880 419 SSRYLNDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 496 (1239)
Q Consensus 419 ~~~~~~~y~~-~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~ 496 (1239)
+++|.+-|++ .+.||+|+|+.|--|....+|..||||+|.+.. .....++.||++++..+ .|+||+++++.|
T Consensus 72 ~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefF---- 145 (463)
T KOG0607|consen 72 SGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFF---- 145 (463)
T ss_pred cchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHh----
Confidence 4445455554 357999999999999999999999999997542 23456899999999999 599999999877
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL 575 (1239)
.+...+|+|||-| +|.|..+++++..|++.+|.++.++|+.||
T Consensus 146 ------------------------------------Edd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aL 189 (463)
T KOG0607|consen 146 ------------------------------------EDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASAL 189 (463)
T ss_pred ------------------------------------cccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHH
Confidence 3467899999999 569999999999999999999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc--
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ-- 650 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-- 650 (1239)
.|||.+||.||||||+|||-....+ ||||||.+..-.....-... .......+.+|+..|||||+..
T Consensus 190 dFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp--------astP~L~tPvGSAEfMAPEVVd~f 261 (463)
T KOG0607|consen 190 DFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP--------ASTPELLTPVGSAEFMAPEVVDVF 261 (463)
T ss_pred HHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCC--------CCCccccCcccchhhcchhHHhhh
Confidence 9999999999999999999977654 89999999875432211111 1122345679999999999753
Q ss_pred -C-CCCCCcchhhHHHHHHHHHhhc---CCchhHH---------------HHHHHHhhhhcCCCCC-ccccCCHHHHHHH
Q 000880 651 -G-WPKIDEKADMYSLGIVFFELWH---PFSTAME---------------RQIVLSDLKQKGELPP-SWVAKFSEQESLL 709 (1239)
Q Consensus 651 -~-~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~---------------~~~~~~~~~~~~~~p~-~~~~~~~e~~~LI 709 (1239)
+ ...|+.++|.||||||||-|++ ||.+.-. ...+-.+...+..+|. .|..++.++++||
T Consensus 262 v~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdli 341 (463)
T KOG0607|consen 262 VDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLI 341 (463)
T ss_pred ccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHH
Confidence 2 2459999999999999999996 6643211 1223344445566775 7889999999999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCchHH
Q 000880 710 RRLMSPSPSDRPSATELLQDALPPQMEYE 738 (1239)
Q Consensus 710 ~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 738 (1239)
+.+|..|+.+|.++.++++|||++....+
T Consensus 342 snLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 342 SNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHhccHHhhhhhhhccCCccccccchh
Confidence 99999999999999999999999887543
No 230
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.2e-34 Score=330.32 Aligned_cols=255 Identities=23% Similarity=0.391 Sum_probs=205.0
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..+|++++.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+.+++.++||||++++++|..
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 87 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV-------- 87 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEec--------
Confidence 3689999999999999999999999999999999875433 234668899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||++ ++|.+++.. ..+++..+..++.|++.||.|||+.
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~ 134 (297)
T cd06656 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSN 134 (297)
T ss_pred --------------------------------CCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999996 588888754 4588999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+|||++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+
T Consensus 135 ~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 198 (297)
T cd06656 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (297)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCccceEccCCc---------------cCcCcccCCccccCHHHHcC-CCCCcHHHH
Confidence 99999999999999999999999999987542111 01123468999999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|||||++|+|++ ||..........................++.+.+||.+||..||++||++.++++|+|+....
T Consensus 199 ~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence 999999999997 776544332222221111111112234556789999999999999999999999999987553
No 231
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.7e-34 Score=328.99 Aligned_cols=256 Identities=26% Similarity=0.365 Sum_probs=201.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|...+.||+|+||.||++.+..+|+.||||.+...... .....+.+|+.++.++. ||||+++++++..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-------- 74 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-------- 74 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--------
Confidence 4677788999999999999999999999999998754333 44567889999999996 9999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....+++|||++.++.++.. ....+++..+..++.|++.||+|
T Consensus 75 --------------------------------~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 122 (288)
T cd06616 75 --------------------------------EGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNY 122 (288)
T ss_pred --------------------------------CCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 34568999999877665432 23569999999999999999999
Q ss_pred HHhC-CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CC
Q 000880 578 IHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PK 654 (1239)
Q Consensus 578 LHs~-gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~ 654 (1239)
||+. +++||||||+|||++.++.+||+|||++....... ......||+.|+|||++.+. ..
T Consensus 123 lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~ 186 (288)
T cd06616 123 LKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----------------AKTRDAGCRPYMAPERIDPSARDG 186 (288)
T ss_pred HhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC----------------ccccccCccCccCHHHhccccccC
Confidence 9974 99999999999999999999999999997643211 11234689999999999874 36
Q ss_pred CCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhh-c-CCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 655 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ-K-GELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~-~-~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
++.++|||||||++|||++ ||............... . ..++. .....++++.+||.+||+.||++|||++++++
T Consensus 187 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 187 YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 8999999999999999996 66544321111111111 1 11111 22345678999999999999999999999999
Q ss_pred ccCCCCch
Q 000880 729 DALPPQME 736 (1239)
Q Consensus 729 ~~~~~~~~ 736 (1239)
|+|+....
T Consensus 267 ~~~~~~~~ 274 (288)
T cd06616 267 HPFIKDYE 274 (288)
T ss_pred Chhhhchh
Confidence 99997654
No 232
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.3e-34 Score=321.56 Aligned_cols=249 Identities=25% Similarity=0.467 Sum_probs=199.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||+|+||.||+|+++.+++.||||.++... ........+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 73 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-------- 73 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE--------
Confidence 68999999999999999999999999999999887533 233445678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....|++|||++ ++|.+++.. ...+++..++.++.||+.||.|
T Consensus 74 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 121 (267)
T cd08228 74 --------------------------------DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEH 121 (267)
T ss_pred --------------------------------CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 346799999997 588887753 3448999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++|++||||||+||+++.++.++|+|||++........ ......|++.|+|||.+.+ ..++.
T Consensus 122 LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~---------------~~~~~~~~~~~~aPE~~~~-~~~~~ 185 (267)
T cd08228 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT---------------AAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH---------------HHhcCCCCccccChhhhcc-CCCCc
Confidence 9999999999999999999999999999999886532110 1123468899999999987 56889
Q ss_pred chhhHHHHHHHHHhhc---CCchhHH-HHHHHHhhhhcCCCCCc-cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 658 KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~~~~~~~~p~~-~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
++|+||||+++|||++ ||..... .......+. ....++. ....+..+.++|.+||+.+|++||++.++++.
T Consensus 186 ~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred hhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 9999999999999997 6654322 122222222 2223332 22455689999999999999999999999975
No 233
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.4e-34 Score=336.89 Aligned_cols=260 Identities=27% Similarity=0.415 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|.+.+.||+|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 88 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS----- 88 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc-----
Confidence 368999999999999999999999899999999987544333344568899999999999999999988743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
......+|++|||++.+|..++. ..+++..++.++.||+.||+|||++|
T Consensus 89 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ 137 (342)
T cd07879 89 -----------------------------GDEFQDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAG 137 (342)
T ss_pred -----------------------------CCCCceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 01234579999999888877653 46899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+...++.++|||
T Consensus 138 i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 199 (342)
T cd07879 138 IIHRDLKPGNLAVNEDCELKILDFGLARHADA------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIW 199 (342)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCCCCcCCCC------------------CCCCceeeecccChhhhcCccccCchHHHH
Confidence 99999999999999999999999999875311 113457899999999987645688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhc-----------------------CCCC-----CccccCCHHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQK-----------------------GELP-----PSWVAKFSEQESLLRR 711 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~-----------------------~~~p-----~~~~~~~~e~~~LI~~ 711 (1239)
||||++|||++ ||............+... ...+ ..++..++++.+||.+
T Consensus 200 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 279 (342)
T cd07879 200 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEK 279 (342)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHH
Confidence 99999999997 776543322221111100 0001 1122455678999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 000880 712 LMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||+.||.+||++.+++.|+||....
T Consensus 280 ~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 280 MLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HcCCChhhCcCHHHHhcCcchhhcc
Confidence 9999999999999999999997764
No 234
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.4e-34 Score=323.99 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=205.0
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
+|++.+.||.|+||.||+|++..+++.||+|++...... ......+.+|+.++++++||||+++++++.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ---------- 70 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc----------
Confidence 488999999999999999999999999999999754432 245678999999999999999999987762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....+|+||||+. ++|.+.+.....+++..+..++.||+.||.|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 71 ------------------------------DEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred ------------------------------CCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2457899999996 599999987778999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++|+||||+||+++.++.++|+|||++....... ......|+..|+|||++.+ ..++.++|+|
T Consensus 121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~ 183 (258)
T cd05578 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT----------------LTTSTSGTPGYMAPEVLCR-QGYSVAVDWW 183 (258)
T ss_pred eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------cccccCCChhhcCHHHHcc-cCCCCcccch
Confidence 9999999999999999999999999988643211 1123468889999999987 5589999999
Q ss_pred HHHHHHHHhhc---CCchhHH--HHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH--HHHHhccCC
Q 000880 663 SLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA--TELLQDALP 732 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~--~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta--~eiL~~~~~ 732 (1239)
|||+++|+|++ ||..... .......... ..+......++.+.++|.+||..||.+||++ .++++|+||
T Consensus 184 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 184 SLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred hhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 99999999996 6665442 2222222221 2222233455789999999999999999999 999999997
No 235
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.1e-34 Score=319.32 Aligned_cols=250 Identities=30% Similarity=0.454 Sum_probs=205.2
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
|+..+.||+|+||+||+|.+..+++.||+|.+..... ..+....+.+|+.+++.++||||+++++.+..
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 73 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-------- 73 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec--------
Confidence 5667899999999999999998999999999876442 23345678999999999999999999987632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|++|||++ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 121 (258)
T cd06632 74 --------------------------------EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR 121 (258)
T ss_pred --------------------------------CCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 59999998877899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++|+||+|+||+++.++.+||+|||++....... ......|++.|+|||.+.....++.++|+
T Consensus 122 ~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~----------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~ 185 (258)
T cd06632 122 NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS----------------FAKSFKGSPYWMAPEVIAQQGGYGLAADI 185 (258)
T ss_pred CcccCCCCHHHEEECCCCCEEEccCccceeccccc----------------cccccCCCcceeCHHHhcCCCCCCchhhh
Confidence 99999999999999999999999999987643211 11345689999999998763338999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|||||++|+|++ ||.............. ....+.......+++.+++++||+.+|.+||++.++++|||+
T Consensus 186 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 186 WSLGCTVLEMATGKPPWSQLEGVAAVFKIGR-SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHHHHHHHhCCCCcccCcHHHHHHHHHh-cccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999999997 7765554333333222 123333334556789999999999999999999999999985
No 236
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.7e-34 Score=335.97 Aligned_cols=265 Identities=28% Similarity=0.390 Sum_probs=210.4
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||.|+||.||+|++..+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------- 73 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP------- 73 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc-------
Confidence 4788999999999999999999889999999987554434456789999999999999999999988743210
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
.....+|++|+|++++|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 74 ----------------------------~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~ 125 (330)
T cd07834 74 ----------------------------EDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVI 125 (330)
T ss_pred ----------------------------ccccceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 1224679999999999999998877899999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
||||||.|||++.++.++|+|||++......... ........+|+.|+|||++.+...++.++|+|||
T Consensus 126 H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~sl 193 (330)
T cd07834 126 HRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSV 193 (330)
T ss_pred cCCCCHHHEEEcCCCCEEEcccCceEeecccccc------------cccccccccccCcCCceeeecccCCCcchhHHHH
Confidence 9999999999999999999999999865332100 0112345789999999999885478999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHhhhhcCCCC----------------------------CccccCCHHHHHHHHHcc
Q 000880 665 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLRRLM 713 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p----------------------------~~~~~~~~e~~~LI~~~L 713 (1239)
||++|+|++ ||......+.........+..+ ......++++.++|.+||
T Consensus 194 G~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 273 (330)
T cd07834 194 GCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKML 273 (330)
T ss_pred HHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHc
Confidence 999999997 6654433322221111111000 011234568899999999
Q ss_pred CCCCCCCCCHHHHHhccCCCCch
Q 000880 714 SPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
+.+|.+|||+.++++|+||.+..
T Consensus 274 ~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 274 VFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred cCChhhCCCHHHHHhCccHHhhc
Confidence 99999999999999999998764
No 237
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.2e-34 Score=336.34 Aligned_cols=261 Identities=26% Similarity=0.418 Sum_probs=204.7
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.++++++||||+++++++....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~------ 89 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR------ 89 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc------
Confidence 36899999999999999999999989999999998754433334567889999999999999999998774321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
........|+++++++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 90 ----------------------------~~~~~~~~~lv~~~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ 140 (345)
T cd07877 90 ----------------------------SLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD 140 (345)
T ss_pred ----------------------------cccccccEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 0012345789999999999888764 46999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+||+++.++.+||+|||+++..... .....||+.|+|||++.+...++.++|||
T Consensus 141 ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 202 (345)
T cd07877 141 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIW 202 (345)
T ss_pred eeecCCChHHEEEcCCCCEEEeccccccccccc------------------ccccccCCCccCHHHHhCccCCCchhhHH
Confidence 999999999999999999999999998753210 12346899999999987655688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhc-----------------------CCCC-----CccccCCHHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQK-----------------------GELP-----PSWVAKFSEQESLLRR 711 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~-----------------------~~~p-----~~~~~~~~e~~~LI~~ 711 (1239)
||||++|||++ ||................ ...+ ..+...++++.++|.+
T Consensus 203 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (345)
T cd07877 203 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 282 (345)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHH
Confidence 99999999996 664332222111111100 0011 1112346788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 000880 712 LMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||+.||.+||++.++++|+||.+..
T Consensus 283 ~L~~dp~~R~t~~e~l~h~~f~~~~ 307 (345)
T cd07877 283 MLVLDSDKRITAAQALAHAYFAQYH 307 (345)
T ss_pred HcCCChhhcCCHHHHhcChhhhhcC
Confidence 9999999999999999999998754
No 238
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.5e-34 Score=324.21 Aligned_cols=255 Identities=27% Similarity=0.439 Sum_probs=202.8
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCc
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++.+...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---------- 70 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---------- 70 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC----------
Confidence 6788999999999999999998999999999986543344456788999999999999999999887431
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
....+|+||||++++|..++... ..+++..++.++.||+.||+|||++|++
T Consensus 71 ----------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~ 122 (287)
T cd07840 71 ----------------------------GKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGIL 122 (287)
T ss_pred ----------------------------CCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 02578999999999999988765 5799999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
|+||||+|||++.++.+||+|||++........ ...+...++..|+|||.+.+...++.++|||||
T Consensus 123 h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~sl 188 (287)
T cd07840 123 HRDIKGSNILINNDGVLKLADFGLARPYTKRNS--------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSV 188 (287)
T ss_pred eccCcHHHeEEcCCCCEEEccccceeeccCCCc--------------ccccccccccccCCceeeEccccCChHHHHHHH
Confidence 999999999999999999999999986532210 012334678899999988764568899999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHhhhhcCCC-----------------------C----Ccccc-CCHHHHHHHHHcc
Q 000880 665 GIVFFELWH---PFSTAMERQIVLSDLKQKGEL-----------------------P----PSWVA-KFSEQESLLRRLM 713 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~-----------------------p----~~~~~-~~~e~~~LI~~~L 713 (1239)
|+++|||++ ||................... + ..... .++.+.++|++||
T Consensus 189 G~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 268 (287)
T cd07840 189 GCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLL 268 (287)
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHc
Confidence 999999997 665444322222111100000 0 00111 1567889999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 000880 714 SPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~~~~ 732 (1239)
+.+|.+||++.++++|+||
T Consensus 269 ~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 269 TLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCChhhCcCHHHHhhCcCC
Confidence 9999999999999999996
No 239
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.5e-34 Score=359.70 Aligned_cols=266 Identities=25% Similarity=0.389 Sum_probs=198.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
+++|++.++||+|+||.||+|++..+|+.||||+++.... ......++.+|+.+++.++||||+++++++.+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d------- 73 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD------- 73 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-------
Confidence 3689999999999999999999999999999999875332 23345679999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-----------CCCCHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------DHFDKELAWHLFR 569 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------~~l~~~~~~~i~~ 569 (1239)
....|++||||+ ++|.+++... ..++...++.++.
T Consensus 74 ---------------------------------~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~ 120 (932)
T PRK13184 74 ---------------------------------GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH 120 (932)
T ss_pred ---------------------------------CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHH
Confidence 356799999996 5899888642 2355677889999
Q ss_pred HHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccC-CCCCC--CCCCccccCcccccCccCCCc
Q 000880 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-AAFPT--DTGGVSVDGTGQVGTYFYTAP 646 (1239)
Q Consensus 570 qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~GT~~Y~AP 646 (1239)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......... ..... ............+||+.||||
T Consensus 121 QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAP 200 (932)
T PRK13184 121 KICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAP 200 (932)
T ss_pred HHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999987522110000 00000 000000011235799999999
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH
Q 000880 647 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 723 (1239)
Q Consensus 647 E~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta 723 (1239)
|++.+ ..++.++|||||||++|||++ ||................+.....+...++.+.+++.+||+.||++||+.
T Consensus 201 E~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss 279 (932)
T PRK13184 201 ERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSS 279 (932)
T ss_pred HHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCH
Confidence 99987 568999999999999999997 77654433332222111111112234566789999999999999999876
Q ss_pred HHHHhc
Q 000880 724 TELLQD 729 (1239)
Q Consensus 724 ~eiL~~ 729 (1239)
.+.+.+
T Consensus 280 ~eeLl~ 285 (932)
T PRK13184 280 VQELKQ 285 (932)
T ss_pred HHHHHH
Confidence 665543
No 240
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.3e-34 Score=336.20 Aligned_cols=266 Identities=26% Similarity=0.368 Sum_probs=208.2
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccc
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~ 499 (1239)
...++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++++ +||||++++++|...
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---- 79 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---- 79 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC----
Confidence 456789999999999999999999998999999998864433334455678899999999 999999999887321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....+|+||||++++|..++... .+++..++.++.||+.||+|||
T Consensus 80 ----------------------------------~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH 124 (337)
T cd07852 80 ----------------------------------NDKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIH 124 (337)
T ss_pred ----------------------------------CCceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 23568999999999999988765 7899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++||+||||||+|||++.++.+||+|||++.......... .........||+.|+|||++.+...++.++
T Consensus 125 ~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~----------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~s 194 (337)
T cd07852 125 SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP----------ENPVLTDYVATRWYRAPEILLGSTRYTKGV 194 (337)
T ss_pred HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc----------cCcchhcccccccccCceeeeccccccccc
Confidence 9999999999999999999999999999998653221100 001123457899999999887655688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc--------------------------C--CCCCccccCCHHHHHH
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--------------------------G--ELPPSWVAKFSEQESL 708 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~--------------------------~--~~p~~~~~~~~e~~~L 708 (1239)
|||||||++|+|++ ||................ . .........+.++.++
T Consensus 195 Di~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 274 (337)
T cd07852 195 DMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDL 274 (337)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHH
Confidence 99999999999997 664333222111110000 0 0111122346788999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 709 LRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 709 I~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
|.+||+.||.+|||+.++++|+|+.++
T Consensus 275 i~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 275 LKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHHhccCCcccccCHHHHhhChhhhhh
Confidence 999999999999999999999998875
No 241
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.6e-34 Score=321.32 Aligned_cols=257 Identities=23% Similarity=0.399 Sum_probs=202.4
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC----chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
+|+..+.||+|+||.||++.+..+++.||+|+++..... ......+.+|+.+++.++||||+++++.+.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 74 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE------ 74 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc------
Confidence 467778999999999999999999999999999754321 1234678999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...+++||||++ ++|.+++.....+++..++.++.||+.||.|||
T Consensus 75 ----------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH 120 (268)
T cd06630 75 ----------------------------------DSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH 120 (268)
T ss_pred ----------------------------------CCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 589999988888999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 580 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
++|++||||||+||+++.++ .+||+|||++.......... ........||..|+|||++.+ ..++.+
T Consensus 121 ~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~-~~~~~~ 188 (268)
T cd06630 121 ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------GEFQGQLLGTIAFMAPEVLRG-EQYGRS 188 (268)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------CccccccccccceeCHhHhcc-CCCCcc
Confidence 99999999999999998876 59999999998654221000 001123468999999999877 568999
Q ss_pred hhhHHHHHHHHHhhc---CCchhHHH--HHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 659 ADMYSLGIVFFELWH---PFSTAMER--QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 659 sDIwSlGviL~ELlt---Pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
+|+||+||++|+|++ ||...... .............+......++++.+++.+||..+|.+||++.++++||||.
T Consensus 189 ~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 189 CDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred cchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999999999996 66432211 1111111111222223334567899999999999999999999999999974
No 242
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6e-34 Score=318.36 Aligned_cols=247 Identities=30% Similarity=0.552 Sum_probs=201.4
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||.|+||.||++.++.+++.||+|.++.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 69 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA---------- 69 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE----------
Confidence 58899999999999999999999999999999875432 3345678899999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 70 ------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 119 (255)
T cd08219 70 ------------------------------DGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK 119 (255)
T ss_pred ------------------------------CCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 457899999996 5898887643 4589999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+|+||||+||+++.++.++|+|||++........ ......|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv 183 (255)
T cd08219 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA---------------YACTYVGTPYYVPPEIWEN-MPYNNKSDI 183 (255)
T ss_pred CcccCCCCcceEEECCCCcEEEcccCcceeeccccc---------------ccccccCCccccCHHHHcc-CCcCchhhh
Confidence 999999999999999999999999999875432110 1123578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 730 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 730 (1239)
||||+++|+|++ ||............. .+..++.....+..+.++|.+||+.||.+|||+.+++...
T Consensus 184 ~slG~i~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 184 WSLGCILYELCTLKHPFQANSWKNLILKVC--QGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred hhhchhheehhhccCCCCCCCHHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 999999999996 776554444333332 2233333334567899999999999999999999998753
No 243
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-35 Score=289.93 Aligned_cols=257 Identities=27% Similarity=0.511 Sum_probs=208.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|...++||+|.||+||+|+++.+++.||+|.++..+.+.......++|+-+|+.++|.|||++++...
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh---------- 71 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH---------- 71 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc----------
Confidence 3566778999999999999999999999999999988777667778999999999999999999997652
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....+-+|+|||..+|..++.+ ++.++.+.++.++.|+++||.|+|+++
T Consensus 72 ------------------------------sdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn 121 (292)
T KOG0662|consen 72 ------------------------------SDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN 121 (292)
T ss_pred ------------------------------cCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh
Confidence 2467889999999999998875 456999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
+.||||||.|.||+.+|.+||+|||+|+.+..+-. ..+..+-|.+|.+|.++-|..-|+...|||
T Consensus 122 vlhrdlkpqnllin~ngelkladfglarafgipvr---------------cysaevvtlwyrppdvlfgakly~tsidmw 186 (292)
T KOG0662|consen 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR---------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186 (292)
T ss_pred hhhccCCcceEEeccCCcEEecccchhhhcCCceE---------------eeeceeeeeeccCcceeeeeehhccchHhh
Confidence 99999999999999999999999999997653321 113346799999999999977799999999
Q ss_pred HHHHHHHHhhc---CCchhHH-HHHHHHhhhhcCCC--------------------C--CccccCCH----HHHHHHHHc
Q 000880 663 SLGIVFFELWH---PFSTAME-RQIVLSDLKQKGEL--------------------P--PSWVAKFS----EQESLLRRL 712 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~-~~~~~~~~~~~~~~--------------------p--~~~~~~~~----e~~~LI~~~ 712 (1239)
|.|||+.|+.. |..+..+ .....++...-+.. | ..|....| .-++|+.++
T Consensus 187 sagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkl 266 (292)
T KOG0662|consen 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKL 266 (292)
T ss_pred hcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHH
Confidence 99999999974 4433332 22223322211110 0 02222222 236999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 000880 713 MSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
|..+|.+|.+++..++||+|...
T Consensus 267 l~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 267 LKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred hccCcccccCHHHHhcCcccccc
Confidence 99999999999999999988654
No 244
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.7e-34 Score=320.80 Aligned_cols=243 Identities=22% Similarity=0.314 Sum_probs=194.5
Q ss_pred eeccCCceEEEEEEE--ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 431 PLGHGGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~--~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
+||+|+||.||+|.+ +.++..+|+|+++...........+.+|+.+++.++||||+++++.+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------------- 66 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--------------- 66 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc---------------
Confidence 589999999999975 456889999998755555555678999999999999999999998751
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
....+++|||++ ++|.+++.....+++..+..++.||+.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d 120 (257)
T cd05116 67 --------------------------AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRD 120 (257)
T ss_pred --------------------------CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 124589999997 58999998878899999999999999999999999999999
Q ss_pred CCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHH
Q 000880 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 667 (1239)
Q Consensus 588 LKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 667 (1239)
|||.|||++.++.+||+|||++......... ........+++.|+|||.+.+ ..++.++|||||||+
T Consensus 121 lkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~ 187 (257)
T cd05116 121 LAARNVLLVTQHYAKISDFGLSKALGADENY------------YKAKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVL 187 (257)
T ss_pred cchhhEEEcCCCeEEECCCccccccCCCCCe------------eeecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHH
Confidence 9999999999999999999999865322100 001122345689999999876 568899999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 668 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 668 L~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+|||++ ||........... +. ....++.....++++.++|.+||+.||.+||++.+|.+.
T Consensus 188 l~el~t~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 188 MWEAFSYGQKPYKGMKGNEVTQM-IE-SGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHH-HH-CCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 999985 7765544433322 22 223333344567899999999999999999999999753
No 245
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.2e-34 Score=326.37 Aligned_cols=252 Identities=26% Similarity=0.397 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++++.||+|+||+||++.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 74 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLN-------- 74 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEec--------
Confidence 368899999999999999999999999999999987543 33456789999999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG- 580 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs- 580 (1239)
...+|+||||++ ++|.+++...+.+++..++.++.|++.||.|||+
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 122 (284)
T cd06620 75 --------------------------------ENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV 122 (284)
T ss_pred --------------------------------CCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 357899999997 5899988887889999999999999999999997
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
++++||||||+||+++.++.++|+|||++....... ....+||..|+|||++.+ ..++.++|
T Consensus 123 ~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-----------------~~~~~~~~~~~aPE~~~~-~~~~~~~D 184 (284)
T cd06620 123 HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-----------------ADTFVGTSTYMSPERIQG-GKYTVKSD 184 (284)
T ss_pred cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-----------------cCccccCcccCCHHHHcc-CCCCccch
Confidence 689999999999999999999999999986532110 123478999999999877 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHH-----------HHHHHhhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 000880 661 MYSLGIVFFELWH---PFSTAMER-----------QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATE 725 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~-----------~~~~~~~~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~e 725 (1239)
+|||||++|+|++ ||...... ........ . ..+. .....++++.+||.+||+.||.+|||+.+
T Consensus 185 i~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e 262 (284)
T cd06620 185 VWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ-E-PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQ 262 (284)
T ss_pred HHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh-c-cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHH
Confidence 9999999999996 76543321 11111111 1 1111 11225568999999999999999999999
Q ss_pred HHhccCCCCc
Q 000880 726 LLQDALPPQM 735 (1239)
Q Consensus 726 iL~~~~~~~~ 735 (1239)
+++|+||.+.
T Consensus 263 ~~~~~~~~~~ 272 (284)
T cd06620 263 LCAMPPFIQA 272 (284)
T ss_pred HhcCcccccc
Confidence 9999988664
No 246
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-36 Score=314.11 Aligned_cols=272 Identities=24% Similarity=0.412 Sum_probs=212.1
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
..+.|+-+.+||+|.||+||+|+++.+|+.||+|++-..+.....-...++|+.+|..|+|+|++.++..|-...
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~----- 89 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA----- 89 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhcc-----
Confidence 345677788999999999999999999999999987654433334456889999999999999999998873211
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
+ ....+...+|+||.+|..+|..+|... .+++..++.+++.+++.||.|||+
T Consensus 90 ----------------T-----------p~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr 142 (376)
T KOG0669|consen 90 ----------------T-----------PTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR 142 (376)
T ss_pred ----------------C-----------CcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 0 001245678999999999999999866 679999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+.|+|||+||+|+||+.+|.+||+|||+|+.+......... ..+.++-|.+|.+||.+.|...|+++.|
T Consensus 143 ~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kp-----------rytnrvvTLwYrppEllLG~r~yg~~iD 211 (376)
T KOG0669|consen 143 NKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKP-----------RYTNRVVTLWYRPPELLLGDREYGPPID 211 (376)
T ss_pred hhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCC-----------CcccceeeeecCCHHHhhcccccCCcch
Confidence 99999999999999999999999999999876544322211 2356788999999999999889999999
Q ss_pred hHHHHHHHHHhhc--CCchhHHHHHHHHhhh-hcCCC-CCccc-------------------------------cCCHHH
Q 000880 661 MYSLGIVFFELWH--PFSTAMERQIVLSDLK-QKGEL-PPSWV-------------------------------AKFSEQ 705 (1239)
Q Consensus 661 IwSlGviL~ELlt--Pf~~~~~~~~~~~~~~-~~~~~-p~~~~-------------------------------~~~~e~ 705 (1239)
||..|||+.||+| |.......+..+..+. ..+.+ +..|+ ...+++
T Consensus 212 iWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a 291 (376)
T KOG0669|consen 212 IWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEA 291 (376)
T ss_pred hHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhH
Confidence 9999999999997 5433322222211111 01111 00111 112367
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 706 ESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 706 ~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
.+|+.+||..||.+|+++++++.|.||...+
T Consensus 292 ~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 292 LDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred HHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 8999999999999999999999999987654
No 247
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=5.1e-34 Score=334.28 Aligned_cols=261 Identities=24% Similarity=0.388 Sum_probs=206.2
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++++.||+|+||.||+|.+..+|..||||++............+.+|+.+|+.++||||+++++++.....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 88 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS----- 88 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc-----
Confidence 468999999999999999999999999999999986543333445678899999999999999999988743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
......+|+||+|++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 89 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~g 138 (343)
T cd07880 89 -----------------------------LDRFHDFYLVMPFMGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAG 138 (343)
T ss_pred -----------------------------ccccceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 011245799999998899888764 56999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+||+++.++.+||+|||++...... .....+++.|+|||++.+...++.++|+|
T Consensus 139 i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~ 200 (343)
T cd07880 139 IIHRDLKPGNLAVNEDCELKILDFGLARQTDSE------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIW 200 (343)
T ss_pred eecCCCCHHHEEEcCCCCEEEeecccccccccC------------------ccccccCCcccCHHHHhCCCCCCcHHHHH
Confidence 999999999999999999999999998753211 12346789999999987644588999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC----------------------------CCccccCCHHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------------PPSWVAKFSEQESLLRR 711 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~----------------------------p~~~~~~~~e~~~LI~~ 711 (1239)
||||++|+|++ ||................... ...+...++.+.++|.+
T Consensus 201 slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 280 (343)
T cd07880 201 SVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEK 280 (343)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHH
Confidence 99999999996 776443322222211111000 01123455678999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 000880 712 LMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||+.||.+|||+.++++|+||....
T Consensus 281 ~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 281 MLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred HcCCChhhCCCHHHHhcCccHhhhc
Confidence 9999999999999999999998663
No 248
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.7e-34 Score=327.76 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=203.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..|+..+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-------- 86 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-------- 86 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--------
Confidence 458888999999999999999999999999999875432 33344678899999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....|+||||++|++.+++.. ...+++..+..++.||+.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~ 134 (307)
T cd06607 87 --------------------------------EHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH 134 (307)
T ss_pred --------------------------------CCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999999998887764 45699999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCcch
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 659 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 659 (1239)
||+||||+|+||+++.++.+||+|||++..... .....|++.|+|||++.+ ...++.++
T Consensus 135 ~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~s 195 (307)
T cd06607 135 ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 195 (307)
T ss_pred CceecCCCcccEEECCCCCEEEeecCcceecCC-------------------CCCccCCccccCceeeeccCCCCCCccc
Confidence 999999999999999999999999999875321 123468889999998752 24588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||||||+++|||++ ||.............. ...........+..+.++|.+||+.||++||++.+++.|+|+....
T Consensus 196 Dv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred chHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999999999997 5654433332222221 1111111123456889999999999999999999999999987643
No 249
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.1e-34 Score=318.55 Aligned_cols=254 Identities=30% Similarity=0.479 Sum_probs=209.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||.|++|.||+|.+..+++.||||++...... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYK--------- 70 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcc---------
Confidence 4789999999999999999999999999999998765432 456789999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs-~ 581 (1239)
...+|++|||++ ++|.+++.....+++..++.++.||+.||+|||+ +
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~ 119 (264)
T cd06623 71 -------------------------------EGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR 119 (264)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 357899999997 6999999888889999999999999999999999 9
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
+++||||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++|+
T Consensus 120 ~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~---------------~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv 183 (264)
T cd06623 120 HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD---------------QCNTFVGTVTYMSPERIQG-ESYSYAADI 183 (264)
T ss_pred CCccCCCCHHHEEECCCCCEEEccCccceecccCCC---------------cccceeecccccCHhhhCC-CCCCchhhH
Confidence 999999999999999999999999999876532110 0123468899999999887 578999999
Q ss_pred HHHHHHHHHhhc---CCchhH--HHHHHHHhhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 662 YSLGIVFFELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~--~~~~~~~~~~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
||||+++|+|++ ||.... ........+. ....+..... .+..+.++|.+||..+|++|||+.++++|+|++..
T Consensus 184 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 184 WSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999999997 665543 2222222222 2222222233 56789999999999999999999999999998754
No 250
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=8e-34 Score=319.99 Aligned_cols=250 Identities=28% Similarity=0.376 Sum_probs=195.4
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCc
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
+.....||+|+||.||+|++..++..||+|.+.... ......+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------- 76 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE----------- 76 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-----------
Confidence 334468999999999999999899999999886432 3345678999999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhC
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHF--DKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l--~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...++++|||++ ++|.+++... ..+ ++..+..++.||+.||+|||++
T Consensus 77 -----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 127 (268)
T cd06624 77 -----------------------------NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN 127 (268)
T ss_pred -----------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999996 5999988754 445 8888999999999999999999
Q ss_pred CccccCCCcccEEEcC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCcch
Q 000880 582 GIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKA 659 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ks 659 (1239)
||+||||||+||+++. ++.++|+|||++....... .......|++.|+|||++.+. ..++.++
T Consensus 128 ~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~ 192 (268)
T cd06624 128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN---------------PCTETFTGTLQYMAPEVIDKGPRGYGAPA 192 (268)
T ss_pred CEeecCCCHHHEEEcCCCCeEEEecchhheecccCC---------------CccccCCCCccccChhhhccccccCCchh
Confidence 9999999999999986 6789999999987542111 011234689999999998652 2478999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
||||||+++|+|++ ||...................+.......+++.+++.+||+.+|.+|||+.+++.|||+
T Consensus 193 Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 193 DIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred hhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 99999999999997 66543222211111111122222333456789999999999999999999999999996
No 251
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.5e-34 Score=329.62 Aligned_cols=258 Identities=28% Similarity=0.440 Sum_probs=198.9
Q ss_pred CceEEeeeccCCceEEEEEEEcc--CCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.|++.+.||+|+||.||+|.++. +++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH------ 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC------
Confidence 47889999999999999999998 89999999987533 1222345678999999999999999999987432
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~~~~~~~i~~qI~~gL~ 576 (1239)
....+|+||||++++|.+++... ..+++..++.++.||+.||+
T Consensus 75 --------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 122 (316)
T cd07842 75 --------------------------------ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVH 122 (316)
T ss_pred --------------------------------CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHH
Confidence 23578999999998888777532 26899999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcC----CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 652 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~----~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 652 (1239)
|||+++|+||||||+|||++. ++.+||+|||+++....... .........+|+.|+|||++.+.
T Consensus 123 ~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~~ 190 (316)
T cd07842 123 YLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLK------------PLADLDPVVVTIWYRAPELLLGA 190 (316)
T ss_pred HHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcc------------cccccCCccccccccCHHHHhCC
Confidence 999999999999999999999 89999999999986532210 01122345789999999988775
Q ss_pred CCCCcchhhHHHHHHHHHhhc---CCchhHHHH---------H---HHHhh-----------------------hhcCCC
Q 000880 653 PKIDEKADMYSLGIVFFELWH---PFSTAMERQ---------I---VLSDL-----------------------KQKGEL 694 (1239)
Q Consensus 653 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~---------~---~~~~~-----------------------~~~~~~ 694 (1239)
..++.++|||||||++|+|++ ||....... . ....+ ......
T Consensus 191 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (316)
T cd07842 191 RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTY 270 (316)
T ss_pred CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCC
Confidence 568999999999999999996 654322111 0 00000 000001
Q ss_pred C-C-------ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 695 P-P-------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 695 p-~-------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+ . .+....+++.++|.+||+.||.+|||+.++++||||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 271 PSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 1 0 001344578899999999999999999999999997
No 252
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=6.1e-34 Score=326.50 Aligned_cols=268 Identities=26% Similarity=0.422 Sum_probs=206.1
Q ss_pred cccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
+..++|++.+.||.|+||.||+|.++.+|+.||||+++...........+.+|+.+++.++||||+++++.+.+....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~-- 81 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA-- 81 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh--
Confidence 346789999999999999999999999999999999976544333445678899999999999999999887543100
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
+ ........+|++|||+++++...+... ..+++..++.++.||+.||+|||
T Consensus 82 ----~------------------------~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH 133 (302)
T cd07864 82 ----L------------------------DFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH 133 (302)
T ss_pred ----h------------------------hccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 001123478999999999888877654 46999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++||+||||||+||+++.++.+||+|||++........ .......+++.|+|||++.+...++.++
T Consensus 134 ~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 199 (302)
T cd07864 134 KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES--------------RPYTNKVITLWYRPPELLLGEERYGPAI 199 (302)
T ss_pred hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc--------------cccccceeccCccChHHhcCCCCCCchh
Confidence 99999999999999999999999999999986532210 0112235688999999887645578999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC-CC--------------------------CccccCCHHHHHHH
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LP--------------------------PSWVAKFSEQESLL 709 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~-~p--------------------------~~~~~~~~e~~~LI 709 (1239)
|||||||++|||++ ||.................. .+ ..+...++.+.++|
T Consensus 200 Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 279 (302)
T cd07864 200 DVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLL 279 (302)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHH
Confidence 99999999999997 56543332222111111000 00 01223457889999
Q ss_pred HHccCCCCCCCCCHHHHHhccCC
Q 000880 710 RRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 710 ~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
.+||+.||.+|||+.+++.|+|+
T Consensus 280 ~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 280 DHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHccCChhhCCCHHHHhcCCCC
Confidence 99999999999999999999996
No 253
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.3e-34 Score=336.47 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=195.8
Q ss_pred CCceEEeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~ 497 (1239)
++|++.+.||.|+||.||+|.+.. +++.||+|+++... .......+.+|+.++..+ +||||++++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 478999999999999999997543 45789999987432 233446788999999999 899999999887432
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--------------------
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 556 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 556 (1239)
...++++|||++ ++|.+++...
T Consensus 84 -------------------------------------~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (337)
T cd05054 84 -------------------------------------GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQK 126 (337)
T ss_pred -------------------------------------CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccc
Confidence 346789999996 5888887532
Q ss_pred -----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEE
Q 000880 557 -----------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 595 (1239)
Q Consensus 557 -----------------------------------------~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl 595 (1239)
..+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill 206 (337)
T cd05054 127 EGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL 206 (337)
T ss_pred cccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE
Confidence 257889999999999999999999999999999999999
Q ss_pred cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc--
Q 000880 596 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-- 673 (1239)
Q Consensus 596 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-- 673 (1239)
+.++.+||+|||+++.+.... .........++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 207 ~~~~~vkL~DfG~a~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~SlGv~l~el~t~g 272 (337)
T cd05054 207 SENNVVKICDFGLARDIYKDP-------------DYVRKGDARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLG 272 (337)
T ss_pred eCCCcEEEeccccchhcccCc-------------chhhccCCCCCccccCcHHhcC-CCCCccccHHHHHHHHHHHHHcC
Confidence 999999999999998653211 0111233456788999999987 568999999999999999985
Q ss_pred --CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 674 --PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 674 --Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
||......+.....+. ....+......++++.+++.+||+.+|++||++.+++++
T Consensus 273 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 273 ASPYPGVQIDEEFCRRLK-EGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCCCCCCCccHHHHHHHh-ccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6654332222222222 222222233456789999999999999999999999986
No 254
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.4e-33 Score=317.53 Aligned_cols=255 Identities=25% Similarity=0.442 Sum_probs=205.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
.+|++.+.||+|+||.||+|+++.+|+.||+|.+..... .......+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----- 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP----- 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC-----
Confidence 478999999999999999999999999999999864321 233456788999999999999999999887432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....++++|||++ ++|.+.+.....+++..++.++.||+.||.|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH 123 (264)
T cd06653 77 ---------------------------------EEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH 123 (264)
T ss_pred ---------------------------------CCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2356789999996 589999988778999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++|+||||+||+++.++.++|+|||+++........ ....+...|+..|+|||++.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (264)
T cd06653 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS------------GTGIKSVTGTPYWMSPEVISG-EGYGRKA 190 (264)
T ss_pred hCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc------------CccccccCCcccccCHhhhcC-CCCCccc
Confidence 999999999999999999999999999999864311100 001133568999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
|+|||||++|+|++ ||.............. .+..+..+...++.+.++|.+||. +|..||++.+++.|||
T Consensus 191 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~ 263 (264)
T cd06653 191 DVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPF 263 (264)
T ss_pred cHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc-CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence 99999999999996 7765544444443332 222233334556789999999999 5799999999999997
No 255
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1e-33 Score=329.65 Aligned_cols=256 Identities=29% Similarity=0.496 Sum_probs=203.2
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||.|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||++++++|...
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------- 81 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP------- 81 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-------
Confidence 4689999999999999999999999999999999865444434456788999999999999999999887432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|++|||++++|..++.. ..+++..+..++.||+.||.|||++|
T Consensus 82 --------------------------------~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~ 128 (328)
T cd07856 82 --------------------------------LEDIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAG 128 (328)
T ss_pred --------------------------------CCcEEEEeehhccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 245789999999899888764 45888999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+|||++.++.++|+|||++..... ......+++.|+|||++.+...++.++|||
T Consensus 129 iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 190 (328)
T cd07856 129 VVHRDLKPSNILINENCDLKICDFGLARIQDP------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIW 190 (328)
T ss_pred cccCCCCHHHEeECCCCCEEeCccccccccCC------------------CcCCCcccccccCceeeeccCCcCcHHHHH
Confidence 99999999999999999999999999874321 012346789999999987645689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHH--------------------------hhhhcCCCC--CccccCCHHHHHHHHH
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLS--------------------------DLKQKGELP--PSWVAKFSEQESLLRR 711 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~--------------------------~~~~~~~~p--~~~~~~~~e~~~LI~~ 711 (1239)
||||++|+|++ ||........... ........| ......++++.++|.+
T Consensus 191 slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 270 (328)
T cd07856 191 SAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEK 270 (328)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHH
Confidence 99999999997 6643322111000 000000111 1122345689999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 000880 712 LMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||+.+|.+|||+.+++.|+|+....
T Consensus 271 ~l~~~P~~R~t~~ell~~~~~~~~~ 295 (328)
T cd07856 271 MLVFDPQKRISAAEALAHPYLAPYH 295 (328)
T ss_pred HcCCChhhCCCHHHHhcCCcccccc
Confidence 9999999999999999999997553
No 256
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.7e-34 Score=323.40 Aligned_cols=250 Identities=19% Similarity=0.291 Sum_probs=198.2
Q ss_pred cCCceEEeeeccCCceEEEEEEEc----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
+++|++.+.||+|+||.||+|.+. .++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---- 78 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ---- 78 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec----
Confidence 468999999999999999999863 356789999986432 23344678899999999999999999988632
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-----------------CCCC
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------------DHFD 560 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------------~~l~ 560 (1239)
....|++|||++ ++|.+++... ..++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05090 79 ------------------------------------EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLD 122 (283)
T ss_pred ------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccC
Confidence 345799999996 5899988532 2378
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 000880 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 640 (1239)
Q Consensus 561 ~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 640 (1239)
+..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........++
T Consensus 123 ~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~ 189 (283)
T cd05090 123 HGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADY-------------YRVQPKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcc-------------eecccCCCcc
Confidence 889999999999999999999999999999999999999999999999986532210 0112334567
Q ss_pred ccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 000880 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 716 (1239)
Q Consensus 641 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~d 716 (1239)
..|+|||++.+ ..++.++|||||||++|||++ ||........ ...+. ....++.....++.+.+++.+||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05090 190 IRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-IEMVR-KRQLLPCSEDCPPRMYSLMTECWQEG 266 (283)
T ss_pred ceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHH-cCCcCCCCCCCCHHHHHHHHHHcccC
Confidence 88999999987 568999999999999999996 7765544332 22222 22233344456789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000880 717 PSDRPSATELLQD 729 (1239)
Q Consensus 717 P~~RPta~eiL~~ 729 (1239)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05090 267 PSRRPRFKDIHTR 279 (283)
T ss_pred cccCcCHHHHHHH
Confidence 9999999999875
No 257
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=8.2e-34 Score=330.90 Aligned_cols=264 Identities=25% Similarity=0.320 Sum_probs=204.1
Q ss_pred CceEEeeeccCCceEEEEEEEccC--CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLD--GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~--g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
+|++.+.||+|+||.||+|++..+ +..||||++............+.+|+.+++.+ +||||+++++.+....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----- 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP----- 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-----
Confidence 478899999999999999999988 89999999874433333456788999999999 5999999997653210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
.....+|++|+|++++|.+++.....+++..++.++.||+.||.|||++
T Consensus 76 -------------------------------~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 124 (332)
T cd07857 76 -------------------------------GNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA 124 (332)
T ss_pred -------------------------------ccCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1134578999999999999998888899999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+|||++.++.+||+|||+++.+...... .........||+.|+|||++.+...++.++||
T Consensus 125 givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di 193 (332)
T cd07857 125 NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGE-----------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDV 193 (332)
T ss_pred CcccCCCCHHHeEEcCCCCEEeCcCCCceeccccccc-----------ccccccCcccCccccCcHHHhCCCCCCcHHHH
Confidence 9999999999999999999999999999865322110 00112345799999999988764568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhh-----------------------h---c--CCCCCccccCCHHHHHHHH
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLK-----------------------Q---K--GELPPSWVAKFSEQESLLR 710 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~-----------------------~---~--~~~p~~~~~~~~e~~~LI~ 710 (1239)
|||||++|+|++ ||............+. . . ..++......++.+.+++.
T Consensus 194 ~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (332)
T cd07857 194 WSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLE 273 (332)
T ss_pred HHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHH
Confidence 999999999996 6643322111111000 0 0 0011122234568899999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCc
Q 000880 711 RLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
+||+.||.+|||+.+++.|||+...
T Consensus 274 ~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 274 KLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHccCCcccCCCHHHHhcChhhhhh
Confidence 9999999999999999999987433
No 258
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=6.5e-34 Score=323.45 Aligned_cols=248 Identities=27% Similarity=0.383 Sum_probs=192.2
Q ss_pred eeccCCceEEEEEEEccCCcEEEEEEEecCCCCchh-HHHHHHHHHHHHh---cCCCceeeeeeeeeecCccccCCCCcC
Q 000880 431 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREVATLSR---LQHQHVVRYYQAWFETGVADFDGDSMW 506 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~-~~~~~~Ev~iL~~---L~HpnIv~l~~~~~e~~~~~~~~~~~~ 506 (1239)
.||+|+||.||++.+..+|+.||+|.+......... ...+.+|..+++. .+||||+.+++.+..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------ 68 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT------------ 68 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec------------
Confidence 489999999999999999999999998754332221 2234455444443 479999999887732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 000880 507 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585 (1239)
Q Consensus 507 ~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiH 585 (1239)
...+|+||||++ ++|.+++...+.+++..+..++.||+.||+|||+++|+|
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 120 (279)
T cd05633 69 ----------------------------PDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120 (279)
T ss_pred ----------------------------CCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence 346799999996 589999988888999999999999999999999999999
Q ss_pred cCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHH
Q 000880 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 665 (1239)
Q Consensus 586 rDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 665 (1239)
|||||+|||++.++.++|+|||++...... ......||+.|+|||.+.+...++.++|+||||
T Consensus 121 ~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 183 (279)
T cd05633 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLG 183 (279)
T ss_pred CCCCHHHEEECCCCCEEEccCCcceecccc-----------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHH
Confidence 999999999999999999999998743211 012246899999999986435588999999999
Q ss_pred HHHHHhhc---CCchhHH--HHHHHH-hhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCC
Q 000880 666 IVFFELWH---PFSTAME--RQIVLS-DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 734 (1239)
Q Consensus 666 viL~ELlt---Pf~~~~~--~~~~~~-~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~ 734 (1239)
|++|+|++ ||..... ...... ........ ....++++.++|++||..||.+|| |+.++++||||..
T Consensus 184 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVEL---PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCC---ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 99999997 7753321 111111 11111122 234567899999999999999999 6999999999998
Q ss_pred chHH
Q 000880 735 MEYE 738 (1239)
Q Consensus 735 ~~~~ 738 (1239)
..+.
T Consensus 261 ~~~~ 264 (279)
T cd05633 261 IDWQ 264 (279)
T ss_pred CCHh
Confidence 7643
No 259
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=9.3e-34 Score=317.22 Aligned_cols=245 Identities=22% Similarity=0.374 Sum_probs=195.6
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||+|+||.||++.++ ++..+|+|.+...... ...+.+|+.+|+.++||||+++++++..
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQ--------- 70 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEcc---------
Confidence 57999999999999999999886 5678999987643322 3568899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05114 71 -------------------------------QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN 119 (256)
T ss_pred -------------------------------CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999996 689998875 34689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+||+++.++.+||+|||+++........ ......++..|+|||++.+ ..++.++||
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd05114 120 SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT--------------SSSGAKFPVKWSPPEVFNF-SKYSSKSDV 184 (256)
T ss_pred CccccccCcceEEEcCCCeEEECCCCCccccCCCcee--------------ccCCCCCchhhCChhhccc-Cccchhhhh
Confidence 9999999999999999999999999998764321100 1122346678999999887 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 662 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 662 wSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
||||+++|||++ ||......+........ ..+......+..+.+++.+||+.+|.+||++.++++.
T Consensus 185 ~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 185 WSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG--FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 999999999996 67655544444433322 2222222345689999999999999999999999863
No 260
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=7.9e-34 Score=317.09 Aligned_cols=250 Identities=33% Similarity=0.560 Sum_probs=203.3
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||+|+||.||+|.++.+|..||+|.+............+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~---------- 70 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE---------- 70 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc----------
Confidence 4788999999999999999999999999999997654433445678899999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+++||++ ++|.+++.... .+++..++.++.||+.||.|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (257)
T cd08225 71 ------------------------------NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR 120 (257)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999996 59999887543 479999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCC-EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 582 GIIHRDLTPNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~-vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+++|+||||+||+++.++. +||+|||.+........ ......|++.|+|||++.+ ..++.++|
T Consensus 121 ~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~ape~~~~-~~~~~~~D 184 (257)
T cd08225 121 KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME---------------LAYTCVGTPYYLSPEICQN-RPYNNKTD 184 (257)
T ss_pred CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc---------------cccccCCCccccCHHHHcC-CCCCchhh
Confidence 9999999999999998864 69999999976532110 0122468999999999887 46889999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+|||||++|||++ ||............. ....++.....+.++.++|.+||..+|++|||+.++++|+||
T Consensus 185 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 185 IWSLGCVLYELCTLKHPFEGNNLHQLVLKIC--QGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHHHHHHHHhCCCCCCCccHHHHHHHHh--cccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 9999999999996 776554444433332 222333334456789999999999999999999999999996
No 261
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.1e-34 Score=352.13 Aligned_cols=265 Identities=23% Similarity=0.342 Sum_probs=192.6
Q ss_pred CcccCCceEEeeeccCCceEEEEEEEccCC-cEEEEEEEe--------------c-CCCCchhHHHHHHHHHHHHhcCCC
Q 000880 420 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIR--------------L-KDKSLPVNDRILREVATLSRLQHQ 483 (1239)
Q Consensus 420 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~--------------~-~~~~~~~~~~~~~Ev~iL~~L~Hp 483 (1239)
..+.++|++++.||+|+||+||+|.++... ..+++|.+. . ..........+.+|+.+|+.++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 345689999999999999999999875432 222222111 0 011222345688999999999999
Q ss_pred ceeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-----CC
Q 000880 484 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DH 558 (1239)
Q Consensus 484 nIv~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~ 558 (1239)
|||++++++.. ....|++|+++.++|..++... ..
T Consensus 224 nIv~l~~~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~ 263 (501)
T PHA03210 224 NILKIEEILRS----------------------------------------EANTYMITQKYDFDLYSFMYDEAFDWKDR 263 (501)
T ss_pred CcCcEeEEEEE----------------------------------------CCeeEEEEeccccCHHHHHhhcccccccc
Confidence 99999988733 3467999999998888776432 22
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 000880 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 638 (1239)
Q Consensus 559 l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1239)
.....++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+..... ......+
T Consensus 264 ~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~--------------~~~~~~~ 329 (501)
T PHA03210 264 PLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE--------------AFDYGWV 329 (501)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc--------------ccccccc
Confidence 44667889999999999999999999999999999999999999999999986532110 0123457
Q ss_pred cCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchh--HHHHHHHHhhhhcC----CCC-------------
Q 000880 639 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTA--MERQIVLSDLKQKG----ELP------------- 695 (1239)
Q Consensus 639 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~--~~~~~~~~~~~~~~----~~p------------- 695 (1239)
||+.|+|||++.+ ..++.++|||||||++|||++ ||... .........+.... .+|
T Consensus 330 gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~ 408 (501)
T PHA03210 330 GTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSA 408 (501)
T ss_pred CCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhh
Confidence 9999999999988 569999999999999999996 44321 11111111111000 011
Q ss_pred ----------Ccc--ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHH
Q 000880 696 ----------PSW--VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYEL 739 (1239)
Q Consensus 696 ----------~~~--~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~ 739 (1239)
+.+ .....++.++|.+||+.||.+|||+.++|+||||.......
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~~ 464 (501)
T PHA03210 409 EIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEEE 464 (501)
T ss_pred hcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCchH
Confidence 000 11234567889999999999999999999999998765443
No 262
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.8e-34 Score=319.94 Aligned_cols=253 Identities=20% Similarity=0.267 Sum_probs=196.5
Q ss_pred eEEeeeccCCceEEEEEEEccCCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 427 EELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 427 ~~~~~LG~G~fG~Vy~a~~~~~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
.+.+.||+|+||.||+|.+..++. .||+|.++....+......+.+|+.+++.++||||+++++.+.....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------- 74 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVE------- 74 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCc-------
Confidence 456889999999999999987765 69999987655555556788999999999999999999988743210
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHH
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES------YDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~------~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
.......+++|||++ ++|.+++.. ...+++..++.++.||+.||+|
T Consensus 75 ---------------------------~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 127 (272)
T cd05075 75 ---------------------------SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEY 127 (272)
T ss_pred ---------------------------ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 011235789999996 688887742 2348899999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||+++|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++.
T Consensus 128 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~~~ 193 (272)
T cd05075 128 LSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDY-------------YRQGRIAKMPVKWIAIESLAD-RVYTT 193 (272)
T ss_pred HHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccc-------------eecCCcccCCcccCCHHHccC-CCcCh
Confidence 9999999999999999999999999999999986532210 011123356788999999987 56899
Q ss_pred chhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 658 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
++|||||||++|||++ ||........... +. .+..++.....+..+.++|.+||+.||.+|||+.+++++
T Consensus 194 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 194 KSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY-LR-QGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999999986 6655444333222 22 222233334556789999999999999999999999875
No 263
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-35 Score=312.72 Aligned_cols=261 Identities=24% Similarity=0.405 Sum_probs=213.7
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCcccc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~ 500 (1239)
+++|.++++||+|+|.+|.+++++.|.+.||+|++++.-. ..+...-+..|-.+..+. +||.+|.++.||
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf-------- 320 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF-------- 320 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh--------
Confidence 6899999999999999999999999999999999976432 223344566677777666 799999999877
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
+....+|+|.||++ |+|.-++++..+++++.|+.|..+|+.||.|||
T Consensus 321 --------------------------------qtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh 368 (593)
T KOG0695|consen 321 --------------------------------QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLH 368 (593)
T ss_pred --------------------------------cccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHh
Confidence 23567899999996 589999999999999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|||+||||..|+|||..|++||+|+|+++.--.+. -.++++||||.|.|||++.| ..|++.+
T Consensus 369 ~rgiiyrdlkldnvlldaeghikltdygmcke~l~~g---------------d~tstfcgtpnyiapeilrg-eeygfsv 432 (593)
T KOG0695|consen 369 ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG---------------DTTSTFCGTPNYIAPEILRG-EEYGFSV 432 (593)
T ss_pred hcCeeeeeccccceEEccCCceeecccchhhcCCCCC---------------cccccccCCCcccchhhhcc-cccCcee
Confidence 9999999999999999999999999999998521111 12467899999999999999 6899999
Q ss_pred hhHHHHHHHHHhhc---CCc------hhHHHH-HHHHhh-hhcCCCCCccccCCHHHHHHHHHccCCCCCCCC------C
Q 000880 660 DMYSLGIVFFELWH---PFS------TAMERQ-IVLSDL-KQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP------S 722 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~------~~~~~~-~~~~~~-~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP------t 722 (1239)
|+|+|||+++||+. ||. +.++.+ ...+.+ ....++|.+.+ -.+..+++..|++||.+|. .
T Consensus 433 dwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsls---vkas~vlkgflnkdp~erlgc~~~~g 509 (593)
T KOG0695|consen 433 DWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLS---VKASHVLKGFLNKDPKERLGCRPQTG 509 (593)
T ss_pred hHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceee---hhhHHHHHHhhcCCcHHhcCCCcccc
Confidence 99999999999994 875 122222 233333 33344554433 3677899999999999996 5
Q ss_pred HHHHHhccCCCCchHHHHHH
Q 000880 723 ATELLQDALPPQMEYELLDN 742 (1239)
Q Consensus 723 a~eiL~~~~~~~~~~~~~~~ 742 (1239)
+.++-.|+||....|+.++.
T Consensus 510 ~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 510 FSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred hhhhhcchhhhhCCHHHHhh
Confidence 88999999999999987754
No 264
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.7e-34 Score=335.46 Aligned_cols=262 Identities=26% Similarity=0.419 Sum_probs=207.9
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
..++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 88 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASS---- 88 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc----
Confidence 3578999999999999999999999999999999987544344455678899999999999999999876632210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
......+|+|+||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~ 137 (343)
T cd07851 89 ------------------------------LEDFQDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSA 137 (343)
T ss_pred ------------------------------ccccccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012345899999999999998875 5699999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
||+||||||+||+++.++.+||+|||++...... .....+|+.|+|||.+.+...++.++||
T Consensus 138 gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 199 (343)
T cd07851 138 GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------MTGYVATRWYRAPEIMLNWMHYNQTVDI 199 (343)
T ss_pred CeecCCCCHHHeEECCCCCEEEcccccccccccc------------------ccCCcccccccCHHHHhCCCCCCchHhH
Confidence 9999999999999999999999999999754211 1334688999999998764467899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC----------------------------CCccccCCHHHHHHHH
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------------PPSWVAKFSEQESLLR 710 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~----------------------------p~~~~~~~~e~~~LI~ 710 (1239)
|||||++|||++ ||...........+....+.. ...+...++++.++|.
T Consensus 200 wslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~ 279 (343)
T cd07851 200 WSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLE 279 (343)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHH
Confidence 999999999997 665443333222221111100 0111234678899999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 000880 711 RLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
+||+.||.+|||+.++++|||+.+..
T Consensus 280 ~~l~~~P~~Rpt~~ell~h~~~~~~~ 305 (343)
T cd07851 280 KMLVLDPDKRITAAEALAHPYLAEYH 305 (343)
T ss_pred HhCCCChhhCCCHHHHhcCCCccccC
Confidence 99999999999999999999998764
No 265
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.7e-34 Score=328.82 Aligned_cols=254 Identities=24% Similarity=0.402 Sum_probs=202.1
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
+.|.....||.|+||.||++.+..++..||||.+.... ......+.+|+.+++.++||||+++++.+..
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--------- 90 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--------- 90 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheec---------
Confidence 44555678999999999999999999999999986432 2345678899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....|++|||+++ +|.+++. ...+++..++.++.||+.||.|||++|
T Consensus 91 -------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ 138 (292)
T cd06658 91 -------------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQG 138 (292)
T ss_pred -------------------------------CCeEEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3567999999975 7888774 356899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+||||||+||+++.++.++|+|||++....... .......||+.|+|||.+.+ ..++.++|+|
T Consensus 139 ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 202 (292)
T cd06658 139 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV---------------PKRKSLVGTPYWMAPEVISR-LPYGTEVDIW 202 (292)
T ss_pred EeecCCCHHHEEEcCCCCEEEccCcchhhccccc---------------ccCceeecCccccCHHHHcc-CCCCchhhHH
Confidence 9999999999999999999999999987542111 01133578999999999877 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||||++|||++ ||....................+.....+..+.++|.+||..||.+|||+.++++|+||....
T Consensus 203 slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~ 279 (292)
T cd06658 203 SLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG 279 (292)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence 99999999997 776544433322221111122222234566889999999999999999999999999987543
No 266
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.9e-34 Score=319.19 Aligned_cols=248 Identities=29% Similarity=0.458 Sum_probs=202.1
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCc
Q 000880 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 510 (1239)
Q Consensus 432 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~ 510 (1239)
||.|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++.+.+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------------- 64 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD---------------- 64 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc----------------
Confidence 6999999999999999999999999975443 23345679999999999999999999987632
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 000880 511 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 589 (1239)
Q Consensus 511 ~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLK 589 (1239)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||+++++|+|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 65 ------------------------KKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred ------------------------CCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 356799999996 6999999888889999999999999999999999999999999
Q ss_pred cccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHH
Q 000880 590 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 669 (1239)
Q Consensus 590 p~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 669 (1239)
|+||+++.++.++|+|||++....... ......|++.|+|||.+.+ ..++.++|+||||+++|
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~il~ 183 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKLKSGQ----------------KTWTFCGTPEYVAPEIILN-KGYDFSVDYWSLGILLY 183 (262)
T ss_pred HHHEEEcCCCCEEEeeCCcccccCccc----------------ccccccCCcCccChhHhcC-CCCCChhhhhhhHHHHH
Confidence 999999999999999999998653211 1123468999999999877 56899999999999999
Q ss_pred Hhhc---CCchhH--HHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCCCchH
Q 000880 670 ELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 737 (1239)
Q Consensus 670 ELlt---Pf~~~~--~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~~~~~ 737 (1239)
+|++ ||.... .......... ....+......++++.++|.+||+.||.+||+ +.++++||||....+
T Consensus 184 ~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 184 ELLTGRPPFGEDDEDPMEIYNDILK-GNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred HHHhCCCCcCCCCCCHHHHHHHHhc-cCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence 9996 776554 3223332221 11122222233678999999999999999999 999999999987654
No 267
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1e-33 Score=319.65 Aligned_cols=255 Identities=29% Similarity=0.486 Sum_probs=201.3
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC--------chhHHHHHHHHHHHHhcCCCceeeeeeeeeecC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--------LPVNDRILREVATLSRLQHQHVVRYYQAWFETG 496 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~--------~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~ 496 (1239)
+|.+.+.||.|+||.||+|.+..+|+.||+|.++..... ....+.+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 467788999999999999999989999999988643211 1123467889999999999999999987632
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL 575 (1239)
...+++||||++ ++|.+++...+.+++..+..++.||+.||
T Consensus 80 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l 121 (272)
T cd06629 80 --------------------------------------EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL 121 (272)
T ss_pred --------------------------------------CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 356799999996 59999998888899999999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-C
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-K 654 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~ 654 (1239)
.|||+++++||||||+||+++.++.++|+|||+++...... . ........|+..|+|||.+.+.. .
T Consensus 122 ~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~-----------~~~~~~~~~~~~y~~PE~~~~~~~~ 188 (272)
T cd06629 122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY--D-----------NDQNMSMQGSVFWMAPEVIHSYSQG 188 (272)
T ss_pred HHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccc--c-----------ccccccccCCccccCHHHhccccCC
Confidence 99999999999999999999999999999999997532110 0 00123456899999999987633 4
Q ss_pred CCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhh--cCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 655 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~--~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
++.++|+||||+++|+|++ ||......+........ ....+. .....+..+.++|.+||..+|.+|||+.++++
T Consensus 189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 7899999999999999997 66544333333222211 112222 22344678999999999999999999999999
Q ss_pred ccCC
Q 000880 729 DALP 732 (1239)
Q Consensus 729 ~~~~ 732 (1239)
|||+
T Consensus 269 ~~~~ 272 (272)
T cd06629 269 HPFI 272 (272)
T ss_pred CCCC
Confidence 9986
No 268
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=349.40 Aligned_cols=258 Identities=26% Similarity=0.462 Sum_probs=202.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..+++.+.|.+|||+.||+|+....|..||+|++-.. +....+.+.+||.+|+.|+ |||||.|++......
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~------ 108 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINR------ 108 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccc------
Confidence 3578889999999999999999988899999988654 4456778999999999996 999999997431110
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
........++|.||||. |+|-+++..+ ..|++.++++|+.|+++|+++||
T Consensus 109 ---------------------------~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH 161 (738)
T KOG1989|consen 109 ---------------------------SSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH 161 (738)
T ss_pred ---------------------------cCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh
Confidence 00111356789999997 6999999843 56999999999999999999999
Q ss_pred hCC--ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccc--cCcccccCccCCCcccccCC--C
Q 000880 580 GQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV--DGTGQVGTYFYTAPEIEQGW--P 653 (1239)
Q Consensus 580 s~g--IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~GT~~Y~APE~l~~~--~ 653 (1239)
... |||||||-+||||+.+++.||||||.|+-.... ++....... ......-|+.|.|||++.-+ .
T Consensus 162 ~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~--------~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~ 233 (738)
T KOG1989|consen 162 YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILS--------PTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGL 233 (738)
T ss_pred cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCC--------CccHHHHHHHHHHHHhhCCccccChHHHhhhcCC
Confidence 998 999999999999999999999999999743211 100000000 11223579999999985421 4
Q ss_pred CCCcchhhHHHHHHHHHhh---cCCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 654 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 654 ~~~~ksDIwSlGviL~ELl---tPf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
..+.|+|||+|||+||-|+ +||..... +.++..+..+|+. +..+..+.+||+.||+.||.+||++.+++.+
T Consensus 234 pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 234 PIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred CCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 5899999999999999998 49865432 3455556677765 5667799999999999999999999999875
No 269
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=6.8e-34 Score=339.19 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=195.4
Q ss_pred cCCceEEeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 496 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~ 496 (1239)
.++|.+.+.||+|+||.||+|.+... +..||||+++... .....+.+.+|+.+|+.+. |||||+++++|.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-- 112 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-- 112 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--
Confidence 36788999999999999999987533 3479999986433 2334567999999999996 9999999998832
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-------------------
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 556 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 556 (1239)
...+|||||||+ |+|.+++...
T Consensus 113 --------------------------------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 154 (400)
T cd05105 113 --------------------------------------SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIF 154 (400)
T ss_pred --------------------------------------CCceEEEEEecCCCcHHHHHHHhhhhhhcccccccccccccc
Confidence 346799999996 6898887542
Q ss_pred -----------------------------------------------------------------------------CCC
Q 000880 557 -----------------------------------------------------------------------------DHF 559 (1239)
Q Consensus 557 -----------------------------------------------------------------------------~~l 559 (1239)
..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 234 (400)
T cd05105 155 GINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGL 234 (400)
T ss_pred CCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCC
Confidence 236
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 000880 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 639 (1239)
Q Consensus 560 ~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 639 (1239)
++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ........+
T Consensus 235 ~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~ 301 (400)
T cd05105 235 TTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN-------------YVSKGSTFL 301 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc-------------ccccCCcCC
Confidence 7788899999999999999999999999999999999999999999999986432110 011123457
Q ss_pred CccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCC
Q 000880 640 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 715 (1239)
Q Consensus 640 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~ 715 (1239)
++.|+|||++.+ ..++.++|||||||++|||++ ||............+.. ...++.....++++.++|.+||+.
T Consensus 302 ~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~ 379 (400)
T cd05105 302 PVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKS-GYRMAKPDHATQEVYDIMVKCWNS 379 (400)
T ss_pred CcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhc-CCCCCCCccCCHHHHHHHHHHCcc
Confidence 889999999987 568999999999999999984 66554333333333332 222333345667899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000880 716 SPSDRPSATELLQD 729 (1239)
Q Consensus 716 dP~~RPta~eiL~~ 729 (1239)
||++|||+.++.+.
T Consensus 380 dP~~RPt~~~l~~~ 393 (400)
T cd05105 380 EPEKRPSFLHLSDI 393 (400)
T ss_pred CHhHCcCHHHHHHH
Confidence 99999999998763
No 270
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.1e-33 Score=320.58 Aligned_cols=250 Identities=21% Similarity=0.284 Sum_probs=194.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
.++|++.+.||+|+||.||+|.++. ++..||||++... ........+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--- 80 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 80 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 3679999999999999999998752 3568999988532 223345578999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC----------CCCHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------HFDKELAWH 566 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~l~~~~~~~ 566 (1239)
....++||||++ ++|.+++.... .++...+..
T Consensus 81 -------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05062 81 -------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQ 123 (277)
T ss_pred -------------------------------------CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHH
Confidence 345789999997 59999886532 356788899
Q ss_pred HHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 000880 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 646 (1239)
Q Consensus 567 i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 646 (1239)
++.|++.||.|||++|++||||||+|||++.++.++|+|||+++........ .......+++.|+||
T Consensus 124 ~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05062 124 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMSP 190 (277)
T ss_pred HHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee-------------ecCCCCccCHhhcCh
Confidence 9999999999999999999999999999999999999999998754321110 011223567899999
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 000880 647 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 722 (1239)
Q Consensus 647 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 722 (1239)
|++.+ ..++.++|||||||++|||++ ||............. ....++.....++.+.+++.+||+.||.+|||
T Consensus 191 E~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 267 (277)
T cd05062 191 ESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM--EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 267 (277)
T ss_pred hHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 99987 568999999999999999985 665544433322222 22223333345678999999999999999999
Q ss_pred HHHHHhc
Q 000880 723 ATELLQD 729 (1239)
Q Consensus 723 a~eiL~~ 729 (1239)
+.+++++
T Consensus 268 ~~e~l~~ 274 (277)
T cd05062 268 FLEIISS 274 (277)
T ss_pred HHHHHHH
Confidence 9999875
No 271
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.2e-33 Score=329.77 Aligned_cols=272 Identities=25% Similarity=0.384 Sum_probs=205.9
Q ss_pred CCceE-EeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCch------------hHHHHHHHHHHHHhcCCCceeeeee
Q 000880 424 NDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------------VNDRILREVATLSRLQHQHVVRYYQ 490 (1239)
Q Consensus 424 ~~y~~-~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------------~~~~~~~Ev~iL~~L~HpnIv~l~~ 490 (1239)
++|.. .+.||.|+||+||+|.++.+++.||||+++....... ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45554 4679999999999999999999999999875432210 0124779999999999999999998
Q ss_pred eeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHH
Q 000880 491 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ 570 (1239)
Q Consensus 491 ~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~q 570 (1239)
++.. ...+|++|||++++|.+++.....+++..+..++.|
T Consensus 88 ~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~q 127 (335)
T PTZ00024 88 VYVE----------------------------------------GDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQ 127 (335)
T ss_pred EEec----------------------------------------CCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHH
Confidence 8732 356899999999999999988888999999999999
Q ss_pred HHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 000880 571 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 650 (1239)
Q Consensus 571 I~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 650 (1239)
|+.||+|||++|++||||||+||+++.++.+||+|||++............... .............+++.|+|||.+.
T Consensus 128 l~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~aPE~~~ 206 (335)
T PTZ00024 128 ILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKD-ETMQRREEMTSKVVTLWYRAPELLM 206 (335)
T ss_pred HHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccccc-ccccccccccccccccCCCCChhcc
Confidence 999999999999999999999999999999999999999865422211100000 0000111223456789999999988
Q ss_pred CCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCC---------------------CCC----ccccCC
Q 000880 651 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------LPP----SWVAKF 702 (1239)
Q Consensus 651 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~---------------------~p~----~~~~~~ 702 (1239)
+...++.++|+|||||++|||++ ||...........+....+. .+. .....+
T Consensus 207 ~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (335)
T PTZ00024 207 GAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNAS 286 (335)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCC
Confidence 75557999999999999999997 66544433322221110000 000 112335
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 703 SEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 703 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
.++.++|.+||+.+|.+|||+++++.|+||....
T Consensus 287 ~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 287 DDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred hHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 6788999999999999999999999999998775
No 272
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-36 Score=368.15 Aligned_cols=252 Identities=31% Similarity=0.458 Sum_probs=208.5
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 509 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g 509 (1239)
..||.|.||.||-|.+..+|...|+|-|+...........+.+|..+|..++|||+|+|||+=+
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv---------------- 1304 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV---------------- 1304 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee----------------
Confidence 5799999999999999999999999999876655556677899999999999999999998732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 000880 510 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588 (1239)
Q Consensus 510 ~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDL 588 (1239)
+...++|.||||. |+|.+++...+-.++.....|..|++.|++|||++|||||||
T Consensus 1305 ------------------------HRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDI 1360 (1509)
T KOG4645|consen 1305 ------------------------HREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDI 1360 (1509)
T ss_pred ------------------------cHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCC
Confidence 3456789999995 799999988888889999999999999999999999999999
Q ss_pred CcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--CCCcchhhHHHHH
Q 000880 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADMYSLGI 666 (1239)
Q Consensus 589 Kp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~ksDIwSlGv 666 (1239)
||.||+|+.+|.+|++|||.|..+..+... ....-.+.+|||.|||||++.+.. ....++||||+||
T Consensus 1361 K~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~-----------~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGC 1429 (1509)
T KOG4645|consen 1361 KPANILLDFNGLIKYGDFGSAVKIKNNAQT-----------MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGC 1429 (1509)
T ss_pred CccceeeecCCcEEeecccceeEecCchhc-----------CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccc
Confidence 999999999999999999999987544211 111234679999999999998732 2567999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
++.||+| ||....+.=..+-.+. -+..|+.+...+++.++||.+||..||++|+++.|++.|.|-.
T Consensus 1430 VVlEM~tGkrPW~~~dne~aIMy~V~-~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1430 VVLEMATGKRPWAELDNEWAIMYHVA-AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred eEEEeecCCCchhhccchhHHHhHHh-ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence 9999998 7765544333333322 2444555555788999999999999999999999999997644
No 273
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.1e-33 Score=320.81 Aligned_cols=249 Identities=23% Similarity=0.348 Sum_probs=197.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.++|++++.||+|+||+||+|++..+|. .||+|+++.. ........+.+|+.+++.++||||+++++.+..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC----
Confidence 4689999999999999999999987776 4899988643 333445678999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~ 576 (1239)
...+++|+|++ |+|.+++... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (279)
T cd05109 81 -------------------------------------STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMS 123 (279)
T ss_pred -------------------------------------CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence 23578999996 6999988764 56999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||+++|+||||||+|||++.++.+||+|||+++........ .......+++.|+|||++.+ ..++
T Consensus 124 ~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~-------------~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (279)
T cd05109 124 YLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE-------------YHADGGKVPIKWMALESILH-RRFT 189 (279)
T ss_pred HHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccce-------------eecCCCccchhhCCHHHhcc-CCCC
Confidence 999999999999999999999999999999999865321100 01122345778999999887 5689
Q ss_pred cchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 657 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
.++|||||||++|||++ ||......... ..+. ....++.....+.++.++|.+||+.||++||++.+++..
T Consensus 190 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 190 HQSDVWSYGVTVWELMTFGAKPYDGIPAREIP-DLLE-KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHH-CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999875 65543333222 2222 333333445567789999999999999999999999853
No 274
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=9.9e-34 Score=331.71 Aligned_cols=272 Identities=28% Similarity=0.385 Sum_probs=205.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..+|.+.+.||.|+||.||+|.++.+|+.||+|++..... .....+.+|+.+++.++||||+++++++...+...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~--- 78 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDL--- 78 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccc---
Confidence 3689999999999999999999999999999999876543 34567889999999999999999998764332100
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
.+ ..........+|++|||++++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 79 --~~---------------------~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g 134 (342)
T cd07854 79 --TE---------------------DVGSLTELNSVYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSAN 134 (342)
T ss_pred --cc---------------------ccccccccceEEEEeecccccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 00 0001123457899999999999888754 46899999999999999999999999
Q ss_pred ccccCCCcccEEEcC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 583 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 583 IiHrDLKp~NILl~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|+||||||+||+++. ++.+||+|||+++........ ........||..|+|||++.+...++.++||
T Consensus 135 ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 202 (342)
T cd07854 135 VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDM 202 (342)
T ss_pred cccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------ccccccccccccccCHHHHhCccccCchhhH
Confidence 999999999999985 457899999999764321100 0001223688999999987654568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhc----------------------CC---CC--CccccCCHHHHHHHHH
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------GE---LP--PSWVAKFSEQESLLRR 711 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~----------------------~~---~p--~~~~~~~~e~~~LI~~ 711 (1239)
|||||++|+|++ ||....+.......+... .. .+ ........++.+||.+
T Consensus 203 wSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (342)
T cd07854 203 WAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQ 282 (342)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHH
Confidence 999999999996 776444333222211100 00 00 0112345678899999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 000880 712 LMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 712 ~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
||+.||.+|||+.++++|+||+..
T Consensus 283 ~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 283 ILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HhCCCchhccCHHHHhCCCccccc
Confidence 999999999999999999999754
No 275
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=8.7e-34 Score=321.09 Aligned_cols=253 Identities=28% Similarity=0.439 Sum_probs=203.4
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCceeeeeeeeeecCccccC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.|+..+.||.|+||.||+|.+..+++.||+|.++... .......+.+|+.+++.++ ||||++++++|..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~------- 73 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK------- 73 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-------
Confidence 4778899999999999999999999999999987542 2334567889999999996 9999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
....|++|||++ ++|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~ 119 (277)
T cd06917 74 ---------------------------------GPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHK 119 (277)
T ss_pred ---------------------------------CCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356799999996 589888865 479999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
.||+|+||+|+||+++.++.++|+|||++....... .......|++.|+|||.+.+...++.++|
T Consensus 120 ~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 184 (277)
T cd06917 120 VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS---------------SKRSTFVGTPYWMAPEVITEGKYYDTKAD 184 (277)
T ss_pred CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc---------------cccccccCCcceeCHHHhccCCccccchh
Confidence 999999999999999999999999999997653221 01133468999999999876455789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccc-cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~-~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
+|||||++|+|++ ||............. ....+.... ..+.++.++|.+||..||++||++.+++.|+|+.+..
T Consensus 185 v~slG~~l~~ll~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 185 IWSLGITIYEMATGNPPYSDVDAFRAMMLIP--KSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHHHHHhCCCCCCCCChhhhhhccc--cCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 9999999999996 776544333222111 111111111 2567899999999999999999999999999997765
No 276
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.7e-33 Score=314.22 Aligned_cols=242 Identities=22% Similarity=0.342 Sum_probs=189.8
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 509 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g 509 (1239)
+.||+|+||.||+|+++.+++.||+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 64 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--------------- 64 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---------------
Confidence 3699999999999999999999999987632 333445679999999999999999999988732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 510 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 510 ~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
...+|+||||++ ++|.+++.... .+++..++.++.|++.||+|||++|++|||
T Consensus 65 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 119 (252)
T cd05084 65 -------------------------KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRD 119 (252)
T ss_pred -------------------------CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 345799999996 58999987544 589999999999999999999999999999
Q ss_pred CCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHH
Q 000880 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 667 (1239)
Q Consensus 588 LKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 667 (1239)
|||+|||++.++.+||+|||++........ ........++..|+|||.+.+ ..++.++|||||||+
T Consensus 120 l~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i 185 (252)
T cd05084 120 LAARNCLVTEKNVLKISDFGMSREEEDGVY-------------ASTGGMKQIPVKWTAPEALNY-GRYSSESDVWSFGIL 185 (252)
T ss_pred cchheEEEcCCCcEEECccccCcccccccc-------------cccCCCCCCceeecCchhhcC-CCCChHHHHHHHHHH
Confidence 999999999999999999999875421100 000111233567999999987 568999999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 668 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 668 L~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
+|||++ ||.......... ... ....++.....+..+.+++.+||+.+|++|||+.++++
T Consensus 186 l~e~~~~~~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 186 LWEAFSLGAVPYANLSNQQTRE-AIE-QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHHhCCCCCccccCHHHHHH-HHH-cCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999985 565443333222 221 11222233345678999999999999999999999985
No 277
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.4e-34 Score=321.52 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=197.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
..+|.+.+.||+|+||.||+|.+.. ++..||||+++... .......+.+|+.+|+.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 79 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTE--- 79 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEec---
Confidence 3578889999999999999998853 36789999986432 22345689999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--------------CCCCHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------------DHFDKE 562 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------------~~l~~~ 562 (1239)
...+|++|||++ ++|.+++... ..+++.
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05049 80 -------------------------------------GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122 (280)
T ss_pred -------------------------------------CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHH
Confidence 246799999996 6999998754 237888
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 000880 563 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 642 (1239)
Q Consensus 563 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 642 (1239)
.+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++....... ........+++.
T Consensus 123 ~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05049 123 QLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY-------------YRVGGHTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcc-------------eecCCCCcccce
Confidence 9999999999999999999999999999999999999999999999875421110 001123356789
Q ss_pred CCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 000880 643 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 718 (1239)
Q Consensus 643 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 718 (1239)
|+|||++.+ ..++.++|||||||++|||++ ||............. .+..+......+..+.+++.+||+.||+
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~ 266 (280)
T cd05049 190 WMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT--QGRLLQRPRTCPSEVYDIMLGCWKRDPQ 266 (280)
T ss_pred ecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 999999987 568999999999999999996 665544443333322 2333333345667899999999999999
Q ss_pred CCCCHHHHHhc
Q 000880 719 DRPSATELLQD 729 (1239)
Q Consensus 719 ~RPta~eiL~~ 729 (1239)
+||++.++++.
T Consensus 267 ~Rp~~~eil~~ 277 (280)
T cd05049 267 QRINIKDIHER 277 (280)
T ss_pred cCCCHHHHHHH
Confidence 99999999863
No 278
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.1e-33 Score=320.52 Aligned_cols=256 Identities=22% Similarity=0.303 Sum_probs=197.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
.++|++.+.||+|+||.||+|.++. .+..||+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--- 80 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 3689999999999999999998752 35589999876432 23334568899999999999999999988632
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----------CCCCHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 566 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~~~~~~~ 566 (1239)
....|++|||++ |+|.+++... ..++...+..
T Consensus 81 -------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (288)
T cd05061 81 -------------------------------------GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 123 (288)
T ss_pred -------------------------------------CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHH
Confidence 235699999996 6999998653 2246678899
Q ss_pred HHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 000880 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 646 (1239)
Q Consensus 567 i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 646 (1239)
++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++....... ........++..|+||
T Consensus 124 ~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~p 190 (288)
T cd05061 124 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-------------YRKGGKGLLPVRWMAP 190 (288)
T ss_pred HHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccccc-------------ccccCCCcccccccCH
Confidence 999999999999999999999999999999999999999999985432110 0011223567889999
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 000880 647 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 722 (1239)
Q Consensus 647 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 722 (1239)
|.+.+ ..++.++|+|||||++|||++ ||............. .+..++.....++.+.+++.+||+.||.+|||
T Consensus 191 E~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 267 (288)
T cd05061 191 ESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 267 (288)
T ss_pred HHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 99887 568999999999999999985 776544443322222 22223333345678999999999999999999
Q ss_pred HHHHHh------ccCCCCc
Q 000880 723 ATELLQ------DALPPQM 735 (1239)
Q Consensus 723 a~eiL~------~~~~~~~ 735 (1239)
+.++++ ||||...
T Consensus 268 ~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 268 FLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHHHHHhhcCCCCCCC
Confidence 999986 6666554
No 279
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.8e-33 Score=316.44 Aligned_cols=246 Identities=23% Similarity=0.318 Sum_probs=196.8
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|.+.+.||+|+||.||+|.++.+++.||+|++... ......+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--------- 73 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcC---------
Confidence 5788999999999999999999999999999988632 2234578899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...++++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~ 122 (263)
T cd05052 74 -------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 122 (263)
T ss_pred -------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345799999996 6899988653 358999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+|++||||||+|||++.++.+||+|||++......... ......+++.|+|||.+.+ ..++.++|
T Consensus 123 ~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (263)
T cd05052 123 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT--------------AHAGAKFPIKWTAPESLAY-NKFSIKSD 187 (263)
T ss_pred CCEeecccCcceEEEcCCCcEEeCCCccccccccceee--------------ccCCCCCccccCCHHHhcc-CCCCchhH
Confidence 99999999999999999999999999999865322100 0112245678999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 661 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 661 IwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
||||||++|||++ ||......... ..+. ....++.....++++.++|.+||+.||++|||+.++++.
T Consensus 188 v~slG~il~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 188 VWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLE-KGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHH-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 9999999999986 66544333222 2222 122223334566799999999999999999999999864
No 280
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.8e-34 Score=326.39 Aligned_cols=252 Identities=24% Similarity=0.434 Sum_probs=201.3
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
.|+....||.|+||.||+|.+..+++.||||++..... .....+.+|+.+++.++||||+++++.+..
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~---------- 89 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLV---------- 89 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheee----------
Confidence 34445689999999999999999999999999875433 234568899999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....|++|||++ ++|..++.. ..+++..++.++.||+.||.|||++|+
T Consensus 90 ------------------------------~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i 138 (297)
T cd06659 90 ------------------------------GEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGV 138 (297)
T ss_pred ------------------------------CCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 356899999997 478776644 568999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+ ..++.++||||
T Consensus 139 vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 202 (297)
T cd06659 139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------PKRKSLVGTPYWMAPEVISR-TPYGTEVDIWS 202 (297)
T ss_pred ecCCCCHHHeEEccCCcEEEeechhHhhccccc---------------ccccceecCccccCHHHHcc-CCCCchhhHHH
Confidence 999999999999999999999999987542211 01133578999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
|||++|||++ ||......+...............+...++.+.++|.+||+.+|.+||++.++++|+|+.+.
T Consensus 203 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 203 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 9999999997 66554443333222111111222333456788999999999999999999999999988755
No 281
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.1e-34 Score=318.95 Aligned_cols=248 Identities=27% Similarity=0.512 Sum_probs=197.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||+|+||.||+|.++.+|+.||||.+..... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 73 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-------- 73 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe--------
Confidence 578899999999999999999999999999998875432 23344678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
...++++|||++ ++|.+++.. ...+++..++.++.||+.||.|
T Consensus 74 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 121 (267)
T cd08229 74 --------------------------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999997 589888763 3458999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++|++|+||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.
T Consensus 122 LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~ape~~~~-~~~~~ 185 (267)
T cd08229 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC---------------cccccccCCcCccCHHHhcC-CCccc
Confidence 999999999999999999999999999999987653211 01123468999999999987 56889
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHH-HHHHHhhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~~~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
++|+||||+++|+|++ ||...... ......+. ....++ .....++++.++|.+||+.||.+|||+.+|++
T Consensus 186 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred hhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh-cCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999999999997 66533221 12222222 122222 22345678999999999999999999998875
No 282
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.1e-33 Score=320.87 Aligned_cols=253 Identities=29% Similarity=0.445 Sum_probs=204.8
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
..|+.++.||.|+||.||+|.+..++..||||++..... ......+.+|+.+++.+.||||+++++++..
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--------- 73 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE---------
Confidence 357778999999999999999998999999999875432 3445678999999999999999999998743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....|+||||++ ++|.+++.. ..+++..+..++.|++.||+|||+++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 74 -------------------------------GTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 357899999996 589888864 56899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~~~Dv~ 185 (277)
T cd06640 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIQQ-SAYDSKADIW 185 (277)
T ss_pred ccCcCCChhhEEEcCCCCEEEcccccceeccCCc---------------cccccccCcccccCHhHhcc-CCCccHHHHH
Confidence 9999999999999999999999999997542211 01123468889999999887 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||||++|||++ ||............ .....+......+..+.++|.+||..+|.+||++.++++|+|+.+..
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 186 SLGITAIELAKGEPPNSDMHPMRVLFLI--PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred HHHHHHHHHHHCCCCCCCcChHhHhhhh--hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 99999999997 66544433322221 11222333334456889999999999999999999999999987654
No 283
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.8e-33 Score=317.11 Aligned_cols=254 Identities=20% Similarity=0.272 Sum_probs=197.8
Q ss_pred ceEEeeeccCCceEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
|.+.+.||+|+||.||+|.+..+ +..||||.++...........+.+|+..++.++||||+++++.+.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----- 75 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASS----- 75 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCc-----
Confidence 46778999999999999998754 4789999998655555556789999999999999999999988743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~~~~~~~i~~qI~~gL 575 (1239)
.......+++|||++ ++|..++... ..+++..++.++.||+.||
T Consensus 76 -----------------------------~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL 126 (273)
T cd05035 76 -----------------------------LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126 (273)
T ss_pred -----------------------------cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHH
Confidence 012356799999996 6898887432 3589999999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 655 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 655 (1239)
.|||+++++||||||+||+++.++.+||+|||+++........ .......++..|+|||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05035 127 EYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYY-------------RQGRIAKMPVKWIAIESLAD-RVY 192 (273)
T ss_pred HHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccc-------------cccccccCCccccCHhhccc-CCC
Confidence 9999999999999999999999999999999999865322110 01122345678999999876 568
Q ss_pred CcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 656 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+.++|||||||++|||++ ||......+..... . .+..+......++++.++|.+||+.||.+|||+.+++++
T Consensus 193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 193 TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYL-R-HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-H-cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999985 56554443333222 2 222333344567799999999999999999999999875
No 284
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.1e-34 Score=321.47 Aligned_cols=245 Identities=29% Similarity=0.498 Sum_probs=191.4
Q ss_pred eEEeeeccCCceEEEEEEEc----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 427 EELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 427 ~~~~~LG~G~fG~Vy~a~~~----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++.+.||.|.||.||+|.+. ..+..|+||.++. .........+.+|+..+++++||||+++++++...
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~------- 73 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN------- 73 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-------
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeeccccccccccccccccccccccc-------
Confidence 46789999999999999998 4467899999953 33444578899999999999999999999998532
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
..+++|||||+ |+|.+++... ..+++...+.++.||+.||.|||
T Consensus 74 ---------------------------------~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh 120 (259)
T PF07714_consen 74 ---------------------------------EPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH 120 (259)
T ss_dssp ---------------------------------SSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 23789999997 6999999876 67999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+++++|++|+++|||++.++.+||+|||++........ ........+...|+|||.+.+ ..++.++
T Consensus 121 ~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~-------------~~~~~~~~~~~~~~aPE~~~~-~~~~~ks 186 (259)
T PF07714_consen 121 SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK-------------YKNDSSQQLPLRYLAPEVLKD-GEYTKKS 186 (259)
T ss_dssp HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-------------EEESTTSESGGGGS-HHHHHH-SEESHHH
T ss_pred cccccccccccccccccccccccccccccccccccccc-------------ccccccccccccccccccccc-ccccccc
Confidence 99999999999999999999999999999986521110 011223457789999999987 4589999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
||||||+++|||++ ||......+..... . .+..++.....+..+.++|.+||+.||.+|||+.+|++
T Consensus 187 DVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 187 DVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-K-QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-H-TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccccccccccccccccccccccccccccc-c-ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 99999999999997 67665444433333 2 33334444456778999999999999999999999986
No 285
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.6e-33 Score=319.91 Aligned_cols=249 Identities=27% Similarity=0.393 Sum_probs=194.1
Q ss_pred eeccCCceEEEEEEEccCCcEEEEEEEecCCCCchh-HHHHHHHH---HHHHhcCCCceeeeeeeeeecCccccCCCCcC
Q 000880 431 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREV---ATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 506 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~-~~~~~~Ev---~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~ 506 (1239)
.||+|+||.||+|.+..+++.||+|++......... ...+..|. ..++...||||+++++++..
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------ 68 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT------------ 68 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec------------
Confidence 489999999999999989999999998754322111 22233443 34445689999999877632
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 000880 507 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585 (1239)
Q Consensus 507 ~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiH 585 (1239)
...+|+||||++ ++|.+++...+.+++..++.++.|++.||+|||+++|+|
T Consensus 69 ----------------------------~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 120 (278)
T cd05606 69 ----------------------------PDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120 (278)
T ss_pred ----------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 357899999996 589998888788999999999999999999999999999
Q ss_pred cCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHH
Q 000880 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 665 (1239)
Q Consensus 586 rDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 665 (1239)
|||||+||+++.++.+||+|||++...... .....+||+.|+|||++.+...++.++||||+|
T Consensus 121 ~di~p~nili~~~~~~kl~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G 183 (278)
T cd05606 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 183 (278)
T ss_pred CCCCHHHEEECCCCCEEEccCcCccccCcc-----------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHH
Confidence 999999999999999999999998753211 012347999999999987644689999999999
Q ss_pred HHHHHhhc---CCchhHH---HHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCC
Q 000880 666 IVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 734 (1239)
Q Consensus 666 viL~ELlt---Pf~~~~~---~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~ 734 (1239)
|++|||++ ||..... ..............| ...++++.+++.+||..+|.+|| ++.++++|+||..
T Consensus 184 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred HHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCC---CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence 99999996 7754421 111111111111222 23467999999999999999999 9999999999998
Q ss_pred chHHH
Q 000880 735 MEYEL 739 (1239)
Q Consensus 735 ~~~~~ 739 (1239)
..+..
T Consensus 261 ~~~~~ 265 (278)
T cd05606 261 LDWQM 265 (278)
T ss_pred CCchH
Confidence 87553
No 286
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3e-33 Score=319.01 Aligned_cols=257 Identities=26% Similarity=0.456 Sum_probs=201.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|+..+.||.|++|.||+|.+..+++.||+|.+..... ......+.+|+.+++.++||||++++++|...
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 71 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDE-------- 71 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc--------
Confidence 478999999999999999999998999999999875433 24456799999999999999999999887432
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
....+|+||||++ ++|.+++.. ...+++..+..++.||+.||.||
T Consensus 72 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l 121 (287)
T cd06621 72 ------------------------------SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL 121 (287)
T ss_pred ------------------------------CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2346899999996 588887653 34588999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|+.|++|+||+|+||+++.++.++|+|||++....... .....++..|+|||.+.+ ..++.+
T Consensus 122 H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-----------------~~~~~~~~~y~~pE~~~~-~~~~~~ 183 (287)
T cd06621 122 HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-----------------AGTFTGTSFYMAPERIQG-KPYSIT 183 (287)
T ss_pred HHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-----------------cccccCCccccCHHHhcC-CCCCch
Confidence 99999999999999999999999999999987542110 112357889999999887 568999
Q ss_pred hhhHHHHHHHHHhhc---CCchhH-----HHHHHHHhhhhc-CCCCCcc---ccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 000880 659 ADMYSLGIVFFELWH---PFSTAM-----ERQIVLSDLKQK-GELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATEL 726 (1239)
Q Consensus 659 sDIwSlGviL~ELlt---Pf~~~~-----~~~~~~~~~~~~-~~~p~~~---~~~~~e~~~LI~~~L~~dP~~RPta~ei 726 (1239)
+|||||||++|+|++ ||.... ..+......... ...+... ...++.+.++|.+||..+|.+|||+.++
T Consensus 184 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ei 263 (287)
T cd06621 184 SDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDM 263 (287)
T ss_pred hhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHH
Confidence 999999999999997 665431 111111111101 1111111 1224578999999999999999999999
Q ss_pred HhccCCCCchH
Q 000880 727 LQDALPPQMEY 737 (1239)
Q Consensus 727 L~~~~~~~~~~ 737 (1239)
++|+|+.+...
T Consensus 264 l~~~~~~~~~~ 274 (287)
T cd06621 264 LEHPWIKAQMK 274 (287)
T ss_pred HhCcccccccc
Confidence 99999976643
No 287
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.7e-33 Score=314.65 Aligned_cols=248 Identities=28% Similarity=0.522 Sum_probs=198.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++|++.+.||.|+||.||+|.+..+|+.||+|.++.... .......+.+|+.+++.++|+||+++++++..
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-------- 73 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-------- 73 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--------
Confidence 579999999999999999999999999999999875433 22335678999999999999999999988733
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....+++|||++ ++|..++.. ...+++..++.++.||+.||.|
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 121 (267)
T cd08224 74 --------------------------------NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHH
Confidence 346799999997 599988854 3458999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++|++||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.
T Consensus 122 lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~ 185 (267)
T cd08224 122 MHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC---------------cccceecCCccccCHHHhcc-CCCCc
Confidence 999999999999999999999999999999987543211 01123468899999999887 56899
Q ss_pred chhhHHHHHHHHHhhc---CCchhH-HHHHHHHhhhhcCCCCCccc-cCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 658 KADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~~~~~~~~p~~~~-~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
++|||||||++|+|++ ||.... .......... .+..++... ..+..+.++|.+||..+|++|||+.+|++
T Consensus 186 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-KCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred hhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh-cCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999997 664322 1111222222 222332222 45568899999999999999999999986
No 288
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.5e-33 Score=310.66 Aligned_cols=256 Identities=32% Similarity=0.497 Sum_probs=208.8
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|...+.||+|++|.||+|.+..+++.|++|++............+.+|+.++++++||||+++++.+...
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE--------- 71 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---------
Confidence 47788999999999999999999999999999976654445667899999999999999999999887431
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....++++|||++ ++|.+++.....+++..++.++.|++.||+|||+.|+
T Consensus 72 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 72 -----------------------------EKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred -----------------------------CCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 0257899999995 6999999888899999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+|+||+|+||+++.++.++|+|||.+......... .......++..|+|||.+.+ ..++.++||||
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~s 188 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-------------EGTGSVRGTPYWMAPEVIRG-EEYGRAADIWS 188 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEeccccccc-------------ccccCCCCCccccCHhhhcC-CCCCchhhHHH
Confidence 99999999999999999999999999865432110 00123468899999999887 45899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
||+++|+|++ ||............+......+......+..+.++|.+||+.||.+||++.++++|||+
T Consensus 189 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 189 LGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 9999999997 77655422222222222223333333446789999999999999999999999999996
No 289
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.5e-33 Score=322.32 Aligned_cols=252 Identities=23% Similarity=0.277 Sum_probs=196.7
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCC----------------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCcee
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDG----------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 486 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g----------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv 486 (1239)
..+|++.+.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.+++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 358899999999999999999887543 568999887432 334556789999999999999999
Q ss_pred eeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--------
Q 000880 487 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------- 557 (1239)
Q Consensus 487 ~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------- 557 (1239)
+++++|.. ...++++|||++ ++|.+++....
T Consensus 83 ~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 122 (296)
T cd05051 83 RLLGVCTV----------------------------------------DPPLCMIMEYMENGDLNQFLQKHVAETSGLAC 122 (296)
T ss_pred EEEEEEec----------------------------------------CCCcEEEEecCCCCCHHHHHHhcccccccccc
Confidence 99988732 246799999996 68999987655
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 000880 558 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 634 (1239)
Q Consensus 558 ---~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1239)
.+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||+++....... ....
T Consensus 123 ~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~ 189 (296)
T cd05051 123 NSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY-------------YRVQ 189 (296)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcc-------------eeec
Confidence 689999999999999999999999999999999999999999999999999875432110 0112
Q ss_pred cccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc-----CCchhHHHHHHHHhhhh-----cCCCCCccccCCHH
Q 000880 635 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDLKQ-----KGELPPSWVAKFSE 704 (1239)
Q Consensus 635 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~~~~-----~~~~p~~~~~~~~e 704 (1239)
....+|+.|+|||++.+ ..++.++|||||||++|||++ ||............... .....+.....+.+
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (296)
T cd05051 190 GRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKD 268 (296)
T ss_pred CcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHH
Confidence 23457889999999887 568999999999999999985 55544333332222111 01111222344578
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 705 QESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 705 ~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+.++|.+||+.||.+|||+.++++.
T Consensus 269 l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 269 IYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHHHhccChhcCCCHHHHHHH
Confidence 9999999999999999999999764
No 290
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.8e-33 Score=319.57 Aligned_cols=255 Identities=29% Similarity=0.444 Sum_probs=198.9
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCceeeeeeeeeecCccccCC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
|++.+.||.|+||.||+|+++.+++.||+|.++...........+.+|+.+++.+ +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~----- 75 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT----- 75 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC-----
Confidence 6788999999999999999998899999999976544333345677788877666 69999999999854310
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
.....++++|||++++|.+++.... .+++..++.++.||+.||.|||+
T Consensus 76 ------------------------------~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~ 125 (287)
T cd07838 76 ------------------------------DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS 125 (287)
T ss_pred ------------------------------CCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1234589999999999998887643 58999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
++++|+||||+||+++.++.+||+|||++....... ......+++.|+|||++.+ ..++.++|
T Consensus 126 ~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~D 188 (287)
T cd07838 126 HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEM----------------ALTSVVVTLWYRAPEVLLQ-SSYATPVD 188 (287)
T ss_pred CCeeeccCChhhEEEccCCCEEEeccCcceeccCCc----------------ccccccccccccChHHhcc-CCCCCcch
Confidence 999999999999999999999999999987653211 0122357899999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcC----------------CCCC--------ccccCCHHHHHHHHHcc
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELPP--------SWVAKFSEQESLLRRLM 713 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~----------------~~p~--------~~~~~~~e~~~LI~~~L 713 (1239)
+|||||++|||++ ||......+.......... .++. .....++.+.++|.+||
T Consensus 189 i~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 268 (287)
T cd07838 189 MWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKML 268 (287)
T ss_pred hhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHh
Confidence 9999999999996 5654443332222211000 0000 01123456789999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 000880 714 SPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~~~~ 732 (1239)
+.||.+||++.++++|+||
T Consensus 269 ~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 269 TFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccCCccCCCHHHHhcCcCC
Confidence 9999999999999999997
No 291
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2e-33 Score=319.18 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcE----EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.++|++.+.||+|+||+||+|.+..+|.. +++|.+... ........+..|+..++.++||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~----- 79 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP----- 79 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-----
Confidence 36889999999999999999999877764 677766422 22233457888999999999999999998762
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~ 576 (1239)
....+++|||++ |+|.+++... ..+++..++.++.||+.||+
T Consensus 80 ------------------------------------~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~ 123 (279)
T cd05111 80 ------------------------------------GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMY 123 (279)
T ss_pred ------------------------------------CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 123578999996 7999999754 56899999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||++|++||||||+|||++.++.+||+|||+++....... ....+...++..|+|||++.+ ..++
T Consensus 124 ~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~pE~~~~-~~~~ 189 (279)
T cd05111 124 YLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK-------------KYFYSEHKTPIKWMALESILF-GRYT 189 (279)
T ss_pred HHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc-------------ccccCCCCCcccccCHHHhcc-CCcC
Confidence 99999999999999999999999999999999986432110 011123457788999999987 5689
Q ss_pred cchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 657 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
.++|||||||++|||++ ||........ ...+ ..+..++....+..++.+++.+||..||.+|||+.++++.
T Consensus 190 ~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 190 HQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-PDLL-EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHH-HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999999999986 6655433322 2222 2334333333456688999999999999999999999763
No 292
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=8.8e-34 Score=330.07 Aligned_cols=261 Identities=19% Similarity=0.298 Sum_probs=197.8
Q ss_pred eeeccC--CceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
..||+| +||+||++++..+|+.||||++..........+.+.+|+.+++.++||||++++++|..
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------------- 70 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT------------- 70 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-------------
Confidence 456777 99999999999999999999987655554555788999999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
...+|++|||++ ++|.+++... ..+++..+..++.||+.||+|||++||+
T Consensus 71 ---------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 71 ---------------------------GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred ---------------------------CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 356799999997 5899888764 3589999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCcchhhHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 663 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwS 663 (1239)
||||||+|||++.++.++++||+.+............. ........++..|+|||++.+. ..++.++||||
T Consensus 124 HrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws 195 (328)
T cd08226 124 HRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV--------YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYS 195 (328)
T ss_pred cCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc--------ccccccccCccCccChhhhcCCCCCCCchhhHHH
Confidence 99999999999999999999998765432211000000 0001112456789999998763 34789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCCC--------------------------------------------CC
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--------------------------------------------PP 696 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~--------------------------------------------p~ 696 (1239)
|||++|||++ ||............+...... .+
T Consensus 196 lG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (328)
T cd08226 196 VGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTP 275 (328)
T ss_pred HHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccch
Confidence 9999999996 665544333332222211100 01
Q ss_pred ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 000880 697 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 738 (1239)
Q Consensus 697 ~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 738 (1239)
......+.+.+||++||+.||++|||+.++++|+||.+....
T Consensus 276 ~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 276 SSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 111234578899999999999999999999999998776544
No 293
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.7e-33 Score=316.81 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
.++|.+.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--- 80 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST--- 80 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC---
Confidence 46899999999999999999998744 3789999986432 23344578899999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----------CCCCHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 566 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~~~~~~~ 566 (1239)
....|++|||++ ++|.+++... ..+++..++.
T Consensus 81 -------------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05032 81 -------------------------------------GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ 123 (277)
T ss_pred -------------------------------------CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHH
Confidence 245799999996 6999988643 2367889999
Q ss_pred HHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 000880 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 646 (1239)
Q Consensus 567 i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 646 (1239)
++.||+.||.|||+++++||||||+|||++.++.+||+|||+++........ .......+|..|+||
T Consensus 124 ~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05032 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMAP 190 (277)
T ss_pred HHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCccc-------------ccCCCCCccccccCH
Confidence 9999999999999999999999999999999999999999999865322110 011234578899999
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 000880 647 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 722 (1239)
Q Consensus 647 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 722 (1239)
|++.+ ..++.++|||||||++|||++ ||.......... ... ....++.....++++.++|.+||+.+|++|||
T Consensus 191 E~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 267 (277)
T cd05032 191 ESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK-FVI-DGGHLDLPENCPDKLLELMRMCWQYNPKMRPT 267 (277)
T ss_pred HHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH-HHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCC
Confidence 99876 568999999999999999986 665544433332 222 22333333345678999999999999999999
Q ss_pred HHHHHhc
Q 000880 723 ATELLQD 729 (1239)
Q Consensus 723 a~eiL~~ 729 (1239)
+.++++.
T Consensus 268 ~~~l~~~ 274 (277)
T cd05032 268 FLEIVSS 274 (277)
T ss_pred HHHHHHH
Confidence 9999863
No 294
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.2e-33 Score=314.69 Aligned_cols=249 Identities=22% Similarity=0.312 Sum_probs=198.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
++|++.+.||+|+||.||+|.++.+ ...||||+++... .......+.+|+.+++.++||||+++++.+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK------ 76 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec------
Confidence 5799999999999999999999754 4589999886432 33345678999999999999999999987632
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
...+|++|||++ ++|.+++... ..+++..++.++.|++.||+||
T Consensus 77 ----------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L 122 (266)
T cd05033 77 ----------------------------------SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL 122 (266)
T ss_pred ----------------------------------CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999996 5999998764 4689999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|+++|+||||||+|||++.++.++|+|||+++....... ........+++.|+|||.+.+ ..++.+
T Consensus 123 h~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~Pe~~~~-~~~~~~ 188 (266)
T cd05033 123 SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA-------------TYTTKGGKIPIRWTAPEAIAY-RKFTSA 188 (266)
T ss_pred HhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc-------------ceeccCCCCCccccChhhhcc-CCCccc
Confidence 999999999999999999999999999999987631110 001112345788999999887 568999
Q ss_pred hhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 659 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 659 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+||||||+++|+|++ ||............. ....++.....++.+.+++.+||+.+|++||++.+++++
T Consensus 189 ~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 189 SDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVE--DGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred cchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999985 776554444332222 222223334567789999999999999999999999875
No 295
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-34 Score=353.91 Aligned_cols=248 Identities=21% Similarity=0.333 Sum_probs=203.6
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCc-----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGR-----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~-----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
...++.+.||+|+||.||.|....-.. .||||.++ +..+.....+|++|..+|+.++|||||+++|.|++.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~-~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~--- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLK-RLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS--- 767 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecc-ccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC---
Confidence 456778899999999999999864322 48999886 345566778999999999999999999999999653
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-------CCCCHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQ 570 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~~~~~~~i~~q 570 (1239)
...+|++|||. |+|..+|++. ..++....+.++.|
T Consensus 768 -------------------------------------~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~d 810 (1025)
T KOG1095|consen 768 -------------------------------------GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALD 810 (1025)
T ss_pred -------------------------------------CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHH
Confidence 34589999995 7999999865 34888999999999
Q ss_pred HHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 000880 571 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 650 (1239)
Q Consensus 571 I~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 650 (1239)
||.|+.|||++++|||||..+|+||+....|||+|||+|+.+...+..+. +....-...|||||.++
T Consensus 811 vA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~-------------~~~a~lPvkWm~PEsl~ 877 (1025)
T KOG1095|consen 811 VAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRK-------------HGEAMLPVKWMPPESLK 877 (1025)
T ss_pred HhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheec-------------cCccccceecCCHHHHh
Confidence 99999999999999999999999999999999999999995443332211 11112345899999999
Q ss_pred CCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 000880 651 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 726 (1239)
Q Consensus 651 ~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 726 (1239)
. ..++.|+|||||||+|||++| ||....+.++....+. .++ .+.+..++..+.++|..||+.+|++||++..|
T Consensus 878 d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~-ggR-L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i 954 (1025)
T KOG1095|consen 878 D-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE-GGR-LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTI 954 (1025)
T ss_pred h-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh-CCc-cCCCCCCChHHHHHHHHHccCChhhCccHHHH
Confidence 7 689999999999999999996 8888777776654444 343 33445677789999999999999999999999
Q ss_pred Hh
Q 000880 727 LQ 728 (1239)
Q Consensus 727 L~ 728 (1239)
+.
T Consensus 955 ~~ 956 (1025)
T KOG1095|consen 955 VE 956 (1025)
T ss_pred Hh
Confidence 97
No 296
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.1e-33 Score=318.82 Aligned_cols=253 Identities=24% Similarity=0.432 Sum_probs=202.5
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|...+.||.|++|.||++.+..+++.||+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~---------- 87 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLV---------- 87 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEc----------
Confidence 34455799999999999999998999999999864332 334568899999999999999999987732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....|+++||++ ++|.+++.. .++++..++.++.||+.||+|||++|+
T Consensus 88 ------------------------------~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i 136 (285)
T cd06648 88 ------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGV 136 (285)
T ss_pred ------------------------------CCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346799999996 599998877 679999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+||
T Consensus 137 ~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 200 (285)
T cd06648 137 IHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPEVISR-LPYGTEVDIWS 200 (285)
T ss_pred ecCCCChhhEEEcCCCcEEEcccccchhhccCC---------------cccccccCCccccCHHHhcC-CCCCCcccHHH
Confidence 999999999999999999999999887542110 01123468999999999887 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|||++|+|++ ||..........................++.+.++|.+||+.+|.+|||+.++++|+|+.+..
T Consensus 201 lGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 201 LGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred HHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 9999999997 776544433332222211111112223567899999999999999999999999999997654
No 297
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-33 Score=321.62 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=196.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
+.+|++.+.||+|+||.||+|.+..+ ++.||||+++... .......+.+|+.+++.++||||+++++.+..
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--- 79 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK--- 79 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---
Confidence 35688889999999999999998643 5789999987432 33345678899999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----------------CCCC
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 560 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 560 (1239)
...+++++||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05091 80 -------------------------------------EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE 122 (283)
T ss_pred -------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccC
Confidence 345789999996 5888887532 2478
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 000880 561 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 640 (1239)
Q Consensus 561 ~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 640 (1239)
+..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++........ .......++
T Consensus 123 ~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~ 189 (283)
T cd05091 123 PADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYY-------------KLMGNSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchhe-------------eeccCccCC
Confidence 8889999999999999999999999999999999999999999999998864322100 011223567
Q ss_pred ccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 000880 641 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 716 (1239)
Q Consensus 641 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~d 716 (1239)
+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+.. ...++.....++.+.+|+.+||+.+
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05091 190 IRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN--RQVLPCPDDCPAWVYTLMLECWNEF 266 (283)
T ss_pred ccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHhCCC
Confidence 89999999876 568999999999999999986 6665554444333222 2223333456678999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000880 717 PSDRPSATELLQD 729 (1239)
Q Consensus 717 P~~RPta~eiL~~ 729 (1239)
|.+||++.+|++.
T Consensus 267 p~~RP~~~~i~~~ 279 (283)
T cd05091 267 PSRRPRFKDIHSR 279 (283)
T ss_pred cccCCCHHHHHHH
Confidence 9999999999874
No 298
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-33 Score=331.05 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~ 497 (1239)
++|++.+.||+|+||.||+|.+. .+++.||||+++... .......+.+|+.+|..+ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC--
Confidence 57899999999999999999853 467899999997433 233456788999999999 789999999887432
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--------------------
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 556 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 556 (1239)
...++++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (343)
T cd05103 84 -------------------------------------GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSG 126 (343)
T ss_pred -------------------------------------CCceEEEEeccCCCcHHHHHHhcCCcccccccccccccccccc
Confidence 345789999996 6899888642
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 000880 557 -----------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 589 (1239)
Q Consensus 557 -----------------------------------------------~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLK 589 (1239)
..++...+..++.||+.||+|||++||+|||||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik 206 (343)
T cd05103 127 YGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLA 206 (343)
T ss_pred ccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCc
Confidence 136778888999999999999999999999999
Q ss_pred cccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHH
Q 000880 590 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 669 (1239)
Q Consensus 590 p~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 669 (1239)
|+|||++.++.+||+|||+++....... ........+++.|+|||++.+ ..++.++|||||||++|
T Consensus 207 p~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ 272 (343)
T cd05103 207 ARNILLSENNVVKICDFGLARDIYKDPD-------------YVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 272 (343)
T ss_pred cCeEEEcCCCcEEEEecccccccccCcc-------------hhhcCCCCCCcceECcHHhcC-CCCCchhhHHHHHHHHH
Confidence 9999999999999999999976421110 001122346778999999877 56899999999999999
Q ss_pred Hhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 670 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 670 ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+|++ ||............+. .+..++.....++++.+++.+||+.||.+|||+.+|++|
T Consensus 273 el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 273 EIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHCCCCCCCCccccHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9985 6654332222222222 222222222345789999999999999999999999986
No 299
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.2e-33 Score=310.28 Aligned_cols=250 Identities=34% Similarity=0.582 Sum_probs=206.7
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||.|+||.||++.+..+++.||+|++............+.+|+.+++.++|||++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~---------- 70 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE---------- 70 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec----------
Confidence 5888999999999999999999999999999998665554566789999999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....+++|||+++ +|.+.+... ..+++..++.++.||+.||.|||
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh 120 (258)
T cd08215 71 ------------------------------KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120 (258)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999974 899988764 67999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++|+||+|+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++
T Consensus 121 ~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (258)
T cd08215 121 SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV---------------DLAKTVVGTPYYLSPELCQN-KPYNYKS 184 (258)
T ss_pred hCCEecccCChHHeEEcCCCcEEECCccceeecccCc---------------ceecceeeeecccChhHhcc-CCCCccc
Confidence 9999999999999999999999999999997643221 01123478999999999887 4588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
|+||+|+++|+|++ ||.............. ...++.....+..+.+++.+||..+|++|||+.++++||||
T Consensus 185 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 185 DIWSLGCVLYELCTLKHPFEGENLLELALKILK--GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred cHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999996 6655443333333222 22233333556789999999999999999999999999996
No 300
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.9e-33 Score=323.57 Aligned_cols=247 Identities=24% Similarity=0.361 Sum_probs=193.4
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcE--EEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~--vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~ 499 (1239)
.++|++.+.||+|+||.||+|.++.++.. +|+|.++. ..+......+.+|+.++.++ +||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~----- 79 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----- 79 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc-cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-----
Confidence 47899999999999999999999878765 46666542 22334456788999999999 89999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC----------------CCCHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKE 562 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~~~ 562 (1239)
...+|++|||++ ++|.+++.... .+++.
T Consensus 80 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (303)
T cd05088 80 -----------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 124 (303)
T ss_pred -----------------------------------CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHH
Confidence 346799999996 69999986532 47899
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 000880 563 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 642 (1239)
Q Consensus 563 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 642 (1239)
.++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++...... .......+++.
T Consensus 125 ~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~ 188 (303)
T cd05088 125 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVR 188 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh----------------hhcccCCCccc
Confidence 99999999999999999999999999999999999999999999998632100 00112235678
Q ss_pred CCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 000880 643 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 718 (1239)
Q Consensus 643 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 718 (1239)
|+|||++.+ ..++.++|||||||++|||++ ||......+.... .. ....+......++++.+||.+||+.+|+
T Consensus 189 y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 265 (303)
T cd05088 189 WMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LP-QGYRLEKPLNCDDEVYDLMRQCWREKPY 265 (303)
T ss_pred ccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH-Hh-cCCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 999999877 558999999999999999985 6654433333222 21 1222223334567899999999999999
Q ss_pred CCCCHHHHHhc
Q 000880 719 DRPSATELLQD 729 (1239)
Q Consensus 719 ~RPta~eiL~~ 729 (1239)
+||++.+++++
T Consensus 266 ~Rp~~~~il~~ 276 (303)
T cd05088 266 ERPSFAQILVS 276 (303)
T ss_pred hCcCHHHHHHH
Confidence 99999999976
No 301
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.8e-33 Score=313.79 Aligned_cols=245 Identities=22% Similarity=0.388 Sum_probs=194.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||+|+||.||+|.+. .+..+|||.+..... ....+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTK--------- 70 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEcc---------
Confidence 57899999999999999999886 455799998864332 23568999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|++|||+. ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05113 71 -------------------------------QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK 119 (256)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 235699999996 5899988764 4689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++|+||||+|||++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++||
T Consensus 120 ~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di 184 (256)
T cd05113 120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--------------TSSVGSKFPVRWSPPEVLLY-SKFSSKSDV 184 (256)
T ss_pred CeeccccCcceEEEcCCCCEEECCCccceecCCCce--------------eecCCCccChhhCCHHHHhc-CcccchhHH
Confidence 999999999999999999999999999875422110 01122346678999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 662 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 662 wSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|||||++|+|++ ||.............. ...+......++.+.+++.+||+.||.+||++.+++.+
T Consensus 185 ~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 185 WAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ--GLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 999999999986 6654444333333322 22222223345789999999999999999999999864
No 302
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.6e-33 Score=318.11 Aligned_cols=246 Identities=21% Similarity=0.353 Sum_probs=193.5
Q ss_pred ccCCceEEeee--ccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCcc
Q 000880 422 YLNDFEELQPL--GHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 422 ~~~~y~~~~~L--G~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~ 498 (1239)
+.++|++.+.+ |.|+||.||++.++.++..+|+|.+....... .|+.....+ +||||++++++|..
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~---- 80 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTT---- 80 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEec----
Confidence 34566666666 99999999999999999999999987543221 122222222 79999999988743
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
...+|+||||++ ++|.+++.....+++..++.++.||+.||.|
T Consensus 81 ------------------------------------~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~ 124 (267)
T PHA03390 81 ------------------------------------LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALND 124 (267)
T ss_pred ------------------------------------CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 347899999996 6999999887789999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 578 IHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
||+.|++||||||+||+++.++ .++|+|||++..... .....||+.|+|||++.+ ..++
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~-~~~~ 184 (267)
T PHA03390 125 LHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT-------------------PSCYDGTLDYFSPEKIKG-HNYD 184 (267)
T ss_pred HHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-------------------CccCCCCCcccChhhhcC-CCCC
Confidence 9999999999999999999998 999999999875421 122468899999999987 5689
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc-CCCCCccccCCHHHHHHHHHccCCCCCCCCC-HHHHHhccC
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GELPPSWVAKFSEQESLLRRLMSPSPSDRPS-ATELLQDAL 731 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-a~eiL~~~~ 731 (1239)
.++|||||||++|+|++ ||............+... ...++.+...++.+.++|.+||+.||.+||+ ++++|+|+|
T Consensus 185 ~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~ 264 (267)
T PHA03390 185 VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPF 264 (267)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCc
Confidence 99999999999999996 776433222111111111 1222333456789999999999999999996 699999999
Q ss_pred CCC
Q 000880 732 PPQ 734 (1239)
Q Consensus 732 ~~~ 734 (1239)
|.+
T Consensus 265 ~~~ 267 (267)
T PHA03390 265 LKI 267 (267)
T ss_pred ccC
Confidence 864
No 303
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.8e-33 Score=315.44 Aligned_cols=248 Identities=27% Similarity=0.434 Sum_probs=196.6
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHH-HhcCCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATL-SRLQHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL-~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||.|+||.||+|.+..+|+.||||+++..... ......+..|..++ ..++||||++++++|..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 68 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS------------- 68 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-------------
Confidence 5699999999999999999999999998644321 12223445555444 45589999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||+++++||
T Consensus 69 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~ 121 (260)
T cd05611 69 ---------------------------KDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121 (260)
T ss_pred ---------------------------CCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 357899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||+|+||+++.++.+||+|||++..... .....|++.|+|||.+.+ ..++.++||||||+
T Consensus 122 dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~ 181 (260)
T cd05611 122 DIKPENLLIDQTGHLKLTDFGLSRNGLE-------------------NKKFVGTPDYLAPETILG-VGDDKMSDWWSLGC 181 (260)
T ss_pred CCCHHHeEECCCCcEEEeecccceeccc-------------------cccCCCCcCccChhhhcC-CCCcchhhhHHHHH
Confidence 9999999999999999999999875321 123468899999999987 45899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHhhhhcCCCCCc-cccCCHHHHHHHHHccCCCCCCCCC---HHHHHhccCCCCchH
Q 000880 667 VFFELWH---PFSTAMERQIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPS---ATELLQDALPPQMEY 737 (1239)
Q Consensus 667 iL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~-~~~~~~e~~~LI~~~L~~dP~~RPt---a~eiL~~~~~~~~~~ 737 (1239)
++|+|++ ||...................+.. ....++++.++|.+||+.||++||+ +.+++.|||+....|
T Consensus 182 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 182 VIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 9999996 776555444333322222222322 2245678999999999999999995 579999999987654
No 304
>PRK14799 thrS threonyl-tRNA synthetase; Provisional
Probab=100.00 E-value=2.2e-33 Score=339.27 Aligned_cols=358 Identities=15% Similarity=0.154 Sum_probs=264.2
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ec--cCCCccccccEEEEeccCCCeeeecCCCcHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLP 855 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~ 855 (1239)
....|+++|+|.++.+++.+++.+++.+.++||++|.||.+ ++ .++.+...++||.+ |.+|+.++|||+.|++
T Consensus 155 ~~~~G~~~~lP~G~~i~~~L~~~~r~~~~~~Gy~eV~TP~i~~~eL~k~SGh~~~y~~~mf~~-~~~~e~~~LrPm~cp~ 233 (545)
T PRK14799 155 EAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVF-NMEGDEYGVKPMNCPA 233 (545)
T ss_pred ccCCcceEEcChHHHHHHHHHHHHHHHHHHcCCeEEECCccchHHHHhhccccccchhhccee-eccCceEEeccCCCHH
Confidence 35689999999999999999999999999999999999999 22 23345588999988 8889999999999999
Q ss_pred HHHHHHhCC----CCceeEEeecCeEEcCCCCC-----CCCceeEEeEEEeCCCCcc-cHH-HHHHHHHHHHHhcCCC-C
Q 000880 856 FIRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASAL-TEA-EVLKVTMDIVTRFFHA-E 923 (1239)
Q Consensus 856 iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~~-----~~~ef~Q~GvEiiG~~s~~-aDa-Evi~la~~~l~~lgi~-~ 923 (1239)
++|+++++. ..|+|+|++|+|||+|.++. |.|+|+|+|+++||..++. +|+ |++.++.++++.||++ .
T Consensus 234 ~~~~~~~~~~SyrdLPlR~~e~g~vfR~E~sg~l~GL~RvReF~Q~DaHif~~~~q~~~E~~~~l~~i~~vy~~fG~~~~ 313 (545)
T PRK14799 234 HILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDD 313 (545)
T ss_pred HHHHHhccccChhhCCHhhEEecceecCCCCCCccccccceeEEEcccEEEeCHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999988742 45999999999999998874 5667999999999999875 888 9999999999999996 2
Q ss_pred ceEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcC
Q 000880 924 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 1003 (1239)
Q Consensus 924 ~~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g 1003 (1239)
++.+.++++. .+.+|.++.|.+....+ ++.+.+.+++....+...+|+ |
T Consensus 314 ~~~i~ls~Rp-----e~~~G~~~~wdka~~~l----------------------~~~L~~~gl~~~~~~g~gafy----g 362 (545)
T PRK14799 314 DIKPYLSTRP-----DESIGSDELWEKATNAL----------------------ISALQESGLKFGIKEKEGAFY----G 362 (545)
T ss_pred cEEEEEEcCh-----hhhcCCHHHHHHHHHHH----------------------HHHHHHcCCCeEEecceeccc----c
Confidence 4999999975 34567655433222111 222333444443333333332 2
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccccc
Q 000880 1004 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1083 (1239)
Q Consensus 1004 ~~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRY 1083 (1239)
+.. +-.+..++.+. ... ..+.+|+.+.+.++ + +.+..+ + .
T Consensus 363 pki------------D~~v~dalgr~-~q~----~Tiqldf~lp~rf~----L--ey~~~~-~--------------~-- 402 (545)
T PRK14799 363 PKI------------DFEIRDSLGRW-WQL----STIQVDFNLPERFK----L--EYIDKD-G--------------I-- 402 (545)
T ss_pred Ccc------------ceEehhhcCch-hhh----hhhhhhcCcccccc----e--EEEcCC-C--------------C--
Confidence 110 01111222221 000 11234555444443 1 211111 0 0
Q ss_pred cchhhhccccccccccCCCCCC-ceeeeeccHHHHHhhCC---CCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHHH
Q 000880 1084 DYLLHRMWDREYVGYASRTNPP-SGVGASLALETIIQHYP---VDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1159 (1239)
Q Consensus 1084 D~L~~~fg~~~~~~~~g~~~~~-pAvGfaigldrl~~~L~---~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr~ 1159 (1239)
...++ ...|+..|+|||+.+|. .+..|.+ .++.+|+|++.+ +.....|.++++.||+
T Consensus 403 -----------------~~~pv~ihr~~~GgiERli~iL~e~~~G~~P~w-laP~qV~Iipi~-e~~~~~A~~Ia~~LR~ 463 (545)
T PRK14799 403 -----------------KKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTW-LSSVQVRVLPIT-DEVNEYAEKVLNDMRK 463 (545)
T ss_pred -----------------CcccEEEEccCCCCHHHHHHHHHHHcCCCCCCC-CCCceEEEEEcC-HHHHHHHHHHHHHHHh
Confidence 00111 12267779999998884 2444443 357899999996 6678899999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHhh
Q 000880 1160 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1231 (1239)
Q Consensus 1160 ~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~~ 1231 (1239)
+|++|+++.. ++++++++++|++.|++++||||++|+++++|+||++.+++|.+++++++++.+.+.+.+.
T Consensus 464 ~GirVelD~~-~~~lgkkir~A~k~gip~viIIG~~E~e~~~VtVR~r~~~eq~~v~l~eli~~l~~~i~~~ 534 (545)
T PRK14799 464 RRIRAEIDYA-GETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQR 534 (545)
T ss_pred CCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEChhHhhcCeEEEEECCCCceEEEcHHHHHHHHHHHHhhc
Confidence 9999998876 6799999999999999999999999999999999999999999999999999998887654
No 305
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.2e-33 Score=322.79 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=203.5
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..|+..+.||+|+||.||++++..+|..||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 96 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-------- 96 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--------
Confidence 457788999999999999999999999999999875432 33345678899999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....|+||||++|+|.+++.. ...+++..+..++.||+.||.|||++
T Consensus 97 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~ 144 (317)
T cd06635 97 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH 144 (317)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999999988887754 45689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCcch
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 659 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 659 (1239)
|++||||+|+||+++.++.+||+|||++..... .....|++.|+|||++.+ ...++.++
T Consensus 145 ~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 205 (317)
T cd06635 145 NMIHRDIKAGNILLTEPGQVKLADFGSASIASP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 205 (317)
T ss_pred CcccCCCCcccEEECCCCCEEEecCCCccccCC-------------------cccccCCccccChhhhhcCCCCCCCccc
Confidence 999999999999999999999999999864321 123468899999998742 24588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
|||||||++|||++ ||.............. ....+......++.+.++|.+||+.+|.+||++.++++|+|+...
T Consensus 206 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred cHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh-ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 99999999999996 6665544433333322 222222233455689999999999999999999999999987543
No 306
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.8e-33 Score=316.57 Aligned_cols=265 Identities=28% Similarity=0.436 Sum_probs=208.7
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~ 501 (1239)
++|.+.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++ ||||+++++++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-------- 72 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-------- 72 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc--------
Confidence 478999999999999999999999999999999875332 2334467889999999998 999999987762
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
....+|++|||+ +++|.+++.....+++..++.++.||+.||.|||+
T Consensus 73 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~ 120 (280)
T cd05581 73 --------------------------------DEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS 120 (280)
T ss_pred --------------------------------CCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 235689999999 57999999988889999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCC-----CCCCCCccccCcccccCccCCCcccccCCCCC
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF-----PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 655 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 655 (1239)
+|++|+||||+||+++.++.++|+|||++.............. ...............|+..|+|||++.+ ..+
T Consensus 121 ~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~ 199 (280)
T cd05581 121 KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPA 199 (280)
T ss_pred CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC-CCC
Confidence 9999999999999999999999999999987643321110000 0000000112234578999999999887 568
Q ss_pred CcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHh
Q 000880 656 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQ 728 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~ 728 (1239)
+.++|+||||+++|++++ ||...................|. ..++.+.++|.+||+.+|.+||++ .++++
T Consensus 200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 200 GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP---NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCC---ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 899999999999999997 66655443333333322223333 335689999999999999999999 99999
Q ss_pred ccCC
Q 000880 729 DALP 732 (1239)
Q Consensus 729 ~~~~ 732 (1239)
|+||
T Consensus 277 ~~~~ 280 (280)
T cd05581 277 HPFF 280 (280)
T ss_pred CCCC
Confidence 9997
No 307
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=5.4e-33 Score=309.25 Aligned_cols=250 Identities=29% Similarity=0.459 Sum_probs=208.4
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||+|++|.||++.+..+++.||+|.+............+.+|+.+++.++|||++++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET---------- 70 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe----------
Confidence 4788999999999999999999899999999997665444556789999999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....|++|||++ ++|.+++.....+++..++.++.|++.||.|||++||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i 120 (254)
T cd06627 71 ------------------------------SDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV 120 (254)
T ss_pred ------------------------------CCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 356899999997 4999999888889999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++||||
T Consensus 121 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~~ 184 (254)
T cd06627 121 IHRDIKAANILTTKDGVVKLADFGVATKLNDVSK---------------DDASVVGTPYWMAPEVIEM-SGASTASDIWS 184 (254)
T ss_pred ccCCCCHHHEEECCCCCEEEeccccceecCCCcc---------------cccccccchhhcCHhhhcC-CCCCcchhHHH
Confidence 9999999999999999999999999986532210 0123468899999999887 44889999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+|+++|+|++ ||............. ....+......++.+.++|.+||..+|++|||+.+++.|+||
T Consensus 185 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 185 LGCTVIELLTGNPPYYDLNPMAALFRIV--QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHHh--ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 9999999997 776555444333332 223333334556789999999999999999999999999986
No 308
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.4e-33 Score=320.36 Aligned_cols=250 Identities=22% Similarity=0.341 Sum_probs=197.0
Q ss_pred cCCceEEeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 496 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~ 496 (1239)
.++|++.+.||+|+||.||++.++.. ...+|+|.+... ........+.+|+.+++.+ +||||+++++.+..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC-CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 36789999999999999999998744 378999988743 2333456788999999999 89999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----------------cCCC
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----------------YDHF 559 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----------------~~~l 559 (1239)
...+|++|||++ ++|..++.. ...+
T Consensus 88 --------------------------------------~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l 129 (293)
T cd05053 88 --------------------------------------EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETL 129 (293)
T ss_pred --------------------------------------CCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccccccccc
Confidence 245799999996 699998854 2458
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 000880 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 639 (1239)
Q Consensus 560 ~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 639 (1239)
++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.+...... .......+
T Consensus 130 ~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~~ 196 (293)
T cd05053 130 TQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY-------------RKTTNGRL 196 (293)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce-------------eccCCCCC
Confidence 89999999999999999999999999999999999999999999999999865322110 01122345
Q ss_pred CccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCC
Q 000880 640 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 715 (1239)
Q Consensus 640 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~ 715 (1239)
+..|+|||++.+ ..++.++|||||||++|||++ ||......+.. .... ....+......++++.+|+.+||..
T Consensus 197 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~ 273 (293)
T cd05053 197 PVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-KLLK-EGYRMEKPQNCTQELYHLMRDCWHE 273 (293)
T ss_pred CccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-HHHH-cCCcCCCCCCCCHHHHHHHHHHccc
Confidence 678999999877 568999999999999999985 66544333322 2222 2223333445667899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000880 716 SPSDRPSATELLQD 729 (1239)
Q Consensus 716 dP~~RPta~eiL~~ 729 (1239)
||.+|||+.+++++
T Consensus 274 ~p~~Rps~~eil~~ 287 (293)
T cd05053 274 VPSQRPTFKQLVED 287 (293)
T ss_pred CcccCcCHHHHHHH
Confidence 99999999999975
No 309
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.5e-33 Score=319.03 Aligned_cols=258 Identities=28% Similarity=0.419 Sum_probs=202.4
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
.++|++.+.||+|+||.||+|.+..+++.||||.++..... .....+.+|+.++..+ .||||++++++|..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------- 85 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFIT------- 85 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeec-------
Confidence 57899999999999999999999988999999999754332 3345677788777676 49999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|++|||+++++.+++.. ...+++..+..++.||+.||+|||+
T Consensus 86 ---------------------------------~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~ 132 (296)
T cd06618 86 ---------------------------------DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE 132 (296)
T ss_pred ---------------------------------CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999999888877765 4568999999999999999999997
Q ss_pred -CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CCCC
Q 000880 581 -QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PKID 656 (1239)
Q Consensus 581 -~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~~ 656 (1239)
+||+||||+|+||+++.++.+||+|||++..+.... ......+++.|+|||.+.+. +.++
T Consensus 133 ~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 196 (296)
T cd06618 133 KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK----------------AKTRSAGCAAYMAPERIDPPDPNPKYD 196 (296)
T ss_pred hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC----------------cccCCCCCccccCHhhcCCCCCccccc
Confidence 599999999999999999999999999987643211 01223578899999998763 2378
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHH-HHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
.++||||||+++|+|++ ||...... +.............+.....+.++.+||.+||+.||.+||++.++++|+|+
T Consensus 197 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 197 IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 89999999999999997 76543222 222222222211112222356789999999999999999999999999998
Q ss_pred CCchH
Q 000880 733 PQMEY 737 (1239)
Q Consensus 733 ~~~~~ 737 (1239)
.....
T Consensus 277 ~~~~~ 281 (296)
T cd06618 277 RRYET 281 (296)
T ss_pred hccch
Confidence 86543
No 310
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.5e-33 Score=317.51 Aligned_cols=252 Identities=26% Similarity=0.362 Sum_probs=191.7
Q ss_pred CCc-eEEeeeccCCceEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDF-EELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y-~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
++| ++++.||+|+||+||++.. ..++..||+|.++... .......+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 78 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ--- 78 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence 344 8889999999999988753 3568899999987442 223456788999999999999999999887432
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....+|++|||++ ++|.+++.. ..+++..++.++.|++.||.|
T Consensus 79 -----------------------------------~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~ 122 (283)
T cd05080 79 -----------------------------------GGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAY 122 (283)
T ss_pred -----------------------------------CCceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 2346899999997 589888865 459999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++||+||||||+|||++.++.+||+|||+++........ ........++..|+|||++.+ ..++.
T Consensus 123 lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~PE~~~~-~~~~~ 189 (283)
T cd05080 123 LHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY------------YRVREDGDSPVFWYAVECLKE-NKFSY 189 (283)
T ss_pred HHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh------------hccCCCCCCCceeeCHhHhcc-cCCCc
Confidence 99999999999999999999999999999999865321100 000122346678999999887 56899
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHH-H------------HHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQ-I------------VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 721 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~-~------------~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 721 (1239)
++|||||||++|||++ ||....... . ...........++.....+.++.+++.+||+.||++||
T Consensus 190 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 269 (283)
T cd05080 190 ASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRP 269 (283)
T ss_pred ccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCC
Confidence 9999999999999997 553221110 0 00001111122222334567899999999999999999
Q ss_pred CHHHHHh
Q 000880 722 SATELLQ 728 (1239)
Q Consensus 722 ta~eiL~ 728 (1239)
|+.++++
T Consensus 270 s~~~i~~ 276 (283)
T cd05080 270 TFRSLIP 276 (283)
T ss_pred CHHHHHH
Confidence 9999986
No 311
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.9e-33 Score=322.00 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=203.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||.|+||.||++.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++.|..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------- 87 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV-------- 87 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeee--------
Confidence 4789999999999999999999988999999999864332 234678999999999999999999987732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....|+|+||++ ++|.+++.+ ..+++..+..++.|++.||.|||++
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~ 134 (293)
T cd06647 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN 134 (293)
T ss_pred --------------------------------CCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 346799999996 589888865 3588999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+
T Consensus 135 gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv 198 (293)
T cd06647 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (293)
T ss_pred CEeeccCCHHHEEEcCCCCEEEccCcceecccccc---------------cccccccCChhhcCchhhcc-CCCCchhhH
Confidence 99999999999999999999999999987543211 01123468999999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 662 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 662 wSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|||||++|+|++ ||..........................+..+.++|.+||..+|.+||++.+++.|+||....
T Consensus 199 ~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 999999999996 776544333222111111111112233456789999999999999999999999999997654
No 312
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.3e-33 Score=316.88 Aligned_cols=249 Identities=21% Similarity=0.306 Sum_probs=195.4
Q ss_pred CCceEEeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
++|.+.+.||+|+||.||+|.+.. ++..||+|.++.. ........+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---- 80 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE---- 80 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc----
Confidence 678999999999999999999987 6788999987633 223334578999999999999999999988743
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-------CCCHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFRQ 570 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~~~~~~~i~~q 570 (1239)
....|++|||++ ++|.+++.... .+++..++.++.|
T Consensus 81 ------------------------------------~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~q 124 (277)
T cd05036 81 ------------------------------------RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARD 124 (277)
T ss_pred ------------------------------------CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Confidence 234689999995 69999987543 4889999999999
Q ss_pred HHHHHHHHHhCCccccCCCcccEEEcCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 000880 571 IVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 647 (1239)
Q Consensus 571 I~~gL~yLHs~gIiHrDLKp~NILl~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 647 (1239)
|+.||+|||+++++||||||+|||++.++ .+||+|||+++........ .......+++.|+|||
T Consensus 125 i~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE 191 (277)
T cd05036 125 VAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY-------------RKGGRAMLPIKWMPPE 191 (277)
T ss_pred HHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccce-------------ecCCCCCccHhhCCHH
Confidence 99999999999999999999999998764 5999999999865211100 0011223457899999
Q ss_pred cccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH
Q 000880 648 IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 723 (1239)
Q Consensus 648 ~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta 723 (1239)
++.+ ..++.++|||||||++|||++ ||.............. ...+......++.+.+++.+||+.+|++|||+
T Consensus 192 ~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~ 268 (277)
T cd05036 192 AFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG--GGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNF 268 (277)
T ss_pred HHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 9987 569999999999999999985 7765544333322221 11222234456789999999999999999999
Q ss_pred HHHHhc
Q 000880 724 TELLQD 729 (1239)
Q Consensus 724 ~eiL~~ 729 (1239)
.++++|
T Consensus 269 ~~vl~~ 274 (277)
T cd05036 269 ATILER 274 (277)
T ss_pred HHHHHH
Confidence 999987
No 313
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.5e-33 Score=318.68 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=195.9
Q ss_pred CCceEEeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.+|.+.+.||+|+||+||++.+. .++..||+|.+... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE---- 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 57899999999999999999863 34567999987632 33445679999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-------------CCCHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------------HFDKELA 564 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------------~l~~~~~ 564 (1239)
...+|++|||++ ++|.+++.... .+++..+
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 122 (288)
T cd05093 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQM 122 (288)
T ss_pred ------------------------------------CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHH
Confidence 346799999996 69999886443 3899999
Q ss_pred HHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCC
Q 000880 565 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 644 (1239)
Q Consensus 565 ~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 644 (1239)
+.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........+++.|+
T Consensus 123 ~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~ 189 (288)
T cd05093 123 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPIRWM 189 (288)
T ss_pred HHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCce-------------eecCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999975421110 01112345678999
Q ss_pred CcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 000880 645 APEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 720 (1239)
Q Consensus 645 APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 720 (1239)
|||++.+ ..++.++|||||||++|+|++ ||.............. +..+......++++.+|+.+||+.||.+|
T Consensus 190 aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~R 266 (288)
T cd05093 190 PPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ--GRVLQRPRTCPKEVYDLMLGCWQREPHMR 266 (288)
T ss_pred CHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999987 568999999999999999986 5655444443333322 22233333456789999999999999999
Q ss_pred CCHHHHHh
Q 000880 721 PSATELLQ 728 (1239)
Q Consensus 721 Pta~eiL~ 728 (1239)
||+.+++.
T Consensus 267 pt~~~v~~ 274 (288)
T cd05093 267 LNIKEIHS 274 (288)
T ss_pred CCHHHHHH
Confidence 99999975
No 314
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=330.49 Aligned_cols=247 Identities=31% Similarity=0.487 Sum_probs=188.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|.....||+|+||.||+|... +|..||||.+....... ..+|.+|+.+|.+++|||+|+++|+|.+.+
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~------- 144 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGG------- 144 (361)
T ss_pred hCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCC-------
Confidence 67777789999999999999987 55999999776433321 455999999999999999999999996531
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...++|+||++ |+|.++|+... .++|....+|+.++|.||+|||.
T Consensus 145 --------------------------------~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~ 192 (361)
T KOG1187|consen 145 --------------------------------EHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHE 192 (361)
T ss_pred --------------------------------ceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHcc
Confidence 15789999996 79999998655 89999999999999999999998
Q ss_pred CC---ccccCCCcccEEEcCCCCEEEeecCcchhccc-cccccCCCCCCCCCCccccCccc-ccCccCCCcccccCCCCC
Q 000880 581 QG---IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAAFPTDTGGVSVDGTGQ-VGTYFYTAPEIEQGWPKI 655 (1239)
Q Consensus 581 ~g---IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~~ 655 (1239)
.. ||||||||+|||||.++++||+|||+|+.... .. ..... .||.+|+|||++.. +..
T Consensus 193 ~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~----------------~~~~~~~gt~gY~~PEy~~~-g~l 255 (361)
T KOG1187|consen 193 GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT----------------SVSTTVMGTFGYLAPEYAST-GKL 255 (361)
T ss_pred CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcccc----------------ceeeecCCCCccCChhhhcc-CCc
Confidence 54 99999999999999999999999999965321 10 00111 79999999999987 679
Q ss_pred CcchhhHHHHHHHHHhhc---CCchhH---HH--HHHHHhhhhcCC----CCCcc--cc-----CCHHHHHHHHHccCCC
Q 000880 656 DEKADMYSLGIVFFELWH---PFSTAM---ER--QIVLSDLKQKGE----LPPSW--VA-----KFSEQESLLRRLMSPS 716 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt---Pf~~~~---~~--~~~~~~~~~~~~----~p~~~--~~-----~~~e~~~LI~~~L~~d 716 (1239)
+.|+|||||||+|.||+| |..... .. ..........+. +.+.. .. ....+..+..+|++.+
T Consensus 256 t~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~ 335 (361)
T KOG1187|consen 256 TEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPD 335 (361)
T ss_pred CcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcC
Confidence 999999999999999997 222111 10 111011111111 11111 11 1123567888999999
Q ss_pred CCCCCCHHHHHhc
Q 000880 717 PSDRPSATELLQD 729 (1239)
Q Consensus 717 P~~RPta~eiL~~ 729 (1239)
|.+||++.++++.
T Consensus 336 ~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 336 PKERPTMSQVVKE 348 (361)
T ss_pred CCcCcCHHHHHHH
Confidence 9999999998653
No 315
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.7e-34 Score=321.46 Aligned_cols=252 Identities=28% Similarity=0.439 Sum_probs=201.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
+.|+.++.||+|+||.||+|.+..++..||+|.++.... ......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLK--------- 73 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhccccc---------
Confidence 346777899999999999999998999999999874432 2345678999999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|+||||++ ++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 74 -------------------------------GTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred -------------------------------CCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 356799999997 588888754 56899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++|+||+|+||+++.++.++|+|||++..+.... .......|+..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 185 (277)
T cd06642 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDFKADIW 185 (277)
T ss_pred eeccCCChheEEEeCCCCEEEccccccccccCcc---------------hhhhcccCcccccCHHHhCc-CCCchhhhHH
Confidence 9999999999999999999999999987643211 01123468899999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
||||++|||++ ||............ . ....+......+.++.++|.+||+.+|++||++.++++|+|+...
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 186 SLGITAIELAKGEPPNSDLHPMRVLFLI-P-KNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHHHHHHHhCCCCCcccchhhHHhhh-h-cCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 99999999997 55433332222211 1 112222222345688999999999999999999999999987644
No 316
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.1e-33 Score=312.77 Aligned_cols=245 Identities=24% Similarity=0.350 Sum_probs=195.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|+++++||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTK-------- 72 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcC--------
Confidence 478999999999999999999975 667899998764322 35678999999999999999999987632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....|++|||++ ++|.+++... ..++...++.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH 120 (261)
T cd05072 73 --------------------------------EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 120 (261)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 6999988653 45888999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+++++||||||+||+++.++.++|+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 121 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 185 (261)
T cd05072 121 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 185 (261)
T ss_pred HCCeeccccchhhEEecCCCcEEECCCccceecCCCce--------------eccCCCccceecCCHHHhcc-CCCChhh
Confidence 99999999999999999999999999999986432110 01122346778999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
|||||||++|+|++ ||............ . .....+.....+.++.+++.+||..+|++||+++++++
T Consensus 186 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 186 DVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL-Q-RGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred hhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999996 66554443333222 2 12222333456678999999999999999999999875
No 317
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.9e-33 Score=317.34 Aligned_cols=248 Identities=29% Similarity=0.408 Sum_probs=197.6
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCc
Q 000880 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 510 (1239)
Q Consensus 432 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~ 510 (1239)
||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+|+.++||||+++++.+..
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------------- 64 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET---------------- 64 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec----------------
Confidence 69999999999999999999999998754322 2234456789999999999999999987732
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 511 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 511 ~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
...+|+||||++ ++|.+++.... .+++..++.++.|++.||.|||++|++|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 120 (277)
T cd05577 65 ------------------------KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120 (277)
T ss_pred ------------------------CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 356799999997 59999887655 699999999999999999999999999999
Q ss_pred CCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHH
Q 000880 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 667 (1239)
Q Consensus 588 LKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 667 (1239)
|+|+||+++.++.+||+|||++....... ......++..|+|||++.+ ..++.++|||||||+
T Consensus 121 i~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 183 (277)
T cd05577 121 LKPENVLLDDHGNVRISDLGLAVELKGGK----------------KIKGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCT 183 (277)
T ss_pred CCHHHEEECCCCCEEEccCcchhhhccCC----------------ccccccCCCCcCCHHHhcC-CCCCchhhhHHHHHH
Confidence 99999999999999999999987643210 1123468889999999887 458999999999999
Q ss_pred HHHhhc---CCchhHH---HHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCch
Q 000880 668 FFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQME 736 (1239)
Q Consensus 668 L~ELlt---Pf~~~~~---~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~ 736 (1239)
+|+|++ ||..... ......... ..........++++.++|.+||+.||.+|| ++.++++|||+....
T Consensus 184 l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 184 LYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred HHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 999996 7754322 111111111 111112223467899999999999999999 899999999998876
Q ss_pred HH
Q 000880 737 YE 738 (1239)
Q Consensus 737 ~~ 738 (1239)
+.
T Consensus 262 ~~ 263 (277)
T cd05577 262 WR 263 (277)
T ss_pred hh
Confidence 54
No 318
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.5e-33 Score=320.94 Aligned_cols=250 Identities=22% Similarity=0.302 Sum_probs=193.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCC--------------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeee
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDG--------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 489 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g--------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~ 489 (1239)
++|++.++||+|+||.||+|++..++ ..||+|+++.. ........+.+|+.+++.++||||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 57899999999999999999875432 35899998643 3334456799999999999999999999
Q ss_pred eeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-----------
Q 000880 490 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------- 557 (1239)
Q Consensus 490 ~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------- 557 (1239)
+++.. ...+|+|||||+ ++|.+++....
T Consensus 84 ~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 123 (295)
T cd05097 84 GVCVS----------------------------------------DDPLCMITEYMENGDLNQFLSQREIESTFTHANNI 123 (295)
T ss_pred EEEcC----------------------------------------CCccEEEEecCCCCcHHHHHHhccccccccccccC
Confidence 88732 345799999996 58999886432
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcc
Q 000880 558 -HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 636 (1239)
Q Consensus 558 -~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (1239)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++........ ......
T Consensus 124 ~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~ 190 (295)
T cd05097 124 PSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-------------YRIQGR 190 (295)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc-------------eeccCc
Confidence 367889999999999999999999999999999999999999999999999975421110 011123
Q ss_pred cccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc-----CCchhHHHHHHHHhh---hh--cCCCCCccccCCHHHH
Q 000880 637 QVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQE 706 (1239)
Q Consensus 637 ~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~~---~~--~~~~p~~~~~~~~e~~ 706 (1239)
..+++.|+|||++.+ ..++.++|||||||++|+|++ ||............. .. ...........++.+.
T Consensus 191 ~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (295)
T cd05097 191 AVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVF 269 (295)
T ss_pred CcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHH
Confidence 356789999999887 568999999999999999985 776544433322211 10 1111222334567899
Q ss_pred HHHHHccCCCCCCCCCHHHHHh
Q 000880 707 SLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 707 ~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
+||.+||+.||.+|||+.+|++
T Consensus 270 ~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 270 KLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHcCCCchhCcCHHHHHH
Confidence 9999999999999999999976
No 319
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.1e-33 Score=316.12 Aligned_cols=252 Identities=29% Similarity=0.453 Sum_probs=203.2
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
-|++++.||+|+||.||+|.+..++..||||++..... ......+.+|+.+++.++||||++++++|..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------- 73 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK---------- 73 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe----------
Confidence 46778999999999999999998999999998864432 2345678899999999999999999998743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
...+|+||||++ ++|.+++.. ..+++..+..++.|++.||.|||++|+
T Consensus 74 ------------------------------~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06641 74 ------------------------------DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK 122 (277)
T ss_pred ------------------------------CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCe
Confidence 356899999997 488888764 468999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+|+||||+||+++.++.++|+|||++....... .......|+..|+|||.+.+ ..++.++|+||
T Consensus 123 ~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~s 186 (277)
T cd06641 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWS 186 (277)
T ss_pred ecCCCCHHhEEECCCCCEEEeecccceecccch---------------hhhccccCCccccChhhhcc-CCCCchhhHHH
Confidence 999999999999999999999999987542211 01123468899999999876 56789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|||++|+|++ ||............. ....+......+.++.++|.+||+.+|.+||++.++++|+|+.+..
T Consensus 187 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 187 LGITAIELAKGEPPHSELHPMKVLFLIP--KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HHHHHHHHHcCCCCCCccchHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 9999999997 665544333322221 2222222234557899999999999999999999999999987653
No 320
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.8e-33 Score=312.47 Aligned_cols=245 Identities=24% Similarity=0.405 Sum_probs=194.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|++.+.||+|+||.||+|.++ ++..+|+|++...... ...+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTK--------- 70 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcC---------
Confidence 46888999999999999999987 5678999988643322 3468899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 119 (256)
T cd05059 71 -------------------------------QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN 119 (256)
T ss_pred -------------------------------CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999996 5899988753 4689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
|++||||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~--------------~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di 184 (256)
T cd05059 120 GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT--------------SSQGTKFPVKWAPPEVFDY-SRFSSKSDV 184 (256)
T ss_pred CcccccccHhhEEECCCCcEEECCcccceeccccccc--------------ccCCCCCCccccCHHHhcc-CCCCchhhH
Confidence 9999999999999999999999999998764321100 0111234568999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 662 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 662 wSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|||||++|||++ ||......+...... ....++.....++++.+++.+||+.+|++|||+.++++.
T Consensus 185 ~slG~il~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 185 WSFGVLMWEVFSEGKMPYERFSNSEVVESVS--AGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 999999999986 665544443332222 122222233457789999999999999999999999874
No 321
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.9e-33 Score=312.19 Aligned_cols=242 Identities=22% Similarity=0.324 Sum_probs=189.4
Q ss_pred eeccCCceEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 431 PLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--------------- 65 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--------------- 65 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc---------------
Confidence 4899999999999875 345679999886432 3344567899999999999999999998761
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 586 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHr 586 (1239)
...+++||||++ ++|.+++.. ...+++..++.++.||+.||+|||++|++||
T Consensus 66 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 119 (257)
T cd05115 66 --------------------------AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHR 119 (257)
T ss_pred --------------------------CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeec
Confidence 234689999996 589998874 4569999999999999999999999999999
Q ss_pred CCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHH
Q 000880 587 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 666 (1239)
Q Consensus 587 DLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 666 (1239)
||||+|||++.++.+||+|||++......... ....+...+++.|+|||++.+ ..++.++|||||||
T Consensus 120 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ 186 (257)
T cd05115 120 DLAARNVLLVNQHYAKISDFGLSKALGADDSY------------YKARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGI 186 (257)
T ss_pred ccchheEEEcCCCcEEeccCCccccccCCccc------------eeccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHH
Confidence 99999999999999999999999754321100 001122334678999999887 56899999999999
Q ss_pred HHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 667 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 667 iL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
++|||++ ||.......... .+. .+..++.....++++.++|.+||..||++||++.+|.+.
T Consensus 187 ~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 187 TMWEAFSYGQKPYKKMKGPEVMS-FIE-QGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred HHHHHhcCCCCCcCcCCHHHHHH-HHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999984 776554444332 222 222233334567899999999999999999999999764
No 322
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.4e-33 Score=309.95 Aligned_cols=247 Identities=30% Similarity=0.557 Sum_probs=204.8
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|++.+.||.|+||.||++.++.+++.||+|.+............+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD---------- 70 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc----------
Confidence 5889999999999999999999999999999998655444556678899999999999999999877632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....|++|||++ ++|.+++.. ...+++..++.++.|++.||+|||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 71 ------------------------------GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred ------------------------------CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 356899999996 589988865 356899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++|+||+|.||+++.++.+||+|||++...... ......|++.|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------~~~~~~~~~~~~~Pe~~~~-~~~~~~~ 182 (256)
T cd08530 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------MAKTQIGTPHYMAPEVWKG-RPYSYKS 182 (256)
T ss_pred hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------CcccccCCccccCHHHHCC-CCCCchh
Confidence 999999999999999999999999999999865321 0122468899999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
|+||||+++|+|++ ||............. ....++.....+.++.++|.+||+.+|++|||+.++++||+
T Consensus 183 D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 183 DIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ--RGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence 99999999999986 776554433332222 23334333456678999999999999999999999999986
No 323
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.2e-33 Score=311.37 Aligned_cols=243 Identities=26% Similarity=0.364 Sum_probs=192.1
Q ss_pred eeeccCCceEEEEEEEccCC---cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcC
Q 000880 430 QPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 506 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~ 506 (1239)
++||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.+.||||+++++.+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK------------- 66 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-------------
Confidence 46999999999999886555 78999998754433 44567899999999999999999998652
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 000880 507 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585 (1239)
Q Consensus 507 ~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiH 585 (1239)
....+++|||++ ++|.+++.....+++..++.++.|++.||+|||+++++|
T Consensus 67 ----------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H 118 (257)
T cd05060 67 ----------------------------GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVH 118 (257)
T ss_pred ----------------------------CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence 234689999996 699999988778999999999999999999999999999
Q ss_pred cCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHH
Q 000880 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 665 (1239)
Q Consensus 586 rDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 665 (1239)
|||||+|||++.++.+||+|||+++........ ........++..|+|||.+.+ ..++.++||||||
T Consensus 119 ~di~p~nili~~~~~~kl~df~~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG 185 (257)
T cd05060 119 RDLAARNVLLVNRHQAKISDFGMSRALGAGSDY------------YRATTAGRWPLKWYAPECINY-GKFSSKSDVWSYG 185 (257)
T ss_pred cCcccceEEEcCCCcEEeccccccceeecCCcc------------cccccCccccccccCHHHhcC-CCCCccchHHHHH
Confidence 999999999999999999999999865322100 000112235678999999887 5689999999999
Q ss_pred HHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 666 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 666 viL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|++|+|++ ||......+.... +. .....+.....++.+.++|.+||+.+|.+||++.++++.
T Consensus 186 ~~l~~~~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~ 251 (257)
T cd05060 186 VTLWEAFSYGAKPYGEMKGAEVIAM-LE-SGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST 251 (257)
T ss_pred HHHHHHHcCCCCCcccCCHHHHHHH-HH-cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999985 6655444333222 22 222223334556789999999999999999999999863
No 324
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.3e-33 Score=319.45 Aligned_cols=246 Identities=22% Similarity=0.315 Sum_probs=193.8
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~ 500 (1239)
++|++.+.||+|+||.||+|.++.++. .+++|.++. .........+.+|+.+++++ +||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------ 74 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIINLLGACEN------ 74 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc------
Confidence 589999999999999999999987765 468887762 22333456789999999999 79999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC----------------CCCHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKEL 563 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~~~~ 563 (1239)
...+|++|||++ ++|.+++.... .+++..
T Consensus 75 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 120 (297)
T cd05089 75 ----------------------------------RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQ 120 (297)
T ss_pred ----------------------------------CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHH
Confidence 245799999996 69999986532 478899
Q ss_pred HHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccC
Q 000880 564 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 643 (1239)
Q Consensus 564 ~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 643 (1239)
++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ........+..|
T Consensus 121 ~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~y 184 (297)
T cd05089 121 LLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY----------------VKKTMGRLPVRW 184 (297)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce----------------eccCCCCcCccc
Confidence 9999999999999999999999999999999999999999999998632110 001112335679
Q ss_pred CCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 000880 644 TAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 719 (1239)
Q Consensus 644 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 719 (1239)
+|||++.+ ..++.++|||||||++|||++ ||.............. +..++.....++.+.+||.+||..+|.+
T Consensus 185 ~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~ 261 (297)
T cd05089 185 MAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ--GYRMEKPRNCDDEVYELMRQCWRDRPYE 261 (297)
T ss_pred cCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence 99999887 568999999999999999985 7765554443333222 2222233346678999999999999999
Q ss_pred CCCHHHHHhc
Q 000880 720 RPSATELLQD 729 (1239)
Q Consensus 720 RPta~eiL~~ 729 (1239)
|||++++++.
T Consensus 262 Rp~~~~i~~~ 271 (297)
T cd05089 262 RPPFAQISVQ 271 (297)
T ss_pred CcCHHHHHHH
Confidence 9999999865
No 325
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=5.1e-33 Score=351.69 Aligned_cols=149 Identities=30% Similarity=0.563 Sum_probs=133.2
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
+++|.++++||+|+||.||+|.+..+++.||||+++.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------- 75 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS------- 75 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-------
Confidence 5789999999999999999999999999999999975432 23344678899999999999999999977632
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
..++|||||||. ++|.+++...+.+++..++.++.||+.||.|||+
T Consensus 76 ---------------------------------~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~ 122 (669)
T cd05610 76 ---------------------------------ANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR 122 (669)
T ss_pred ---------------------------------CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999995 6999999888889999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 611 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~ 611 (1239)
++|+||||||+||||+.++.+||+|||+++.
T Consensus 123 ~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 123 HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred CCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999999999999999999874
No 326
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.6e-33 Score=317.75 Aligned_cols=252 Identities=24% Similarity=0.395 Sum_probs=195.0
Q ss_pred CceEEeeeccCCceEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 425 DFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
.|++++.||+|+||.||+|++ +.++..||+|.++.. ........+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE-SGGNHIADLKKEIEILRNLYHENIVKYKGICTED----- 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----
Confidence 468889999999999999985 457889999998643 2334456799999999999999999999887432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
....+|++|||++ ++|.+++.+. ..+++..++.++.||+.||+||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~l 125 (284)
T cd05079 79 ---------------------------------GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL 125 (284)
T ss_pred ---------------------------------CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1345799999996 6999998764 3589999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|++|++||||||+|||++.++.+||+|||+++.+...... ........|+..|+|||++.+ ..++.+
T Consensus 126 H~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~apE~~~~-~~~~~~ 192 (284)
T cd05079 126 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY------------YTVKDDLDSPVFWYAPECLIQ-SKFYIA 192 (284)
T ss_pred HHCCeeecccchheEEEcCCCCEEECCCccccccccCccc------------eeecCCCCCCccccCHHHhcc-CCCCcc
Confidence 9999999999999999999999999999999865321100 001123457788999999887 568999
Q ss_pred hhhHHHHHHHHHhhc---CCchhH--------------HHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 000880 659 ADMYSLGIVFFELWH---PFSTAM--------------ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 721 (1239)
Q Consensus 659 sDIwSlGviL~ELlt---Pf~~~~--------------~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 721 (1239)
+|||||||++|||++ |+.... .......... .+...+.+...++.+.+||.+||+.||.+||
T Consensus 193 ~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 271 (284)
T cd05079 193 SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE-EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRT 271 (284)
T ss_pred ccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH-cCccCCCCCCCCHHHHHHHHHHccCCcccCc
Confidence 999999999999986 221110 0011111111 2223333455678999999999999999999
Q ss_pred CHHHHHhc
Q 000880 722 SATELLQD 729 (1239)
Q Consensus 722 ta~eiL~~ 729 (1239)
|+.+++++
T Consensus 272 t~~~il~~ 279 (284)
T cd05079 272 TFQNLIEG 279 (284)
T ss_pred CHHHHHHH
Confidence 99999875
No 327
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.8e-33 Score=316.88 Aligned_cols=255 Identities=25% Similarity=0.452 Sum_probs=208.3
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.+.|++.+.||.|+||.||+|.+..++..||+|++..... ....+.+|+.+++.++||||+++++++..
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 86 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLV-------- 86 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEE--------
Confidence 4568888999999999999999998999999999975433 45678899999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
....|+++||++ ++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 87 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~ 134 (286)
T cd06614 87 --------------------------------GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS 134 (286)
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999997 69999998876 89999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+|++|+||||+||+++.++.++|+|||++........ ......+++.|+|||++.+ ..++.++|
T Consensus 135 ~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~PE~~~~-~~~~~~~D 198 (286)
T cd06614 135 QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS---------------KRNSVVGTPYWMAPEVIKR-KDYGPKVD 198 (286)
T ss_pred CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh---------------hhccccCCcccCCHhHhcC-CCCCCccc
Confidence 9999999999999999999999999999875432110 1123458899999999887 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
+|||||++|+|++ ||..........................+.++.++|.+||+.+|.+|||+.++++|+|+.+..
T Consensus 199 v~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 199 IWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 9999999999997 666554433333322211111112223567899999999999999999999999999998743
No 328
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.3e-33 Score=310.21 Aligned_cols=243 Identities=25% Similarity=0.347 Sum_probs=198.0
Q ss_pred eeeccCCceEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcC
Q 000880 430 QPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 506 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~ 506 (1239)
+.||+|+||.||+|.+... +..||+|.++...... ....+.+|+..++.++||||+++++++..
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------------ 67 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE------------ 67 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC------------
Confidence 3699999999999999866 8999999987544332 45788999999999999999999987632
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeecc-CCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHH
Q 000880 507 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESY---------DHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 507 ~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~---------~~l~~~~~~~i~~qI~~gL~ 576 (1239)
...++++|||+ +++|.+++... ..+++..++.++.||+.||+
T Consensus 68 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 68 ----------------------------EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred ----------------------------CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 35679999999 57999999875 67999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||++|++||||||+||+++.++.+||+|||.+........ ........+++.|+|||.+.+ ..++
T Consensus 120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~ 185 (262)
T cd00192 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY-------------YRKKTGGKLPIRWMAPESLKD-GIFT 185 (262)
T ss_pred HHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc-------------cccccCCCcCccccCHHHhcc-CCcc
Confidence 99999999999999999999999999999999986532210 011234568899999999887 4689
Q ss_pred cchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 657 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
.++|||||||++|+|++ ||.............. ...+......++++.+++.+||+.+|.+|||+.+++++
T Consensus 186 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 186 SKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred hhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 99999999999999985 6665544433333222 22333334556799999999999999999999999875
No 329
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.7e-33 Score=305.81 Aligned_cols=248 Identities=30% Similarity=0.546 Sum_probs=201.8
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+|+..+.||+|++|.||++.+..+++.|++|++..... .....+.+|+.+++.++||||+++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 68 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLK---------- 68 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEec----------
Confidence 58889999999999999999998999999999875433 345689999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....++++||++ ++|.+++... ..+++..++.++.|++.||.|||++|
T Consensus 69 ------------------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 118 (253)
T cd05122 69 ------------------------------KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG 118 (253)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 246799999998 6999998776 57999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++||||+|+||+++.++.++|+|||++........ .....|+..|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----------------~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~ 181 (253)
T cd05122 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA----------------RNTMVGTPYWMAPEVING-KPYDYKADIW 181 (253)
T ss_pred EecCCCCHHHEEEccCCeEEEeecccccccccccc----------------ccceecCCcccCHHHHcC-CCCCccccHH
Confidence 99999999999999999999999999876532210 133568899999999987 4588999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
|||+++|+|++ ||....................+.....+..+.++|.+||+.||.+|||+.++++|||
T Consensus 182 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 182 SLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 99999999997 6665533333222222111111111222568999999999999999999999999997
No 330
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.3e-33 Score=312.74 Aligned_cols=256 Identities=32% Similarity=0.494 Sum_probs=203.5
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCc
Q 000880 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 510 (1239)
Q Consensus 432 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~ 510 (1239)
||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++.+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----------------- 63 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ----------------- 63 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-----------------
Confidence 6899999999999998999999999865432 2234567889999999999999999987652
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 000880 511 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 589 (1239)
Q Consensus 511 ~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLK 589 (1239)
....+|++|||++ ++|.+++.....+++..++.++.||+.||+|||++|++||||+
T Consensus 64 -----------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~ 120 (265)
T cd05579 64 -----------------------GKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120 (265)
T ss_pred -----------------------cCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence 2457899999996 5999999887789999999999999999999999999999999
Q ss_pred cccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHH
Q 000880 590 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 669 (1239)
Q Consensus 590 p~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 669 (1239)
|+||+++.++.++|+|||++.......... ............+++.|+|||.+.+ ..++.++||||||+++|
T Consensus 121 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~ 192 (265)
T cd05579 121 PDNILIDSNGHLKLTDFGLSKVGLVRRQIN-------LNDDEKEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILY 192 (265)
T ss_pred HHHeEEcCCCCEEEEecccchhcccCcccc-------cccccccccCcccCccccCHHHhcC-CCCCcchhhHHHHHHHH
Confidence 999999999999999999988643221000 0000112234568899999999887 45889999999999999
Q ss_pred Hhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH---HHHHhccCCCCch
Q 000880 670 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALPPQME 736 (1239)
Q Consensus 670 ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta---~eiL~~~~~~~~~ 736 (1239)
+|++ ||...................+ .....++.+.++|.+||+.+|.+|||+ .++++||||..+.
T Consensus 193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~ 264 (265)
T cd05579 193 EFLVGIPPFHGETPEEIFQNILNGKIEWP-EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264 (265)
T ss_pred HHHhCCCCCCCCCHHHHHHHHhcCCcCCC-ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence 9997 7765555544433333222222 222246789999999999999999999 9999999998654
No 331
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.6e-33 Score=316.25 Aligned_cols=252 Identities=30% Similarity=0.486 Sum_probs=201.6
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCc
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
|+..+.||+|+||.||+|++..+++.||+|++............+.+|+.+++.++||||+++++++..
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----------- 69 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT----------- 69 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-----------
Confidence 567789999999999999999999999999998654334445678899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
...+|+||||++++|.+++... ..+++..++.++.|++.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (282)
T cd07829 70 -----------------------------ERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRIL 120 (282)
T ss_pred -----------------------------CCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3568999999999999999876 5799999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
||||+|+||+++.++.+||+|||+++....... ......++..|+|||.+.+...++.++|||||
T Consensus 121 H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~---------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~sl 185 (282)
T cd07829 121 HRDLKPQNILINRDGVLKLADFGLARAFGIPLR---------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSV 185 (282)
T ss_pred cCCCChheEEEcCCCCEEEecCCcccccCCCcc---------------ccCccccCcCcCChHHhcCCcCCCccccHHHH
Confidence 999999999999999999999999976432110 11234567889999998774478999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHhhhh------------------cCCCC--------CccccCCHHHHHHHHHccCC
Q 000880 665 GIVFFELWH---PFSTAMERQIVLSDLKQ------------------KGELP--------PSWVAKFSEQESLLRRLMSP 715 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~~~~~~~~~~~~~------------------~~~~p--------~~~~~~~~e~~~LI~~~L~~ 715 (1239)
||++|||++ ||............... ....+ ..+...++.+.++|++||..
T Consensus 186 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 265 (282)
T cd07829 186 GCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQY 265 (282)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhcc
Confidence 999999997 56443322222111110 00000 11122356789999999999
Q ss_pred CCCCCCCHHHHHhccCC
Q 000880 716 SPSDRPSATELLQDALP 732 (1239)
Q Consensus 716 dP~~RPta~eiL~~~~~ 732 (1239)
||.+||++.+++.||||
T Consensus 266 ~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 266 NPAKRISAKEALKHPYF 282 (282)
T ss_pred CcccCCCHHHHhhCcCC
Confidence 99999999999999997
No 332
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.8e-33 Score=316.24 Aligned_cols=252 Identities=27% Similarity=0.459 Sum_probs=201.6
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCc
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
|++.+.||.|++|.||+|.+..+|+.+|+|.++...........+.+|+.+++.++||||+++++.+..
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----------- 69 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH----------- 69 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-----------
Confidence 567789999999999999999999999999987655444456678899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
...+|++|||++++|.+.+... ..+++..++.++.||+.||.|||+++|+
T Consensus 70 -----------------------------~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (283)
T cd05118 70 -----------------------------KGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL 120 (283)
T ss_pred -----------------------------CCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3568999999999998888764 5799999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
|+||||+||+++.++.++|+|||.+....... .......++..|+|||.+.+...++.++|+|||
T Consensus 121 H~dl~p~nili~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~sl 185 (283)
T cd05118 121 HRDLKPENLLINTEGVLKLADFGLARSFGSPV---------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSV 185 (283)
T ss_pred ecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---------------ccccCccCcccccCcHHHhcCCCCCchhHHHHH
Confidence 99999999999999999999999997653221 011234688899999998874468999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHhhhhcCC---------------------------CCCccccCCHHHHHHHHHccC
Q 000880 665 GIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------------LPPSWVAKFSEQESLLRRLMS 714 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~~~~~~~~~~~~~~~~---------------------------~p~~~~~~~~e~~~LI~~~L~ 714 (1239)
|+++|+|++ ||......+.........+. .+..+...+.++.++|.+||+
T Consensus 186 G~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 265 (283)
T cd05118 186 GCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLH 265 (283)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhc
Confidence 999999997 56443332222111110000 001122345688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 000880 715 PSPSDRPSATELLQDALP 732 (1239)
Q Consensus 715 ~dP~~RPta~eiL~~~~~ 732 (1239)
.||.+||++.+++.|||+
T Consensus 266 ~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 266 YDPHKRITAEQALAHPYF 283 (283)
T ss_pred cCcccCcCHHHHhhCCCC
Confidence 999999999999999996
No 333
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.1e-32 Score=318.70 Aligned_cols=251 Identities=25% Similarity=0.416 Sum_probs=202.2
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
-|...++||+|+||+||+|++..+|..||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 92 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK--------- 92 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe---------
Confidence 35666889999999999999999999999999875433 23344578899999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....|++||||++++.+++.. ...+++..++.++.||+.||.|||++|
T Consensus 93 -------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g 141 (313)
T cd06633 93 -------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN 141 (313)
T ss_pred -------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356799999999988888765 456899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCcchh
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKAD 660 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ksD 660 (1239)
++||||||+||+++.++.+||+|||++.... ......|++.|+|||++.. ...++.++|
T Consensus 142 i~H~dl~p~nili~~~~~~kL~dfg~~~~~~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sD 202 (313)
T cd06633 142 MIHRDIKAGNILLTEPGQVKLADFGSASKSS-------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVD 202 (313)
T ss_pred eecCCCChhhEEECCCCCEEEeecCCCcccC-------------------CCCCccccccccChhhccccCCCCCCchhh
Confidence 9999999999999999999999999986321 0123578999999999852 245888999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 661 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 661 IwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
||||||++|+|++ ||............... ..+. .....+..+++||.+||+.+|.+||++.++++|+|+....
T Consensus 203 v~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 203 VWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 9999999999996 66655444433333221 1121 1223445789999999999999999999999999998654
No 334
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.3e-33 Score=319.98 Aligned_cols=251 Identities=25% Similarity=0.424 Sum_probs=202.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+.|...+.||+|+||.||+|+++.+++.+|+|.+.... .......++.+|+.+++.++|||++++++++..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 86 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 86 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--------
Confidence 45777889999999999999999999999999987532 233345678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....|+||||+.+++.+++.. ...+++..++.++.|++.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~ 134 (308)
T cd06634 87 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134 (308)
T ss_pred --------------------------------CCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 346799999999988887754 45689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCcch
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 659 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 659 (1239)
+++||||||+||+++.++.++|+|||++..... .....|++.|+|||++.+ ...++.++
T Consensus 135 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 195 (308)
T cd06634 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANXFVGTPYWMAPEVILAMDEGQYDGKV 195 (308)
T ss_pred CcccCCCCHHhEEECCCCcEEECCcccceeecC-------------------cccccCCccccCHHHHhhcccCCCCccc
Confidence 999999999999999999999999999875421 123468899999999752 23578899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 660 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
|||||||++|+|++ ||.............. ...+. .....+..+.+||++||+.+|.+||++.++++|+|+...
T Consensus 196 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred chHHHHHHHHHHHcCCCCCccccHHHHHHHHhh--cCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 99999999999996 6655443333322222 12222 122445678999999999999999999999999998775
No 335
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=6.8e-33 Score=316.00 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=195.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
.++|++.+.||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDHPNIVKLLGVCAV--- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC-cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC---
Confidence 3689999999999999999999753 6789999998643 233445678899999999999999999987732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-------------------
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------- 557 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------- 557 (1239)
...+|++|||++ ++|.+++....
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (288)
T cd05050 80 -------------------------------------GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGL 122 (288)
T ss_pred -------------------------------------CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccc
Confidence 245799999997 59999886432
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 000880 558 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 634 (1239)
Q Consensus 558 ---~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1239)
.+++..++.++.||+.||+|||+++++||||||+|||++.++.++|+|||++......... ...
T Consensus 123 ~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~ 189 (288)
T cd05050 123 NPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------KAS 189 (288)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccc-------------ccc
Confidence 3678889999999999999999999999999999999999999999999998754221100 001
Q ss_pred cccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHH
Q 000880 635 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 710 (1239)
Q Consensus 635 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~ 710 (1239)
....+++.|+|||.+.+ ..++.++|||||||++|||++ ||......+..... . ....++.....++++.+||.
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~ 266 (288)
T cd05050 190 ENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV-R-DGNVLSCPDNCPLELYNLMR 266 (288)
T ss_pred CCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHH
Confidence 12245678999999887 568999999999999999985 66554444433322 2 23333333345678999999
Q ss_pred HccCCCCCCCCCHHHHHh
Q 000880 711 RLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~ 728 (1239)
+||+.||.+|||+.++++
T Consensus 267 ~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 267 LCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHcccCcccCCCHHHHHH
Confidence 999999999999999975
No 336
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.2e-33 Score=318.67 Aligned_cols=251 Identities=22% Similarity=0.289 Sum_probs=196.2
Q ss_pred cCCceEEeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 496 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~ 496 (1239)
.++|.+.+.||+|+||.||+|.+. .++..||||+++... .......+.+|+.+++++ +||||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTI-- 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec--
Confidence 468999999999999999999863 345689999886432 233456789999999999 89999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVE 573 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~ 573 (1239)
...+|++|||++ ++|.+++.... .+++.+++.++.||+.
T Consensus 111 --------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~ 152 (302)
T cd05055 111 --------------------------------------GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK 152 (302)
T ss_pred --------------------------------------CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 245799999996 69999987543 3899999999999999
Q ss_pred HHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 000880 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 653 (1239)
Q Consensus 574 gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 653 (1239)
||+|||+++|+|+||||+|||++.++.++|+|||+++....... ........+++.|+|||++.+ .
T Consensus 153 ~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~ 218 (302)
T cd05055 153 GMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFN-C 218 (302)
T ss_pred HHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCc-------------eeecCCCCcccccCCHhhhcc-C
Confidence 99999999999999999999999999999999999975432110 001122356789999999887 5
Q ss_pred CCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 654 KIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 654 ~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
.++.++|||||||++|||++ ||.............. .+..+......++++.+++.+||+.+|++|||+.++++.
T Consensus 219 ~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 219 VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK-EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 68999999999999999985 6654433333322222 222222333456789999999999999999999999864
No 337
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8e-33 Score=314.00 Aligned_cols=250 Identities=31% Similarity=0.473 Sum_probs=196.6
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccCCCC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
|++.+.||.|+||+||+|....+++.||||.+...... .......+|+..++.++ ||||+++++++..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~---------- 69 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRE---------- 69 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhc----------
Confidence 67789999999999999999988999999998654332 22234567999999999 9999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....|+||||++++|.+.+.... .+++..++.++.|++.||.|||++|
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 119 (283)
T cd07830 70 ------------------------------NDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119 (283)
T ss_pred ------------------------------CCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 35679999999989999887764 7899999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
++|+||||+||+++.++.++|+|||++....... ..+...|+..|+|||++.+...++.++|+|
T Consensus 120 i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 183 (283)
T cd07830 120 FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP----------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIW 183 (283)
T ss_pred cccCCCChhhEEEcCCCCEEEeecccceeccCCC----------------CcCCCCCcccccCceeeecCcCcCCccchh
Confidence 9999999999999999999999999997542111 112346889999999886655689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhh-------------------cCCCC--------CccccCCHHHHHHHHHc
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQ-------------------KGELP--------PSWVAKFSEQESLLRRL 712 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~-------------------~~~~p--------~~~~~~~~e~~~LI~~~ 712 (1239)
|||+++|||++ ||............... ....+ ......++++.++|++|
T Consensus 184 s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 263 (283)
T cd07830 184 ALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDM 263 (283)
T ss_pred hHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHh
Confidence 99999999997 55433222211111100 00000 01112346789999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 000880 713 MSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 713 L~~dP~~RPta~eiL~~~~~ 732 (1239)
|+.||.+|||+.+++.|+||
T Consensus 264 l~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 264 LRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccCcccCCCHHHHhhCCCC
Confidence 99999999999999999996
No 338
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.2e-32 Score=309.09 Aligned_cols=244 Identities=23% Similarity=0.321 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||+|+||.||+|.+. +++.||||.++.... ....+.+|+.++++++||||+++++++..
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 72 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTL--------- 72 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEec---------
Confidence 57899999999999999999976 567899999864332 24568899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
...+|++|||+ +++|.+++.... .+++..+..++.|++.||.|||+
T Consensus 73 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 121 (261)
T cd05068 73 -------------------------------EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA 121 (261)
T ss_pred -------------------------------CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 34579999999 579999987654 68999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+|++||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++|
T Consensus 122 ~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 186 (261)
T cd05068 122 QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY--------------EAREGAKFPIKWTAPEAALY-NRFSIKSD 186 (261)
T ss_pred CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc--------------cccCCCcCceeccCcccccc-CCCCchhh
Confidence 9999999999999999999999999999986531110 00111234568999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 661 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 661 IwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
+|||||++|||++ ||............ ..... ++.....+..+.+++.+||+.+|.+||++.++++
T Consensus 187 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 187 VWSFGILLTEIVTYGRMPYPGMTNAEVLQQV-DQGYR-MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-HcCCC-CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 9999999999996 67654444333222 22222 2223345678999999999999999999999975
No 339
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.1e-33 Score=331.56 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=195.1
Q ss_pred CCceEEeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 497 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~ 497 (1239)
++|.+.++||+|+||.||+|++. .++..||||+++.... ......+.+|+.+|..+. |||||+++++|..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~--- 112 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTK--- 112 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc---
Confidence 56888899999999999999964 3456899999975432 233457889999999997 9999999998843
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-------------------
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------- 557 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------- 557 (1239)
...+|+|||||+ |+|.++++...
T Consensus 113 -------------------------------------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T cd05107 113 -------------------------------------GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLIS 155 (401)
T ss_pred -------------------------------------CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccc
Confidence 245799999996 69999886431
Q ss_pred -------------------------------------------------------------------------------C
Q 000880 558 -------------------------------------------------------------------------------H 558 (1239)
Q Consensus 558 -------------------------------------------------------------------------------~ 558 (1239)
.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
T cd05107 156 GGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPA 235 (401)
T ss_pred cccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCC
Confidence 2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 000880 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 638 (1239)
Q Consensus 559 l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1239)
+++..++.++.||+.||+|||+++++||||||+|||++.++.+||+|||+++.+...... .......
T Consensus 236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~-------------~~~~~~~ 302 (401)
T cd05107 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY-------------ISKGSTF 302 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc-------------ccCCCcC
Confidence 566778899999999999999999999999999999999999999999999864221100 0112346
Q ss_pred cCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccC
Q 000880 639 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 714 (1239)
Q Consensus 639 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~ 714 (1239)
+++.|+|||++.+ ..++.++|||||||++|||++ ||......+.....+. .+..++.....+.++.+|+.+||.
T Consensus 303 ~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~li~~cl~ 380 (401)
T cd05107 303 LPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK-RGYRMAKPAHASDEIYEIMQKCWE 380 (401)
T ss_pred CCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcC
Confidence 7889999999987 568999999999999999985 6654433333333322 222233334566799999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000880 715 PSPSDRPSATELLQD 729 (1239)
Q Consensus 715 ~dP~~RPta~eiL~~ 729 (1239)
.+|.+||++.+|++.
T Consensus 381 ~~P~~RPs~~ell~~ 395 (401)
T cd05107 381 EKFEIRPDFSQLVHL 395 (401)
T ss_pred CChhHCcCHHHHHHH
Confidence 999999999999874
No 340
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.1e-32 Score=313.51 Aligned_cols=252 Identities=28% Similarity=0.443 Sum_probs=193.0
Q ss_pred CCceEEeeeccCCceEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
.+|++++.||+|+||.||+|.. ..++..||||.+... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---- 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC----
Confidence 4788999999999999999984 457889999988643 334456789999999999999999999876432
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....+++||||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 78 ----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~ 123 (284)
T cd05081 78 ----------------------------------GRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEY 123 (284)
T ss_pred ----------------------------------CCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHH
Confidence 1345799999996 6999998754 468999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++||+||||||+|||++.++.+||+|||++......... ........++..|+|||++.+ ..++.
T Consensus 124 LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~ 190 (284)
T cd05081 124 LGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY------------YKVREPGESPIFWYAPESLTE-SKFSV 190 (284)
T ss_pred HHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcc------------eeecCCCCCceEeeCHHHhcc-CCcCh
Confidence 99999999999999999999999999999999865321100 000112234556999999987 56899
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHH---------------HHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMER---------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 719 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~---------------~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 719 (1239)
++|||||||++|||++ |+...... ......+. ....++.....+.++.+||.+||+.+|++
T Consensus 191 ~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 269 (284)
T cd05081 191 ASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK-NNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269 (284)
T ss_pred HHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh-cCCcCCCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999999999986 22111000 00011111 12222333455678999999999999999
Q ss_pred CCCHHHHHhc
Q 000880 720 RPSATELLQD 729 (1239)
Q Consensus 720 RPta~eiL~~ 729 (1239)
|||+.++++.
T Consensus 270 Rpt~~ei~~~ 279 (284)
T cd05081 270 RPSFSELALQ 279 (284)
T ss_pred CCCHHHHHHH
Confidence 9999999864
No 341
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=9.8e-33 Score=311.10 Aligned_cols=249 Identities=21% Similarity=0.330 Sum_probs=196.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
.+|++.+.||+|+||.||+|.++.++. .+|+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK------ 76 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578899999999999999999875544 79999886432 33445678999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
...+|++|||++ ++|.+++... ..+++.+++.++.||+.||.||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l 122 (267)
T cd05066 77 ----------------------------------SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYL 122 (267)
T ss_pred ----------------------------------CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999996 5899998764 4689999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|++|++||||||+|||++.++.++|+|||++........ .........++..|+|||.+.+ ..++.+
T Consensus 123 H~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pe~~~~-~~~~~~ 189 (267)
T cd05066 123 SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE------------AAYTTRGGKIPIRWTAPEAIAY-RKFTSA 189 (267)
T ss_pred HHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc------------eeeecCCCccceeecCHhHhcc-CccCch
Confidence 999999999999999999999999999999986532110 0011122345678999999987 568999
Q ss_pred hhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 659 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 659 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
+|+|||||++||+++ ||......+...... ....++.....++.+.+++.+||+.+|.+||++.++++
T Consensus 190 ~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 190 SDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE--EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred hhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh--CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 999999999999874 665544433333222 22223333456778999999999999999999999986
No 342
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.1e-32 Score=308.61 Aligned_cols=241 Identities=24% Similarity=0.378 Sum_probs=192.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..+|++.+.||+|+||.||++... |..||+|.++.. .....+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 71 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-------
Confidence 468999999999999999999875 889999988532 2245788999999999999999999876432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....|++|||++ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 119 (256)
T cd05082 72 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119 (256)
T ss_pred --------------------------------CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 245799999997 59999987644 4889999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++||||||+||+++.++.+||+|||++...... .....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~ 180 (256)
T cd05082 120 ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCEeccccchheEEEcCCCcEEecCCccceecccc------------------CCCCccceeecCHHHHcc-CCCCchh
Confidence 999999999999999999999999999998753211 012245678999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|||||||++|||++ ||............ . ....+......++.+.++|.+||+.+|++|||+.++++.
T Consensus 181 Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999999999985 66543333322222 1 122222234556789999999999999999999999863
No 343
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.2e-32 Score=310.71 Aligned_cols=253 Identities=21% Similarity=0.322 Sum_probs=197.4
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
.++|++.+.||+|+||.||+|.++.+++ .||||++... ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----- 76 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK----- 76 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----
Confidence 3578999999999999999999987765 5999998643 234455789999999999999999999987632
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~y 577 (1239)
...++++|||++ ++|.+++... +.+++..++.++.|++.||.|
T Consensus 77 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~ 121 (269)
T cd05065 77 -----------------------------------SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 121 (269)
T ss_pred -----------------------------------CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 345799999996 5899888753 568999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++|++||||||+||+++.++.+||+|||++.......... . ........++..|+|||++.+ ..++.
T Consensus 122 lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~--~--------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (269)
T cd05065 122 LSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP--T--------YTSSLGGKIPIRWTAPEAIAY-RKFTS 190 (269)
T ss_pred HHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc--c--------cccccCCCcceeecCHhHhcc-Ccccc
Confidence 999999999999999999999999999999987653221000 0 000111223568999999987 56899
Q ss_pred chhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 658 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
++|||||||++|||++ ||............ ... ...+.....++.+.+++.+||..+|.+||++.++++.
T Consensus 191 ~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i-~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 191 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI-EQD-YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred hhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH-HcC-CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999874 77655444333332 212 2222334566789999999999999999999999863
No 344
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-32 Score=317.93 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=194.9
Q ss_pred CCceEEeeeccCCceEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeec
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 495 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~ 495 (1239)
++|.+.+.||+|+||.||+|++.. ++..||+|.++.. ........+.+|+.+++.+ +||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC-CChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 679999999999999999998753 2357999998743 2333456788999999999 79999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----------------CC
Q 000880 496 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DH 558 (1239)
Q Consensus 496 ~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~ 558 (1239)
...+|+||||++ ++|.+++... ..
T Consensus 96 ---------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 136 (307)
T cd05098 96 ---------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ 136 (307)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 345799999996 5999999753 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 000880 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 638 (1239)
Q Consensus 559 l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1239)
+++.+++.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++........ .......
T Consensus 137 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~-------------~~~~~~~ 203 (307)
T cd05098 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-------------KKTTNGR 203 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchh-------------hccccCC
Confidence 788999999999999999999999999999999999999999999999998754321100 0112234
Q ss_pred cCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccC
Q 000880 639 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 714 (1239)
Q Consensus 639 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~ 714 (1239)
+++.|+|||++.+ ..++.++|||||||++|||++ ||..... ......+. ....++.....+.++.+||.+||.
T Consensus 204 ~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 280 (307)
T cd05098 204 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLK-EGHRMDKPSNCTNELYMMMRDCWH 280 (307)
T ss_pred CccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHHH-cCCCCCCCCcCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 5644333 22232332 222233334556789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000880 715 PSPSDRPSATELLQD 729 (1239)
Q Consensus 715 ~dP~~RPta~eiL~~ 729 (1239)
.+|.+|||+.+++++
T Consensus 281 ~~p~~Rps~~evl~~ 295 (307)
T cd05098 281 AVPSQRPTFKQLVED 295 (307)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999875
No 345
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=329.47 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=206.0
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccC-C--cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLD-G--RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~-g--~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
-.++..+.++||+|.||.|++|.|... | ..||||+++..... .....|++|+.+|.+|+|||++++||....
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~-~~mddflrEas~M~~L~H~hliRLyGvVl~---- 182 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN-AIMDDFLREASHMLKLQHPHLIRLYGVVLD---- 182 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc-hhHHHHHHHHHHHHhccCcceeEEeeeecc----
Confidence 345667778999999999999999754 3 35999999754333 267789999999999999999999998742
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~~~~~~~i~~qI~~gL 575 (1239)
..+.||||+|+ |+|.+.|+. ...|.......|+.||+.||
T Consensus 183 -------------------------------------qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM 225 (1039)
T KOG0199|consen 183 -------------------------------------QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAM 225 (1039)
T ss_pred -------------------------------------chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHH
Confidence 34579999997 799999986 34588889999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 655 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 655 (1239)
.||.++++|||||..+|+|+-....|||||||+.+.+...+.. ........-...|+|||.|.. ..+
T Consensus 226 ~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~------------Yvm~p~rkvPfAWCaPEsLrh-~kF 292 (1039)
T KOG0199|consen 226 QYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM------------YVMAPQRKVPFAWCAPESLRH-RKF 292 (1039)
T ss_pred HHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc------------eEecCCCcCcccccCHhHhcc-ccc
Confidence 9999999999999999999999999999999999987544311 111122334568999999997 679
Q ss_pred CcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 656 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+.++|+|+|||++|||++ ||.+....+++..+- .+...+-...++.++.++++.||..+|.+|||+..|...
T Consensus 293 ShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD--~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 293 SHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID--AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred cccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc--ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 999999999999999997 888877776665443 455555556777899999999999999999999999754
No 346
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-32 Score=314.99 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=195.4
Q ss_pred CCceEEeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.+|.+.+.||+|+||.||+|.+. .++..+++|.+.. ........+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD--PTLAARKDFQREAELLTNLQHEHIVKFYGVCGD---- 78 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC--ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc----
Confidence 57899999999999999999864 2456799998753 233344678899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----------------CCCCH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFDK 561 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~~ 561 (1239)
...+++||||++ ++|.+++... ..+++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 122 (291)
T cd05094 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 122 (291)
T ss_pred ------------------------------------CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCH
Confidence 345799999996 6999998653 23789
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCc
Q 000880 562 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 641 (1239)
Q Consensus 562 ~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 641 (1239)
..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||+++....... ........|++
T Consensus 123 ~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~-------------~~~~~~~~~~~ 189 (291)
T cd05094 123 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPI 189 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce-------------eecCCCCCcce
Confidence 99999999999999999999999999999999999999999999999975432110 01122346788
Q ss_pred cCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 000880 642 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 717 (1239)
Q Consensus 642 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 717 (1239)
.|+|||++.+ ..++.++|||||||++|||++ ||............ . .+..+......+..+.+++.+||+.||
T Consensus 190 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~P 266 (291)
T cd05094 190 RWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI-T-QGRVLERPRVCPKEVYDIMLGCWQREP 266 (291)
T ss_pred eecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-CCCCCCCCccCCHHHHHHHHHHcccCh
Confidence 9999999887 568999999999999999986 66544443332222 1 233333333456789999999999999
Q ss_pred CCCCCHHHHHhc
Q 000880 718 SDRPSATELLQD 729 (1239)
Q Consensus 718 ~~RPta~eiL~~ 729 (1239)
.+|||+.++++.
T Consensus 267 ~~Rpt~~~v~~~ 278 (291)
T cd05094 267 QQRLNIKEIYKI 278 (291)
T ss_pred hhCcCHHHHHHH
Confidence 999999999864
No 347
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.4e-33 Score=312.31 Aligned_cols=246 Identities=26% Similarity=0.359 Sum_probs=199.0
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
..+|++.++||.|+||.||+|.++. ++.+|+|++..... .....+.+|+.+++.++||||+++++.+..
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 73 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSV-------- 73 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEec--------
Confidence 3578999999999999999999986 89999999875432 235678899999999999999999987632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||.|||
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH 121 (261)
T cd05148 74 --------------------------------GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE 121 (261)
T ss_pred --------------------------------CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 5999998753 45899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++||||||+|||++.++.+||+|||++........ ......+++.|+|||++.+ ..++.++
T Consensus 122 ~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~---------------~~~~~~~~~~~~~PE~~~~-~~~~~~~ 185 (261)
T cd05148 122 EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY---------------LSSDKKIPYKWTAPEAASH-GTFSTKS 185 (261)
T ss_pred HCCeeccccCcceEEEcCCceEEEccccchhhcCCccc---------------cccCCCCceEecCHHHHcc-CCCCchh
Confidence 99999999999999999999999999999986532110 0123356788999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
||||||+++|+|++ ||......+...... ....++.....++.+.++|.+||+.||.+|||+.++++.
T Consensus 186 DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 186 DVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT--AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred hHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH--hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 99999999999985 665554444433332 222233345667789999999999999999999999863
No 348
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.8e-32 Score=308.71 Aligned_cols=250 Identities=21% Similarity=0.325 Sum_probs=196.8
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
++|+..+.||+|+||.||+|+++.++. .+|+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK------ 77 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc------
Confidence 578889999999999999999986665 79999886432 23345678999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
....|++|||++ ++|.+++... ..+++..+..++.|++.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 123 (268)
T cd05063 78 ----------------------------------FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL 123 (268)
T ss_pred ----------------------------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 245799999997 5899888753 5689999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|++|++||||||+||+++.++.+||+|||++........ ..........++.|+|||++.+ ..++.+
T Consensus 124 H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~PE~~~~-~~~~~~ 190 (268)
T cd05063 124 SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE------------GTYTTSGGKIPIRWTAPEAIAY-RKFTSA 190 (268)
T ss_pred HHCCeeccccchhhEEEcCCCcEEECCCccceecccccc------------cceeccCCCcCceecCHHHhhc-CCcChH
Confidence 999999999999999999999999999999876432110 0001122234568999999887 568999
Q ss_pred hhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 659 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 659 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+|||||||++|||++ ||...........+ .. ....+.....++.+.+++.+||+.+|++||++.++++.
T Consensus 191 ~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i-~~-~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 191 SDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI-ND-GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH-hc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999875 77554443333222 22 22333334567789999999999999999999999864
No 349
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-32 Score=317.41 Aligned_cols=250 Identities=23% Similarity=0.358 Sum_probs=195.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEc-------cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeee
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 494 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~-------~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e 494 (1239)
..+|.+.+.||+|+||.||+|++. .++..||+|.+... ........+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 468899999999999999999863 23457999988632 2334456789999999999 89999999988732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----------------C
Q 000880 495 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------D 557 (1239)
Q Consensus 495 ~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~ 557 (1239)
...+|++|||++ ++|.+++... .
T Consensus 93 ----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 132 (304)
T cd05101 93 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDE 132 (304)
T ss_pred ----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcc
Confidence 346799999996 5999998753 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 000880 558 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 637 (1239)
Q Consensus 558 ~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1239)
.++...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++....... .......
T Consensus 133 ~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~-------------~~~~~~~ 199 (304)
T cd05101 133 QMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY-------------YKKTTNG 199 (304)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc-------------cccccCC
Confidence 467788999999999999999999999999999999999999999999999986532110 0111233
Q ss_pred ccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHcc
Q 000880 638 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 713 (1239)
Q Consensus 638 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L 713 (1239)
.+++.|+|||++.+ ..++.++|||||||++|+|++ ||......+. ...+.. ...+......+.++.+||.+||
T Consensus 200 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~li~~cl 276 (304)
T cd05101 200 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-FKLLKE-GHRMDKPANCTNELYMMMRDCW 276 (304)
T ss_pred CCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH-HHHHHc-CCcCCCCCCCCHHHHHHHHHHc
Confidence 56788999999987 568999999999999999986 5544333332 222222 2222233456678999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 000880 714 SPSPSDRPSATELLQD 729 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~ 729 (1239)
..+|.+|||+.++++.
T Consensus 277 ~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 277 HAIPSHRPTFKQLVED 292 (304)
T ss_pred ccChhhCCCHHHHHHH
Confidence 9999999999999975
No 350
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-33 Score=321.36 Aligned_cols=244 Identities=23% Similarity=0.356 Sum_probs=202.9
Q ss_pred ceEEeeeccCCceEEEEEEEccC--C--cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLD--G--RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~--g--~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
....+.||.|.||.||+|....- | -.||||..+ .+++.+..+.|+.|..+|++++|||||+++|.|.+
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK-~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------- 462 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCK-TDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------- 462 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhc-cCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-------
Confidence 34456799999999999987522 2 358889765 44666678899999999999999999999999854
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...|||||+++ |.|..+|+.+. .++......|+.||+.||+|||
T Consensus 463 ----------------------------------~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe 508 (974)
T KOG4257|consen 463 ----------------------------------QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE 508 (974)
T ss_pred ----------------------------------cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH
Confidence 34699999998 79999998654 5888999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+..+|||||..+|||+.+..-|||+|||+++.+....... .+...-..-|||||.++- ..++.++
T Consensus 509 SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk--------------aS~~kLPIKWmaPESINf-RrFTtAS 573 (974)
T KOG4257|consen 509 SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK--------------ASRGKLPIKWMAPESINF-RRFTTAS 573 (974)
T ss_pred hhchhhhhhhhhheeecCcceeeecccchhhhccccchhh--------------ccccccceeecCccccch-hcccchh
Confidence 9999999999999999999999999999999876443221 122234557999999886 6799999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
|||.|||++||++. ||....+......+ +++..+|-++.++|.+..|+.+||+.||.+||++.+|..
T Consensus 574 DVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i--EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 574 DVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI--ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred hHHHHHHHHHHHHHhcCCccccccccceEEEe--cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 99999999999985 99877665544322 367777778889999999999999999999999999864
No 351
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.6e-32 Score=308.71 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=192.8
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.++||+|+||.||+|++..+ ..||+|+++..... ...+.+|+.+++.++||||+++++.+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~---------- 71 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS---------- 71 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEEC----------
Confidence 5799999999999999999998755 56999998743332 356889999999999999999987651
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~ 120 (262)
T cd05071 72 -------------------------------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120 (262)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 134589999997 5999998753 358899999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
++++||||||+||+++.++.+||+|||+++........ ......++..|+|||++.+ ..++.++|
T Consensus 121 ~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~--------------~~~~~~~~~~y~~PE~~~~-~~~~~~~D 185 (262)
T cd05071 121 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--------------ARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (262)
T ss_pred CCccccccCcccEEEcCCCcEEeccCCceeeccccccc--------------cccCCcccceecCHhHhcc-CCCCchhh
Confidence 99999999999999999999999999999765322100 0112346778999999876 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 661 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 661 IwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
||||||++|||++ ||.............. . ..++.....+..+.++|.+||+.||.+||++.++++
T Consensus 186 vwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 186 VWSFGILLTELTTKGRVPYPGMVNREVLDQVER-G-YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-C-CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9999999999997 6765544433332221 1 122223455678999999999999999999999875
No 352
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-34 Score=296.78 Aligned_cols=263 Identities=24% Similarity=0.335 Sum_probs=201.0
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
-++|++.+.||.|||+-||++++..++..||+|++.+.. .+..+..++|+...++++|||++++++..+...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~------ 91 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREE------ 91 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhh------
Confidence 468999999999999999999999999999999998654 456778999999999999999999987653320
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~----~~l~~~~~~~i~~qI~~gL~y 577 (1239)
.......||++.|. .|+|.+.+... ..+++.+++.++.+|++||++
T Consensus 92 -----------------------------~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~ 142 (302)
T KOG2345|consen 92 -----------------------------KDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEA 142 (302)
T ss_pred -----------------------------ccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHH
Confidence 01245689999998 58999988643 469999999999999999999
Q ss_pred HHhCC--ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--C
Q 000880 578 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--P 653 (1239)
Q Consensus 578 LHs~g--IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~ 653 (1239)
||+.. ++||||||.|||+.+++.++|.|||.++.....-..+... ..-.......-|.-|.|||.+.-+ .
T Consensus 143 lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a------~~lQe~a~e~Ct~pyRAPELf~vk~~~ 216 (302)
T KOG2345|consen 143 LHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQA------LRLQEWAEERCTIPYRAPELFNVKSHC 216 (302)
T ss_pred HhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHH------HHHHHHHHHhCCCcccCchheecccCc
Confidence 99998 9999999999999999999999999998642211000000 000011233467889999988653 3
Q ss_pred CCCcchhhHHHHHHHHHhhc---CCchhHHHHHH--HHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 654 KIDEKADMYSLGIVFFELWH---PFSTAMERQIV--LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 654 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~--~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
..+.++|||||||+||+|+. ||........- +........+|... ..+..+.++|+.||+.||.+||++.+++.
T Consensus 217 ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~-~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 217 TITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSS-RYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred ccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCC-CccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 46899999999999999984 88644332111 11122122334332 25668899999999999999999999987
Q ss_pred c
Q 000880 729 D 729 (1239)
Q Consensus 729 ~ 729 (1239)
+
T Consensus 296 ~ 296 (302)
T KOG2345|consen 296 K 296 (302)
T ss_pred H
Confidence 5
No 353
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-33 Score=326.92 Aligned_cols=244 Identities=23% Similarity=0.355 Sum_probs=197.6
Q ss_pred CCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCc
Q 000880 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 419 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~ 497 (1239)
+..+..+|++...+|.|+|+.|..|.+..+++.+++|++..... +..+|+.++... +||||+++++.+.
T Consensus 317 ~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~---- 386 (612)
T KOG0603|consen 317 TAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYE---- 386 (612)
T ss_pred cCCcchhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceec----
Confidence 34567889999999999999999999999999999999975421 234567665555 8999999998872
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
+..+.|+|||++.| -+.+.+.....+. .++..|+.+|+.|+.
T Consensus 387 ------------------------------------~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~ 429 (612)
T KOG0603|consen 387 ------------------------------------DGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVD 429 (612)
T ss_pred ------------------------------------CCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHH
Confidence 35788999999975 5555555544444 788889999999999
Q ss_pred HHHhCCccccCCCcccEEE-cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFF-DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 655 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl-~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 655 (1239)
|||++|+|||||||+|||+ ++.++++|+|||+++..... -.+.+.|..|.|||++.. ..|
T Consensus 430 ~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~------------------~~tp~~t~~y~APEvl~~-~~y 490 (612)
T KOG0603|consen 430 YLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS------------------CDTPALTLQYVAPEVLAI-QEY 490 (612)
T ss_pred HHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh------------------hcccchhhcccChhhhcc-CCC
Confidence 9999999999999999999 58899999999999875432 123478999999999996 789
Q ss_pred CcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 656 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+.+|||||||++||+|++ ||.........+..+ ..++.-...+.++++||..||+.||.+||++.+++.|+|+
T Consensus 491 t~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 491 TEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 999999999999999996 666554442222222 2222225677899999999999999999999999999999
No 354
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.3e-32 Score=312.70 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=194.1
Q ss_pred CCceEEeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.+|.+.++||+|+||.||++... .++..+|+|.+.. ........+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTVLQHQHIVRFYGVCTE---- 78 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc--CCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec----
Confidence 57888999999999999999753 3467899998763 233445679999999999999999999987732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC---------------CCCHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------HFDKE 562 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------~l~~~ 562 (1239)
....+++|||++ ++|.+++.... .+++.
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05092 79 ------------------------------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLG 122 (280)
T ss_pred ------------------------------------CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHH
Confidence 345799999996 68999887542 47899
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 000880 563 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 642 (1239)
Q Consensus 563 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 642 (1239)
.++.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........+++.
T Consensus 123 ~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05092 123 QMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY-------------YRVGGRTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCce-------------eecCCCcccccc
Confidence 9999999999999999999999999999999999999999999999875421110 001122346788
Q ss_pred CCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 000880 643 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 718 (1239)
Q Consensus 643 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 718 (1239)
|+|||++.+ ..++.++|||||||++|||++ ||............. .+..+......++.+.++|.+||+.||.
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~P~ 266 (280)
T cd05092 190 WMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT--QGRELERPRTCPPEVYAIMQGCWQREPQ 266 (280)
T ss_pred ccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH--cCccCCCCCCCCHHHHHHHHHHccCChh
Confidence 999999887 568999999999999999986 665444433332222 2222233345678899999999999999
Q ss_pred CCCCHHHHHh
Q 000880 719 DRPSATELLQ 728 (1239)
Q Consensus 719 ~RPta~eiL~ 728 (1239)
+||++.++++
T Consensus 267 ~Rp~~~~l~~ 276 (280)
T cd05092 267 QRMVIKDIHS 276 (280)
T ss_pred hCCCHHHHHH
Confidence 9999999985
No 355
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.4e-33 Score=319.69 Aligned_cols=258 Identities=22% Similarity=0.306 Sum_probs=194.7
Q ss_pred eeccC--CceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 431 PLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 431 ~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
+||+| ++|.||+++++.+++.||||+++...........+.+|+.+++.++||||++++++|..
T Consensus 5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-------------- 70 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-------------- 70 (314)
T ss_pred hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec--------------
Confidence 34444 55667777777789999999998664555566789999999999999999999988743
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIH 585 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs~gIiH 585 (1239)
....|++||||+ ++|.+++... ..+++..+..++.||+.||+|||+++|+|
T Consensus 71 --------------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH 124 (314)
T cd08216 71 --------------------------DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIH 124 (314)
T ss_pred --------------------------CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 346799999997 6898888753 45899999999999999999999999999
Q ss_pred cCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCcchhhHHH
Q 000880 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSL 664 (1239)
Q Consensus 586 rDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSl 664 (1239)
|||||+|||++.++.+||+|||.+..+........ ..........++..|+|||++.+. ..++.++|||||
T Consensus 125 ~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~ 196 (314)
T cd08216 125 RSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR--------VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSV 196 (314)
T ss_pred CCCCcceEEEecCCceEEecCccceeecccccccc--------ccccccccccccccccCHHHhcCCCCCCCcchhHHHH
Confidence 99999999999999999999999876532211000 001112345688899999998753 348899999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHhhhhcC-------CCCC------------------------ccccCCHHHHHHHH
Q 000880 665 GIVFFELWH---PFSTAMERQIVLSDLKQKG-------ELPP------------------------SWVAKFSEQESLLR 710 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~~~~~~~~~~~~~~~-------~~p~------------------------~~~~~~~e~~~LI~ 710 (1239)
||++|||++ ||................. ..+. .....++++.+||.
T Consensus 197 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 276 (314)
T cd08216 197 GITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVE 276 (314)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHH
Confidence 999999996 7765544333322221100 0000 00011246789999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 000880 711 RLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
+||..||++|||+.++++||||.++.
T Consensus 277 ~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 277 LCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred HHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 99999999999999999999988663
No 356
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.6e-32 Score=307.94 Aligned_cols=244 Identities=25% Similarity=0.358 Sum_probs=193.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||+|+||.||+|.+. ++..||+|.++..... ...+.+|+.+++.++||||+++++.+.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~--------- 71 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS--------- 71 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC---------
Confidence 367899999999999999999876 6678999998754332 356889999999999999999987651
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH 119 (260)
T cd05070 72 --------------------------------EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 119 (260)
T ss_pred --------------------------------CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123589999996 5999988753 35899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++||||||+||+++.++.++|+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 184 (260)
T cd05070 120 RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 184 (260)
T ss_pred HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc--------------ccccCCCCCccccChHHHhc-CCCcchh
Confidence 99999999999999999999999999999976432110 00112245678999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
||||||+++|+|++ ||......+..... . ....++.....+..+.+|+.+||..+|.+|||+.++++
T Consensus 185 Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 185 DVWSFGILLTELVTKGRVPYPGMNNREVLEQV-E-RGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-H-cCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999986 66554443333222 2 12222333455678999999999999999999999874
No 357
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.4e-32 Score=305.59 Aligned_cols=241 Identities=23% Similarity=0.383 Sum_probs=195.3
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||.|+||.||+|... |+.||||.++.... ...++.+|+.+++.++||||+++++.+..
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 71 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-------- 71 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcC--------
Confidence 468899999999999999999875 89999999874322 45679999999999999999999988632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....|+||||++ ++|.+++.... .+++..++.++.|++.||.|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh 119 (256)
T cd05039 72 --------------------------------GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE 119 (256)
T ss_pred --------------------------------CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999997665 6999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++||||||+||+++.++.+||+|||+++...... ....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~------------------~~~~~~~~~~ape~~~~-~~~~~~~ 180 (256)
T cd05039 120 EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ------------------DSGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCccchhcccceEEEeCCCCEEEccccccccccccc------------------ccCCCcccccCchhhcC-CcCCcHH
Confidence 9999999999999999999999999999998642111 12234667999999876 5688999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
||||||+++|||++ ||......... ..+.. ...+......++++.++|.+||..+|.+|||+.++++.
T Consensus 181 Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVV-PHVEK-GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHhc-CCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 99999999999985 66554433322 22221 11222223456789999999999999999999999864
No 358
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.5e-32 Score=314.83 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=191.5
Q ss_pred CCceEEeeeccCCceEEEEEEEcc----------------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceee
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 487 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~----------------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~ 487 (1239)
++|++.+.||+|+||.||+|++.. ++..||+|+++.. ........+.+|+.+++.++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 578999999999999999997542 3457999988643 23334567899999999999999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC---------
Q 000880 488 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 557 (1239)
Q Consensus 488 l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 557 (1239)
+++++.. ....|++|||++ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (296)
T cd05095 84 LLAVCIT----------------------------------------SDPLCMITEYMENGDLNQFLSRHEPQEAAEKAD 123 (296)
T ss_pred EEEEEec----------------------------------------CCccEEEEEeCCCCcHHHHHHhcCccccccccc
Confidence 9988733 245799999996 69999886532
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCc
Q 000880 558 --HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 635 (1239)
Q Consensus 558 --~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1239)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||+++.+...... ....
T Consensus 124 ~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~ 190 (296)
T cd05095 124 VVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY-------------RIQG 190 (296)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcce-------------eccC
Confidence 3677889999999999999999999999999999999999999999999999764221100 0011
Q ss_pred ccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc-----CCchhHHHHHHHHhh---hh--cCCCCCccccCCHHH
Q 000880 636 GQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQ 705 (1239)
Q Consensus 636 ~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~~---~~--~~~~p~~~~~~~~e~ 705 (1239)
...+++.|+|||+..+ ..++.++|||||||++|||++ ||......+...... .. .....+.....++.+
T Consensus 191 ~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (296)
T cd05095 191 RAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSL 269 (296)
T ss_pred cCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHH
Confidence 2345678999998776 568999999999999999985 665444333222110 00 111122233455789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHh
Q 000880 706 ESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 706 ~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
.+||.+||+.||.+||++.+|++
T Consensus 270 ~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 270 YKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999999999999975
No 359
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=329.97 Aligned_cols=251 Identities=23% Similarity=0.351 Sum_probs=209.0
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
.+...+.++||.|.||+|++|+.+..|+ .||||.++.. -+.....+|+.|..||-+++||||+++.|+..
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT------ 700 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT------ 700 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe------
Confidence 4556788999999999999999997774 6999999743 34556678999999999999999999998862
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~y 577 (1239)
...-+.||+|||. |+|..+|+.+ +.|+.-+..-+++.|+.||+|
T Consensus 701 ----------------------------------ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkY 746 (996)
T KOG0196|consen 701 ----------------------------------KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKY 746 (996)
T ss_pred ----------------------------------cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHH
Confidence 2456789999995 7999999865 569999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
|-++|+|||||..+|||++.+..+|++|||+++.+.... ...+ +..+..-..+|.|||++.. .+++.
T Consensus 747 Lsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~---~~~y---------tt~GGKIPiRWTAPEAIa~-RKFTs 813 (996)
T KOG0196|consen 747 LSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP---EAAY---------TTLGGKIPIRWTAPEAIAY-RKFTS 813 (996)
T ss_pred HhhcCchhhhhhhhheeeccceEEEeccccceeecccCC---Cccc---------cccCCccceeecChhHhhh-cccCc
Confidence 999999999999999999999999999999999874332 1111 1122234578999999987 67999
Q ss_pred chhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 658 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
++|||||||+|||.++ |+++..+.+....+ .+..++|+ +.+++..+..||..||++|-..||.+.+|+.+
T Consensus 814 ASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI-e~gyRLPp-PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 814 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EQGYRLPP-PMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred hhhccccceEEEEecccCCCcccccchHHHHHHH-HhccCCCC-CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 9999999999999996 99988777665444 43455554 45778899999999999999999999999875
No 360
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.9e-32 Score=306.32 Aligned_cols=244 Identities=25% Similarity=0.377 Sum_probs=193.0
Q ss_pred eeeccCCceEEEEEEEcc-CCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcC
Q 000880 430 QPLGHGGFGHVVLCKNKL-DGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 506 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~-~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~ 506 (1239)
+.||+|+||.||+|.+.. .++ .||||.++..... .....+.+|+.++++++||||+++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVL------------- 66 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEc-------------
Confidence 368999999999999865 333 6999998754433 55678999999999999999999998762
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 507 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 507 ~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
. ..++++|||++ ++|.+++.... .+++..++.++.||+.||+|||++|+
T Consensus 67 ---------------------------~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 118 (257)
T cd05040 67 ---------------------------T-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF 118 (257)
T ss_pred ---------------------------C-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1 46799999996 69999987654 68999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+||+++.++.+||+|||++..+..... .........++..|+|||++.+ ..++.++||||
T Consensus 119 ~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~s 185 (257)
T cd05040 119 IHRDLAARNILLASDDKVKIGDFGLMRALPQNED------------HYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWM 185 (257)
T ss_pred cccccCcccEEEecCCEEEecccccccccccccc------------ceecccCCCCCceecCHHHhcc-cCcCchhhhHH
Confidence 9999999999999999999999999987532210 0011123467889999999887 56899999999
Q ss_pred HHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 664 LGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 664 lGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|||++|||++ ||......+....... .....+.....+..+.+++.+||+.+|++|||+.++++.
T Consensus 186 lG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 186 FGVTLWEMFTYGEEPWAGLSGSQILKKIDK-EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 9999999986 6654444443333222 222222223456789999999999999999999999863
No 361
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.4e-32 Score=306.49 Aligned_cols=244 Identities=26% Similarity=0.374 Sum_probs=194.3
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|+++++||+|+||.||+|..+ +++.||+|.+...... ...+.+|+.+++.++||||+++++.+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 71 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT--------- 71 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc---------
Confidence 468999999999999999999876 6789999998744332 457889999999999999999987641
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...+|++|||+. ++|.+++... ..+++.+++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH 119 (260)
T cd05067 72 --------------------------------QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE 119 (260)
T ss_pred --------------------------------cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 234689999996 6999988653 35899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++||||||+||+++.++.++|+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (260)
T cd05067 120 RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY--------------TAREGAKFPIKWTAPEAINY-GTFTIKS 184 (260)
T ss_pred cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc--------------ccccCCcccccccCHHHhcc-CCcCccc
Confidence 99999999999999999999999999999976432110 01123356788999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
||||||+++|||++ ||........... +. ....++.....+.++.++|.+||+.+|++|||+++++.
T Consensus 185 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 185 DVWSFGILLTEIVTYGRIPYPGMTNPEVIQN-LE-RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred chHHHHHHHHHHHhCCCCCCCCCChHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999996 6755443333222 22 22222333445678999999999999999999999975
No 362
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.1e-32 Score=312.41 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=192.5
Q ss_pred CceEEeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
+|++.+.||+|+||.||+|.+.. ....+|+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ----- 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC-CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----
Confidence 47788999999999999998753 2357889887633 333345678999999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----------------------
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------------- 556 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------------- 556 (1239)
....|++|||++ ++|.+++...
T Consensus 75 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (290)
T cd05045 75 -----------------------------------DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNP 119 (290)
T ss_pred -----------------------------------CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCc
Confidence 234689999997 6899887642
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 000880 557 --DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 634 (1239)
Q Consensus 557 --~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1239)
..+++..++.++.|++.||+|||+++++||||||+|||+++++.+||+|||+++....... ....
T Consensus 120 ~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~ 186 (290)
T cd05045 120 DERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS-------------YVKR 186 (290)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc-------------hhcc
Confidence 2478889999999999999999999999999999999999999999999999975422110 0011
Q ss_pred cccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHH
Q 000880 635 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 710 (1239)
Q Consensus 635 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~ 710 (1239)
....++..|+|||++.+ ..++.++||||||+++|||++ ||......... .... ....++.....+.++.+++.
T Consensus 187 ~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~i~ 263 (290)
T cd05045 187 SKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF-NLLK-TGYRMERPENCSEEMYNLML 263 (290)
T ss_pred cCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHh-CCCCCCCCCCCCHHHHHHHH
Confidence 22356778999999877 568999999999999999986 67554433322 2222 22222233455678999999
Q ss_pred HccCCCCCCCCCHHHHHhc
Q 000880 711 RLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 711 ~~L~~dP~~RPta~eiL~~ 729 (1239)
+||+.+|.+||++.++++.
T Consensus 264 ~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 264 TCWKQEPDKRPTFADISKE 282 (290)
T ss_pred HHccCCcccCCCHHHHHHH
Confidence 9999999999999999863
No 363
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.1e-32 Score=315.69 Aligned_cols=252 Identities=23% Similarity=0.413 Sum_probs=199.4
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCc
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
|....+||+|+||.||++.++.+|+.||||++.... ......+.+|+.+++.++||||+++++.+..
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------- 88 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLV----------- 88 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEe-----------
Confidence 333468999999999999999999999999886432 2345678999999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
....|++|||+++ +|.+++. ...+++..++.++.|++.||+|||++|++
T Consensus 89 -----------------------------~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~giv 138 (292)
T cd06657 89 -----------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVI 138 (292)
T ss_pred -----------------------------CCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3578999999975 7877664 45689999999999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
||||||+||+++.++.++|+|||++....... .......||+.|+|||++.+ ..++.++|+|||
T Consensus 139 H~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~sl 202 (292)
T cd06657 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIWSL 202 (292)
T ss_pred cCCCCHHHEEECCCCCEEEcccccceeccccc---------------ccccccccCccccCHHHhcC-CCCCchhhHHHH
Confidence 99999999999999999999999987542110 01133568999999999876 568899999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 665 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 665 GviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
|+++|+|++ ||..........................++.+.++|.+||+.||.+||++.++++|+||....
T Consensus 203 Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 203 GIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 999999996 776543333222111111111122334567899999999999999999999999999987653
No 364
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.1e-32 Score=310.42 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=197.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEcc----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.++|.+.+.||+|+||.||+|.+.. ++..||+|.+.. .........+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKD-HASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccC-CCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 3678999999999999999999985 358899998763 33444567789999999999999999999887432
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--------CCCCHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFR 569 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~~~~~~~i~~ 569 (1239)
....+++++|++ ++|.+++... ..+++..++.++.
T Consensus 81 ------------------------------------~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~ 124 (280)
T cd05043 81 ------------------------------------GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAI 124 (280)
T ss_pred ------------------------------------CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHH
Confidence 235689999996 6999988653 4588999999999
Q ss_pred HHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 000880 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 649 (1239)
Q Consensus 570 qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 649 (1239)
||+.||+|||+++++||||||+||+++.++.+||+|||+++.+...... .......++..|+|||++
T Consensus 125 ~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~-------------~~~~~~~~~~~y~apE~~ 191 (280)
T cd05043 125 QIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH-------------CLGDNENRPVKWMALESL 191 (280)
T ss_pred HHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE-------------EeCCCCCcchhccCHHHH
Confidence 9999999999999999999999999999999999999999864322100 001223467789999999
Q ss_pred cCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 000880 650 QGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 725 (1239)
Q Consensus 650 ~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 725 (1239)
.+ ..++.++|||||||++||+++ ||.......... .+. ....++.....++++.+++.+||..||++|||+.+
T Consensus 192 ~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 268 (280)
T cd05043 192 VN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA-YLK-DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQ 268 (280)
T ss_pred hc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH-HHH-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 87 568999999999999999986 676544433322 222 22222333445678999999999999999999999
Q ss_pred HHhc
Q 000880 726 LLQD 729 (1239)
Q Consensus 726 iL~~ 729 (1239)
+++.
T Consensus 269 ~~~~ 272 (280)
T cd05043 269 LVQC 272 (280)
T ss_pred HHHH
Confidence 9863
No 365
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.4e-32 Score=308.89 Aligned_cols=249 Identities=25% Similarity=0.381 Sum_probs=197.1
Q ss_pred CCceEEeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
++|+.++.||.|+||.||+|+++.+ .+.||+|.+.... .......+.+|+.+++.++||||+++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCRE---- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECC----
Confidence 5789999999999999999997643 4679999875322 22345679999999999999999999987622
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC---------CCCHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------HFDKELAWHLF 568 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------~l~~~~~~~i~ 568 (1239)
....|+||||++ ++|.+++.... .+++..++.++
T Consensus 80 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 123 (275)
T cd05046 80 ------------------------------------AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALC 123 (275)
T ss_pred ------------------------------------CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHH
Confidence 345699999997 69999997655 68999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 000880 569 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 648 (1239)
Q Consensus 569 ~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 648 (1239)
.||+.||+|||+++|+||||||+|||++.++.++|+|||++....... ........+++.|+|||.
T Consensus 124 ~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~y~~PE~ 189 (275)
T cd05046 124 TQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE--------------YYKLRNALIPLRWLAPEA 189 (275)
T ss_pred HHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccc--------------ccccCCceeEEeecChhh
Confidence 999999999999999999999999999999999999999987432111 111233467888999999
Q ss_pred ccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 000880 649 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 724 (1239)
Q Consensus 649 l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 724 (1239)
+.+ ..++.++||||||+++|+|++ ||................... +.....+..+.+++.+||+.+|.+|||+.
T Consensus 190 ~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~ 267 (275)
T cd05046 190 VQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL-PVPEGCPSRLYKLMTRCWAVNPKDRPSFS 267 (275)
T ss_pred hcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC-CCCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 887 467899999999999999985 776554444333332212111 12234557899999999999999999999
Q ss_pred HHHhc
Q 000880 725 ELLQD 729 (1239)
Q Consensus 725 eiL~~ 729 (1239)
++++.
T Consensus 268 ~~l~~ 272 (275)
T cd05046 268 ELVSA 272 (275)
T ss_pred HHHHH
Confidence 99875
No 366
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.3e-32 Score=306.67 Aligned_cols=246 Identities=22% Similarity=0.285 Sum_probs=186.8
Q ss_pred eeeccCCceEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcC
Q 000880 430 QPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 506 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~ 506 (1239)
+.||+|+||.||+|.+.. ++..||||.+... ........+.+|+.+++.++||||+++++.+...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----------- 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----------- 68 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-----------
Confidence 368999999999999753 3457999987532 2333456788999999999999999999876421
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 000880 507 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 584 (1239)
Q Consensus 507 ~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~gIi 584 (1239)
....+++|||+. ++|.+++... ...++..+..++.||+.||+|||+++++
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 120 (262)
T cd05058 69 ----------------------------EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFV 120 (262)
T ss_pred ----------------------------CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 234689999996 6999998754 3467788889999999999999999999
Q ss_pred ccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHH
Q 000880 585 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 664 (1239)
Q Consensus 585 HrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 664 (1239)
||||||+|||++.++.+||+|||+++......... ........+++.|+|||.+.+ ..++.++|||||
T Consensus 121 H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~sl 188 (262)
T cd05058 121 HRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS-----------VHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSF 188 (262)
T ss_pred ccccCcceEEEcCCCcEEECCccccccccCCccee-----------ecccccCcCCccccChhHhcc-CccchHHHHHHH
Confidence 99999999999999999999999997543211000 001123456788999999887 568999999999
Q ss_pred HHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 665 GIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 665 GviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
||++|||++ ||........... +. .+..++.....++.+.+++.+||..+|++||++.++++.
T Consensus 189 G~~l~el~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 189 GVLLWELMTRGAPPYPDVDSFDITVY-LL-QGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHH-Hh-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999986 4443333332222 22 222222223446789999999999999999999999874
No 367
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-32 Score=315.34 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=193.1
Q ss_pred CCceEEeeeccCCceEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeec
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 495 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~ 495 (1239)
++|.+.+.||+|+||.||+|++.. ....||+|.++.. ........+.+|+.+++.+ +||||+++++++..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN-ATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ- 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC-CChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-
Confidence 578899999999999999998642 3457999988643 2334456788999999999 69999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----------------CC
Q 000880 496 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DH 558 (1239)
Q Consensus 496 ~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~ 558 (1239)
...+|++|||++ ++|.+++... ..
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (314)
T cd05099 90 ---------------------------------------EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130 (314)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccc
Confidence 345799999996 6999998653 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 000880 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 638 (1239)
Q Consensus 559 l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1239)
+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++........ .......
T Consensus 131 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~ 197 (314)
T cd05099 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY-------------KKTSNGR 197 (314)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccc-------------cccccCC
Confidence 788899999999999999999999999999999999999999999999999864321100 0011223
Q ss_pred cCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccC
Q 000880 639 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 714 (1239)
Q Consensus 639 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~ 714 (1239)
+++.|||||++.+ ..++.++|||||||++|||++ ||......... ..+. ....+......+.++.++|.+||+
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (314)
T cd05099 198 LPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF-KLLR-EGHRMDKPSNCTHELYMLMRECWH 274 (314)
T ss_pred CCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHH-cCCCCCCCCCCCHHHHHHHHHHcC
Confidence 4578999999987 568999999999999999986 56544333322 2222 222222334556789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000880 715 PSPSDRPSATELLQD 729 (1239)
Q Consensus 715 ~dP~~RPta~eiL~~ 729 (1239)
.||.+|||+.++++.
T Consensus 275 ~~p~~Rps~~~ll~~ 289 (314)
T cd05099 275 AVPTQRPTFKQLVEA 289 (314)
T ss_pred CCcccCcCHHHHHHH
Confidence 999999999999863
No 368
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.4e-33 Score=312.50 Aligned_cols=235 Identities=20% Similarity=0.335 Sum_probs=183.9
Q ss_pred eeeccCCceEEEEEEEccCCc-------EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGR-------HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~-------~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+.||+|+||.||+|.++.++. .||+|.+... .....+.+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-------- 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-------- 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEe--------
Confidence 369999999999999875544 4888887532 22345678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
....++|||||+ |+|.+++.... .+++..++.++.||+.||+|||+
T Consensus 71 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 118 (258)
T cd05078 71 --------------------------------GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED 118 (258)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 235689999996 58999987644 58999999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCC--------EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 000880 581 QGIIHRDLTPNNIFFDARND--------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 652 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~--------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 652 (1239)
+||+||||||+|||++.++. ++++|||++..... .....+++.|+|||++.+.
T Consensus 119 ~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~ 179 (258)
T cd05078 119 KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP-------------------KEILLERIPWVPPECIENP 179 (258)
T ss_pred CCeecCCCccceEEEecccccccCCCceEEecccccccccCC-------------------chhccccCCccCchhccCC
Confidence 99999999999999987765 69999998864321 1234688899999999875
Q ss_pred CCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 653 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 653 ~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
..++.++|||||||++|||++ ||....... ..........+|. ..++++.+||.+||+.||++|||+.++++
T Consensus 180 ~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 180 QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-KLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-HHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 568999999999999999987 333322222 2222222223332 34468999999999999999999999987
Q ss_pred c
Q 000880 729 D 729 (1239)
Q Consensus 729 ~ 729 (1239)
.
T Consensus 256 ~ 256 (258)
T cd05078 256 D 256 (258)
T ss_pred h
Confidence 4
No 369
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.8e-32 Score=312.59 Aligned_cols=257 Identities=19% Similarity=0.318 Sum_probs=189.8
Q ss_pred CCceEEeeeccCCceEEEEEEEccC---CcEEEEEEEecCCCCchhH---------HHHHHHHHHHHhcCCCceeeeeee
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVN---------DRILREVATLSRLQHQHVVRYYQA 491 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~---------~~~~~Ev~iL~~L~HpnIv~l~~~ 491 (1239)
++|++.++||+|+||+||+|.+..+ +..+|+|+........... .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5899999999999999999999877 6778888654433221110 112334455667799999999987
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHH
Q 000880 492 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQI 571 (1239)
Q Consensus 492 ~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI 571 (1239)
+.... ....+.|++|+++..++.+.+......++..++.++.||
T Consensus 92 ~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 135 (294)
T PHA02882 92 GSFKR------------------------------------CRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDM 135 (294)
T ss_pred eeEec------------------------------------CCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHH
Confidence 63220 112356889999988888888776667899999999999
Q ss_pred HHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 000880 572 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 651 (1239)
Q Consensus 572 ~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 651 (1239)
+.||+|||+++|+||||||+|||++.++.++|+|||+|+.+........ . .........||+.|+|||++.+
T Consensus 136 ~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~--~------~~~~~~~~~gt~~y~ape~~~~ 207 (294)
T PHA02882 136 LTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIE--Y------SKEQKDLHRGTLYYAGLDAHNG 207 (294)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccc--c------ccccccccCCCccccCHHHhCC
Confidence 9999999999999999999999999999999999999986532211000 0 0011233579999999999987
Q ss_pred CCCCCcchhhHHHHHHHHHhhc---CCchhHHHHH--------HHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 000880 652 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQI--------VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 720 (1239)
Q Consensus 652 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~--------~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 720 (1239)
..++.++|||||||++|||++ ||........ ....+. .+.. .....++++.++++.||..+|.+|
T Consensus 208 -~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~r 283 (294)
T PHA02882 208 -ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLH-EGKI--KIKNANKFIYDFIECVTKLSYEEK 283 (294)
T ss_pred -CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhh-hhhh--ccCCCCHHHHHHHHHHHhCCCCCC
Confidence 568999999999999999996 8865522111 111111 1111 123345789999999999999999
Q ss_pred CCHHHHHh
Q 000880 721 PSATELLQ 728 (1239)
Q Consensus 721 Pta~eiL~ 728 (1239)
|++.++++
T Consensus 284 p~~~~l~~ 291 (294)
T PHA02882 284 PDYDALIK 291 (294)
T ss_pred CCHHHHHH
Confidence 99999975
No 370
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.8e-32 Score=311.20 Aligned_cols=260 Identities=25% Similarity=0.417 Sum_probs=203.9
Q ss_pred CceEEeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCcc
Q 000880 425 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~ 498 (1239)
+|++.+.||.|+||.||+|++. .+|..||+|+++.... .......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----- 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-----
Confidence 4788999999999999999985 4789999999874321 222345688899999999 6999999987762
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....+|+||||++ ++|.+++.....+++..+..++.||+.||.|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~ 120 (290)
T cd05613 76 -----------------------------------TDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEH 120 (290)
T ss_pred -----------------------------------cCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2356899999997 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCC
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 656 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~ 656 (1239)
||++|++||||||+|||++.++.+||+|||++........ .......|+..|+|||.+.+. ..++
T Consensus 121 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (290)
T cd05613 121 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV--------------ERAYSFCGTIEYMAPDIVRGGDGGHD 186 (290)
T ss_pred HHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc--------------cccccccCCcccCChhhccCCCCCCC
Confidence 9999999999999999999999999999999876432110 011235689999999998652 2467
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHH---HHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHH
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 725 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~e 725 (1239)
.++||||||+++|+|++ ||..... .......... ..++......+.+.+++.+||+.||.+|| ++.+
T Consensus 187 ~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~ 264 (290)
T cd05613 187 KAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADE 264 (290)
T ss_pred ccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHH
Confidence 89999999999999997 6642211 1111111111 11222234567889999999999999997 8999
Q ss_pred HHhccCCCCchHHHH
Q 000880 726 LLQDALPPQMEYELL 740 (1239)
Q Consensus 726 iL~~~~~~~~~~~~~ 740 (1239)
++.|+||....++.+
T Consensus 265 l~~~~~~~~~~~~~~ 279 (290)
T cd05613 265 IKKHPFFQKINWDDL 279 (290)
T ss_pred HHcCcccccCCHHHH
Confidence 999999999987544
No 371
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.2e-32 Score=310.03 Aligned_cols=235 Identities=16% Similarity=0.252 Sum_probs=180.2
Q ss_pred eeeccCCceEEEEEEEccC------------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 430 QPLGHGGFGHVVLCKNKLD------------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~------------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
+.||+|+||.||+|++... ...+|+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~--- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVR--- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec---
Confidence 3689999999999986422 2358889875432 2344578899999999999999999988743
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL 575 (1239)
....+++|||++ ++|..++.. ...+++..++.++.||+.||
T Consensus 76 -------------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l 118 (262)
T cd05077 76 -------------------------------------DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASAL 118 (262)
T ss_pred -------------------------------------CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 234589999997 577777764 35699999999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCCCC-------EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDARND-------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 648 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~~~-------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 648 (1239)
+|||+++|+||||||+|||++.++. ++++|||++..... .....|+..|+|||+
T Consensus 119 ~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~ 179 (262)
T cd05077 119 SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS-------------------RQECVERIPWIAPEC 179 (262)
T ss_pred HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC-------------------cccccccccccChhh
Confidence 9999999999999999999987654 89999999865321 123467889999999
Q ss_pred ccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 000880 649 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 724 (1239)
Q Consensus 649 l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 724 (1239)
+.+...++.++|||||||++|||++ ||......+.. .... ...+ ......+++.+||.+||+.||.+||++.
T Consensus 180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~--~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~ 255 (262)
T cd05077 180 VEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYE--GQCM-LVTPSCKELADLMTHCMNYDPNQRPFFR 255 (262)
T ss_pred hcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHh--cCcc-CCCCChHHHHHHHHHHcCCChhhCcCHH
Confidence 8754668999999999999999973 55443322211 1111 1111 1122346889999999999999999999
Q ss_pred HHHhc
Q 000880 725 ELLQD 729 (1239)
Q Consensus 725 eiL~~ 729 (1239)
+|+++
T Consensus 256 ~il~~ 260 (262)
T cd05077 256 AIMRD 260 (262)
T ss_pred HHHHh
Confidence 99875
No 372
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.4e-32 Score=307.08 Aligned_cols=244 Identities=25% Similarity=0.391 Sum_probs=184.3
Q ss_pred eeeccCCceEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCC
Q 000880 430 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
+.||+|+||.||+|.+. .++..+|+|.++.... ......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------------- 66 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE------------- 66 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-------------
Confidence 36899999999999875 3456899998865432 2334578899999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+|+||||++ ++|.+++.... ..++..+..++.|++.||+|||++
T Consensus 67 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 119 (269)
T cd05087 67 ---------------------------VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119 (269)
T ss_pred ---------------------------CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 245689999997 69999886432 356778889999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC------CC
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------KI 655 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~~ 655 (1239)
+++||||||+||+++.++++||+|||+++...... .........|++.|+|||++.+.. .+
T Consensus 120 ~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 186 (269)
T cd05087 120 NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED-------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQ 186 (269)
T ss_pred CEeccccCcceEEEcCCCcEEECCccccccccCcc-------------eeecCCCcCCcccccCHhHhccccccccccCC
Confidence 99999999999999999999999999987432111 011122346788999999986421 35
Q ss_pred CcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhc-CCC--CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 656 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQK-GEL--PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~-~~~--p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
+.++|||||||++|||++ ||....+.+......... ... |......++.+.++|.+|| .+|++|||+++|+.
T Consensus 187 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 187 TKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 789999999999999985 776555444332222211 111 2222234567889999999 68999999999985
No 373
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.8e-32 Score=306.71 Aligned_cols=247 Identities=24% Similarity=0.343 Sum_probs=196.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
++|.+.+.||+|+||.||+|.+... ...||||...... .....+.+.+|+.+++.++||||+++++.+..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------ 78 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------ 78 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------
Confidence 5688899999999999999998644 3468999876432 23455679999999999999999999987621
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~yL 578 (1239)
...|++|||++ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 79 -----------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l 123 (270)
T cd05056 79 -----------------------------------NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYL 123 (270)
T ss_pred -----------------------------------CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 23589999996 69999997644 589999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|++|++||||||+|||++.++.+||+|||+++....... ...+...+++.|+|||.+.+ ..++.+
T Consensus 124 H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (270)
T cd05056 124 ESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY--------------YKASKGKLPIKWMAPESINF-RRFTSA 188 (270)
T ss_pred HhCCeeccccChheEEEecCCCeEEccCceeeecccccc--------------eecCCCCccccccChhhhcc-CCCCch
Confidence 999999999999999999999999999999976532210 01122345678999999876 568999
Q ss_pred hhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 659 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 659 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+|||||||++|||++ ||......+...... ....++.+...++++.++|.+||..+|.+|||+.+++..
T Consensus 189 ~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 189 SDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999874 786665544443322 222333344567799999999999999999999999864
No 374
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.9e-32 Score=307.42 Aligned_cols=243 Identities=24% Similarity=0.384 Sum_probs=182.2
Q ss_pred eeccCCceEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 431 PLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
.||+|+||+||+|.... ....+|+|.+... ........+.+|+.+++.++||||+++++.+..
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-------------- 66 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-------------- 66 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECC--------------
Confidence 68999999999997542 3457888876532 233345678899999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
...+|+||||++ ++|.+++.... ..++..++.++.||+.||+|||++|
T Consensus 67 --------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (269)
T cd05042 67 --------------------------SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120 (269)
T ss_pred --------------------------CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 345799999996 69999987543 2467888999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC------CCCCC
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG------WPKID 656 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~~~ 656 (1239)
|+||||||+|||++.++.+||+|||++........ ........+++.|+|||++.. ...++
T Consensus 121 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 187 (269)
T cd05042 121 FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY-------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQT 187 (269)
T ss_pred EecccccHhheEecCCCcEEEeccccccccccchh-------------eeccCCCCCcccccCHHHHhhccccccccccc
Confidence 99999999999999999999999999865321110 001123356788999998743 13468
Q ss_pred cchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcC-CC--CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 657 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKG-EL--PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~-~~--p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
.++|||||||++|||++ ||....+.+.......... .. |......++...+++..|| .||++|||+++|++
T Consensus 188 ~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 188 KKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred hhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 89999999999999986 6665544444333332221 11 1122345567788999998 59999999999986
No 375
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.5e-32 Score=304.46 Aligned_cols=243 Identities=23% Similarity=0.339 Sum_probs=191.9
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
++|++.+.||+|+||.||+|.+..+ ..+|+|.+..... ....+.+|+.+++.++||||+++++++.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------- 71 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS---------- 71 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc----------
Confidence 5688999999999999999998744 4699998764332 2456889999999999999999987651
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
....|++|||++ ++|.+++.... .+++..+..++.||+.||.|||+
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~ 120 (260)
T cd05069 72 -------------------------------EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120 (260)
T ss_pred -------------------------------CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 123589999997 59999987543 47899999999999999999999
Q ss_pred CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchh
Q 000880 581 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 660 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 660 (1239)
+|++||||||+||+++.++.++|+|||+++........ ......++..|+|||++.+ ..++.++|
T Consensus 121 ~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~~~~~~y~~Pe~~~~-~~~~~~~D 185 (260)
T cd05069 121 MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT--------------ARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (260)
T ss_pred CCEeecccCcceEEEcCCCeEEECCCccceEccCCccc--------------ccCCCccchhhCCHHHhcc-CCcChHHH
Confidence 99999999999999999999999999999764321100 0112346778999999876 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 661 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 661 IwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
||||||++|||++ ||............ ... ..++.....+..+.+++++||..||.+||+++++++
T Consensus 186 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 186 VWSFGILLTELVTKGRVPYPGMVNREVLEQV-ERG-YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcC-CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999999999996 67654444333222 212 222233455678999999999999999999999875
No 376
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.7e-32 Score=313.92 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=195.2
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.++|+..+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.+++.++||||+++++.|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~---- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLS---- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC----
Confidence 4678899999999999999999987776 46888876332 22334568899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~ 576 (1239)
...+++++|++ |+|.+++.... .+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~ 123 (303)
T cd05110 81 -------------------------------------PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMM 123 (303)
T ss_pred -------------------------------------CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 12468999997 68999887644 5899999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||++||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++
T Consensus 124 ~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (303)
T cd05110 124 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-------------EYNADGGKMPIKWMALECIHY-RKFT 189 (303)
T ss_pred HHhhcCeeccccccceeeecCCCceEEccccccccccCccc-------------ccccCCCccccccCCHHHhcc-CCCC
Confidence 99999999999999999999999999999999986532110 001123456789999999887 5689
Q ss_pred cchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 657 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
.++|||||||++|||++ ||........ ...+. ....++.....+..+.+++.+||..+|++||++.++++.
T Consensus 190 ~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 190 HQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLE-KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999975 6654433222 22222 233333334456789999999999999999999999874
No 377
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.1e-32 Score=310.31 Aligned_cols=234 Identities=17% Similarity=0.259 Sum_probs=181.1
Q ss_pred eeccCCceEEEEEEEccC------------------------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCcee
Q 000880 431 PLGHGGFGHVVLCKNKLD------------------------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 486 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~~~------------------------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv 486 (1239)
.||+|+||.||+|.+..+ ...||+|++... .......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCee
Confidence 599999999999986432 235889987533 223456788999999999999999
Q ss_pred eeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHH
Q 000880 487 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELA 564 (1239)
Q Consensus 487 ~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~ 564 (1239)
++++++.+ ....|+|||||+ ++|..++.. .+.+++..+
T Consensus 80 ~~~~~~~~----------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~ 119 (274)
T cd05076 80 FVHGVCVR----------------------------------------GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWK 119 (274)
T ss_pred eEEEEEEe----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCCCHHHH
Confidence 99998743 245689999997 578888865 456899999
Q ss_pred HHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC-------CEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 000880 565 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 637 (1239)
Q Consensus 565 ~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1239)
..++.||+.||+|||++||+||||||+|||++..+ .+||+|||++..... ....
T Consensus 120 ~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~-------------------~~~~ 180 (274)
T cd05076 120 ITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS-------------------REER 180 (274)
T ss_pred HHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc-------------------cccc
Confidence 99999999999999999999999999999997643 389999998864311 1223
Q ss_pred ccCccCCCcccccCCCCCCcchhhHHHHHHHHHhh-c---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHcc
Q 000880 638 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW-H---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 713 (1239)
Q Consensus 638 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELl-t---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L 713 (1239)
.+++.|+|||.+.+...++.++|||||||++|||+ + ||......+.. .........|. ...+++.++|.+||
T Consensus 181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~li~~cl 256 (274)
T cd05076 181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEKKHRLPE---PSCKELATLISQCL 256 (274)
T ss_pred ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHhccCCCC---CCChHHHHHHHHHc
Confidence 57888999999876556899999999999999996 2 66544332221 11221222222 23468899999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 000880 714 SPSPSDRPSATELLQD 729 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~ 729 (1239)
+.+|.+|||+.+++++
T Consensus 257 ~~~p~~Rps~~~il~~ 272 (274)
T cd05076 257 TYEPTQRPSFRTILRD 272 (274)
T ss_pred ccChhhCcCHHHHHHh
Confidence 9999999999999975
No 378
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-32 Score=317.16 Aligned_cols=249 Identities=23% Similarity=0.337 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCceEEEEEEEccC-------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeec
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLD-------GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 495 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~-------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~ 495 (1239)
.+|++.+.||+|+||.||+|++... +..||+|.++.. ........+.+|+.+++++ +||||++++++|..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-
Confidence 4688999999999999999987532 236899987633 2334456789999999999 89999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC----------------C
Q 000880 496 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------H 558 (1239)
Q Consensus 496 ~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~ 558 (1239)
...+|++|||++ ++|.+++.... .
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~ 130 (334)
T cd05100 90 ---------------------------------------DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQ 130 (334)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 345799999996 59999986532 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 000880 559 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 638 (1239)
Q Consensus 559 l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1239)
++...+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........
T Consensus 131 l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~ 197 (334)
T cd05100 131 LTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY-------------YKKTTNGR 197 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc-------------cccccCCC
Confidence 77888999999999999999999999999999999999999999999999975432110 00112234
Q ss_pred cCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccC
Q 000880 639 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 714 (1239)
Q Consensus 639 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~ 714 (1239)
++..|+|||++.+ ..++.++|||||||++|||++ ||......... ..+. ....++.....+.++.++|.+||+
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (334)
T cd05100 198 LPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-KLLK-EGHRMDKPANCTHELYMIMRECWH 274 (334)
T ss_pred cCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHH-cCCCCCCCCCCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 66544333332 2222 222233334556789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000880 715 PSPSDRPSATELLQD 729 (1239)
Q Consensus 715 ~dP~~RPta~eiL~~ 729 (1239)
.+|.+|||+.+++++
T Consensus 275 ~~p~~Rps~~ell~~ 289 (334)
T cd05100 275 AVPSQRPTFKQLVED 289 (334)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999975
No 379
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=7e-32 Score=301.66 Aligned_cols=245 Identities=24% Similarity=0.407 Sum_probs=193.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|++.+.||.|+||.||+|.+. ++..+|+|.+...... ...+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTE--------- 70 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEcc---------
Confidence 57899999999999999999886 5778999988643332 3568899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
....|++|||+. ++|.+++... ..++++.++.++.|++.||+|||++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (256)
T cd05112 71 -------------------------------RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS 119 (256)
T ss_pred -------------------------------CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999996 5898888754 4689999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
+++||||||+||+++.++.+||+|||++........ .......++..|+|||++.+ ..++.++||
T Consensus 120 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv 184 (256)
T cd05112 120 NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWSSPEVFSF-SKYSSKSDV 184 (256)
T ss_pred CccccccccceEEEcCCCeEEECCCcceeecccCcc--------------cccCCCccchhhcCHhHhcc-CCcChHHHH
Confidence 999999999999999999999999999875422110 00122345678999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 662 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 662 wSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|||||++|||++ ||.......... .+..... +......+..+.+|+.+||+.+|++|||+.+++++
T Consensus 185 ~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 185 WSFGVLMWEVFSEGKTPYENRSNSEVVE-TINAGFR-LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCcCCHHHHHH-HHhCCCC-CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 999999999986 665444333222 2221111 11112245789999999999999999999999874
No 380
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.1e-32 Score=301.02 Aligned_cols=241 Identities=23% Similarity=0.326 Sum_probs=189.5
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 509 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g 509 (1239)
+.||+|+||.||+|... ++..||+|.++.. ........+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 63 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKED-LPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--------------- 63 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCc-CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec---------------
Confidence 36899999999999865 7889999988643 233344578899999999999999999987732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 510 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 510 ~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
....++||||++ ++|.+++... ..+++..++.++.|++.||.|||++|++|||
T Consensus 64 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~d 118 (250)
T cd05085 64 -------------------------RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRD 118 (250)
T ss_pred -------------------------CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 245799999996 6898888653 4589999999999999999999999999999
Q ss_pred CCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHH
Q 000880 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 667 (1239)
Q Consensus 588 LKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 667 (1239)
|||+||+++.++.+||+|||++........ .......+++.|+|||++.+ ..++.++||||||++
T Consensus 119 l~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~l 183 (250)
T cd05085 119 LAARNCLVGENNVLKISDFGMSRQEDDGIY--------------SSSGLKQIPIKWTAPEALNY-GRYSSESDVWSYGIL 183 (250)
T ss_pred cChheEEEcCCCeEEECCCccceecccccc--------------ccCCCCCCcccccCHHHhcc-CCCCchhHHHHHHHH
Confidence 999999999999999999999875321110 00112244678999999987 568999999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 668 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 668 L~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+|+|++ ||............ . ....+......++.+.+++.+||+.+|.+||++.++++.
T Consensus 184 l~~~~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 184 LWETFSLGVCPYPGMTNQQAREQV-E-KGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 999986 77655443332222 2 222222334456789999999999999999999999864
No 381
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=7.4e-32 Score=302.36 Aligned_cols=245 Identities=25% Similarity=0.361 Sum_probs=194.6
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||+|+||.||+|.+. +++.||||.+..... ...++.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSE-------- 72 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeec--------
Confidence 478999999999999999999986 568899999874433 24578999999999999999999987622
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...+|++|||++ ++|.+++.... .+++..+..++.||+.||.|||
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh 120 (261)
T cd05034 73 --------------------------------EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE 120 (261)
T ss_pred --------------------------------CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 245799999996 59999987643 6899999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++|+||||+||+++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------~~~~~~~~~~y~~PE~~~~-~~~~~~~ 185 (261)
T cd05034 121 SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT--------------AREGAKFPIKWTAPEAANY-GRFTIKS 185 (261)
T ss_pred hCCcccCCcchheEEEcCCCCEEECccccceeccchhhh--------------hhhccCCCccccCHHHhcc-CCcCchh
Confidence 999999999999999999999999999998765321100 0012234678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
|||||||++|+|++ ||.............. .. .++.....+.++.+++.+||+.+|.+||++.++++
T Consensus 186 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 186 DVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER-GY-RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99999999999996 6655444333333221 21 22222344678999999999999999999999875
No 382
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.8e-32 Score=306.20 Aligned_cols=239 Identities=23% Similarity=0.354 Sum_probs=185.5
Q ss_pred eeccCCceEEEEEEEccCCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcCC
Q 000880 431 PLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 507 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~~~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~~ 507 (1239)
.||+|+||.||+|+++.++. .+|+|.++. .........+.+|+.++.++ +||||+++++++..
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------------- 67 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------------- 67 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccc-cCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-------------
Confidence 58999999999999988776 468887752 22334456788999999999 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC----------------CCCHHHHHHHHHH
Q 000880 508 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKELAWHLFRQ 570 (1239)
Q Consensus 508 ~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~~~~~~~i~~q 570 (1239)
...+|++|||++ ++|.+++.... .+++..++.++.|
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 120 (270)
T cd05047 68 ---------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120 (270)
T ss_pred ---------------------------CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHH
Confidence 235699999996 69999986532 4788999999999
Q ss_pred HHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 000880 571 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 650 (1239)
Q Consensus 571 I~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 650 (1239)
++.||+|||++|++||||||+|||++.++.+||+|||++...... ........++.|+|||++.
T Consensus 121 i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~----------------~~~~~~~~~~~y~apE~~~ 184 (270)
T cd05047 121 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVRWMAIESLN 184 (270)
T ss_pred HHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh----------------hhccCCCCccccCChHHHc
Confidence 999999999999999999999999999999999999998632100 0011123467899999987
Q ss_pred CCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 000880 651 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 726 (1239)
Q Consensus 651 ~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 726 (1239)
+ ..++.++|||||||++|||++ ||............ . ....++.....+.++.+++.+||+.||.+|||+.++
T Consensus 185 ~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (270)
T cd05047 185 Y-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-P-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 261 (270)
T ss_pred c-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH-h-CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 6 568999999999999999985 77544333322222 1 111222233456789999999999999999999999
Q ss_pred Hhc
Q 000880 727 LQD 729 (1239)
Q Consensus 727 L~~ 729 (1239)
++.
T Consensus 262 l~~ 264 (270)
T cd05047 262 LVS 264 (270)
T ss_pred HHH
Confidence 864
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-34 Score=298.49 Aligned_cols=254 Identities=27% Similarity=0.407 Sum_probs=203.1
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
++++-+..||.|+||+|++..|+.+|+..|||.|+.... .....+++.|.....+- +.||||++||+++..|
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG------ 136 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG------ 136 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC------
Confidence 345556789999999999999999999999999986544 34567788888776555 7899999999986542
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
..||.||+|+-||..+.. +...+++...-.+...++.||.|
T Consensus 137 ----------------------------------dcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y 182 (361)
T KOG1006|consen 137 ----------------------------------DCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDY 182 (361)
T ss_pred ----------------------------------ceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence 359999999988766543 34579999999999999999999
Q ss_pred HHh-CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC-C
Q 000880 578 IHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-I 655 (1239)
Q Consensus 578 LHs-~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~ 655 (1239)
|-. ..|||||+||+|||++..|.+||||||++-.+... +..+.-.|...|||||.+..... |
T Consensus 183 LK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S----------------iAkT~daGCrpYmAPERi~p~~~gy 246 (361)
T KOG1006|consen 183 LKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS----------------IAKTVDAGCRPYMAPERIDPSDKGY 246 (361)
T ss_pred HHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH----------------HHhhhccCCccccChhccCCccCCc
Confidence 986 47999999999999999999999999999876422 12244578999999999876544 9
Q ss_pred CcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCC-----CccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 000880 656 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLMSPSPSDRPSATELL 727 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 727 (1239)
+-++|+|||||+|||+.| |+..++..-..+..+. .+..| ....+.+..+..+|..||.+|-++||...+++
T Consensus 247 DiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv-~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk 325 (361)
T KOG1006|consen 247 DIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV-IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLK 325 (361)
T ss_pred chhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH-cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhh
Confidence 999999999999999998 7777766433333322 22222 12234567899999999999999999999999
Q ss_pred hccCCCCc
Q 000880 728 QDALPPQM 735 (1239)
Q Consensus 728 ~~~~~~~~ 735 (1239)
.++|..-.
T Consensus 326 ~~~fyr~y 333 (361)
T KOG1006|consen 326 KFPFYRMY 333 (361)
T ss_pred cCchhhhh
Confidence 99876544
No 384
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-33 Score=315.21 Aligned_cols=244 Identities=23% Similarity=0.318 Sum_probs=201.7
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+.....+||-|.||.||.|.|+.-...||||.++- +.-..++|+.|..+|+.++|||+|+++|+|.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT----------- 333 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----------- 333 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhc-----------
Confidence 55667899999999999999999999999998862 2234678999999999999999999999983
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...-+|||+|||. |+|.++|++..+ ++.-..+.++.||.+||+||..+
T Consensus 334 -----------------------------~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk 384 (1157)
T KOG4278|consen 334 -----------------------------HEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK 384 (1157)
T ss_pred -----------------------------cCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh
Confidence 2456899999985 899999987654 77777889999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
++|||||..+|+|+.++..|||+|||+++++...... .+-+..-..-|.|||-|.- ..++.|+||
T Consensus 385 nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT--------------AHAGAKFPIKWTAPEsLAy-NtFSiKSDV 449 (1157)
T KOG4278|consen 385 NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT--------------AHAGAKFPIKWTAPESLAY-NTFSIKSDV 449 (1157)
T ss_pred hhhhhhhhhhhccccccceEEeeccchhhhhcCCcee--------------cccCccCcccccCcccccc-cccccchhh
Confidence 9999999999999999999999999999987543211 1112233457999998876 679999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 662 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 662 wSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
|+|||+|||+.| |+.+..-.++ .. +..++.......++++....||+.||+.+|.+||++.+|-+
T Consensus 450 WAFGVLLWEIATYGMsPYPGidlSqV-Y~-LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 450 WAFGVLLWEIATYGMSPYPGIDLSQV-YG-LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHHHHHHHHHHhcCCCCCCCccHHHH-HH-HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 999999999986 7655443332 22 33456666667788999999999999999999999999865
No 385
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=8.4e-32 Score=305.52 Aligned_cols=247 Identities=25% Similarity=0.371 Sum_probs=195.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
.+|++.+.||+|+||.||+|.++.+|. .||+|.+... ........+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREE-TSPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 578999999999999999999887765 5899987643 233445678999999999999999999988731
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~y 577 (1239)
...+++|||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 81 ------------------------------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 124 (279)
T cd05057 81 ------------------------------------SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSY 124 (279)
T ss_pred ------------------------------------CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 35689999996 6999988764 469999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++|++||||||+|||++.++.+||+|||+++....... ........++..|+|||.+.. ..++.
T Consensus 125 LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (279)
T cd05057 125 LEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK-------------EYHAEGGKVPIKWMALESILH-RIYTH 190 (279)
T ss_pred HHhCCEEecccCcceEEEcCCCeEEECCCcccccccCccc-------------ceecCCCcccccccCHHHhhc-CCcCc
Confidence 9999999999999999999999999999999986532110 001112234678999999876 56899
Q ss_pred chhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 658 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
++|+|||||++||+++ ||......+.... +. .....+.....+.++.+++.+||..||..||++.++++
T Consensus 191 ~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 191 KSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDL-LE-KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH-Hh-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9999999999999986 6655444333322 22 22222223345578999999999999999999999975
No 386
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.3e-32 Score=304.42 Aligned_cols=233 Identities=19% Similarity=0.305 Sum_probs=183.4
Q ss_pred eeeccCCceEEEEEEEccCC----------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 430 QPLGHGGFGHVVLCKNKLDG----------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g----------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
+.||+|+||.||+|.+..++ ..+++|.+...... ...+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR----- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-----
Confidence 36899999999999998776 35888876543221 5678999999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~y 577 (1239)
...++||||++ ++|.+++.... .+++..+..++.||+.||+|
T Consensus 73 ------------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 116 (259)
T cd05037 73 ------------------------------------DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHY 116 (259)
T ss_pred ------------------------------------CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 23489999996 68999988665 79999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCC-------CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 650 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 650 (1239)
||++||+||||||+|||++.++ .+||+|||++..... .....++..|+|||++.
T Consensus 117 LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-------------------~~~~~~~~~y~aPE~~~ 177 (259)
T cd05037 117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-------------------REERVERIPWIAPECIR 177 (259)
T ss_pred HhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc-------------------ccccccCCCccChhhhc
Confidence 9999999999999999999887 799999999986421 12235677899999998
Q ss_pred CC-CCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 000880 651 GW-PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 725 (1239)
Q Consensus 651 ~~-~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 725 (1239)
+. ..++.++|||||||++|||++ ||......... .........+.. ....+.++|.+||..+|.+|||+.+
T Consensus 178 ~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rpt~~~ 253 (259)
T cd05037 178 NGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE-RFYQDQHRLPMP---DCAELANLINQCWTYDPTKRPSFRA 253 (259)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH-HHHhcCCCCCCC---CchHHHHHHHHHhccChhhCCCHHH
Confidence 74 368999999999999999985 45443222211 111112222211 1268899999999999999999999
Q ss_pred HHhc
Q 000880 726 LLQD 729 (1239)
Q Consensus 726 iL~~ 729 (1239)
+++.
T Consensus 254 il~~ 257 (259)
T cd05037 254 ILRD 257 (259)
T ss_pred HHHh
Confidence 9864
No 387
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=8.2e-32 Score=300.47 Aligned_cols=245 Identities=25% Similarity=0.348 Sum_probs=195.3
Q ss_pred ceEEeeeccCCceEEEEEEEccCC----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
|++.+.||.|+||.||+|.+..++ ..||+|+++... .......+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------- 72 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTE------- 72 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-------
Confidence 356689999999999999998766 899999986432 22245688999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~~~~~~~i~~qI~~gL~yL 578 (1239)
....|++|||++ ++|.+++..... +++..++.++.||+.||+||
T Consensus 73 ---------------------------------~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l 119 (258)
T smart00219 73 ---------------------------------EEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL 119 (258)
T ss_pred ---------------------------------CCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 246899999996 599999876544 99999999999999999999
Q ss_pred HhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 579 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|++|++||||||+||+++.++.++|+|||+++........ ......+++.|+|||.+.+ ..++.+
T Consensus 120 h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~~~~~~y~~Pe~~~~-~~~~~~ 184 (258)
T smart00219 120 ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY--------------KKKGGKLPIRWMAPESLKD-GKFTSK 184 (258)
T ss_pred hcCCeeecccccceEEEccCCeEEEcccCCceeccccccc--------------ccccCCCcccccChHHhcc-CCCCcc
Confidence 9999999999999999999999999999999865322110 0011237889999999866 678999
Q ss_pred hhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 659 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 659 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
+||||||+++|+|++ ||............ . ....++.....+.++.+++.+||+.||.+|||+.++++
T Consensus 185 ~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 185 SDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYL-K-KGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999985 55543333332222 2 22233333446778999999999999999999999986
No 388
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=9.8e-32 Score=299.54 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=190.0
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 509 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g 509 (1239)
++||.|+||.||+|.+.. ++.||+|.+...... .....+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------------- 63 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--------------- 63 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEec---------------
Confidence 369999999999999986 999999988754332 345679999999999999999999987632
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 000880 510 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 587 (1239)
Q Consensus 510 ~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrD 587 (1239)
....|++|||++ ++|.+++.. ...++...+..++.|++.||+|||+++++|||
T Consensus 64 -------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 118 (251)
T cd05041 64 -------------------------KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD 118 (251)
T ss_pred -------------------------CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence 345799999996 589998865 34688999999999999999999999999999
Q ss_pred CCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHH
Q 000880 588 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 667 (1239)
Q Consensus 588 LKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 667 (1239)
|||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++.++|+|||||+
T Consensus 119 i~p~nili~~~~~~~l~d~g~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 184 (251)
T cd05041 119 LAARNCLVGENNVLKISDFGMSREEEGGIY-------------TVSDGLKQIPIKWTAPEALNY-GRYTSESDVWSYGIL 184 (251)
T ss_pred cCcceEEEcCCCcEEEeeccccccccCCcc-------------eeccccCcceeccCChHhhcc-CCCCcchhHHHHHHH
Confidence 999999999999999999999975431110 001112234677999999887 568999999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 668 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 668 L~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+|||++ ||........... +. ....++.....+.++.++|.+||..+|.+|||+.++++.
T Consensus 185 ~~~l~t~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 185 LWETFSLGDTPYPGMSNQQTRER-IE-SGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred HHHHHhccCCCCccCCHHHHHHH-Hh-cCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 999996 5654443322222 21 111222233456789999999999999999999999864
No 389
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=5.3e-32 Score=303.55 Aligned_cols=249 Identities=29% Similarity=0.452 Sum_probs=195.7
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecC---CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~---~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
+|.+.+.||+|+||.||++++..++..+++|+++.. .........+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 73 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE------- 73 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-------
Confidence 478889999999999999999888777777776532 2222334567789999999999999999987632
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~qI~~gL~ 576 (1239)
....+++|||++ ++|.+++.. ...+++..++.++.|++.||.
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (260)
T cd08222 74 ---------------------------------RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120 (260)
T ss_pred ---------------------------------CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHH
Confidence 345799999997 588887753 356999999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
|||++|++|+||||+||+++. +.+||+|||++........ ......|++.|+|||.+.+ ..++
T Consensus 121 ~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~-~~~~ 183 (260)
T cd08222 121 YMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD---------------LATTFTGTPYYMSPEALKH-QGYD 183 (260)
T ss_pred HHHHcCccccCCChhheEeec-CCEeecccCceeecCCCcc---------------cccCCCCCcCccCHHHHcc-CCCC
Confidence 999999999999999999975 6799999999876432110 1123468899999999876 5688
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
.++|+||||+++|+|++ ||............. .+..+......++++.++|.+||..||++||++.++++|||+
T Consensus 184 ~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 184 SKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV--EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH--cCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 89999999999999986 665444333333322 223333333456789999999999999999999999999996
No 390
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=9.1e-32 Score=306.70 Aligned_cols=259 Identities=28% Similarity=0.432 Sum_probs=202.0
Q ss_pred CceEEeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCcc
Q 000880 425 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~ 498 (1239)
+|++.+.||+|+||.||++++. .++..||||+++.... .......+.+|+.++..+ +||||+++++++.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~----- 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ----- 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-----
Confidence 4788999999999999999864 4678999999874322 122345688999999999 6999999987762
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....+|+||||++ ++|.+++.....+++..++.++.|++.||.|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~ 120 (288)
T cd05583 76 -----------------------------------TDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDH 120 (288)
T ss_pred -----------------------------------cCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHH
Confidence 2356899999996 5999998877789999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-CCC
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KID 656 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~ 656 (1239)
||+.+++||||||.||+++.++.++|+|||+++...... ........|++.|+|||.+.+.. ..+
T Consensus 121 lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (288)
T cd05583 121 LHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE--------------EERAYSFCGTIEYMAPEVIRGGSGGHD 186 (288)
T ss_pred HHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc--------------ccccccccCCccccCHHHhcCCCCCCc
Confidence 999999999999999999999999999999987643211 00112346899999999987632 368
Q ss_pred cchhhHHHHHHHHHhhc---CCchhH----HHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC---HHHH
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATEL 726 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt---a~ei 726 (1239)
.++|+||||+++|||++ ||.... ............ ++......+.+.++|.+||+.||++||| +.++
T Consensus 187 ~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~ 263 (288)
T cd05583 187 KAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK---PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEI 263 (288)
T ss_pred chhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC---CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHH
Confidence 89999999999999997 664221 111111222211 2222345578999999999999999998 5677
Q ss_pred HhccCCCCchHHHH
Q 000880 727 LQDALPPQMEYELL 740 (1239)
Q Consensus 727 L~~~~~~~~~~~~~ 740 (1239)
|+|+|+.+..++.+
T Consensus 264 l~~~~~~~~~~~~~ 277 (288)
T cd05583 264 KNHPFFQGIDWDDL 277 (288)
T ss_pred hcCcccccCCHHHH
Confidence 99999999887543
No 391
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-31 Score=303.14 Aligned_cols=244 Identities=21% Similarity=0.363 Sum_probs=182.7
Q ss_pred eeccCCceEEEEEEEccCC--cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 431 PLGHGGFGHVVLCKNKLDG--RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~~~g--~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
.||+|+||.||+|.+..++ ..+++|.+... ........+.+|+.+++.++||||+++++.|..
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-------------- 66 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN-ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-------------- 66 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC-CChHHHHHHHHHHHHHhccCCcchhheEEEecC--------------
Confidence 5999999999999865332 34667766533 223345689999999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....|+|||||+ ++|.+++... ..++...++.++.||+.||+|||++++
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 120 (268)
T cd05086 67 --------------------------AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF 120 (268)
T ss_pred --------------------------CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence 345799999997 6999998753 346677888999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC------CCCCc
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW------PKIDE 657 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~~~~~ 657 (1239)
+||||||+|||++.++.+||+|||++........ .......+|++.|+|||++... ..++.
T Consensus 121 ~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 187 (268)
T cd05086 121 LHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY-------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTK 187 (268)
T ss_pred eccCCccceEEEcCCccEEecccccccccCcchh-------------hhcccCCcCcccccCchhcccccCccccCCCCC
Confidence 9999999999999999999999999864211100 0112345788999999987531 23578
Q ss_pred chhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCC---CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 658 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGE---LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~---~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
++|||||||++|||++ ||....+.+.....+..... .|.......+.+.+++..|| .+|++||++.++++.
T Consensus 188 ~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 188 PSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred cchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 9999999999999984 77655544444333322211 12222334567889999999 679999999999763
No 392
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=9.3e-32 Score=303.61 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=193.3
Q ss_pred ceEEeeeccCCceEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
|.+.+.||+|+||.||+|.++. +++.||||++...........++.+|+.+++.++||||+++++.+.....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----- 75 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRA----- 75 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCC-----
Confidence 5667899999999999998753 57899999997655455556778999999999999999999987743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~~~~~~~i~~qI~~gL 575 (1239)
.......+++++|+. ++|.+++... ..++...++.++.||+.||
T Consensus 76 -----------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l 126 (273)
T cd05074 76 -----------------------------KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126 (273)
T ss_pred -----------------------------CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 001234578899996 6888776422 2478899999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 655 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 655 (1239)
+|||++||+||||||+||+++.++.+||+|||+++....... ........+++.|++||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05074 127 EYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY-------------YRQGCASKLPVKWLALESLAD-NVY 192 (273)
T ss_pred HHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcc-------------eecCCCccCchhhcCHhHHhc-Ccc
Confidence 999999999999999999999999999999999986532110 001122346678999999887 568
Q ss_pred CcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 656 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
+.++|||||||++|||++ ||.............. ...+......++.+.+++.+||+.+|++|||+.+++++
T Consensus 193 ~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK--GNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred chhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 899999999999999985 5554433333222221 12222223456789999999999999999999999875
No 393
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=6.7e-32 Score=300.22 Aligned_cols=242 Identities=32% Similarity=0.473 Sum_probs=198.3
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCc
Q 000880 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 510 (1239)
Q Consensus 432 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~ 510 (1239)
||.|+||.||++.+..+++.||+|+++..... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----------------- 63 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ----------------- 63 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-----------------
Confidence 69999999999999988999999998754332 224567889999999999999999987762
Q ss_pred ccccccccccccccccccccccccccEEEEEeecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 000880 511 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 589 (1239)
Q Consensus 511 ~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLK 589 (1239)
....+|++|||+ +++|.+++.....+++..++.++.||+.||.|||+++++|+|||
T Consensus 64 -----------------------~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~ 120 (250)
T cd05123 64 -----------------------TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120 (250)
T ss_pred -----------------------cCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 246789999999 57999999888789999999999999999999999999999999
Q ss_pred cccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHH
Q 000880 590 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 669 (1239)
Q Consensus 590 p~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 669 (1239)
|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ...+.++|+||||+++|
T Consensus 121 p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~ 184 (250)
T cd05123 121 PENILLDADGHIKLTDFGLAKELSSEG---------------SRTNTFCGTPEYLAPEVLLG-KGYGKAVDWWSLGVLLY 184 (250)
T ss_pred cceEEEcCCCcEEEeecCcceecccCC---------------CcccCCcCCccccChHHhCC-CCCCchhhHHHHHHHHH
Confidence 999999999999999999997643211 01133568899999999887 45788999999999999
Q ss_pred Hhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH---HHHHhccCC
Q 000880 670 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALP 732 (1239)
Q Consensus 670 ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta---~eiL~~~~~ 732 (1239)
+|++ ||...................| ...+..+.++|++||..||++||++ .++++||||
T Consensus 185 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 185 EMLTGKPPFYAEDRKEIYEKILKDPLRFP---EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9996 7755544333333332222222 2335688999999999999999999 999999997
No 394
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=6.8e-32 Score=306.12 Aligned_cols=253 Identities=28% Similarity=0.432 Sum_probs=195.3
Q ss_pred CCceEEeeeccCCceEEEEEEEcc----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~ 499 (1239)
.+|++.+.||+|+||.||+|.+.. ++..||||+++..... .....+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---- 78 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKP---- 78 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecC----
Confidence 467888999999999999999753 4789999998754433 3467899999999999999999999876321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~~~~~~~i~~qI~~gL~y 577 (1239)
.....+++|||++ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 79 ----------------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~ 124 (284)
T cd05038 79 ----------------------------------GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDY 124 (284)
T ss_pred ----------------------------------CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHH
Confidence 1356799999996 59999987654 59999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||++|++||||||+|||++.++.++|+|||++......... ........++..|+|||.+.+ ..++.
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~Pe~~~~-~~~~~ 191 (284)
T cd05038 125 LGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY------------YYVKEPGESPIFWYAPECLRT-SKFSS 191 (284)
T ss_pred HHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcc------------eeccCCCCCcccccCcHHHcc-CCCCc
Confidence 99999999999999999999999999999999865321100 000112345667999999877 46889
Q ss_pred chhhHHHHHHHHHhhc---CCchhHHHH--------------HHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 000880 658 KADMYSLGIVFFELWH---PFSTAMERQ--------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 720 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt---Pf~~~~~~~--------------~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 720 (1239)
++|||||||++|||++ ||....... .....+. .....+.....+.++.+++.+||+.+|.+|
T Consensus 192 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 270 (284)
T cd05038 192 ASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK-EGERLPRPPSCPDEVYDLMKLCWEAEPQDR 270 (284)
T ss_pred ccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH-cCCcCCCCccCCHHHHHHHHHHhccChhhC
Confidence 9999999999999997 544321111 1111111 222222233455789999999999999999
Q ss_pred CCHHHHHhc
Q 000880 721 PSATELLQD 729 (1239)
Q Consensus 721 Pta~eiL~~ 729 (1239)
||+.++++.
T Consensus 271 pt~~ei~~~ 279 (284)
T cd05038 271 PSFADLILI 279 (284)
T ss_pred CCHHHHHHH
Confidence 999999864
No 395
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.98 E-value=9.9e-32 Score=300.47 Aligned_cols=239 Identities=24% Similarity=0.377 Sum_probs=190.8
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+++|++.+.||+|+||.||++.. +++.||+|+++... ....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------- 70 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILH-------- 70 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--------
Confidence 36799999999999999999874 68899999886422 24578899999999999999999987622
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...|++|||++ ++|.+++.... .+++..++.++.|++.||.|||
T Consensus 71 ---------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH 117 (254)
T cd05083 71 ---------------------------------NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE 117 (254)
T ss_pred ---------------------------------CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22589999996 59999987543 4889999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
++|++||||||+||+++.++.+||+|||++...... ......+..|+|||.+.+ ..++.++
T Consensus 118 ~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~------------------~~~~~~~~~y~~pe~~~~-~~~~~~~ 178 (254)
T cd05083 118 SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG------------------VDNSKLPVKWTAPEALKH-KKFSSKS 178 (254)
T ss_pred hCCeeccccCcceEEEcCCCcEEECCCccceecccc------------------CCCCCCCceecCHHHhcc-CCcCchh
Confidence 999999999999999999999999999998753211 011234568999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|||||||++|||++ ||......+.... .. ....++.....++.+.+++.+||+.+|.+||++.+++..
T Consensus 179 Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 179 DVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC-VE-KGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred hHHHHHHHHHHHHhCCCCCCccCCHHHHHHH-Hh-CCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999985 6655444333222 22 222222334556789999999999999999999999863
No 396
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4e-32 Score=324.52 Aligned_cols=259 Identities=22% Similarity=0.385 Sum_probs=213.7
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+-|++.++||.|.+|+||+++++.+|+.+|||+..... +..+++..|.++|+.+ .|||++.+||+|.-..
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~------ 89 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD------ 89 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEEec------
Confidence 56899999999999999999999999999999886433 3345677889999888 7999999999985431
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
......+|+|||||+ ||.-+++.. ..++.|+.+..|++.++.|+.|||
T Consensus 90 -----------------------------~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH 140 (953)
T KOG0587|consen 90 -----------------------------PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH 140 (953)
T ss_pred -----------------------------CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh
Confidence 134678999999996 688888764 456999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC----CC
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----KI 655 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~~ 655 (1239)
.+.++|||||-.|||++.++.|||+|||.+..+... .....+.+|||.|||||++...+ .|
T Consensus 141 ~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT---------------~grRnT~iGtP~WMAPEViac~e~~d~ty 205 (953)
T KOG0587|consen 141 NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST---------------VGRRNTFIGTPYWMAPEVIACDESPDATY 205 (953)
T ss_pred hcceeeecccCceEEEeccCcEEEeeeeeeeeeecc---------------cccccCcCCCcccccceeeecccCCCCCc
Confidence 999999999999999999999999999999876321 12345679999999999986533 47
Q ss_pred CcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 656 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 656 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
+..+|+|||||+..||.- |+.+.+++-.++.+.+..+.-...+...+.++.++|..||.+|-.+||+..++|+|||.
T Consensus 206 d~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi 285 (953)
T KOG0587|consen 206 DYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFI 285 (953)
T ss_pred ccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcc
Confidence 889999999999999984 78888877776665543222222344455688999999999999999999999999998
Q ss_pred CCc
Q 000880 733 PQM 735 (1239)
Q Consensus 733 ~~~ 735 (1239)
...
T Consensus 286 ~e~ 288 (953)
T KOG0587|consen 286 TEQ 288 (953)
T ss_pred ccc
Confidence 743
No 397
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.98 E-value=1.9e-32 Score=312.98 Aligned_cols=249 Identities=24% Similarity=0.323 Sum_probs=198.2
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
.+.+.++||+|-||+|.+|.-. .+..||||+++.... ......|.+|+++|.+|+|||||+++|+|..
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~---------- 606 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQ---------- 606 (807)
T ss_pred heehhhhhcCcccceeEEEEec-CceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeec----------
Confidence 4567789999999999999876 468999999874333 3345789999999999999999999999954
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
+..++++|||+. |+|.+++... .....+...+++.||+.||+||.+.
T Consensus 607 ------------------------------DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~ 656 (807)
T KOG1094|consen 607 ------------------------------DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL 656 (807)
T ss_pred ------------------------------CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh
Confidence 345789999995 8999999876 3345667788999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 661 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 661 (1239)
++|||||.+.|||++.++++||+|||+++-+...... .-....+-...|||||.+.. ++++.++|+
T Consensus 657 nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy-------------~vqgr~vlpiRwmawEsill-gkFttaSDv 722 (807)
T KOG1094|consen 657 NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY-------------RVQGRAVLPIRWMAWESILL-GKFTTASDV 722 (807)
T ss_pred chhhccccccceeecCcccEEecCcccccccccCCce-------------eeecceeeeeeehhHHHHHh-ccccchhhh
Confidence 9999999999999999999999999999965322211 01122356789999998765 679999999
Q ss_pred HHHHHHHHHhhc-----CCchhHHHHHHHHhhh---hcC--CCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 662 YSLGIVFFELWH-----PFSTAMERQIVLSDLK---QKG--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 662 wSlGviL~ELlt-----Pf~~~~~~~~~~~~~~---~~~--~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|+||+++||+++ ||....+.+.....-. ..+ ..++.+.-++..+.++|.+||..|-.+||+++++..+
T Consensus 723 WafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 723 WAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred hhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 999999999984 9988777665543211 111 1223333455688999999999999999999998654
No 398
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.98 E-value=3.2e-31 Score=297.63 Aligned_cols=244 Identities=25% Similarity=0.349 Sum_probs=193.2
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|++.+.||+|+||.||++.+. .+..+|+|.+.... .....+.+|+.+++.++|+||+++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 72 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-------- 72 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC--------
Confidence 478999999999999999999865 56779999876322 234678899999999999999999877621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
...|++|||++ ++|.+++... ..+++..++.++.||+.||.|||
T Consensus 73 ---------------------------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH 119 (260)
T cd05073 73 ---------------------------------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 119 (260)
T ss_pred ---------------------------------CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 34689999996 6999998753 35788899999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+.|++||||||+||+++.++.+||+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~ 184 (260)
T cd05073 120 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 184 (260)
T ss_pred hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc--------------ccccCCcccccccCHhHhcc-CCcCccc
Confidence 99999999999999999999999999999976432110 01122346678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
|+|||||++|++++ ||........... +. .....+.....+.++.+++.+||+.+|++||++.++++
T Consensus 185 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 185 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LE-RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred cchHHHHHHHHHHhcCCCCCCCCCHHHHHHH-Hh-CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999996 7765443333222 22 22222333456678999999999999999999998875
No 399
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.98 E-value=1.3e-31 Score=301.86 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=187.9
Q ss_pred eeccCCceEEEEEEEccCC------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 431 PLGHGGFGHVVLCKNKLDG------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~~~g------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
.||+|+||.||+|+++... +.||||.+... ........+.+|+.+++.++||||++++++|..
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL---------- 70 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC----------
Confidence 5899999999999987543 68999988643 222345678899999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHH
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQIVEGLA 576 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~~~~~~~i~~qI~~gL~ 576 (1239)
....|++|||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (269)
T cd05044 71 ------------------------------NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120 (269)
T ss_pred ------------------------------CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence 245799999996 6999988642 33788999999999999999
Q ss_pred HHHhCCccccCCCcccEEEcCCC-----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 000880 577 HIHGQGIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 651 (1239)
Q Consensus 577 yLHs~gIiHrDLKp~NILl~~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 651 (1239)
|||+++++|+||||+|||++.++ .++|+|||+++........ .......++..|+|||++.+
T Consensus 121 ~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~ 187 (269)
T cd05044 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYY-------------RKEGEGLLPVRWMAPESLLD 187 (269)
T ss_pred HHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccccccccc-------------ccCcccCCCccccCHHHHcc
Confidence 99999999999999999999877 8999999999765322110 01122356788999999987
Q ss_pred CCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 000880 652 WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 727 (1239)
Q Consensus 652 ~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 727 (1239)
..++.++|||||||++|||++ ||......+..... . ....+......++.+.++|.+||..+|.+||++.+++
T Consensus 188 -~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 264 (269)
T cd05044 188 -GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-T-AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQ 264 (269)
T ss_pred -CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-h-cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 568999999999999999985 66544443332222 2 1222233344567889999999999999999999997
Q ss_pred hc
Q 000880 728 QD 729 (1239)
Q Consensus 728 ~~ 729 (1239)
+.
T Consensus 265 ~~ 266 (269)
T cd05044 265 EI 266 (269)
T ss_pred HH
Confidence 53
No 400
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.98 E-value=3.4e-31 Score=298.59 Aligned_cols=247 Identities=30% Similarity=0.512 Sum_probs=194.1
Q ss_pred CceEEeeeccCCceEEEEEEEcc-CCcEEEEEEEecCC--------CCchhHHHHHHHHHHHHh-cCCCceeeeeeeeee
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKD--------KSLPVNDRILREVATLSR-LQHQHVVRYYQAWFE 494 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~--------~~~~~~~~~~~Ev~iL~~-L~HpnIv~l~~~~~e 494 (1239)
+|++.+.||+|+||.||+|.++. +++.+|+|.+.... .......++.+|+.+++. ++||||+++++.+.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999999987 68899999986432 122234567889988875 799999999988732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh----cCCCCHHHHHHHHH
Q 000880 495 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFR 569 (1239)
Q Consensus 495 ~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~~~~~~~i~~ 569 (1239)
....|++|||++ ++|.+++.. ...+++..++.++.
T Consensus 81 ----------------------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 120 (269)
T cd08528 81 ----------------------------------------NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120 (269)
T ss_pred ----------------------------------------CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 356899999996 488887743 34689999999999
Q ss_pred HHHHHHHHHHh-CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 000880 570 QIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 648 (1239)
Q Consensus 570 qI~~gL~yLHs-~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 648 (1239)
|++.||.|||+ .+++|+||||+|||++.++.+||+|||++....... ......|+..|+|||.
T Consensus 121 ~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~Pe~ 184 (269)
T cd08528 121 QMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES----------------KLTSVVGTILYSCPEI 184 (269)
T ss_pred HHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc----------------ccccccCcccCcChhh
Confidence 99999999996 789999999999999999999999999997643211 1234568999999999
Q ss_pred ccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 000880 649 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 725 (1239)
Q Consensus 649 l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 725 (1239)
+.+ ..++.++|+||||+++|+|++ ||.............. ....|......++++.++|.+||+.||++||++.+
T Consensus 185 ~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 262 (269)
T cd08528 185 VKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE-AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQ 262 (269)
T ss_pred hcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh-ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence 987 568999999999999999996 7655443333222221 21122222245678999999999999999999999
Q ss_pred HHhc
Q 000880 726 LLQD 729 (1239)
Q Consensus 726 iL~~ 729 (1239)
+..+
T Consensus 263 ~~~~ 266 (269)
T cd08528 263 VSAM 266 (269)
T ss_pred HHHH
Confidence 9764
No 401
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=5.7e-32 Score=302.63 Aligned_cols=263 Identities=25% Similarity=0.381 Sum_probs=196.8
Q ss_pred CCCCCCCCCCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHh--cCCCceeee
Q 000880 411 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRY 488 (1239)
Q Consensus 411 ~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--L~HpnIv~l 488 (1239)
++....+.......+..+++.||+|.||+||+|+|+ |+.||||++...+ .....||.++... |+|+||+.+
T Consensus 198 GSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgF 270 (513)
T KOG2052|consen 198 GSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGF 270 (513)
T ss_pred CCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhh
Confidence 333333344445578889999999999999999998 9999999997443 3446677777655 499999998
Q ss_pred eeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHH
Q 000880 489 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHL 567 (1239)
Q Consensus 489 ~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i 567 (1239)
+++ .++++|+ -..+|+|++|.+ |||.|+|.. ..++.+...++
T Consensus 271 Iaa------------D~~~~gs------------------------~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~L 313 (513)
T KOG2052|consen 271 IAA------------DNKDNGS------------------------WTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKL 313 (513)
T ss_pred hhc------------cccCCCc------------------------eEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHH
Confidence 855 2333332 367999999996 899999987 67999999999
Q ss_pred HHHHHHHHHHHHhC--------CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 000880 568 FRQIVEGLAHIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 639 (1239)
Q Consensus 568 ~~qI~~gL~yLHs~--------gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 639 (1239)
+..++.||+|||-. .|.|||||+.|||+..++.+.|+|+|+|-..... +.......+..+|
T Consensus 314 alS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~-----------t~~idi~~N~rVG 382 (513)
T KOG2052|consen 314 ALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD-----------TDTIDIPPNPRVG 382 (513)
T ss_pred HHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc-----------CCcccCCCCCccc
Confidence 99999999999952 4999999999999999999999999999764322 1223344567899
Q ss_pred CccCCCcccccCCCC---C--CcchhhHHHHHHHHHhh-------------cCCchhHHH----HHHHH---hhhhcCCC
Q 000880 640 TYFYTAPEIEQGWPK---I--DEKADMYSLGIVFFELW-------------HPFSTAMER----QIVLS---DLKQKGEL 694 (1239)
Q Consensus 640 T~~Y~APE~l~~~~~---~--~~ksDIwSlGviL~ELl-------------tPf~~~~~~----~~~~~---~~~~~~~~ 694 (1239)
|.+|||||+|...-. + -..+||||||.++||+. .||.+..+. +...+ ..+..+.+
T Consensus 383 TKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~i 462 (513)
T KOG2052|consen 383 TKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNI 462 (513)
T ss_pred eeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCC
Confidence 999999999875211 1 14689999999999996 177644221 11111 12223445
Q ss_pred CCccccCC--HHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 695 PPSWVAKF--SEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 695 p~~~~~~~--~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
|..|.... ..+.++|+.||..||..|.|+-.|-+
T Consensus 463 pnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK 498 (513)
T KOG2052|consen 463 PNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK 498 (513)
T ss_pred CcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence 55555432 25678999999999999999887754
No 402
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.8e-31 Score=295.86 Aligned_cols=228 Identities=21% Similarity=0.300 Sum_probs=179.2
Q ss_pred CCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCccccc
Q 000880 435 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 514 (1239)
Q Consensus 435 G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~~~s~ 514 (1239)
|.||.||+|+++.+|+.||+|+++... .+.+|...+....||||+++++++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------- 56 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVS-------------------- 56 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheec--------------------
Confidence 899999999999999999999987432 23345555666689999999987632
Q ss_pred ccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccE
Q 000880 515 TFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 593 (1239)
Q Consensus 515 ~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NI 593 (1239)
....|++|||++ ++|.+++.....+++..+..++.|++.||+|||++||+||||||+||
T Consensus 57 --------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Ni 116 (237)
T cd05576 57 --------------------EDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNI 116 (237)
T ss_pred --------------------CCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHE
Confidence 356899999996 59999998877899999999999999999999999999999999999
Q ss_pred EEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc
Q 000880 594 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH 673 (1239)
Q Consensus 594 Ll~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt 673 (1239)
+++.++.++|+|||++...... ..+..++..|+|||++.+ ..++.++|+||+||++|||++
T Consensus 117 l~~~~~~~~l~df~~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~ 177 (237)
T cd05576 117 LLDDRGHIQLTYFSRWSEVEDS------------------CDGEAVENMYCAPEVGGI-SEETEACDWWSLGAILFELLT 177 (237)
T ss_pred EEcCCCCEEEecccchhccccc------------------cccCCcCccccCCcccCC-CCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999988654211 122356778999999876 568899999999999999997
Q ss_pred CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhccCC
Q 000880 674 PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALP 732 (1239)
Q Consensus 674 Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~~~~ 732 (1239)
.............. .....+| ...++.++++|.+||+.||++||++ +++++||||
T Consensus 178 g~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 178 GKTLVECHPSGINT-HTTLNIP---EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CcchhhcCchhccc-ccccCCc---ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 33211100000000 0011122 2345789999999999999999986 999999997
No 403
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.9e-31 Score=329.77 Aligned_cols=261 Identities=22% Similarity=0.277 Sum_probs=176.0
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccC----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCc
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLD----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 497 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~ 497 (1239)
..++|++.+.||+|+||.||+|++..+ +..||||++..... .+....| .++...+.+++.++..+....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~- 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPV- 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhccc-
Confidence 468999999999999999999999988 89999998753221 1111111 223333444444433321110
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCC------------------
Q 000880 498 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH------------------ 558 (1239)
Q Consensus 498 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~------------------ 558 (1239)
.......+++||||++ ++|.+++.....
T Consensus 203 ---------------------------------~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~ 249 (566)
T PLN03225 203 ---------------------------------SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKG 249 (566)
T ss_pred ---------------------------------ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhcccc
Confidence 0123467899999997 589888864321
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCc
Q 000880 559 --FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 635 (1239)
Q Consensus 559 --l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1239)
.....+..++.||+.||+|||+++|+||||||+|||++. ++.+||+|||+|+.+.... .....
T Consensus 250 ~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------~~~~~ 315 (566)
T PLN03225 250 LERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------NYIPK 315 (566)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--------------ccCCc
Confidence 123456789999999999999999999999999999986 5799999999998542211 11124
Q ss_pred ccccCccCCCcccccCCC---------------------CCCcchhhHHHHHHHHHhhcCCchhHHH-HHHHHhhhhcCC
Q 000880 636 GQVGTYFYTAPEIEQGWP---------------------KIDEKADMYSLGIVFFELWHPFSTAMER-QIVLSDLKQKGE 693 (1239)
Q Consensus 636 ~~~GT~~Y~APE~l~~~~---------------------~~~~ksDIwSlGviL~ELltPf~~~~~~-~~~~~~~~~~~~ 693 (1239)
..+||+.|||||++.... .++.++|||||||+||||++|....... ......+.....
T Consensus 316 ~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~ 395 (566)
T PLN03225 316 EFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDY 395 (566)
T ss_pred ccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCC
Confidence 468999999999764311 2445679999999999999854332221 111111111110
Q ss_pred ------------CCCcc-------ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 694 ------------LPPSW-------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 694 ------------~p~~~-------~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
..+.. ........+||++||+.||.+|||+.++|+||||.+..
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 396 DLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG 457 (566)
T ss_pred cHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence 00000 00112345899999999999999999999999998764
No 404
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.4e-32 Score=297.57 Aligned_cols=250 Identities=26% Similarity=0.388 Sum_probs=192.3
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC--Cc----eeeeeeeeeec
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QH----VVRYYQAWFET 495 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H--pn----Iv~l~~~~~e~ 495 (1239)
..++|.++..+|+|.||.|..|.+..++..||||+++.- ....+...-|+.+|.++.+ |+ +|.+.++|
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF--- 160 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF--- 160 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh---
Confidence 367899999999999999999999999999999998732 2334556779999999932 32 44444433
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHH
Q 000880 496 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVE 573 (1239)
Q Consensus 496 ~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~~~~~~~i~~qI~~ 573 (1239)
....+.+||+|.++-|+.+++..+ .+++...++.+++|+++
T Consensus 161 -------------------------------------dyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~ 203 (415)
T KOG0671|consen 161 -------------------------------------DYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLE 203 (415)
T ss_pred -------------------------------------hccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHH
Confidence 235678999999999999999764 46999999999999999
Q ss_pred HHHHHHhCCccccCCCcccEEEcC--------------------CCCEEEeecCcchhccccccccCCCCCCCCCCcccc
Q 000880 574 GLAHIHGQGIIHRDLTPNNIFFDA--------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 633 (1239)
Q Consensus 574 gL~yLHs~gIiHrDLKp~NILl~~--------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1239)
+|+|||+++++|-||||+|||+.+ +..|||+|||.|++-.. .
T Consensus 204 sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e------------------~ 265 (415)
T KOG0671|consen 204 SVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE------------------H 265 (415)
T ss_pred HHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc------------------C
Confidence 999999999999999999999842 23589999999986321 1
Q ss_pred CcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhcCCc---hhHHHH--HHHHhhhhcCCCCCc-----------
Q 000880 634 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS---TAMERQ--IVLSDLKQKGELPPS----------- 697 (1239)
Q Consensus 634 ~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltPf~---~~~~~~--~~~~~~~~~~~~p~~----------- 697 (1239)
+++.+-|..|.|||++.+ -.++.++||||+||||+|+++++. ...+.+ ..++.+. +.+|..
T Consensus 266 hs~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl--Gp~P~~mi~r~~~~Kyf 342 (415)
T KOG0671|consen 266 HSTIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL--GPIPSRMIKKTRKEKYF 342 (415)
T ss_pred cceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh--CCCcHHHhhhhhhHhhh
Confidence 356789999999999999 469999999999999999997443 222222 1111111 111110
Q ss_pred ------cc-----------------------cCC---HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 698 ------WV-----------------------AKF---SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 698 ------~~-----------------------~~~---~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
|. ... -++.+||++||..||.+|+|+.|+|+||||...
T Consensus 343 ~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 343 RRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred hcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 00 000 135699999999999999999999999999865
No 405
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=314.94 Aligned_cols=246 Identities=30% Similarity=0.437 Sum_probs=185.6
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
-|..-+.||+|+||.||+++++.+|..||||.++... .....+...+|+++|++|+|||||++++.=...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~--------- 83 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETK--------- 83 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCcc---------
Confidence 3445578999999999999999999999999987433 445667888999999999999999998652110
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHG 580 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---~~l~~~~~~~i~~qI~~gL~yLHs 580 (1239)
.. | .-.....++||||. |||...+++. ..+++.+.+.++.+++.||.|||.
T Consensus 84 -~~-~-----------------------~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE 138 (732)
T KOG4250|consen 84 -FL-G-----------------------LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE 138 (732)
T ss_pred -cc-C-----------------------cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 01234579999995 6999999753 459999999999999999999999
Q ss_pred CCccccCCCcccEEEcC--CCC--EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 581 QGIIHRDLTPNNIFFDA--RND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 581 ~gIiHrDLKp~NILl~~--~~~--vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
+||+||||||.||++-. +|. -||+|||.|+-+..+. ..++.+||+.|++||.+.....|+
T Consensus 139 n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----------------~~~S~vGT~~YLhPel~E~q~~y~ 202 (732)
T KOG4250|consen 139 NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----------------LFTSLVGTEEYLHPELYERQKKYT 202 (732)
T ss_pred cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC----------------eeeeecCchhhcChHHHhhccCcC
Confidence 99999999999999843 343 7999999999765332 236789999999999998546799
Q ss_pred cchhhHHHHHHHHHhhc---CCchhH----HHHHHHHhhhhcCC-------------------CCCccccCCH----HHH
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGE-------------------LPPSWVAKFS----EQE 706 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~~~~~~~-------------------~p~~~~~~~~----e~~ 706 (1239)
..+|.|||||++|++.| ||-+.. ..+....++..+.. +|. ..+.++ .+.
T Consensus 203 ~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~ 281 (732)
T KOG4250|consen 203 ATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQ-PNHLSRGLATRLT 281 (732)
T ss_pred ceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCC-cccccHHHHhhhh
Confidence 99999999999999998 665432 22233333222111 111 111122 345
Q ss_pred HHHHHccCCCCCCCCC
Q 000880 707 SLLRRLMSPSPSDRPS 722 (1239)
Q Consensus 707 ~LI~~~L~~dP~~RPt 722 (1239)
.++..+|..+|.+|..
T Consensus 282 kwLa~~L~~~~~~~~~ 297 (732)
T KOG4250|consen 282 KWLASMLEWNPRKRGH 297 (732)
T ss_pred HHHHHHHhhhHHHhCC
Confidence 7788888999988884
No 406
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.3e-31 Score=294.96 Aligned_cols=249 Identities=25% Similarity=0.400 Sum_probs=188.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHh--cCCCceeeeeeeeeecCcccc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
+....+.++||+|.||.||+|... ++.||||+++.. ..+.+..|-.+.+. ++|+||++++++=- .
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~-----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ek-r----- 275 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ-----EKQSFQNEKNIYSLPGMKHENILQFIGAEK-R----- 275 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCHH-----HHHHHHhHHHHHhccCccchhHHHhhchhc-c-----
Confidence 456677899999999999999886 799999999743 34557777666655 48999999986521 0
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
| ......+++|++|.+ |+|.++|.. ..+++....+++.-+++||+|||
T Consensus 276 --------~----------------------t~~~~eywLVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LH 324 (534)
T KOG3653|consen 276 --------G----------------------TADRMEYWLVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLH 324 (534)
T ss_pred --------C----------------------CccccceeEEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhc
Confidence 0 012456899999997 899999976 45999999999999999999999
Q ss_pred h---------CCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 000880 580 G---------QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 650 (1239)
Q Consensus 580 s---------~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 650 (1239)
+ ..|+|||||++||||.+|+++.|+|||+|..+....- ..+..+.+||.+|||||+|.
T Consensus 325 ee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~-------------~~d~~~qVGT~RYMAPEvLE 391 (534)
T KOG3653|consen 325 EELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKP-------------QGDTHGQVGTRRYMAPEVLE 391 (534)
T ss_pred ccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCC-------------CcchhhhhhhhhhcCHHHHh
Confidence 7 2599999999999999999999999999998752210 11224479999999999998
Q ss_pred CCCCCC-----cchhhHHHHHHHHHhhc---------------CCch-------hHHHHHHHHhhhhcCCCCCccccCC-
Q 000880 651 GWPKID-----EKADMYSLGIVFFELWH---------------PFST-------AMERQIVLSDLKQKGELPPSWVAKF- 702 (1239)
Q Consensus 651 ~~~~~~-----~ksDIwSlGviL~ELlt---------------Pf~~-------~~~~~~~~~~~~~~~~~p~~~~~~~- 702 (1239)
|.-++. .+.||||+|.+||||++ ||.. ..+++.....-+..+.+|..|....
T Consensus 392 gainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~ 471 (534)
T KOG3653|consen 392 GAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAG 471 (534)
T ss_pred hhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCcc
Confidence 843333 46899999999999973 2321 1122222222233455677776542
Q ss_pred -HHHHHHHHHccCCCCCCCCCHHHHHh
Q 000880 703 -SEQESLLRRLMSPSPSDRPSATELLQ 728 (1239)
Q Consensus 703 -~e~~~LI~~~L~~dP~~RPta~eiL~ 728 (1239)
.-+++.+..||+.||+.|.|+.=+-+
T Consensus 472 ~~~l~et~EeCWDhDaeARLTA~Cv~e 498 (534)
T KOG3653|consen 472 MAVLCETIEECWDHDAEARLTAGCVEE 498 (534)
T ss_pred HHHHHHHHHHHcCCchhhhhhhHHHHH
Confidence 25689999999999999999865543
No 407
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=296.49 Aligned_cols=263 Identities=29% Similarity=0.459 Sum_probs=206.6
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-----chhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-----~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
++|-++..||+|||++||+|.+....+.||||+-.....- ........+|..+.+.|.||.||++|++|.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs----- 537 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS----- 537 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee-----
Confidence 5677889999999999999999988999999986543211 112345778999999999999999999872
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
.+...++-|+|||+| +|.-+|.....+++.+|+.|+.||+.||.|
T Consensus 538 ----------------------------------lDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~Y 583 (775)
T KOG1151|consen 538 ----------------------------------LDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKY 583 (775)
T ss_pred ----------------------------------eccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 134567899999986 898899999999999999999999999999
Q ss_pred HHhC--CccccCCCcccEEEcC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc-C
Q 000880 578 IHGQ--GIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ-G 651 (1239)
Q Consensus 578 LHs~--gIiHrDLKp~NILl~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~ 651 (1239)
|... .|||.||||.|||+-+ -|.+||+|||+++........... +.. -++-..||.||++||.+. +
T Consensus 584 LNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vd-------Gme-LTSQgAGTYWYLPPEcFvVg 655 (775)
T KOG1151|consen 584 LNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVD-------GME-LTSQGAGTYWYLPPECFVVG 655 (775)
T ss_pred HhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCccc-------cee-eecccCceeeecCcceeecC
Confidence 9976 5999999999999954 377999999999987544322110 000 123457999999999754 2
Q ss_pred --CCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHh---hh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 000880 652 --WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSD---LK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 722 (1239)
Q Consensus 652 --~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~---~~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 722 (1239)
.+..+.++||||+|||+|.++. ||......+..+.. +. ....+|+. +..++++++||++||+..-.+|..
T Consensus 656 kePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~D 734 (775)
T KOG1151|consen 656 KEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRID 734 (775)
T ss_pred CCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhh
Confidence 3568999999999999999996 89866554433321 11 12335543 456789999999999999999999
Q ss_pred HHHHHhccCCCC
Q 000880 723 ATELLQDALPPQ 734 (1239)
Q Consensus 723 a~eiL~~~~~~~ 734 (1239)
..++..||++..
T Consensus 735 V~qLA~dpyllP 746 (775)
T KOG1151|consen 735 VQQLACDPYLLP 746 (775)
T ss_pred HHHHccCccccc
Confidence 999999987643
No 408
>PRK09194 prolyl-tRNA synthetase; Provisional
Probab=99.97 E-value=2.3e-29 Score=310.70 Aligned_cols=433 Identities=13% Similarity=0.121 Sum_probs=265.2
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ecc--CCCccccccEEEEeccCCCeeeecCCCcHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLP 855 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~ 855 (1239)
+.+.|+++|+|.+++++++|++.+++.++++||++|.||.| ++. ++++...++||+|.|++|+.++|||+.+.+
T Consensus 34 ~~~~G~~~~lP~g~~~~~~i~~~i~~~~~~~G~~ei~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~l~LrPt~e~~ 113 (565)
T PRK09194 34 KLASGIYTYLPLGLRVLRKIENIVREEMNKIGAQEVLMPALQPAELWQESGRWEEYGPELLRLKDRHGRDFVLGPTHEEV 113 (565)
T ss_pred ccCCCeeEECccHHHHHHHHHHHHHHHHHHcCCEEEECcccCcHHHHhhcCCccccchhceEEecCCCCEEEECCCChHH
Confidence 46799999999999999999999999999999999999999 332 235667889999999999999999977665
Q ss_pred HHHHHHh----CCCCceeEEeecCeEEcC-CCCCC---CCceeEEeEEEeCCCCcccHH---HHHHHHHHHHHhcCCCCc
Q 000880 856 FIRWAIS----NQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 856 iaR~~~~----~~~~P~r~~Y~g~VfR~e-~~~~~---~~ef~Q~GvEiiG~~s~~aDa---Evi~la~~~l~~lgi~~~ 924 (1239)
++.++.. ++..|+|+||+|++||+| +|+.| .+||+|.|+++||.++..+|+ +++.++.+++++||++
T Consensus 114 ~~~~~~~~~~s~~~LP~r~yqi~~~fR~E~rp~~Gl~R~reF~q~d~~~f~~~~~~a~~~~~~~~~~~~~i~~~lgl~-- 191 (565)
T PRK09194 114 ITDLVRNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLDETYDAMYQAYSRIFDRLGLD-- 191 (565)
T ss_pred HHHHHHhhhhhcccCCeEEEEeeCCccCCCCCCCcccccccEEEeeEEEEcCChHHHHHHHHHHHHHHHHHHHHhCCc--
Confidence 5544443 345799999999999998 88865 457999999999999888998 6677779999999993
Q ss_pred eEEEECcHHHHHHHHH------------------HcCCCHHHHHHHHHHHHhhc---CCCCCcccccchHHHHHHHHH--
Q 000880 925 CDIHLNHGDLLEAIWS------------------WAGIKAEHREKVAELLAMMG---SLRPQSSEWKSKWVVIRRQLL-- 981 (1239)
Q Consensus 925 ~~i~lg~~~i~~~ll~------------------~lgl~~~~~~~l~~~l~~~d---~~~~~~~~~~~~~~~~~~~l~-- 981 (1239)
|.+.+++++.+.+... .++...+...+-...-...+ .+...........+++...+-
T Consensus 192 ~~~~~~~~g~~gg~~s~e~~~~~~~g~~~~~~c~~c~~~~n~e~a~~~~~~~~~~~~~~~~v~~p~~~t~~e~a~~lg~~ 271 (565)
T PRK09194 192 FRAVEADSGAIGGSASHEFMVLADSGEDTIVYSDESDYAANIEKAEALPPPRAAAEEALEKVDTPNAKTIEELAEFLNVP 271 (565)
T ss_pred cEEEEcccccCCCceeEEEEEecCCCceEEEEeCCCCcchhhhhhcccCCCCccccccceeecCCCCCcHHHHHHHhCCC
Confidence 9999888665543221 11111100000000000000 000000000000001000000
Q ss_pred -----HhcCCCHHHHHHHHHHHHHhcCChhhHHHHHhccCCC---ChhHHHHHHHH------HHHHccCc--ccEEEccC
Q 000880 982 -----QELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPA---DKPTRKALDEL------YLRIWRIE--KNIYIDAL 1045 (1239)
Q Consensus 982 -----~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~---~~~~~~~l~~l------~l~~~~~~--~~i~~Dl~ 1045 (1239)
+..=+..+. . + ++..+.|+..--+.++++.+.. .....+.+.++ .+.-+|.. -.+.+|.+
T Consensus 272 ~~~~~KtLi~~~~~-~-~--~lvvvp~d~~vn~~kl~~~lg~~~l~~a~~eel~~~~g~~~G~v~P~Gl~~~v~viiD~s 347 (565)
T PRK09194 272 AEKTVKTLLVKADG-E-L--VAVLVRGDHELNEVKLENLLGAAPLELATEEEIRAALGAVPGFLGPVGLPKDVPIIADRS 347 (565)
T ss_pred HHHeeEEEEEEeCC-e-E--EEEEeecchhhhHHHHHhhcCCcccccCCHHHHHHhhCCCCCccCcccCCCCceEEEecc
Confidence 000000000 0 0 0001122222222223322211 00111122221 11122221 24677887
Q ss_pred CCCCCCcccee-----EE-EE----------E----e--cCCCCccc---c-----cccc-cccccccccchhhhccccc
Q 000880 1046 MPPIESYHRNL-----FF-QV----------F----S--VKEKYPAT---L-----VEGT-LLAVGGRYDYLLHRMWDRE 1094 (1239)
Q Consensus 1046 ~~rgl~YYtG~-----vF-e~----------~----~--~~~~~~~~---~-----~~~~-~i~~GGRYD~L~~~fg~~~ 1094 (1239)
+...-.+|+|- -| .+ + . .+...|.- + -+.+ ..--|=+|-. .|+..
T Consensus 348 l~~~~~~~~gan~~g~h~~~~~~~~d~~~~~~~d~~~~~~g~~c~~c~~~l~~~~~iEvGh~f~lG~~ys~---~~~~~- 423 (565)
T PRK09194 348 VADMSNFVVGANEDDYHYVGVNWGRDFPVPEVADLRNVVEGDPSPDGGGTLKIARGIEVGHIFQLGTKYSE---AMNAT- 423 (565)
T ss_pred ccccccccccCCCCCceeeCCccCcCCCcccccchhhhhcCCCCCCCCceeEEeeeEEEEEEecCCcchhh---ccCCE-
Confidence 77666666541 11 00 0 0 00000000 0 0000 1112444442 23221
Q ss_pred cccccCCCCCCceeeeeccHHHHHhhCC-C-----CCcCCCCCCCceEEEEecC--CCccHHHHHHHHHHHHHcCCeEEE
Q 000880 1095 YVGYASRTNPPSGVGASLALETIIQHYP-V-----DFKPVRNEAGTSVLVCSRG--GGGLLVERMELVAELWEENIKAQF 1166 (1239)
Q Consensus 1095 ~~~~~g~~~~~pAvGfaigldrl~~~L~-~-----~~~~~~~~~~~~v~v~~~~--~~~~~~~a~~ia~~Lr~~G~~ve~ 1166 (1239)
+...-|+...+....|+||++||+.++. + +..++...+|.+|+|++.+ ++.....|.++++.||+.|++|++
T Consensus 424 ~~~~~g~~~~~~m~~~gIGv~Rli~al~e~~~d~~gl~~P~~iaP~~v~Iv~~~~~~~~~~~~a~~i~~~L~~~gi~v~~ 503 (565)
T PRK09194 424 VLDENGKAQPLIMGCYGIGVSRLVAAAIEQNHDEKGIIWPKAIAPFDVHIVPVNMKDEEVKELAEKLYAELQAAGIEVLL 503 (565)
T ss_pred EECCCCCEEeEEEeeEechHHHHHHHHHHhhccccCccCCCccCCceEEEEECCCCcHHHHHHHHHHHHHHhccCCeEEE
Confidence 0111222332333567999999988874 2 4344445688999999984 234678999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHH
Q 000880 1167 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1225 (1239)
Q Consensus 1167 ~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~ 1225 (1239)
++. +.++++++++|+..|+|++|+||++|+++|+|+||++.+|+|..|+++++++.+.
T Consensus 504 Ddr-~~~~g~k~~~ad~~GiP~~iiiG~~e~~~~~v~v~~r~~ge~~~v~~~~l~~~i~ 561 (565)
T PRK09194 504 DDR-KERPGVKFADADLIGIPHRIVVGDRGLAEGIVEYKDRRTGEKEEVPVDELVEFLK 561 (565)
T ss_pred ECC-CCCHHHHHHHHHhcCCCEEEEEcCccccCCeEEEEECCCCceEEEeHHHHHHHHH
Confidence 776 5799999999999999999999999999999999999999999999999998876
No 409
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=316.38 Aligned_cols=247 Identities=34% Similarity=0.484 Sum_probs=190.9
Q ss_pred EeeeccCCceE-EEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCCCCcC
Q 000880 429 LQPLGHGGFGH-VVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMW 506 (1239)
Q Consensus 429 ~~~LG~G~fG~-Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~~~~~ 506 (1239)
-+.+|.|+.|+ ||+|... |+.||||.+-. +...-..+|+..|+.- .|||||++|+. +
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~--E------------ 572 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE--GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCS--E------------ 572 (903)
T ss_pred HHHcccCCCCcEEEEEeeC--CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEee--c------------
Confidence 35689999987 7999886 89999997642 2234577999999888 79999999854 2
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CC---CCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 507 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DH---FDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 507 ~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~---l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
.+..++||..|+|..+|.+++... .. ......+.++.|++.||+|||+.+
T Consensus 573 --------------------------~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~ 626 (903)
T KOG1027|consen 573 --------------------------QDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK 626 (903)
T ss_pred --------------------------cCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc
Confidence 346789999999999999999874 11 111345788999999999999999
Q ss_pred ccccCCCcccEEEcC---C--CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 000880 583 IIHRDLTPNNIFFDA---R--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 657 (1239)
Q Consensus 583 IiHrDLKp~NILl~~---~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 657 (1239)
||||||||.||||+. + ..++|+|||+++.+..... .++. ..+..||-+|+|||++.. ..-+.
T Consensus 627 iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s-----------S~~r-~s~~sGt~GW~APE~L~~-~~~~~ 693 (903)
T KOG1027|consen 627 IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS-----------SFSR-LSGGSGTSGWQAPEQLRE-DRKTQ 693 (903)
T ss_pred cccccCCCceEEEEccCCCcceeEEecccccccccCCCcc-----------hhhc-ccCCCCcccccCHHHHhc-cccCc
Confidence 999999999999976 3 3589999999998743321 1111 355679999999999998 45677
Q ss_pred chhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 658 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 658 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
++||||+||++|..++ ||.....++.-+ +........--+..-.++.+||.+|++++|..||+|.++|.||||-
T Consensus 694 avDiFslGCvfyYvltgG~HpFGd~~~R~~NI--l~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 694 AVDIFSLGCVFYYVLTGGSHPFGDSLERQANI--LTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred ccchhhcCceEEEEecCCccCCCchHHhhhhh--hcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 9999999999999985 999887765432 2222221110000011899999999999999999999999999988
Q ss_pred CchH
Q 000880 734 QMEY 737 (1239)
Q Consensus 734 ~~~~ 737 (1239)
..+.
T Consensus 772 ~~ek 775 (903)
T KOG1027|consen 772 DSEK 775 (903)
T ss_pred ChHH
Confidence 7654
No 410
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.2e-32 Score=285.04 Aligned_cols=258 Identities=27% Similarity=0.392 Sum_probs=202.0
Q ss_pred EeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 429 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
-+.||-|+||.||.+.+..+|+.||+|++..-........++.+|+++|..++|.|++..++...-+ ..+
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPp-h~d--------- 127 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPA-NPS--------- 127 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCC-Cch---------
Confidence 4779999999999999999999999999876555555678899999999999999999988664221 110
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 588 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDL 588 (1239)
--..+|+++|++..+|..++.+...++...++-+++||++||+|||+.+|.||||
T Consensus 128 -------------------------fFqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDI 182 (449)
T KOG0664|consen 128 -------------------------FFQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDI 182 (449)
T ss_pred -------------------------HHHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccC
Confidence 0124689999999999999998899999999999999999999999999999999
Q ss_pred CcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHH
Q 000880 589 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 668 (1239)
Q Consensus 589 Kp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL 668 (1239)
||.|.|++++..+||||||+|+.....+ +..++..+-|..|.|||++.|...|+.+.||||+|||+
T Consensus 183 KPGNLLVNSNCvLKICDFGLARvee~d~--------------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIF 248 (449)
T KOG0664|consen 183 KPGNLLVNSNCILKICDFGLARTWDQRD--------------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIF 248 (449)
T ss_pred CCccEEeccCceEEecccccccccchhh--------------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHH
Confidence 9999999999999999999999753322 12245567889999999999988899999999999999
Q ss_pred HHhhc---CCchhHHHH---------------H-------HHHhhhhcCCCCCccc---------cCCHHHHHHHHHccC
Q 000880 669 FELWH---PFSTAMERQ---------------I-------VLSDLKQKGELPPSWV---------AKFSEQESLLRRLMS 714 (1239)
Q Consensus 669 ~ELlt---Pf~~~~~~~---------------~-------~~~~~~~~~~~p~~~~---------~~~~e~~~LI~~~L~ 714 (1239)
.||+. -|....+.+ . ....+...+..+|+.. ....+...++..++.
T Consensus 249 aELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~ 328 (449)
T KOG0664|consen 249 AELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLH 328 (449)
T ss_pred HHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhC
Confidence 99973 121111110 0 0111111222233222 122366789999999
Q ss_pred CCCCCCCCHHHHHhccCCCCc
Q 000880 715 PSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 715 ~dP~~RPta~eiL~~~~~~~~ 735 (1239)
.||++|.+.++.+.|++....
T Consensus 329 ~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 329 FDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred CCCcccccHhhhccccccccc
Confidence 999999999999999876544
No 411
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=1e-31 Score=311.83 Aligned_cols=271 Identities=26% Similarity=0.451 Sum_probs=219.7
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
.++|+.+.++|.|.||.||+++++.+++..|+|+++..... ...-+..|+-+++..+|||||.|++.+..
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsylr-------- 83 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYLR-------- 83 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhhh--------
Confidence 37899999999999999999999999999999999875432 34557789999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
...+||.||||+ |+|++..+-.+.+++-++...++..+.|++|||++
T Consensus 84 --------------------------------~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~ 131 (829)
T KOG0576|consen 84 --------------------------------RDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ 131 (829)
T ss_pred --------------------------------hcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC
Confidence 456899999997 59999998889999999999999999999999999
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc--cCCCCCCcch
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE--QGWPKIDEKA 659 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l--~~~~~~~~ks 659 (1239)
|=+|||||-.|||+++.|.+|++|||.+..+.. +-....++.|||.|||||+- .....|...+
T Consensus 132 gk~hRdiKGanilltd~gDvklaDfgvsaqita---------------ti~KrksfiGtpywmapEvaaverkggynqlc 196 (829)
T KOG0576|consen 132 GKIHRDIKGANILLTDEGDVKLADFGVSAQITA---------------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLC 196 (829)
T ss_pred CcccccccccceeecccCceeecccCchhhhhh---------------hhhhhhcccCCccccchhHHHHHhcccccccc
Confidence 999999999999999999999999999986531 12234678999999999973 3345699999
Q ss_pred hhHHHHHHHHHhh--c-CCchhHHHHHHHHhhhhcCCCCCc---cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 660 DMYSLGIVFFELW--H-PFSTAMERQIVLSDLKQKGELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 660 DIwSlGviL~ELl--t-Pf~~~~~~~~~~~~~~~~~~~p~~---~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
|+|++|++..|+- + |..+.+++....-.-. .+.-|+. ....++.+.+|++.+|.++|++|||++.+|+|+|..
T Consensus 197 diwa~gitAiel~eLqpplfdlhpmr~l~LmTk-S~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs 275 (829)
T KOG0576|consen 197 DIWALGITAIELGELQPPLFDLHPMRALFLMTK-SGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVS 275 (829)
T ss_pred cccccccchhhhhhcCCcccccchHHHHHHhhc-cCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeec
Confidence 9999999999985 3 6666666655443322 3333332 233456788999999999999999999999999876
Q ss_pred Cch-HHHHHHHHHhcCCCC
Q 000880 734 QME-YELLDNILRMMHSSE 751 (1239)
Q Consensus 734 ~~~-~~~~~~~~~~~~~~~ 751 (1239)
+-. ....-.++....+++
T Consensus 276 ~~l~~rl~~eLLdK~n~P~ 294 (829)
T KOG0576|consen 276 QTLSRRLAIELLDKVNNPN 294 (829)
T ss_pred cchhhHHHHHHHHHccCCC
Confidence 652 333344555555554
No 412
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=6.8e-31 Score=270.53 Aligned_cols=253 Identities=21% Similarity=0.387 Sum_probs=199.6
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCcccc
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~ 500 (1239)
..++|++++++|+|-|++||-|.+..+++.++||+++.. ....+.+|+.+|..|. ||||+++++...++
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp----- 105 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDP----- 105 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCc-----
Confidence 468999999999999999999999999999999998632 3457999999999996 99999999876443
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
......+++||+.. +...+. ..++.-.++.++.+++.||.|||
T Consensus 106 ---------------------------------~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCH 149 (338)
T KOG0668|consen 106 ---------------------------------ESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCH 149 (338)
T ss_pred ---------------------------------cccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHH
Confidence 23445789999975 555543 45778889999999999999999
Q ss_pred hCCccccCCCcccEEEcCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 000880 580 GQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 658 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 658 (1239)
|+||+|||+||.|+|||.. ..++|+|+|+|.++.... .-+.++.+..|--||.+-..+.|+..
T Consensus 150 S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~----------------eYnVRVASRyfKGPELLVdy~~YDYS 213 (338)
T KOG0668|consen 150 SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK----------------EYNVRVASRYFKGPELLVDYQMYDYS 213 (338)
T ss_pred hcCcccccCCcceeeechhhceeeeeecchHhhcCCCc----------------eeeeeeehhhcCCchheeechhcccc
Confidence 9999999999999999975 569999999999875332 12445778889999999988889999
Q ss_pred hhhHHHHHHHHHhhc---CCchhH-HHHHHHHhhh-------------hcCCCCCc------------c--------cc-
Q 000880 659 ADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLK-------------QKGELPPS------------W--------VA- 700 (1239)
Q Consensus 659 sDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~~~-------------~~~~~p~~------------~--------~~- 700 (1239)
-|||||||+|..|+- ||.... +.....++.. -...++|. | ..
T Consensus 214 LD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl 293 (338)
T KOG0668|consen 214 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL 293 (338)
T ss_pred HHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc
Confidence 999999999999984 775332 2222111110 00011111 1 11
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 000880 701 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 736 (1239)
Q Consensus 701 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 736 (1239)
.+|++.+|+.++|..|..+|+||.+++.||||....
T Consensus 294 ~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 294 VSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred CChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 247899999999999999999999999999987653
No 413
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-31 Score=284.17 Aligned_cols=256 Identities=27% Similarity=0.391 Sum_probs=199.2
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+|.-++.+|.|.- .|..+-+...++.||+|+...........++..+|..++..++|+||++++.+|.-
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP--------- 86 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTP--------- 86 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCc---------
Confidence 45666788999987 78888898899999999987665555566789999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
+........+|+|||||..+|.+.+. -.++.....+++.|++.|++|||+.||
T Consensus 87 -------------------------~~~l~~~~e~y~v~e~m~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~I 139 (369)
T KOG0665|consen 87 -------------------------QKTLEEFQEVYLVMELMDANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGI 139 (369)
T ss_pred -------------------------cccHHHHHhHHHHHHhhhhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcce
Confidence 12223446789999999999999887 447888999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+||||||+||++..++.+||.|||+|+... ..+..+.++.|..|.|||++.+.+ |...+||||
T Consensus 140 ihRdLkPsnivv~~~~~lKi~dfg~ar~e~----------------~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwS 202 (369)
T KOG0665|consen 140 IHRDLKPSNIVVNSDCTLKILDFGLARTED----------------TDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWS 202 (369)
T ss_pred eecccCcccceecchhheeeccchhhcccC----------------cccccCchhheeeccCchheeccC-Ccccchhhh
Confidence 999999999999999999999999998531 224567789999999999999955 999999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHH--------------HH-------h----------hhhcCCCCC-ccc-------cC
Q 000880 664 LGIVFFELWH---PFSTAMERQIV--------------LS-------D----------LKQKGELPP-SWV-------AK 701 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~--------------~~-------~----------~~~~~~~p~-~~~-------~~ 701 (1239)
+||++.||++ -|.+....... +. + ......+|. .|. ..
T Consensus 203 vGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~ 282 (369)
T KOG0665|consen 203 VGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLD 282 (369)
T ss_pred hhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccc
Confidence 9999999974 12111110000 00 0 000011111 010 11
Q ss_pred CHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 000880 702 FSEQESLLRRLMSPSPSDRPSATELLQDALPP 733 (1239)
Q Consensus 702 ~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 733 (1239)
...+++++.+||..||++|.++.++|+||+++
T Consensus 283 ~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 283 CSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 23568999999999999999999999999887
No 414
>PLN02908 threonyl-tRNA synthetase
Probab=99.97 E-value=2.2e-29 Score=316.33 Aligned_cols=352 Identities=14% Similarity=0.133 Sum_probs=259.0
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ec--cCCCccccccEEEEeccCCCeeeecCCCcHHH
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 856 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~i 856 (1239)
.+.|+++|+|..+.+++.+.+.+++.+.++||++|.||.| ++ .++.+...++||.| |.+++.++|||+.|+++
T Consensus 309 ~~~G~~~~lP~g~~i~~~l~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sGh~~~~~~~mf~~-~~~~~~~~Lrp~~~~~~ 387 (686)
T PLN02908 309 LSPGSCFFLPHGARIYNKLMDFIREQYWERGYDEVITPNIYNMDLWETSGHAAHYKENMFVF-EIEKQEFGLKPMNCPGH 387 (686)
T ss_pred CCCcceEEechHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhccEE-ecCCeeEEEcCCCcHHH
Confidence 3579999999999999999999999999999999999999 22 33456688999998 66789999999999999
Q ss_pred HHHHHhCC----CCceeEEeecCeEEcCCCC-----CCCCceeEEeEEEeCCC-CcccHH-HHHHHHHHHHHhcCCCCce
Q 000880 857 IRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGA-SALTEA-EVLKVTMDIVTRFFHAESC 925 (1239)
Q Consensus 857 aR~~~~~~----~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~-s~~aDa-Evi~la~~~l~~lgi~~~~ 925 (1239)
+++++... ..|+|+|++|+|||+|.+. .|.+||+|+++++||.. ...+|+ |++.++.++++.||+. +
T Consensus 388 ~~~~~~~~~s~r~LPlr~~~~g~~fR~E~~~~l~Gl~RvReF~q~d~~if~~~~q~~~e~~~~l~~~~~v~~~lG~~--~ 465 (686)
T PLN02908 388 CLMFAHRVRSYRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKGVLDFLDYVYEVFGFT--Y 465 (686)
T ss_pred HHHHhccccChhhCCHhHEEeeccccCCCCcCCcCccccccEEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHCCCc--E
Confidence 99888732 4599999999999998873 25567999999999995 457888 9999999999999993 9
Q ss_pred EEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCh
Q 000880 926 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAA 1005 (1239)
Q Consensus 926 ~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~ 1005 (1239)
.+.|+++. +.++..++.-+.....+..++++.++. +. + ...+ . .+.|+.
T Consensus 466 ~~~ls~r~--~~~~g~~~~w~~ae~~l~~~ld~~~~~------~~---------~---~~g~-------~----afygpk 514 (686)
T PLN02908 466 ELKLSTRP--EKYLGDLETWDKAEAALTEALNAFGKP------WQ---------L---NEGD-------G----AFYGPK 514 (686)
T ss_pred EEEEeCCc--cccCCCHHHHHHHHHHHHHHHHHcCCC------cE---------E---CCCc-------e----eecccc
Confidence 99999975 555443333333344466666665421 00 0 0000 0 111221
Q ss_pred hhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCC--CCCccceeEEEEEecCCCCcccccccccccccccc
Q 000880 1006 DQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP--IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1083 (1239)
Q Consensus 1006 ~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~r--gl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRY 1083 (1239)
. +..+..++.++ .. ...+.+|+.+.. +++||| |... .
T Consensus 515 i------------d~~~~d~l~r~----~~-~~t~q~df~lp~~f~L~Y~~----e~~~---~----------------- 553 (686)
T PLN02908 515 I------------DITVSDALKRK----FQ-CATVQLDFQLPIRFKLSYSA----EDEA---K----------------- 553 (686)
T ss_pred e------------EEEEEeccCCE----ee-ccceeecccCHhhcCCEEEC----CCCC---c-----------------
Confidence 0 00111222222 00 013445555433 577777 1100 0
Q ss_pred cchhhhccccccccccCCCCCCceeeeec--cHHHHHhhCC-C--CCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHH
Q 000880 1084 DYLLHRMWDREYVGYASRTNPPSGVGASL--ALETIIQHYP-V--DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1158 (1239)
Q Consensus 1084 D~L~~~fg~~~~~~~~g~~~~~pAvGfai--gldrl~~~L~-~--~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr 1158 (1239)
..+ ...+.-|+ ++||++.+|. . +..+.|. .+.+|+|++.+ +....+|+++++.||
T Consensus 554 -----------------~~~-pv~ihrai~GsiERli~iL~e~~~g~~p~wl-sp~qv~Vipv~-~~~~~~A~~va~~LR 613 (686)
T PLN02908 554 -----------------IER-PVMIHRAILGSVERMFAILLEHYAGKWPFWL-SPRQAIVVPIS-EKSQDYAEEVRAQLH 613 (686)
T ss_pred -----------------CCC-CEEEEeCceEhHHHHHHHHHHHcCCCCCCCC-CCceEEEEEEC-HHHHHHHHHHHHHHH
Confidence 000 01221222 7999998884 2 4444443 47799999996 677899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHh
Q 000880 1159 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1230 (1239)
Q Consensus 1159 ~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~ 1230 (1239)
++|++|+++.. ++++++++++|++.|+++++|+|++|.++|+|+||++.+++|.+++++++++.+++..+.
T Consensus 614 ~~Gi~vevd~~-~~~l~kkir~A~~~g~~~viivG~~E~~~~~V~vr~~~~~~q~~i~l~el~~~l~~~~~~ 684 (686)
T PLN02908 614 AAGFYVDVDVT-DRKIQKKVREAQLAQYNYILVVGEAEAATGTVNVRTRDNVVHGEKKIEELLTEFKEERAE 684 (686)
T ss_pred HCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECchHHhCCEEEEEECCCCceeeeeHHHHHHHHHHHHhh
Confidence 99999998776 679999999999999999999999999999999999999999999999999999877654
No 415
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3.4e-29 Score=275.19 Aligned_cols=239 Identities=33% Similarity=0.564 Sum_probs=193.5
Q ss_pred CceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCcccccc
Q 000880 436 GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASST 515 (1239)
Q Consensus 436 ~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~~~s~~ 515 (1239)
+||.||+|.+..+|+.+|+|++........ ...+.+|+..++.++|+||+++++.+..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------------------- 58 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFED--------------------- 58 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheee---------------------
Confidence 689999999998899999999875443221 5789999999999999999999987632
Q ss_pred cccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEE
Q 000880 516 FSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 594 (1239)
Q Consensus 516 ~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NIL 594 (1239)
....+++|||+++ +|..++.....++...++.++.+++.++.|||+.+++|+||+|.||+
T Consensus 59 -------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~ 119 (244)
T smart00220 59 -------------------EDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENIL 119 (244)
T ss_pred -------------------CCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeE
Confidence 2567999999986 99999987666999999999999999999999999999999999999
Q ss_pred EcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc-
Q 000880 595 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 673 (1239)
Q Consensus 595 l~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt- 673 (1239)
++.++.++|+|||++....... ......++..|+|||.+.+ ..++.++|+||||+++|+|++
T Consensus 120 ~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~~pE~~~~-~~~~~~~Di~slG~~l~~l~~~ 182 (244)
T smart00220 120 LDEDGHVKLADFGLARQLDPGG----------------LLTTFVGTPEYMAPEVLLG-KGYGKAVDVWSLGVILYELLTG 182 (244)
T ss_pred ECCCCcEEEccccceeeecccc----------------ccccccCCcCCCCHHHHcc-CCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999998753221 1234568899999999886 567889999999999999996
Q ss_pred --CCchhHHHHHHHHhhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 674 --PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 674 --Pf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
||.................. ........+.++.+++.+||..+|++||++.++++|+|+
T Consensus 183 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 183 KPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred CCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 77553333333333321111 111211156689999999999999999999999999986
No 416
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=5.1e-29 Score=300.89 Aligned_cols=268 Identities=18% Similarity=0.238 Sum_probs=182.0
Q ss_pred cccCCceEEeeeccCCceEEEEEEEc----------------cCCcEEEEEEEecCCCCch------------hHHHHHH
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNK----------------LDGRHYAVKKIRLKDKSLP------------VNDRILR 472 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~----------------~~g~~vAVK~i~~~~~~~~------------~~~~~~~ 472 (1239)
...++|++.++||+|+||.||+|.+. ..++.||||.+........ ..+....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 34689999999999999999999752 2456899999865322100 1122344
Q ss_pred HHHHHHhcCCCce-----eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-
Q 000880 473 EVATLSRLQHQHV-----VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 546 (1239)
Q Consensus 473 Ev~iL~~L~HpnI-----v~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~- 546 (1239)
|+..+.+++|.++ ++++++|.... .+........|+||||++
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~--------------------------------~~g~~~~~~~~LV~Ey~~~ 269 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNT--------------------------------ADGAFTKGSQWLVWKFESD 269 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhccccc--------------------------------ccccccCCceEEEEEcCCC
Confidence 6777777766654 44555442210 001112345799999996
Q ss_pred CCHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEE
Q 000880 547 RTLRQVFESY------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 602 (1239)
Q Consensus 547 gsL~~~l~~~------------------------~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vK 602 (1239)
++|.++++.. ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 270 gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~k 349 (507)
T PLN03224 270 ATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVK 349 (507)
T ss_pred CcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEE
Confidence 5898888632 1245678889999999999999999999999999999999999999
Q ss_pred EeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC-------------------C--Ccchhh
Q 000880 603 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-------------------I--DEKADM 661 (1239)
Q Consensus 603 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-------------------~--~~ksDI 661 (1239)
|+|||+++...... ........+|+.|+|||++..... | ..+.||
T Consensus 350 L~DFGla~~~~~~~--------------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~Dv 415 (507)
T PLN03224 350 IIDFGAAVDMCTGI--------------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDS 415 (507)
T ss_pred EEeCcCccccccCC--------------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccch
Confidence 99999997542110 001122345899999998764211 1 134799
Q ss_pred HHHHHHHHHhhc----CCchhHH--HHH-----HHH---hhhhcCCCCCccccCCHHHHHHHHHccCCCC---CCCCCHH
Q 000880 662 YSLGIVFFELWH----PFSTAME--RQI-----VLS---DLKQKGELPPSWVAKFSEQESLLRRLMSPSP---SDRPSAT 724 (1239)
Q Consensus 662 wSlGviL~ELlt----Pf~~~~~--~~~-----~~~---~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP---~~RPta~ 724 (1239)
||+||++|+|++ ||..... .+. ... .........+.+...++...+|+.+||..+| .+|+|+.
T Consensus 416 wSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~ 495 (507)
T PLN03224 416 YTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVG 495 (507)
T ss_pred hhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHH
Confidence 999999999986 4432111 000 000 0110111122345567789999999999876 6899999
Q ss_pred HHHhccCCCC
Q 000880 725 ELLQDALPPQ 734 (1239)
Q Consensus 725 eiL~~~~~~~ 734 (1239)
++|+||||.+
T Consensus 496 eaL~Hp~f~~ 505 (507)
T PLN03224 496 QALSHRFFLP 505 (507)
T ss_pred HHhCCCCcCC
Confidence 9999999964
No 417
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=6.4e-29 Score=310.05 Aligned_cols=248 Identities=24% Similarity=0.330 Sum_probs=199.0
Q ss_pred CceEEeeeccCCceEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 496 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~ 496 (1239)
++.+.+.||.|.||.|++|..+. ....||||.++..... .....+..|+++|+.+ .||||+.++|+|..
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~-- 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ-- 373 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc--
Confidence 34556699999999999997541 1457999998754444 6678899999999999 69999999999833
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC----------------CC
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HF 559 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l 559 (1239)
...+++|+|||. |+|..+++... .+
T Consensus 374 --------------------------------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L 415 (609)
T KOG0200|consen 374 --------------------------------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDAL 415 (609)
T ss_pred --------------------------------------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCc
Confidence 356799999996 79999987654 38
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 000880 560 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 639 (1239)
Q Consensus 560 ~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 639 (1239)
+....+.++.||+.||+||++..+|||||-.+|||+..+..+||+|||+|+........ ..++..|
T Consensus 416 ~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y--------------~~~~~~~ 481 (609)
T KOG0200|consen 416 TTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYY--------------RTKSSAG 481 (609)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCce--------------EecCCCC
Confidence 88899999999999999999999999999999999999999999999999854322211 0011122
Q ss_pred --CccCCCcccccCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHcc
Q 000880 640 --TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 713 (1239)
Q Consensus 640 --T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L 713 (1239)
...|||||.+.. ..|+.++|||||||+|||+++ |+............+ ..+.....+..+++++.++|+.||
T Consensus 482 ~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l-~~G~r~~~P~~c~~eiY~iM~~CW 559 (609)
T KOG0200|consen 482 TLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFL-KEGNRMEQPEHCSDEIYDLMKSCW 559 (609)
T ss_pred ccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHH-hcCCCCCCCCCCCHHHHHHHHHHh
Confidence 345999999998 789999999999999999996 877644233334433 356666666677889999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 000880 714 SPSPSDRPSATELLQD 729 (1239)
Q Consensus 714 ~~dP~~RPta~eiL~~ 729 (1239)
+.+|++||++.++...
T Consensus 560 ~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 560 NADPEDRPTFSECVEF 575 (609)
T ss_pred CCCcccCCCHHHHHHH
Confidence 9999999999999863
No 418
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-29 Score=296.20 Aligned_cols=246 Identities=24% Similarity=0.333 Sum_probs=200.2
Q ss_pred ceEEeeeccCCceEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 501 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~ 501 (1239)
++..++||.|+||+||+|.|...|+ +||||++. ...+......+++|+.+|.++.|||++++++.|...
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~-~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------ 770 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLI-EFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------ 770 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEee-ccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------
Confidence 4446899999999999999976665 68999886 344555678899999999999999999999998432
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 000880 502 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 502 ~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
.+-||++|++ |.|.++++.. +.+-....+.|..||++||.|||
T Consensus 771 -----------------------------------~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe 815 (1177)
T KOG1025|consen 771 -----------------------------------TLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE 815 (1177)
T ss_pred -----------------------------------hHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 2568999998 7999998754 56888889999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
.++++||||-.+|||+....++||.|||+|+.+....... ......-.+-|||-|.+.. ..|+.++
T Consensus 816 ~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey-------------~~~~gK~pikwmale~i~~-~~~thqS 881 (1177)
T KOG1025|consen 816 EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY-------------SAPGGKVPIKWMALESIRI-RKYTHQS 881 (1177)
T ss_pred hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc-------------cccccccCcHHHHHHHhhc-cCCCchh
Confidence 9999999999999999999999999999999875433211 1122334567999998887 6799999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 660 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 660 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
|||||||++||++| |+......++. .+...+...+.++.++-++..++.+||..|+..||+|+++...
T Consensus 882 DVWsfGVtiWElmTFGa~Py~gi~~~eI~--dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 882 DVWSFGVTIWELMTFGAKPYDGIPAEEIP--DLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred hhhhhhhhHHHHHhcCCCccCCCCHHHhh--HHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 99999999999997 77666555543 2333555555556667789999999999999999999998753
No 419
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.4e-28 Score=273.60 Aligned_cols=135 Identities=23% Similarity=0.380 Sum_probs=117.0
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-----CC---ceeeeeeeeeec
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----HQ---HVVRYYQAWFET 495 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-----Hp---nIv~l~~~~~e~ 495 (1239)
.+|.++++||.|.|++||+|.+..+.+.||+|+.+. .....+..+.|+++|++++ |+ +||++++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 689999999999999999999999999999999873 2234567889999999982 43 699999988654
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHH
Q 000880 496 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVE 573 (1239)
Q Consensus 496 ~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~~~~~~~i~~qI~~ 573 (1239)
| .+..+++||+|+++.+|..+|.. +..++...++.|++||+.
T Consensus 155 G------------------------------------pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~ 198 (590)
T KOG1290|consen 155 G------------------------------------PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLT 198 (590)
T ss_pred C------------------------------------CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence 4 24678999999999999999975 456999999999999999
Q ss_pred HHHHHHh-CCccccCCCcccEEEcC
Q 000880 574 GLAHIHG-QGIIHRDLTPNNIFFDA 597 (1239)
Q Consensus 574 gL~yLHs-~gIiHrDLKp~NILl~~ 597 (1239)
||.|||. .||||-||||+|||+..
T Consensus 199 GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 199 GLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHhcCccccCCCcceeeeec
Confidence 9999997 59999999999999953
No 420
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=2.7e-29 Score=283.62 Aligned_cols=251 Identities=25% Similarity=0.417 Sum_probs=197.1
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC------CceeeeeeeeeecC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH------QHVVRYYQAWFETG 496 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H------pnIv~l~~~~~e~~ 496 (1239)
-+.|.+....|+|-|++|.+|++..-|+.||||+|+..+. ....=++|+.+|++|+. -|+++++..|.
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~--- 504 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK--- 504 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh---
Confidence 4679999999999999999999999999999999984432 34456789999999952 37788776653
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCC---CCHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH---FDKELAWHLFRQIVE 573 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~---l~~~~~~~i~~qI~~ 573 (1239)
...++|||+|-+..+|.++|.+++. +....++.|+.|+..
T Consensus 505 -------------------------------------hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLfl 547 (752)
T KOG0670|consen 505 -------------------------------------HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFL 547 (752)
T ss_pred -------------------------------------hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHH
Confidence 3578999999999999999998764 888999999999999
Q ss_pred HHHHHHhCCccccCCCcccEEEcCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 000880 574 GLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 652 (1239)
Q Consensus 574 gL~yLHs~gIiHrDLKp~NILl~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 652 (1239)
||..|-..||+|.||||.|||+++. ..+||||||.|.+...+++ +.+.-+..|.|||++.|
T Consensus 548 ALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei-----------------tPYLVSRFYRaPEIiLG- 609 (752)
T KOG0670|consen 548 ALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI-----------------TPYLVSRFYRAPEIILG- 609 (752)
T ss_pred HHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccc-----------------cHHHHHHhccCcceeec-
Confidence 9999999999999999999999876 5689999999987654432 23445667999999999
Q ss_pred CCCCcchhhHHHHHHHHHhhc---CCchhHHHHHH--HHh----------------------------------------
Q 000880 653 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIV--LSD---------------------------------------- 687 (1239)
Q Consensus 653 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~--~~~---------------------------------------- 687 (1239)
-.|+...|+||+||+||||+| -|.+..+.+.+ ...
T Consensus 610 ~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~ 689 (752)
T KOG0670|consen 610 LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKR 689 (752)
T ss_pred CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeE
Confidence 569999999999999999987 23333222211 110
Q ss_pred ---------------hhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 688 ---------------LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 688 ---------------~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
+.....+|........++.+|+..||..||++|.|..++|+|||+..
T Consensus 690 ~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 690 TVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred EEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 00111112222222235679999999999999999999999999864
No 421
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=9.6e-29 Score=251.76 Aligned_cols=200 Identities=27% Similarity=0.441 Sum_probs=165.1
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+++..+..||+|++|.|-+.+|..+|...|+|.++..-.+ ....+.++|+.+..+. ..|++|.+||+++.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~-q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-------- 116 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS-QEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-------- 116 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcCh-HHHHHHHHhhhhhccCCCCCeEEEeehhhhc--------
Confidence 5566678899999999999999999999999999865443 4456788898887666 79999999998754
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHH----HHhcCCCCHHHHHHHHHHHHHHHHHH
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV----FESYDHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~----l~~~~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
...+||.||.|..||..+ +.....+++...-+++..++.||.||
T Consensus 117 --------------------------------egdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L 164 (282)
T KOG0984|consen 117 --------------------------------EGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFL 164 (282)
T ss_pred --------------------------------cccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHH
Confidence 345799999999887665 45667899999999999999999999
Q ss_pred HhC-CccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CC
Q 000880 579 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PK 654 (1239)
Q Consensus 579 Hs~-gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~ 654 (1239)
|++ .+||||+||+||||+.+|++|+||||++-.+...- ..+-..|...|||||.+... ..
T Consensus 165 ~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi----------------Akt~daGCkpYmaPEri~~e~n~~g 228 (282)
T KOG0984|consen 165 HSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI----------------AKTMDAGCKPYMAPERINPELNQKG 228 (282)
T ss_pred HHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh----------------HHHHhcCCCccCChhhcCcccCccc
Confidence 986 79999999999999999999999999998764321 12234688889999987642 35
Q ss_pred CCcchhhHHHHHHHHHhhc---CCchhHH
Q 000880 655 IDEKADMYSLGIVFFELWH---PFSTAME 680 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELlt---Pf~~~~~ 680 (1239)
|+-++||||||++++||.+ |+..+..
T Consensus 229 Y~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 229 YSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred ceeehhhhhhhhhhhhhhhccccccccCC
Confidence 8999999999999999985 6655533
No 422
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=2.1e-28 Score=324.87 Aligned_cols=236 Identities=21% Similarity=0.331 Sum_probs=178.3
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
..|.....||+|+||.||+|+++.+|..||||.++..... ...|+..+++++|||||+++++|.+
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~--------- 754 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRS--------- 754 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEc---------
Confidence 4566678899999999999999989999999988633221 2346889999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH--- 579 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH--- 579 (1239)
....|+|||||+ |+|.++++. +++..+..++.||+.||+|||
T Consensus 755 -------------------------------~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~ 800 (968)
T PLN00113 755 -------------------------------EKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRC 800 (968)
T ss_pred -------------------------------CCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCC
Confidence 234689999996 699999863 889999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcch
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 659 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 659 (1239)
+.+|+||||||+||+++.++..++. ||.+.... ......||+.|||||++.+ ..++.++
T Consensus 801 ~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~t~~y~aPE~~~~-~~~~~~s 859 (968)
T PLN00113 801 SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC-------------------TDTKCFISSAYVAPETRET-KDITEKS 859 (968)
T ss_pred CCCeecCCCCHHhEEECCCCceEEE-eccccccc-------------------cCCCccccccccCcccccC-CCCCccc
Confidence 6799999999999999999888876 66544321 0123368999999999987 5699999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHH----HHHHHhhhh--------cCCCCCc---cccCCHHHHHHHHHccCCCCCCCC
Q 000880 660 DMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQ--------KGELPPS---WVAKFSEQESLLRRLMSPSPSDRP 721 (1239)
Q Consensus 660 DIwSlGviL~ELlt---Pf~~~~~~----~~~~~~~~~--------~~~~p~~---~~~~~~e~~~LI~~~L~~dP~~RP 721 (1239)
|||||||++|||++ ||...... ......... .+..... ......++.+++.+||+.||.+||
T Consensus 860 Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP 939 (968)
T PLN00113 860 DIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP 939 (968)
T ss_pred chhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc
Confidence 99999999999997 66322110 000000000 0011000 011123567899999999999999
Q ss_pred CHHHHHhc
Q 000880 722 SATELLQD 729 (1239)
Q Consensus 722 ta~eiL~~ 729 (1239)
|+.++++.
T Consensus 940 t~~evl~~ 947 (968)
T PLN00113 940 CANDVLKT 947 (968)
T ss_pred CHHHHHHH
Confidence 99999875
No 423
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-29 Score=285.33 Aligned_cols=197 Identities=29% Similarity=0.492 Sum_probs=170.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC------chhHHHHHHHHHHHHhcC---CCceeeeeeeee
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQ---HQHVVRYYQAWF 493 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~L~---HpnIv~l~~~~~ 493 (1239)
..+|..++.||.|+||.|++|.++.+...|+||.|.+...- .+....+--|+.+|+.|+ |+||+++++.|
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF- 638 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF- 638 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee-
Confidence 56799999999999999999999999999999999754311 111224667999999997 99999999887
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-C-CHHHHHHhcCCCCHHHHHHHHHHH
Q 000880 494 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQI 571 (1239)
Q Consensus 494 e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-g-sL~~~l~~~~~l~~~~~~~i~~qI 571 (1239)
++..++||+||-.+ | +|.+++.....+++.++..|++||
T Consensus 639 ---------------------------------------Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV 679 (772)
T KOG1152|consen 639 ---------------------------------------EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQV 679 (772)
T ss_pred ---------------------------------------ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHH
Confidence 34678999999985 5 899999999999999999999999
Q ss_pred HHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 000880 572 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 651 (1239)
Q Consensus 572 ~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 651 (1239)
+.|+++||++||||||||-+|++++.+|-+||+|||.|...+.. ....++||..|.|||++.|
T Consensus 680 ~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg-----------------pfd~f~gtv~~aapevl~g 742 (772)
T KOG1152|consen 680 VAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG-----------------PFDVFVGTVDYAAPEVLGG 742 (772)
T ss_pred HhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCC-----------------CcceeeeeccccchhhhCC
Confidence 99999999999999999999999999999999999999865322 1245799999999999999
Q ss_pred CCCCCcchhhHHHHHHHHHhhc---CCc
Q 000880 652 WPKIDEKADMYSLGIVFFELWH---PFS 676 (1239)
Q Consensus 652 ~~~~~~ksDIwSlGviL~ELlt---Pf~ 676 (1239)
.+..+..-|||++||+||-++. ||+
T Consensus 743 ~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 743 EKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CccCCCcchhhhhhheeeEEEeccCCCc
Confidence 7777899999999999999874 664
No 424
>PRK12325 prolyl-tRNA synthetase; Provisional
Probab=99.95 E-value=1.8e-26 Score=276.41 Aligned_cols=371 Identities=11% Similarity=0.090 Sum_probs=242.0
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ecc--CCCccccccEEEEeccCCCeeeecC---CC
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSH---EL 852 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~~~~~~D~~G~~l~LRP---D~ 852 (1239)
..+.|+.+|+|....+++.|++.+++.+.++||++|.||.| ++. ++++...++||+|.|.+++.++||| ++
T Consensus 34 ~~~~G~~~~lP~g~~i~~~i~~~i~~~~~~~G~~ev~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~~~L~Pt~e~~ 113 (439)
T PRK12325 34 QQAAGIYSWLPLGLKVLKKIENIVREEQNRAGAIEILMPTIQPADLWRESGRYDAYGKEMLRIKDRHDREMLYGPTNEEM 113 (439)
T ss_pred ccCCceEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhheEEecCCCCEEEEcCCCcHH
Confidence 35899999999999999999999999999999999999999 222 3356788999999999999999999 77
Q ss_pred cHHHHHHHHh-CCCCceeEEeecCeEEcC-CCCC---CCCceeEEeEEEeCCCC---cccHHHHHHHHHHHHHhcCCCCc
Q 000880 853 RLPFIRWAIS-NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGAS---ALTEAEVLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 853 T~~iaR~~~~-~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~s---~~aDaEvi~la~~~l~~lgi~~~ 924 (1239)
|++++|.... ++..|+|+||+|+|||+| +|+. |.+||+|-++.+|+.+. ..+..+++.+..++++.||+..
T Consensus 114 ~~~~~~~~~~syrdLPlrl~q~~~~fR~E~~~~~GL~R~reF~~~D~h~f~~~~~~a~~~~~~~~~~~~~i~~~lgl~~- 192 (439)
T PRK12325 114 ITDIFRSYVKSYKDLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDLDEEGARHSYNRMFVAYLRTFARLGLKA- 192 (439)
T ss_pred HHHHHHHHhhhchhhchHheEecCEecCCCCCCCCccccceEeEeccEEEeCCHHHHHHHHHHHHHHHHHHHHHcCCce-
Confidence 8888885554 567899999999999998 6664 45679999999998763 2466799999999999999974
Q ss_pred eEEEECcHHHHHHH-------HHHcCCCHHHHHHHHH-HHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHH
Q 000880 925 CDIHLNHGDLLEAI-------WSWAGIKAEHREKVAE-LLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQT 996 (1239)
Q Consensus 925 ~~i~lg~~~i~~~l-------l~~lgl~~~~~~~l~~-~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~ 996 (1239)
+.+.++... +.+. ....|-++. ..+. +.+... .. . .. ..+ . ..+..
T Consensus 193 ~~v~~~~~~-~gg~~s~ef~~~~~~Ge~~~---~~c~~~~~~~~-~~-~----~~-------------~~~--~-~~l~~ 246 (439)
T PRK12325 193 IPMRADTGP-IGGDLSHEFIILAETGESTV---FYDKDFLDLLV-PG-E----DI-------------DFD--V-ADLQP 246 (439)
T ss_pred EEEEEccCC-CCCCcceeeEeecCCCCceE---EEcCCchhhcc-CC-C----cc-------------cCC--H-HHHHH
Confidence 555554321 1000 000011000 0000 000000 00 0 00 000 0 11111
Q ss_pred HHHHhcCChhhHHHHHhccCCCChhHHHHHHHHH-HHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccc
Q 000880 997 VGLRFCGAADQALPRLRGALPADKPTRKALDELY-LRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1075 (1239)
Q Consensus 997 l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~l~-l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~ 1075 (1239)
++.. +......+ .++. -.+.....++ |+...++.. .|.+|.. +
T Consensus 247 ~l~~-----------~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~ie--vg~~~~l---g----------- 290 (439)
T PRK12325 247 IVDE-----------WTSLYAAT-------EEMHDEAAFAAVPEE--RRLSARGIE--VGHIFYF---G----------- 290 (439)
T ss_pred HHhh-----------hcccccch-------hhhhccCCCCcCCCc--ceeecceEE--EEeeecC---c-----------
Confidence 1100 00000000 0000 0000000011 222222222 3333332 1
Q ss_pred cccccccccchhhhccccccccccCCCCCCceeeeeccHHHHHhhCC-C-----CCcCCCCCCCceEEEEecC--CCccH
Q 000880 1076 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP-V-----DFKPVRNEAGTSVLVCSRG--GGGLL 1147 (1239)
Q Consensus 1076 ~i~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~-~-----~~~~~~~~~~~~v~v~~~~--~~~~~ 1147 (1239)
=+| .+.||.. +...-|....+--.-|++|++||+.+|. . +...+...+|.+|+|++.. ++...
T Consensus 291 -----~~y---s~~f~~~-y~d~~g~~~~i~~~~~GiGieRli~~l~e~~~d~~g~~~P~~iaP~qV~Iipi~~~~~~~~ 361 (439)
T PRK12325 291 -----TKY---SEPMNAK-VQGPDGKEVPVHMGSYGIGVSRLVAAIIEASHDDKGIIWPESVAPFKVGIINLKQGDEACD 361 (439)
T ss_pred -----ccc---cHhcCCE-EECCCCCEEeEEEeeeECCHHHHHHHHHHHhCccCCCcCCCCcCCeEEEEEecCCCCHHHH
Confidence 112 2333321 0111122222334467899999998885 2 3333334468899999983 25567
Q ss_pred HHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHH
Q 000880 1148 VERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1225 (1239)
Q Consensus 1148 ~~a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~ 1225 (1239)
.+|.+++..||+.|++|+++.. +.++++++++|+..|+|++|+||++|+++|+|+||++.++++..++++++++.++
T Consensus 362 ~~a~~i~~~L~~~Gi~v~~D~~-~~~lg~ki~~a~~~giP~~iiVG~~e~~~~~V~vr~r~~~~~~~v~~~el~~~i~ 438 (439)
T PRK12325 362 AACEKLYAALSAAGIDVLYDDT-DERPGAKFATMDLIGLPWQIIVGPKGLAEGKVELKDRKTGEREELSVEAAINRLT 438 (439)
T ss_pred HHHHHHHHHHHHCCCEEEEECC-CCCHhHHHHHHHHcCCCEEEEECCcccccCeEEEEEcCCCceEEEEHHHHHHHHh
Confidence 8999999999999999998776 6799999999999999999999999999999999999999999999999988764
No 425
>TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II. Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent groups. This group includes enzymes from Escherichia coli, Bacillus subtilis, Aquifex aeolicus, the spirochete Treponema pallidum, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae. The other group includes the Pro-specific domain of a human multifunctional tRNA ligase and the prolyl-tRNA synthetases from the Archaea, the Mycoplasmas, and the spirochete Borrelia burgdorferi.
Probab=99.95 E-value=9.2e-27 Score=284.97 Aligned_cols=430 Identities=12% Similarity=0.102 Sum_probs=266.4
Q ss_pred ccccccccCCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ecc--CCCccccccEEEEeccCCCeee
Q 000880 774 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLE 847 (1239)
Q Consensus 774 ~~~~~~ld~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~~~~~~D~~G~~l~ 847 (1239)
.++.++ ..+.|+.+|+|...++++.|++.+++.+.++||++|.||.| ++. +.++...++||+|.|++|+.++
T Consensus 28 rag~i~--~~~~G~~~~lP~g~rv~~~I~~~i~~~~~~~G~~ei~~P~l~~~el~~~sg~~~~~~~emf~~~dr~~~~l~ 105 (568)
T TIGR00409 28 RAGFIR--RLGSGLYNWLPLGLRVLKKVENIVREEMNKDGAIEVLLPALQPAELWQESGRWDTYGPELLRLKDRKGREFV 105 (568)
T ss_pred hCCCcc--ccCCceEEECChHHHHHHHHHHHHHHHHHHcCCEEEECCccchHHHHhhcCCCCccchhcEEEecCCCCEEE
Confidence 345443 56799999999999999999999999999999999999999 222 2356678999999999999999
Q ss_pred ecCC----CcHHHHHHHHhCCCCceeEEeecCeEEcC-CCCCC---CCceeEEeEEEeCCCCcccHHHHHHH---HHHHH
Q 000880 848 LSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEAEVLKV---TMDIV 916 (1239)
Q Consensus 848 LRPD----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e-~~~~~---~~ef~Q~GvEiiG~~s~~aDaEvi~l---a~~~l 916 (1239)
|||+ +|..++|.+.+++..|+|+||+|++||+| +|+.| .+||+|.|+++||.+...+|+|+..+ ..+++
T Consensus 106 LrPT~Ee~~t~~~~~~i~syr~LPlrlyqi~~~fR~E~rpr~Gl~R~REF~~~d~~~f~~~~~~a~~e~~~~~~~y~~if 185 (568)
T TIGR00409 106 LGPTHEEVITDLARNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEESLDATYQKMYQAYSNIF 185 (568)
T ss_pred EcCCCcHHHHHHHHHHHhhccccCeEEEEeeCEeeCCCCCCCCccccccEEEEEEEEEeCChHHHHHHHHHHHHHHHHHH
Confidence 9997 88888889888888899999999999998 88864 45799999999999989999888755 59999
Q ss_pred HhcCCCCceEEEECcHHHHHHHHH------------------HcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHH
Q 000880 917 TRFFHAESCDIHLNHGDLLEAIWS------------------WAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRR 978 (1239)
Q Consensus 917 ~~lgi~~~~~i~lg~~~i~~~ll~------------------~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~ 978 (1239)
++||+. |.+..++++.+.+... .++...+...+.. . ......... ...+
T Consensus 186 ~~LgL~--~~~v~~~~g~~gg~~s~ef~~~~~~ge~~i~~c~~~~y~an~e~a~~--~--~~~~~~~~~---~~~~---- 252 (568)
T TIGR00409 186 SRLGLD--FRPVQADSGAIGGSASHEFMVLAESGEDTIVYSDESDYAANIELAEA--L--APGERNAPT---AELD---- 252 (568)
T ss_pred HHhCCc--ceEEEeccccCCCccceEEeEecCCCceEEEEecCcccchhhhhhcc--c--Ccccccccc---ccce----
Confidence 999994 8888777655433211 0111110000000 0 000000000 0000
Q ss_pred HHHHhcCCCHHHHHHHHHHHH------------------------HhcCChhhHHHHHhccCCC----ChhHHHHHHHH-
Q 000880 979 QLLQELNLAEAVVNRLQTVGL------------------------RFCGAADQALPRLRGALPA----DKPTRKALDEL- 1029 (1239)
Q Consensus 979 ~l~~~~~l~~~~~~~l~~l~~------------------------~~~g~~~~~l~~l~~~~~~----~~~~~~~l~~l- 1029 (1239)
.+. --....++.+..++. .+.|+.+--..+++..+.. .....+.+...
T Consensus 253 -~~~--tp~~~ti~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~v~~rgd~~vn~~k~~~~~g~~~~~~~a~~~~~~~~~ 329 (568)
T TIGR00409 253 -KVD--TPNTKTIAELVECFNLPAEKVVKTLLVKAVDKSEPLVALLVRGDHELNEVKAPNLLLVAQVLELATEEEIFQKI 329 (568)
T ss_pred -eec--CCCCCcHHHHHHHhCCCHhHeeeEEEEEecCCccceEEEEecCcchhhHHHHHHHhccCcccccCCHHHHHHhh
Confidence 000 000111222222210 1123222222222222100 00111111111
Q ss_pred -----HHHHccCc--ccEEEccCCCCCCCc----------cceeEEE----------E--EecCCCCcc--------ccc
Q 000880 1030 -----YLRIWRIE--KNIYIDALMPPIESY----------HRNLFFQ----------V--FSVKEKYPA--------TLV 1072 (1239)
Q Consensus 1030 -----~l~~~~~~--~~i~~Dl~~~rgl~Y----------YtG~vFe----------~--~~~~~~~~~--------~~~ 1072 (1239)
++.-.|+. -++..|.+....-++ |++..+. + ...|...|. +.-
T Consensus 330 g~~~g~~gpv~~~~~~~i~~D~~~~~~~~~~~gan~~~~h~~~~~~~rd~~~~~~~d~~~~~eGd~cp~c~~~l~~~rgI 409 (568)
T TIGR00409 330 ASGPGSLGPVNINGGIPVLIDQTVALMSDFAAGANADDKHYFNVNWDRDVAIPEVADIRKVKEGDPSPDGQGTLKIARGI 409 (568)
T ss_pred CCCCCccCccccccCceEEechhhhcccccccccCCCCceeecccccccCCccccchhhhhhccCCCCCCCCcccccceE
Confidence 11111111 134555554333333 2222211 0 001111110 000
Q ss_pred ccc-cccccccccchhhhccccccccccCCCCCCceeeeeccHHHHHhhCC------CCCcCCCCCCCceEEEEecCCC-
Q 000880 1073 EGT-LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP------VDFKPVRNEAGTSVLVCSRGGG- 1144 (1239)
Q Consensus 1073 ~~~-~i~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L~------~~~~~~~~~~~~~v~v~~~~~~- 1144 (1239)
+.+ ..--|=||-.- ||.. +...-|+..++...-++||++||+.++- .+..++...+|.+|.|++....
T Consensus 410 EvGhiF~LG~kYS~~---~~~~-~~d~~g~~~~~~mgcyGIGvsRli~aiie~~~D~~Gl~wP~~iAP~qV~Iip~~~~~ 485 (568)
T TIGR00409 410 EVGHIFQLGTKYSEA---LKAT-FLDENGKNQFMTMGCYGIGVSRLVSAIAEQHHDERGIIWPKAIAPYDVVIVVMNMKD 485 (568)
T ss_pred EEEEeccchhhhHHh---cCCE-EECCCCCEEEEEEeCCcchHHHHHHHHHHHhCccCCCcCChhhCCeEEEEEEcCCCh
Confidence 111 11123455433 3221 1112233333344455799999977762 3445555678999999987422
Q ss_pred -ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHH
Q 000880 1145 -GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRF 1223 (1239)
Q Consensus 1145 -~~~~~a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~ 1223 (1239)
+....|.++.+.|.+.|++|.++.. +.+++++++.|+..|+|+.|+||.+++++|+|+|+++.++++..|+++++++.
T Consensus 486 ~~~~~~a~~l~~~L~~~gi~v~~DDr-~~~~G~K~~dadliGiP~~i~vG~~~l~~~~Vei~~R~~~~~~~v~~~~l~~~ 564 (568)
T TIGR00409 486 EEQQQLAEELYSELLAQGVDVLLDDR-NERAGVKFADSELIGIPLRVVVGKKNLDNGEIEVKKRRNGEKQLIKKDELVEC 564 (568)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECC-CCCHHHHHHhhhhcCCCEEEEECCCcccCCeEEEEEcCCCceEEEEHHHHHHH
Confidence 4566788899999999999997776 56899999999999999999999999999999999999999999999999988
Q ss_pred HHH
Q 000880 1224 LLD 1226 (1239)
Q Consensus 1224 i~~ 1226 (1239)
|..
T Consensus 565 i~~ 567 (568)
T TIGR00409 565 LEE 567 (568)
T ss_pred Hhh
Confidence 754
No 426
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.7e-25 Score=239.22 Aligned_cols=212 Identities=38% Similarity=0.710 Sum_probs=181.3
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCcc
Q 000880 432 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTL 511 (1239)
Q Consensus 432 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~~ 511 (1239)
||.|++|.||++....+|+.+++|++....... ....+.+|+..++.++|++|+++++.+..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------------- 62 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFED----------------- 62 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeec-----------------
Confidence 689999999999998889999999987543321 34679999999999999999999987632
Q ss_pred cccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 000880 512 ASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 589 (1239)
Q Consensus 512 ~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLK 589 (1239)
....+++||+++ ++|.+++... ..++...++.++.+++.++.|||++|++|+||+
T Consensus 63 -----------------------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~ 119 (215)
T cd00180 63 -----------------------ENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLK 119 (215)
T ss_pred -----------------------CCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 256799999998 6999998766 578999999999999999999999999999999
Q ss_pred cccEEEcC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHH
Q 000880 590 PNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 668 (1239)
Q Consensus 590 p~NILl~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL 668 (1239)
|.||+++. ++.++|+|||.+........ ......++..|++||.+.....++.++|+|++|+++
T Consensus 120 ~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~ 184 (215)
T cd00180 120 PENILLDSDNGKVKLADFGLSKLLTSDKS---------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184 (215)
T ss_pred HhhEEEeCCCCcEEEecCCceEEccCCcc---------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHH
Confidence 99999999 89999999999986432210 113346788999999987733688999999999999
Q ss_pred HHhhcCCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 000880 669 FELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 730 (1239)
Q Consensus 669 ~ELltPf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 730 (1239)
++| ..+.+++..|++.||.+||++.++++++
T Consensus 185 ~~l-------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 185 YEL-------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHH-------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 999 4788899999999999999999999763
No 427
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=8.2e-27 Score=261.44 Aligned_cols=267 Identities=24% Similarity=0.391 Sum_probs=196.4
Q ss_pred cCCceEEeeeccCCceEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCcc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~ 498 (1239)
.+.|..+.+||.|.|++||++.+.. .++.||+|.|..... ..++.+|++.|..+ -|.||+++.+|+-
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~r----- 105 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFR----- 105 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhc-----
Confidence 3678889999999999999999887 688999999875433 34689999999999 6899999998872
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
......+||||.+. ...+++.. ++-.++..|++.++.||+|
T Consensus 106 -----------------------------------nnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~ 147 (418)
T KOG1167|consen 106 -----------------------------------NNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAH 147 (418)
T ss_pred -----------------------------------cCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhh
Confidence 35678999999986 56666543 6688999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCC-CCEEEeecCcchhcccccc---ccC----CCCC-------C-------CCCCc-----
Q 000880 578 IHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQL---DQD----AAFP-------T-------DTGGV----- 630 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~-~~vKL~DFGlA~~~~~~~~---~~~----~~~~-------~-------~~~~~----- 630 (1239)
+|.+|||||||||+|+|.+.. +.-.|.|||+|........ ... ...+ . ...+.
T Consensus 148 ~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~ 227 (418)
T KOG1167|consen 148 LHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCN 227 (418)
T ss_pred hhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccC
Confidence 999999999999999999865 6788999999984321110 000 0001 0 00000
Q ss_pred ---cccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHH-HHH------------HHhhhhc
Q 000880 631 ---SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER-QIV------------LSDLKQK 691 (1239)
Q Consensus 631 ---~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~-~~~------------~~~~~~~ 691 (1239)
...+-...||++|.|||++...+.-+.++||||.|||+.-+++ ||....+. ... .+.....
T Consensus 228 ~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~ 307 (418)
T KOG1167|consen 228 DGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALP 307 (418)
T ss_pred CCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcC
Confidence 0112345899999999999998889999999999999999985 77532210 000 0000000
Q ss_pred CC-----------------------------------CCCccccCCH-HHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 692 GE-----------------------------------LPPSWVAKFS-EQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 692 ~~-----------------------------------~p~~~~~~~~-e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
+. .+..+....+ .+.+|+.+||..||.+|.|++++|+||||...
T Consensus 308 g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 308 GRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred CceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00 0112222222 67899999999999999999999999999854
Q ss_pred h
Q 000880 736 E 736 (1239)
Q Consensus 736 ~ 736 (1239)
.
T Consensus 388 ~ 388 (418)
T KOG1167|consen 388 D 388 (418)
T ss_pred h
Confidence 3
No 428
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=9.8e-27 Score=301.38 Aligned_cols=198 Identities=25% Similarity=0.403 Sum_probs=141.7
Q ss_pred cEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccc
Q 000880 536 TYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 614 (1239)
Q Consensus 536 ~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~ 614 (1239)
..++.+|||++++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+||||+..+.+|++|||++.....
T Consensus 53 ~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 53 DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred chhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 457888999999999999753 4599999999999999999999999999999999999997655555555554433211
Q ss_pred cccc-----------------cC--CCCCC-CCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhcC
Q 000880 615 EQLD-----------------QD--AAFPT-DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP 674 (1239)
Q Consensus 615 ~~~~-----------------~~--~~~~~-~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltP 674 (1239)
.... .. ..... ............+||+.|||||++.+ ..|+.++|||||||+||||++|
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG-SSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc-CCCCchhhhhhHHHHHHHHhhC
Confidence 0000 00 00000 00000111233579999999999987 5689999999999999999997
Q ss_pred CchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 000880 675 FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 735 (1239)
Q Consensus 675 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 735 (1239)
+.+.......+..+.. ...|+......+...+++.+||++||.+||++.++++|||+...
T Consensus 212 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 212 VSSREEKSRTMSSLRH-RVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CCchhhHHHHHHHHHH-hhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 7665443333332221 22333333445677899999999999999999999999999764
No 429
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.93 E-value=4.5e-26 Score=250.49 Aligned_cols=249 Identities=17% Similarity=0.215 Sum_probs=196.4
Q ss_pred CCceEEeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.+++....+-+|.||.||.|.|+.. .+.|-+|.++ ...+.-....++.|...|..+.|||+.++.+.+.+.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk-~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~--- 359 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVK-QHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED--- 359 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHH-hcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec---
Confidence 4567777899999999999988743 2346677665 334555667899999999999999999999988653
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhc--------CCCCHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFR 569 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~~~~~~~i~~ 569 (1239)
....++++.+++ |+|..++... ..++..+...++.
T Consensus 360 ------------------------------------~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~mas 403 (563)
T KOG1024|consen 360 ------------------------------------YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMAS 403 (563)
T ss_pred ------------------------------------cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHH
Confidence 234577788887 7999988722 2377888899999
Q ss_pred HHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 000880 570 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 649 (1239)
Q Consensus 570 qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 649 (1239)
|++.||+|||++|+||.||..+|++|++...+||+|=.+++.+-+.+. .+-+.+.-....|||||.+
T Consensus 404 Qla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DY-------------hcLGDnEnRPvkWMslEal 470 (563)
T KOG1024|consen 404 QLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDY-------------HCLGDNENRPVKWMSLEAL 470 (563)
T ss_pred HHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccc-------------cccCCCCCCcccccCHHHH
Confidence 999999999999999999999999999999999999999986533221 1111222345679999999
Q ss_pred cCCCCCCcchhhHHHHHHHHHhhc----CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 000880 650 QGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 725 (1239)
Q Consensus 650 ~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 725 (1239)
+. ..|+.++|+|||||+||||+| |+..-++.+..... ..+.....+.+++.++..+|..||..+|++||+++|
T Consensus 471 ~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl--kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q 547 (563)
T KOG1024|consen 471 QN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL--KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQ 547 (563)
T ss_pred hh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH--hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence 98 689999999999999999996 88766554433222 244444455677889999999999999999999999
Q ss_pred HHh
Q 000880 726 LLQ 728 (1239)
Q Consensus 726 iL~ 728 (1239)
+..
T Consensus 548 lv~ 550 (563)
T KOG1024|consen 548 LVI 550 (563)
T ss_pred HHH
Confidence 875
No 430
>PRK04173 glycyl-tRNA synthetase; Provisional
Probab=99.93 E-value=1.7e-25 Score=267.89 Aligned_cols=322 Identities=15% Similarity=0.115 Sum_probs=225.1
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHHHH--cCCccccccce------eccCCCccccccEEEEe--------c-------
Q 000880 784 NTSSIQYSDLDTELRDYVVQVTKEMFRQ--HCAKHLEIEPM------YLLGDCPQFKRNTVKLL--------T------- 840 (1239)
Q Consensus 784 ~~G~~D~lp~ea~~~~~i~~~i~~~f~~--~Gy~~I~tP~~------~~~~~~~~~~~~~~~~~--------D------- 840 (1239)
..|+.|++|..+.+++.|++.|++.|.. +||.+|.||++ ..+|+.+.+.+.||... |
T Consensus 27 ~~g~~d~~P~G~~l~~~i~~~~r~~~~~~~~~~~ev~tp~i~~~~l~~~SGH~~~f~d~m~~~~~~~~~~r~d~~~~~~~ 106 (456)
T PRK04173 27 LAGFWDYGPLGVELKNNIKRAWWKSFVQEREDVVGIDSPIIMPPEVWEASGHVDNFSDPLVECKKCKKRYRADHLIEELG 106 (456)
T ss_pred hhcccccChhhHHHHHHHHHHHHHHHHhccCCEEEEeccccCCHHHHhhcCCccccCCceeEeCCCCCEeechhhhHHHh
Confidence 5799999999999999999999999988 89999999999 33455566666666653 1
Q ss_pred ------------------------------------------------cCCCeeeecCCCcH----HHHHHHHhCC-CCc
Q 000880 841 ------------------------------------------------HGGDLLELSHELRL----PFIRWAISNQ-KSS 867 (1239)
Q Consensus 841 ------------------------------------------------~~G~~l~LRPD~T~----~iaR~~~~~~-~~P 867 (1239)
.++..+.||||..- .+.+.+-+++ ..|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~m~cp~~~~~~~~~~~~f~l~f~~~~g~~~~~~~~~~lRpetaqg~~~~f~~~~~syr~dLP 186 (456)
T PRK04173 107 IDAEGLSNEELKELIRENDIKCPECGGENWTEVRQFNLMFKTFIGPVEDSKSLGYLRPETAQGIFVNFKNVLRTARKKLP 186 (456)
T ss_pred hhhccccHHHHHHHHHHhCCCCCCCCCCCCcCccchhhceeecccCccCCCcceeeccccchhHHHHHHHHHHhccccCC
Confidence 11224567886552 2445565666 779
Q ss_pred eeEEeecCeEEcCCCCC----CCCceeEEeEEEeCCCCcccHH--HHHHHHHHHHHhcCCCCceEEEECcHHHHHHHHHH
Q 000880 868 FKRYEISSVYRRAIGHS----PPNRYLQGDFDIIGGASALTEA--EVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSW 941 (1239)
Q Consensus 868 ~r~~Y~g~VfR~e~~~~----~~~ef~Q~GvEiiG~~s~~aDa--Evi~la~~~l~~lgi~~~~~i~lg~~~i~~~ll~~ 941 (1239)
+|++++|+|||+|.... |.+||+|.++++|+.++...+. .+|.++.+++..||+..
T Consensus 187 lr~aq~g~~~RnE~s~~~gL~RvReF~q~e~hiF~~peq~~~e~~~~l~~~~~~l~~lG~~~------------------ 248 (456)
T PRK04173 187 FGIAQIGKSFRNEITPRNFIFRTREFEQMELEFFVKPGTDNEWFAYWIELRKNWLLDLGIDP------------------ 248 (456)
T ss_pred eeeeEEchhHhCccCCCCCceeeceeeeeEEEEEECcChHHHHHHHHHHHHHHHHHHcCCCc------------------
Confidence 99999999999986432 4467999999999987743111 22333333333333321
Q ss_pred cCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChh
Q 000880 942 AGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKP 1021 (1239)
Q Consensus 942 lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~ 1021 (1239)
T Consensus 249 -------------------------------------------------------------------------------- 248 (456)
T PRK04173 249 -------------------------------------------------------------------------------- 248 (456)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCC-CCcccccccccccccccccchhh--hccccccccc
Q 000880 1022 TRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE-KYPATLVEGTLLAVGGRYDYLLH--RMWDREYVGY 1098 (1239)
Q Consensus 1022 ~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~-~~~~~~~~~~~i~~GGRYD~L~~--~fg~~~~~~~ 1098 (1239)
.++.++....++++||++.+|++.+... +. .-.....+++||+|| |.. .|++.+ +.+
T Consensus 249 ----------------~~~~~s~~~~~e~~~ys~~~wd~e~~~~~g~--~~~e~~g~~~~~dyd-L~~~~~~s~~d-l~y 308 (456)
T PRK04173 249 ----------------ENLRFREHLPEELAHYSKATWDIEYKFPFGR--FWGELEGIANRTDYD-LSRHSKHSGED-LSY 308 (456)
T ss_pred ----------------cceEEEecCcchhhccHHHHHhHHHhCCCCC--cEEEEeeeeccchhh-cccchhhcCCC-eEE
Confidence 2355555555566666666665532110 10 000112478899999 653 343332 222
Q ss_pred c--C--CCCCCc-eeeeeccHHHH-HhhCCCC---------------CcCCCCCCCceEEEEecCCC-ccHHHHHHHHHH
Q 000880 1099 A--S--RTNPPS-GVGASLALETI-IQHYPVD---------------FKPVRNEAGTSVLVCSRGGG-GLLVERMELVAE 1156 (1239)
Q Consensus 1099 ~--g--~~~~~p-AvGfaigldrl-~~~L~~~---------------~~~~~~~~~~~v~v~~~~~~-~~~~~a~~ia~~ 1156 (1239)
. + .....| .+|+|+|+||| +.+|++. ..|. ..+|.+|+|++.+++ .....|.++++.
T Consensus 309 ~~~~~~~~~~~P~vi~~siGieRl~~ail~~~~~~~~~~~~~~r~~l~~P~-~lAP~qV~Iipi~~~~e~~~~A~~la~~ 387 (456)
T PRK04173 309 FDDETTGEKYIPYVIEPSAGLDRLLLAFLEDAYTEEELGGGDKRTVLRLPP-ALAPVKVAVLPLVKKEKLSEKAREIYAE 387 (456)
T ss_pred EecCCCCceeeeEEEEecccHHHHHHHHHHHHcccccccCCcceeEEECCC-cCCCCEEEEEEecCcHHHHHHHHHHHHH
Confidence 2 1 111234 55999999996 4444421 2343 357889999998632 367899999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHH
Q 000880 1157 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1227 (1239)
Q Consensus 1157 Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~ 1227 (1239)
||+. ++|+++ . ..++++++++|++.|+|++|+||++|+++++|+||++.+++|..++++++++.+++.
T Consensus 388 LR~~-irVelD-~-~~slgkkir~A~~~Gip~~IIIG~~El~~g~VtvR~r~t~eq~~v~l~el~~~l~~~ 455 (456)
T PRK04173 388 LRKD-FNVDYD-D-SGSIGKRYRRQDEIGTPFCITVDFDTLEDNTVTIRDRDTMEQVRVKIDELKDYLAEK 455 (456)
T ss_pred HHhc-CEEEEe-C-CCCHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEEeHHHHHHHHHhh
Confidence 9999 999987 3 368999999999999999999999999999999999999999999999998888653
No 431
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.6e-26 Score=240.45 Aligned_cols=253 Identities=22% Similarity=0.348 Sum_probs=190.6
Q ss_pred CCCCCCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeee
Q 000880 415 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWF 493 (1239)
Q Consensus 415 ~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~ 493 (1239)
..++.-.+.+.|.+.+.||+|.||.+.+|+|+.+++.+|+|.+..... ...+|.+|...--.| .|.||+.-|..-+
T Consensus 15 ~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 15 EELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred ccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 344555667899999999999999999999999999999999875433 356799998765555 5899998776543
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHH
Q 000880 494 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIV 572 (1239)
Q Consensus 494 e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~ 572 (1239)
++ ..+++++||||| |+|..-+.. ..+-+.-...++.|++
T Consensus 92 qt---------------------------------------~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~ 131 (378)
T KOG1345|consen 92 QT---------------------------------------SDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLL 131 (378)
T ss_pred hc---------------------------------------CceEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHH
Confidence 32 457889999998 788877655 4588888999999999
Q ss_pred HHHHHHHhCCccccCCCcccEEEcC-C-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 000880 573 EGLAHIHGQGIIHRDLTPNNIFFDA-R-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 650 (1239)
Q Consensus 573 ~gL~yLHs~gIiHrDLKp~NILl~~-~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 650 (1239)
+|+.|+|++++||||||.+||||-. | ..|||||||+++..+.- -...-.+..|.+||...
T Consensus 132 SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t------------------V~~~~~~~~y~~pe~~~ 193 (378)
T KOG1345|consen 132 SAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT------------------VKYLEYVNNYHAPELCD 193 (378)
T ss_pred HHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce------------------ehhhhhhcccCCcHHHh
Confidence 9999999999999999999999953 3 46999999998754210 01123566799999754
Q ss_pred CC----CCCCcchhhHHHHHHHHHhhc---CCchhHHH-----HHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 000880 651 GW----PKIDEKADMYSLGIVFFELWH---PFSTAMER-----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 718 (1239)
Q Consensus 651 ~~----~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 718 (1239)
.. -...+.+|+|.|||++|.++| ||....-+ +-.....+.....|..+...++.+..+.++-|.++|+
T Consensus 194 ~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~ 273 (378)
T KOG1345|consen 194 TVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFK 273 (378)
T ss_pred hccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccc
Confidence 32 225678999999999999998 66422111 1111122234456777778888999999999999999
Q ss_pred CC---CCHHHHHh
Q 000880 719 DR---PSATELLQ 728 (1239)
Q Consensus 719 ~R---Pta~eiL~ 728 (1239)
+| .++.....
T Consensus 274 drcki~~~kk~rk 286 (378)
T KOG1345|consen 274 DRCKIWTAKKMRK 286 (378)
T ss_pred ccchhHHHHHHHH
Confidence 99 44444433
No 432
>TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I. Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent families. This family includes the archaeal enzyme, the Pro-specific domain of a human multifunctional tRNA ligase, and the enzyme from the spirochete Borrelia burgdorferi. The other family includes enzymes from Escherichia coli, Bacillus subtilis, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae.
Probab=99.92 E-value=2.7e-24 Score=259.12 Aligned_cols=325 Identities=9% Similarity=0.087 Sum_probs=224.9
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCC---CccccccEEEEeccC----CCeeeecC
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD---CPQFKRNTVKLLTHG----GDLLELSH 850 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~---~~~~~~~~~~~~D~~----G~~l~LRP 850 (1239)
..+.|+++|+|....+++.|++.+++.++++||++|.||.| ++... .+...++||.+.|.+ ++.++|||
T Consensus 25 ~~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~f~v~~~g~~~~~e~l~LrP 104 (472)
T TIGR00408 25 YPVKGCYVWLPYGFKIWKNIQKILRNILDEIGHEEVYFPMLIPESELAKEKDHIKGFEPEVYWITHGGLSKLDEPLALRP 104 (472)
T ss_pred cCCCceEEECcCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhhcchhhhcchhcEEEecCCCCccCCcEEEeC
Confidence 35799999999999999999999999999999999999999 33322 344588999999987 48999999
Q ss_pred CCcHHHHHHHHh----CCCCceeEEeecCeEEcCCCC----CCCCceeEEeEEEeCCCCcccHH---HHHHHHHHHHH-h
Q 000880 851 ELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALTEA---EVLKVTMDIVT-R 918 (1239)
Q Consensus 851 D~T~~iaR~~~~----~~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~s~~aDa---Evi~la~~~l~-~ 918 (1239)
+.|++++.+++. ++..|+|+|++|+|||+|.++ .|.+||+|.+++.+-.....++. +++.+..++++ .
T Consensus 105 t~e~~i~~~~~~~i~S~rdLPlr~~q~~~vfR~E~~~~~gl~R~rEF~~~e~h~~~~~~e~a~~e~~~~l~~y~~i~~~~ 184 (472)
T TIGR00408 105 TSETAMYPMFKKWVKSYTDLPLKINQWVNVFRYETKHTRPFLRTREFTWQEAHTAHATAEEAEEQVLRALDIYKEFIENS 184 (472)
T ss_pred CCcHHHHHHHhccccChhhcCHHHhheeeeecCCCCCCCCcceeeeeehhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999955544 456799999999999998764 35567999999843333333333 45566666665 6
Q ss_pred cCCCCceEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 000880 919 FFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 998 (1239)
Q Consensus 919 lgi~~~~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~ 998 (1239)
||+. +.+... ++ + ++
T Consensus 185 lglp--~~~~~~--------------~~-~-----------ek------------------------------------- 199 (472)
T TIGR00408 185 LAIP--YFVGRK--------------PE-W-----------EK------------------------------------- 199 (472)
T ss_pred cCCe--EEEEec--------------Cc-h-----------hh-------------------------------------
Confidence 6663 322110 00 0 00
Q ss_pred HHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCccccccccccc
Q 000880 999 LRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLA 1078 (1239)
Q Consensus 999 ~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~ 1078 (1239)
+.|.. ....++..+.-|-..-.|++|.. +.
T Consensus 200 --~~ga~--------------------------------~~~~~e~~~~dgr~~q~~t~~~L---g~------------- 229 (472)
T TIGR00408 200 --FAGAE--------------------------------YTWAFETIMPDGRTLQIATSHNL---GQ------------- 229 (472)
T ss_pred --cCCcc--------------------------------ceEEEeEEEcCCCEEEEeeeecc---cc-------------
Confidence 00000 00111111111111123333322 00
Q ss_pred ccccccchhhhccccccccccC-CCCCCceeeeeccH-HHHHhhC-----C-CCCcCCCCCCCceEEEEec--CC---Cc
Q 000880 1079 VGGRYDYLLHRMWDREYVGYAS-RTNPPSGVGASLAL-ETIIQHY-----P-VDFKPVRNEAGTSVLVCSR--GG---GG 1145 (1239)
Q Consensus 1079 ~GGRYD~L~~~fg~~~~~~~~g-~~~~~pAvGfaigl-drl~~~L-----~-~~~~~~~~~~~~~v~v~~~--~~---~~ 1145 (1239)
++.++|+-. +.+ .+......-+++|+ +|++.+| + .+...+...+|.+|+|+++ ++ +.
T Consensus 230 ------~~sk~f~i~----y~~~~g~~~~~h~~s~Gi~eRli~~lie~~~d~~gl~~P~~iaP~qV~Iipi~~~~~~~~~ 299 (472)
T TIGR00408 230 ------NFAKTFEIK----FETPTGDKEYAYQTSYGISTRVIGALIAIHSDEKGLVLPPRVAPIQVVIIPIIFKKKENEK 299 (472)
T ss_pred ------cccHhcCCE----EECCCCCEEeeEEccccHHHHHHHHHHHHhCCCCceeeChhhCcceEEEEEccCCCCCCHH
Confidence 122222211 111 11222344477887 9998887 2 2322233457889999996 32 24
Q ss_pred cHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHH
Q 000880 1146 LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1225 (1239)
Q Consensus 1146 ~~~~a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~ 1225 (1239)
....|.++++.||+.|++|+++.. +.++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++++.+.
T Consensus 300 ~~~~A~~l~~~Lr~~girv~lD~r-~~s~gkk~k~Ae~~GvP~~IiIG~~Ele~~~V~ik~rdt~eq~~v~l~el~~~l~ 378 (472)
T TIGR00408 300 VMEAAREVRSRLKKAGFRVHIDDR-DNRPGRKFYQWEIKGIPLRIEVGPNDIEKNIAVISRRDTGEKYQVSLDQLEERVV 378 (472)
T ss_pred HHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEECcchhhCCeEEEEECCCCceEEEEHHHHHHHHH
Confidence 688999999999999999998876 4599999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhc
Q 000880 1226 DAIASQF 1232 (1239)
Q Consensus 1226 ~~l~~~~ 1232 (1239)
++++...
T Consensus 379 ~~l~~~~ 385 (472)
T TIGR00408 379 ELLNNIQ 385 (472)
T ss_pred HHHHHHH
Confidence 7776543
No 433
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=8e-24 Score=230.56 Aligned_cols=209 Identities=33% Similarity=0.569 Sum_probs=170.8
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCc
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++.+..
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~----------- 68 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFED----------- 68 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeec-----------
Confidence 56778999999999999999988999999998754332 245688899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~-l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....++++||+++ +|.+++..... +++..++.++.+++.++.|||++++
T Consensus 69 -----------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 119 (225)
T smart00221 69 -----------------------------PEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI 119 (225)
T ss_pred -----------------------------CCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 2467899999986 99999987766 8999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
+|+||+|.||+++.++.++|+|||++........ .......++..|++||.+.+...++.++|+||
T Consensus 120 ~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~ 185 (225)
T smart00221 120 VHRDLKPENILLGMDGLVKLADFGLARFIHRDLA--------------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWS 185 (225)
T ss_pred ecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc--------------ccccceeccCCcCCHhHhcCCCCCCchhhHHH
Confidence 9999999999999999999999999986532210 01234578889999999833356788999999
Q ss_pred HHHHHHHhhc---CCch-hHHHHHHHHhhh
Q 000880 664 LGIVFFELWH---PFST-AMERQIVLSDLK 689 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~-~~~~~~~~~~~~ 689 (1239)
||+++|+|++ ||.. ..+.......+.
T Consensus 186 lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 186 LGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred HHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 9999999996 7865 344444444443
No 434
>PRK08661 prolyl-tRNA synthetase; Provisional
Probab=99.91 E-value=3.4e-23 Score=250.29 Aligned_cols=325 Identities=12% Similarity=0.110 Sum_probs=224.5
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ecc---CCCccccccEEEEeccC----CCeeeecCCC
Q 000880 784 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHG----GDLLELSHEL 852 (1239)
Q Consensus 784 ~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~~~~~~D~~----G~~l~LRPD~ 852 (1239)
+.|+.+++|..+.+++.|++.+++.|+++||++|.||+| ++. ++.+...++||.+.+.+ ++.++|||+.
T Consensus 33 v~G~~~~~P~g~~i~~~i~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~~~v~~~~~~~~~e~l~LrPts 112 (477)
T PRK08661 33 VKGCMVIKPYGYAIWENIQKILDKLFKETGHENVYFPLLIPESLLEKEKEHVEGFAPEVAWVTHGGGEKLEEKLALRPTS 112 (477)
T ss_pred CCceEEECccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhhcCchhhcccccEEEEccCCCccCceEEEecCC
Confidence 689999999999999999999999999999999999999 332 23455689999999877 5689999998
Q ss_pred ----cHHHHHHHHhCCCCceeEEeecCeEEcCCCCC---CCCceeEEeEEEeCCCCcccHHH---HHHHHHHHH-HhcCC
Q 000880 853 ----RLPFIRWAISNQKSSFKRYEISSVYRRAIGHS---PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIV-TRFFH 921 (1239)
Q Consensus 853 ----T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~---~~~ef~Q~GvEiiG~~s~~aDaE---vi~la~~~l-~~lgi 921 (1239)
|..++|.+.+++..|+|+|++|+|||+|.... |.+||+|.+.+.+-.....++.| ++.+..+++ +.||+
T Consensus 113 E~~i~~~~~~~i~SyrdLPlrl~q~~~vfR~E~~~rgl~R~rEF~~~E~h~~~~~~eea~~e~~~~l~~y~~i~~~~Lgl 192 (477)
T PRK08661 113 ETIIYPMYKKWIQSYRDLPLLYNQWVNVVRWETKTRPFLRTREFLWQEGHTAHATEEEAEEETLEMLEIYKEFFEDYLAI 192 (477)
T ss_pred cHHHHHHHHhhhcchhhcCHHHhcccceeeCCCCCCCcceeeeEEEcceeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 78888888888778999999999999976543 45579999999865444444443 445555555 55555
Q ss_pred CCceEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHh
Q 000880 922 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 1001 (1239)
Q Consensus 922 ~~~~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~ 1001 (1239)
. +.+..- ++ ++ .+
T Consensus 193 p--~~~~~~--------------~~--------------------------~e---------------------kf---- 205 (477)
T PRK08661 193 P--VIIGKK--------------TE--------------------------WE---------------------KF---- 205 (477)
T ss_pred e--EEEEec--------------Ch--------------------------HH---------------------hh----
Confidence 3 211110 00 00 00
Q ss_pred cCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccccccccccccc
Q 000880 1002 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1081 (1239)
Q Consensus 1002 ~g~~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GG 1081 (1239)
.|. .....+|..+..|-..-.|++|..- .
T Consensus 206 ~ga--------------------------------~~~~~ie~~~~dgr~~q~gt~~~Lg---~---------------- 234 (477)
T PRK08661 206 AGA--------------------------------DYTYTIEAMMPDGKALQAGTSHYLG---Q---------------- 234 (477)
T ss_pred CCC--------------------------------cceeEEEEEeCCCCEEEEEEecccc---c----------------
Confidence 010 0011222222223233344444221 0
Q ss_pred cccchhhhccccccccccCCCCCCceeeeeccH-HHHHhhCC------CCCcCCCCCCCceEEEEecC-----CCccHHH
Q 000880 1082 RYDYLLHRMWDREYVGYASRTNPPSGVGASLAL-ETIIQHYP------VDFKPVRNEAGTSVLVCSRG-----GGGLLVE 1149 (1239)
Q Consensus 1082 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigl-drl~~~L~------~~~~~~~~~~~~~v~v~~~~-----~~~~~~~ 1149 (1239)
++.++|+-. +...-|... ...=.++|+ +|++.+|- .+...+...+|.+|+|++.. .+.....
T Consensus 235 ---~~s~~f~i~-y~d~~g~~~--~v~~~s~G~~~R~i~alie~~~D~~Gl~lP~~iAP~qV~Iipi~~~~~~~~~~~~~ 308 (477)
T PRK08661 235 ---NFAKAFDIK-FQDKDGKLE--YVHQTSWGVSTRLIGALIMTHGDDKGLVLPPKIAPIQVVIVPIFKKEEKKEEVLEY 308 (477)
T ss_pred ---chhHhcCCE-EECCCCCEe--eeEEecccHHHHHHHHHHHHhCccCCCccCcccCCCeEEEEEecCCCcCCHHHHHH
Confidence 112222211 000011111 122224554 99987763 22222334568899999982 1456788
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHH
Q 000880 1150 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1229 (1239)
Q Consensus 1150 a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~ 1229 (1239)
|.++++.||+.|++|+++...+.++++++++|++.|+|++|+||++|+++|+|+|+++.++++..++++++++.+++.++
T Consensus 309 a~~l~~~Lr~~GirV~lD~r~~~s~gkK~~~ae~~GvP~~IiIG~~ele~~~V~ik~rdtgek~~v~~~el~~~l~~~l~ 388 (477)
T PRK08661 309 AKELAEELKKAGIRVKLDDRSDKTPGWKFNEWELKGVPLRIEIGPRDLENNTVVLVRRDTLEKETVPLDELVEKVPELLE 388 (477)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECcchhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHH
Confidence 99999999999999998873467999999999999999999999999999999999999999999999999999887776
Q ss_pred hhc
Q 000880 1230 SQF 1232 (1239)
Q Consensus 1230 ~~~ 1232 (1239)
...
T Consensus 389 ~~~ 391 (477)
T PRK08661 389 EIQ 391 (477)
T ss_pred HHH
Confidence 443
No 435
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.91 E-value=2.2e-25 Score=257.11 Aligned_cols=298 Identities=39% Similarity=0.667 Sum_probs=225.1
Q ss_pred CCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 419 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.+++.++|+....+|.|+||+|+.+..+.++..+|||.|..++.. ....+.++|+..+..+.|++|+++.++|...+..
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e-~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~~~ 122 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNRE-ESRSRVLREVSSLAEFEHPGIKRYFHAWYERPPL 122 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchh-hhhhhhhccccchhhhcccchhhheeceecCCCC
Confidence 688999999999999999999999999989999999999876543 3456788999999999999999999999887642
Q ss_pred ccCC---------C---------Cc--------------CCC----------------------Cc-----cc-------
Q 000880 499 DFDG---------D---------SM--------------WGS----------------------GT-----LA------- 512 (1239)
Q Consensus 499 ~~~~---------~---------~~--------------~~~----------------------g~-----~~------- 512 (1239)
.+.. . .+ |.+ +. ..
T Consensus 123 ~~qe~~d~~~l~~~~~~~~~~l~sl~~~~~~~~q~~~~~~~~~A~e~s~~~~~~~v~~~~~s~s~~~~~s~s~~~~~~~~ 202 (516)
T KOG1033|consen 123 GWQEEMDLKLLDDETSSERSNLPSLSERRTSKRQTAELPRVSAAAESSFHVFRAIVPVENQSHSQESSSSISQHNGSRSE 202 (516)
T ss_pred cccchhhhhhhhccCCcchhccccccchhccchhhhhcccccccchhhhccccccCchhhcccCcccccchhhcccchhh
Confidence 1000 0 00 000 00 00
Q ss_pred --------ccccccccc-------------------------------cc-------------------c--------cc
Q 000880 513 --------SSTFSNRAA-------------------------------SS-------------------A--------DV 526 (1239)
Q Consensus 513 --------s~~~~~~~~-------------------------------~~-------------------~--------~v 526 (1239)
...|..... +. . ++
T Consensus 203 ~rk~s~~k~~~~~~~~~tdsd~~ed~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~ 282 (516)
T KOG1033|consen 203 FRKTSVSKASRFEGPDCTDSDLEEDEMQGSDSKESSRHEESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADV 282 (516)
T ss_pred hhhhhhccccccCCCccccccccccccccCcccCcccccccccccccccccccccCCchhhhhcccchhhhhccchhhhc
Confidence 000000000 00 0 00
Q ss_pred --------------------------ccc-----------cccccccEEEEEeeccC-CCHHHHHHhcC---CCCHHHHH
Q 000880 527 --------------------------TGQ-----------ENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAW 565 (1239)
Q Consensus 527 --------------------------~~~-----------~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~~~~~~ 565 (1239)
... .......++||+|++|. .+|.+||.... ..+.....
T Consensus 283 d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~ 362 (516)
T KOG1033|consen 283 DSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLML 362 (516)
T ss_pred cchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHH
Confidence 000 00001247999999996 69999997543 36677888
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 000880 566 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 645 (1239)
Q Consensus 566 ~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 645 (1239)
.++.|++.|++| ++.+|||+||.||+...+..+||+|||+......... .......++..+||.+||+
T Consensus 363 ~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~---------~~~~~a~~t~~~gt~~Yms 430 (516)
T KOG1033|consen 363 DIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDET---------VAPAAASHTQQVGTLLYMS 430 (516)
T ss_pred HHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCc---------ccchhhhhhhcccccccCC
Confidence 999999999999 9999999999999999999999999999876432220 0111234677899999999
Q ss_pred cccccCCCCCCcchhhHHHHHHHHHhhcCCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 000880 646 PEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 725 (1239)
Q Consensus 646 PE~l~~~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 725 (1239)
||++.+ ..|+.++||||||+||+||+++|...+++...+..++ .+.+|+.+....|+...|+.+|+.+.|.+||++.+
T Consensus 431 PEQi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r-~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 431 PEQIRG-QQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIR-DGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred HHHHhh-hhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhh-cCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHH
Confidence 999998 6899999999999999999999999999988888887 67788777777788899999999999999997766
Q ss_pred HHhccC
Q 000880 726 LLQDAL 731 (1239)
Q Consensus 726 iL~~~~ 731 (1239)
.--|.|
T Consensus 509 ~~~~~~ 514 (516)
T KOG1033|consen 509 VALHEF 514 (516)
T ss_pred Hhhhhh
Confidence 655554
No 436
>PLN02837 threonine-tRNA ligase
Probab=99.91 E-value=4.8e-23 Score=255.87 Aligned_cols=353 Identities=15% Similarity=0.145 Sum_probs=246.2
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce------eccCCCccccccEEEEeccCCCeeeecCCCcHHH
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 856 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~i 856 (1239)
...|+..|+|..+.+++.+++.+++...++||++|.||.+ ...++++...++||++.|..++.++||| +++|.
T Consensus 235 ~g~G~~~~~p~G~~l~~~L~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sGh~~~~~~~mf~~~~~~~~~y~l~p-~~~p~ 313 (614)
T PLN02837 235 AGGGLVFWHPKGAIVRHIIEDSWKKMHFEHGYDLLYTPHVAKADLWKTSGHLDFYKENMYDQMDIEDELYQLRP-MNCPY 313 (614)
T ss_pred cCCcceEEechHHHHHHHHHHHHHHHHHHCCCEEEECCccCCHHHHhhcCCcccchhhcccccCCCCceEEECC-CCcHH
Confidence 4578999999999999999999999999999999999999 3345577889999999998889999999 55555
Q ss_pred -HHHHHh----CCCCceeEEeecCeEEcCCCC-----CCCCceeEEeEEEeCCCCcccH--HHHHHHHHHHHHhcCCCCc
Q 000880 857 -IRWAIS----NQKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 857 -aR~~~~----~~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~s~~aD--aEvi~la~~~l~~lgi~~~ 924 (1239)
+-++.. ++..|+|++++|+|||+|..+ -|.++|+|.+.++|...+...+ .+++.++.++++.||+..
T Consensus 314 ~~~~~~~~~~SyrdLPlr~~~~~~~~R~E~~g~~~GL~RvreF~~~e~h~f~~~~q~~~e~~~~l~~~~~~~~~lg~~~- 392 (614)
T PLN02837 314 HILVYKRKLHSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILKQFGFSK- 392 (614)
T ss_pred HHHHHhCccCChhHCCHhhEeecccccCCCCCCCcCcccccceEECeEEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 444443 234699999999999998743 2556799999999988765222 277899999999999975
Q ss_pred eEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Q 000880 925 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 1004 (1239)
Q Consensus 925 ~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~ 1004 (1239)
+.+.++.+. -+.+|-++.|.+.-+.+-.. ++..++.-.....-.+
T Consensus 393 ~~~~~~t~~-----~~~~g~~~~w~~~~~~l~~~----------------------l~~~~~~~~~~~g~~a-------- 437 (614)
T PLN02837 393 YEINLSTRP-----EKSVGSDDIWEKATTALRDA----------------------LDDKGWEYKVDEGGGA-------- 437 (614)
T ss_pred EEEEecCCc-----hhccCCHHHHHHHHHHHHHH----------------------HHHcCCCceeCCCccc--------
Confidence 788888753 24456555553332221111 1111110000000000
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCccccccccccccccccc
Q 000880 1005 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1084 (1239)
Q Consensus 1005 ~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD 1084 (1239)
.+| .++.+-+...-|-.+-.|++--.|. -+-|||
T Consensus 438 ----------------------------fyg--pkid~~~~d~~gr~~q~~tiqldf~----------------~~~~f~ 471 (614)
T PLN02837 438 ----------------------------FYG--PKIDLKIEDALGRKWQCSTIQVDFN----------------LPERFD 471 (614)
T ss_pred ----------------------------ccC--cceeeEeeccCCceeeecceeEeec----------------chhhcC
Confidence 011 1232222222244444555421111 122333
Q ss_pred chhhhccccccccccCCCCCCc-eeeeec--cHHHHHhhCCC---CCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHH
Q 000880 1085 YLLHRMWDREYVGYASRTNPPS-GVGASL--ALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1158 (1239)
Q Consensus 1085 ~L~~~fg~~~~~~~~g~~~~~p-AvGfai--gldrl~~~L~~---~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr 1158 (1239)
| .| ...-|... .| -+.-++ ++||++.+|.+ +..|.+. +|.+|+|++.+ +....+|.++++.||
T Consensus 472 -l--~y-----~~~d~~~~-~pv~ih~~~~G~~eRlia~Lie~~~g~~P~~l-aP~qV~IIpi~-~~~~~~A~~Ia~~Lr 540 (614)
T PLN02837 472 -I--TY-----VDSNSEKK-RPIMIHRAILGSLERFFGVLIEHYAGDFPLWL-APVQARVLPVT-DNELEYCKEVVAKLK 540 (614)
T ss_pred -c--EE-----ECCCCCcc-CCEEEEcCCccCHHHHHHHHHHHcCCCCCCCC-CCccEEEEEeC-hHHHHHHHHHHHHHH
Confidence 1 01 11112111 22 222233 69999987752 5555544 68899999985 667899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHhh
Q 000880 1159 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1231 (1239)
Q Consensus 1159 ~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~~ 1231 (1239)
+.|++|++ .. +.++++++++|++.|+|++|+||++|.++|+|+||++.++++..++++++++.|.+.+++.
T Consensus 541 ~~GirVev-~~-~~slgkkir~A~~~gip~~IiIG~~E~e~~~VtVr~r~~geq~~v~~~el~~~l~~~~~~~ 611 (614)
T PLN02837 541 AKGIRAEV-CH-GERLPKLIRNAETQKIPLMAVVGPKEVETRTLTVRSRHGGELGTMPVDDFINRIQLAVENR 611 (614)
T ss_pred HCCCEEEE-eC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCEEEEEECCCCceeEeeHHHHHHHHHHHHhhc
Confidence 99999998 45 5799999999999999999999999999999999999999999999999999998877643
No 437
>PRK03991 threonyl-tRNA synthetase; Validated
Probab=99.89 E-value=1.3e-21 Score=240.75 Aligned_cols=347 Identities=13% Similarity=0.117 Sum_probs=236.3
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce------eccCCCccccccEEEEeccCCCeeeecCCCcHHHH
Q 000880 784 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 857 (1239)
Q Consensus 784 ~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~ia 857 (1239)
..|..-|+|..+.+++.|.+.+++.+.++||++|.||.+ ...++.+....+||.+. .+++.++|||.-+.+.+
T Consensus 216 ~~G~~~~~P~G~~i~~~L~~~~~~~~~~~G~~~V~tP~~~~~~~~~~sgh~~~f~e~my~v~-~~~e~l~Lrp~~c~~~~ 294 (613)
T PRK03991 216 DVGHMRYYPKGRLIRDLLEDYVYNLVVELGAMPVETPIMYDLSHPAIREHADKFGERQYRVK-SDKKDLMLRFAACFGQF 294 (613)
T ss_pred CeeeEEEEcHHHHHHHHHHHHHHHHHHHCCCEEEECCeecChhHHhhcccccccchhceEec-CCCceEEEecCCCHHHH
Confidence 467888999999999999999999999999999999998 33345667788999984 44689999997777766
Q ss_pred HHHHh----CCCCceeEEeecC-eEEcCCCCC-----CCCceeEEeEEEeCCCCcccHH---HHHHHHHHHHHhcCCCCc
Q 000880 858 RWAIS----NQKSSFKRYEISS-VYRRAIGHS-----PPNRYLQGDFDIIGGASALTEA---EVLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 858 R~~~~----~~~~P~r~~Y~g~-VfR~e~~~~-----~~~ef~Q~GvEiiG~~s~~aDa---Evi~la~~~l~~lgi~~~ 924 (1239)
-+... ++..|+|+|.+|+ +||+|.++. |.++|+|.++++|+.+...+.. +++.++.++++.||+.
T Consensus 295 ~~~~~~~~SyrdLPlr~~e~~~~~fR~E~~g~l~GL~RvReF~~~D~h~f~~~~eqa~~e~~~~l~~~~~i~~~lGl~-- 372 (613)
T PRK03991 295 LMLKDMTISYKNLPLKMYELSTYSFRLEQRGELVGLKRLRAFTMPDMHTLCKDMEQAMEEFEKQYEMILETGEDLGRD-- 372 (613)
T ss_pred HHHhCCcCchhhCChhhheecchheeCCCCCCCcCcccccceEeeeEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCC--
Confidence 55443 3346999999999 999987542 4557999999999985222222 7789999999999995
Q ss_pred eEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Q 000880 925 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 1004 (1239)
Q Consensus 925 ~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~ 1004 (1239)
+.+.++... .+. +-. ...|..++.... ++- ++....|.
T Consensus 373 ~~~~~~~t~---df~---~~~---~~~l~~~l~~~g-------------------------~~~--------~~~~~~g~ 410 (613)
T PRK03991 373 YEVAIRFTE---DFY---EEN---KDWIVELVKREG-------------------------KPV--------LLEILPER 410 (613)
T ss_pred eEEEecCHH---HHh---hhH---HHHHHHHHHHcC-------------------------CCE--------EecccCCc
Confidence 787776531 111 100 111211222111 000 00000000
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCccccccccccccccccc
Q 000880 1005 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1084 (1239)
Q Consensus 1005 ~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD 1084 (1239)
. .-+| .++.+.....-|-..-.|+ +=-|+.|
T Consensus 411 ~--------------------------~~yg--~kie~~~~d~~gr~~q~~T--------------------~qld~~~- 441 (613)
T PRK03991 411 K--------------------------HYWV--LKVEFAFIDSLGRPIENPT--------------------VQIDVEN- 441 (613)
T ss_pred c--------------------------ccCc--CcEEEEEeCCCCCEEEEee--------------------eecCccc-
Confidence 0 0001 1233222211111122221 1122333
Q ss_pred chhhhccccccccccCCCCCCc-eeeee-cc-HHHHHhhCC---CCC--------cCCCCCCCceEEEEecCCCccHHHH
Q 000880 1085 YLLHRMWDREYVGYASRTNPPS-GVGAS-LA-LETIIQHYP---VDF--------KPVRNEAGTSVLVCSRGGGGLLVER 1150 (1239)
Q Consensus 1085 ~L~~~fg~~~~~~~~g~~~~~p-AvGfa-ig-ldrl~~~L~---~~~--------~~~~~~~~~~v~v~~~~~~~~~~~a 1150 (1239)
.++|+-. +...-|... .| -+|.+ +| ++|++.+|- .+. .|.+ -+|.+|+|++.+ +.....|
T Consensus 442 --~~~f~l~-y~d~~g~~~-~Pviih~~~~GsieR~i~aliE~~~~~~~~g~gl~~P~~-lAP~qV~IIpi~-e~~~~~A 515 (613)
T PRK03991 442 --AERFGIK-YVDENGEEK-YPIILHCSPTGSIERVIYALLEKAAKEEEEGKVPMLPTW-LSPTQVRVIPVS-ERHLDYA 515 (613)
T ss_pred --chhCCCE-EECCCCCEe-eCEEEEECCEeHHHHHHHHHHHHhCCccccCceeEcCcc-ccCceEEEEEeC-HHHHHHH
Confidence 2344321 011112221 34 44654 65 999987773 121 3433 468899999995 7788999
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHh
Q 000880 1151 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1230 (1239)
Q Consensus 1151 ~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~ 1230 (1239)
.++++.||+.|++|+++.. +.++++++++|++.|+|++|+||++|+++|+|+||++.++++..++++++++.+++.+++
T Consensus 516 ~eIa~~Lr~~GirV~lDdr-~~slgkKir~A~~~GiP~iIVIG~kEle~g~VtVr~R~t~eq~~v~l~eli~~l~~~~~~ 594 (613)
T PRK03991 516 EEVADKLEAAGIRVDVDDR-DESLGKKIRDAGKEWIPYVVVIGDKEMESGKLTVTIREESEKVEMTLEELIERIKEETKG 594 (613)
T ss_pred HHHHHHHHhCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHhc
Confidence 9999999999999998776 679999999999999999999999999999999999999999999999999999988864
Q ss_pred h
Q 000880 1231 Q 1231 (1239)
Q Consensus 1231 ~ 1231 (1239)
.
T Consensus 595 ~ 595 (613)
T PRK03991 595 Y 595 (613)
T ss_pred C
Confidence 3
No 438
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=3.5e-23 Score=218.28 Aligned_cols=157 Identities=25% Similarity=0.366 Sum_probs=121.3
Q ss_pred CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCC
Q 000880 547 RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 625 (1239)
Q Consensus 547 gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~ 625 (1239)
|+|.+++... ..+++.+++.++.||+.||+|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 6789999864 45999999999999999999999999 999999999999999 999876421
Q ss_pred CCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhc-CCC-C---Cc
Q 000880 626 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GEL-P---PS 697 (1239)
Q Consensus 626 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~-~~~-p---~~ 697 (1239)
....||+.|||||++.+ ..|+.++|||||||++|||++ ||............+... ... + +.
T Consensus 62 ---------~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (176)
T smart00750 62 ---------EQSRVDPYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSN 131 (176)
T ss_pred ---------ccCCCcccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccccc
Confidence 11268999999999988 568999999999999999997 775443322222222111 111 1 11
Q ss_pred cccCCH--HHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 000880 698 WVAKFS--EQESLLRRLMSPSPSDRPSATELLQDALP 732 (1239)
Q Consensus 698 ~~~~~~--e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 732 (1239)
...... ++.++|.+||..||.+||++.++++|+|.
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 111222 58999999999999999999999999754
No 439
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=2.2e-22 Score=233.98 Aligned_cols=174 Identities=20% Similarity=0.126 Sum_probs=129.6
Q ss_pred cccCCceEEeeeccCCceEEEEEEEcc-CCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeecC
Q 000880 421 RYLNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 496 (1239)
Q Consensus 421 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~ 496 (1239)
...++|.+.+.||+|+||+||+|+++. +++.||||++..... .......+.+|+.+|+.++|+||++.+..+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 346789999999999999999999886 678889998753211 222345689999999999999998643211
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL 575 (1239)
...|+|||||+| +|. .+.. .. ...++.|++.||
T Consensus 91 ---------------------------------------~~~~LVmE~~~G~~L~-~~~~---~~---~~~~~~~i~~aL 124 (365)
T PRK09188 91 ---------------------------------------GKDGLVRGWTEGVPLH-LARP---HG---DPAWFRSAHRAL 124 (365)
T ss_pred ---------------------------------------CCcEEEEEccCCCCHH-HhCc---cc---hHHHHHHHHHHH
Confidence 125899999975 675 2211 11 146789999999
Q ss_pred HHHHhCCccccCC-CcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 000880 576 AHIHGQGIIHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 651 (1239)
Q Consensus 576 ~yLHs~gIiHrDL-Kp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 651 (1239)
.|||++||+|||| ||+|||++.++.+||+|||+|+.+.......... ...+-++.++++.|+|||.+..
T Consensus 125 ~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~-------~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 125 RDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIA-------AYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred HHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhh-------hhhhhhhhhccCccCCcccCCh
Confidence 9999999999999 9999999999999999999999764321110000 0011246689999999998865
No 440
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=7.2e-22 Score=214.26 Aligned_cols=202 Identities=22% Similarity=0.347 Sum_probs=168.8
Q ss_pred CCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCccccCC
Q 000880 424 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 424 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
-.|++.++||+|+||+.+.|++..+++.||||.-+.+.. ..++..|....+.| ..+.|..+|.+-
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~----APQLrdEYr~YKlL~g~~GIP~vYYFG---------- 93 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE----APQLRDEYRTYKLLGGTEGIPQVYYFG---------- 93 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC----cchHHHHHHHHHHHcCCCCCCceeeec----------
Confidence 479999999999999999999999999999997654433 34677888888888 468888776221
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 581 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~~~~~~~i~~qI~~gL~yLHs~ 581 (1239)
++..+-.+|||+++.||.+++.-+ .+|+...+..++.|++.-++|+|++
T Consensus 94 ------------------------------qeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k 143 (449)
T KOG1165|consen 94 ------------------------------QEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK 143 (449)
T ss_pred ------------------------------cccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc
Confidence 234566799999999999999854 5699999999999999999999999
Q ss_pred CccccCCCcccEEEcCCC-----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 000880 582 GIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 656 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 656 (1239)
.+|+|||||+|+||...+ .|.|+|||+|+.+..+...+...+ ..+.+..||..||+--...| ..-+
T Consensus 144 ~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPY--------rE~KSLsGTARYMSINTHlG-rEQS 214 (449)
T KOG1165|consen 144 DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPY--------REHKSLSGTARYMSINTHLG-REQS 214 (449)
T ss_pred ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcc--------ccccccccceeeeEeecccc-chhh
Confidence 999999999999997644 489999999999887766554443 34678899999999999888 5689
Q ss_pred cchhhHHHHHHHHHhhc---CCchh
Q 000880 657 EKADMYSLGIVFFELWH---PFSTA 678 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~ 678 (1239)
...|+-|||.+++.++. ||.+.
T Consensus 215 RRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 215 RRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred hhhhHHHhhhhhhhhccCCCccccc
Confidence 99999999999988884 77654
No 441
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=4.3e-20 Score=209.79 Aligned_cols=253 Identities=30% Similarity=0.501 Sum_probs=193.4
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCch-hHHHHHHHHHHHHhcCCC-ceeeeeeeeeecCccccCCC
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~L~Hp-nIv~l~~~~~e~~~~~~~~~ 503 (1239)
|.+.+.||.|+||.||++.+. ..+|+|.+........ ....+.+|+.+++.+.|+ +|+++++.+..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--------- 69 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD--------- 69 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec---------
Confidence 678899999999999999997 8899999976554433 567899999999999988 79999987722
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
....+++++|+. +++.+++.... .+....+..++.|++.++.|+|
T Consensus 70 -------------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H 118 (384)
T COG0515 70 -------------------------------EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118 (384)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 223799999997 47777776654 7999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCC
Q 000880 580 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKID 656 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~ 656 (1239)
+.+++||||||+||+++..+ .++++|||+++........... .......+||+.|+|||.+.+. ..+.
T Consensus 119 ~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~---------~~~~~~~~~t~~~~~pe~~~~~~~~~~~ 189 (384)
T COG0515 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSI---------PALPSTSVGTPGYMAPEVLLGLSLAYAS 189 (384)
T ss_pred hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccc---------cccccccccccccCCHHHhcCCCCCCCC
Confidence 99999999999999999988 7999999999854322111000 0123567899999999999874 4688
Q ss_pred cchhhHHHHHHHHHhhc---CCchhHH---HHHHHHhhhhcC-C-CCCccccC-----CHHHHHHHHHccCCCCCCCCCH
Q 000880 657 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKG-E-LPPSWVAK-----FSEQESLLRRLMSPSPSDRPSA 723 (1239)
Q Consensus 657 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~~~~~~-~-~p~~~~~~-----~~e~~~LI~~~L~~dP~~RPta 723 (1239)
...|+||+|++++++++ ||..... .......+.... . ........ ...+.+++.+|+..+|..|.+.
T Consensus 190 ~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 269 (384)
T COG0515 190 SSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSS 269 (384)
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCH
Confidence 99999999999999885 6554442 222222222111 1 11111111 1367899999999999999999
Q ss_pred HHHHhcc
Q 000880 724 TELLQDA 730 (1239)
Q Consensus 724 ~eiL~~~ 730 (1239)
.....++
T Consensus 270 ~~~~~~~ 276 (384)
T COG0515 270 SSDLSHD 276 (384)
T ss_pred HHHhhch
Confidence 9888773
No 442
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=1.2e-20 Score=196.79 Aligned_cols=256 Identities=21% Similarity=0.250 Sum_probs=189.9
Q ss_pred CCCcccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC-CceeeeeeeeeecC
Q 000880 418 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFETG 496 (1239)
Q Consensus 418 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H-pnIv~l~~~~~e~~ 496 (1239)
+.-...+.|.++++||.|+||.+|.|.+..+|..||||+-+.+.. ..++..|..+.+.|+| ..|..+..+.
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~---- 80 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYG---- 80 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhc----
Confidence 344456889999999999999999999999999999998653322 2357889999999976 4555554332
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~~~~~~~i~~qI~~gL 575 (1239)
.+..+-.+||++.+.||.+++.- ...|+..+++.++-|++.-+
T Consensus 81 ------------------------------------~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~Ri 124 (341)
T KOG1163|consen 81 ------------------------------------TEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRI 124 (341)
T ss_pred ------------------------------------cccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHH
Confidence 23456689999999999999974 45699999999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 652 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 652 (1239)
+|+|.+++|||||||+|+|..-+ ..+.|+|||+|+.+..........+ ...+...||..|++--++.+
T Consensus 125 EyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpy--------re~r~ltGTaRYASinAh~g- 195 (341)
T KOG1163|consen 125 EYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPY--------REDRNLTGTARYASINAHLG- 195 (341)
T ss_pred HHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCcc--------ccCCccceeeeehhhhhhhh-
Confidence 99999999999999999999755 3488999999998765443332222 23456789999999988877
Q ss_pred CCCCcchhhHHHHHHHHHhhc---CCchhHHH---HHHHHhhhhcCCCCC--ccccCCHHHHHHHHHccCCCCCCCCCHH
Q 000880 653 PKIDEKADMYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSAT 724 (1239)
Q Consensus 653 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~---~~~~~~~~~~~~~p~--~~~~~~~e~~~LI~~~L~~dP~~RPta~ 724 (1239)
-.-+...|+-|+|.+|..+.. ||.+.... +...++...+-..|. .+.+.+.++.-.+.-|-..-=++-|...
T Consensus 196 ~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 196 IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 456889999999988877753 88765432 222333333333332 3344555777788777666666666654
Q ss_pred HH
Q 000880 725 EL 726 (1239)
Q Consensus 725 ei 726 (1239)
-+
T Consensus 276 yl 277 (341)
T KOG1163|consen 276 YL 277 (341)
T ss_pred HH
Confidence 43
No 443
>COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.85 E-value=1.5e-20 Score=226.26 Aligned_cols=354 Identities=15% Similarity=0.169 Sum_probs=253.4
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce------eccCCCccccccEEEEeccCCCeeeecCCCcHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 855 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~ 855 (1239)
....|+..|+|..+.+++.+++.++.....+||++|.||.+ ..+++++.+.+.||.+... ++.++|||--++.
T Consensus 207 ~~~~G~~~~~pkG~~ir~~le~y~~~~~~~~Gy~~V~TP~~~~~~l~~~SGH~~~y~e~mf~~~~~-~~~~~lKpmNCpg 285 (589)
T COG0441 207 EEGPGLPFWHPKGATIRNLLEDYVRTKLRSYGYQEVKTPVLADLELWELSGHWDNYKEDMFLTESD-DREYALKPMNCPG 285 (589)
T ss_pred ccCCcceEECCCcccHHHHHHHHHHHHHHhcCceEecCCeeeecccchhccchhhccccceeeccC-ChhheeeeccCHh
Confidence 46789999999999999999999999999999999999999 3445567789999987654 4999999955544
Q ss_pred HHHHHHh----CCCCceeEEeecCeEEcCCCC---C--CCCceeEEeEEEeCCCCcccHH--HHHHHHHHHHHhcCCCCc
Q 000880 856 FIRWAIS----NQKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEA--EVLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 856 iaR~~~~----~~~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~s~~aDa--Evi~la~~~l~~lgi~~~ 924 (1239)
-+..+.+ ++..|+|++..|.|||+|..+ + +.|.|+|-+++||+..++..|. +++.++..+++.+|+++
T Consensus 286 h~~ifk~~~~SYR~LP~r~~E~g~v~R~E~SGal~GL~RvR~ftqdDaHifc~~dQi~~E~~~~~~~i~~v~~~fg~~~- 364 (589)
T COG0441 286 HILIFKSGLRSYRELPLRLAEFGYVYRYEKSGALHGLMRVRGFTQDDAHIFCTPDQIKDEFKGILELILEVYKDFGFTD- 364 (589)
T ss_pred HHHHHhcCCcceeccchhhhhcceeecccCcchhhccccccceeecccceeccHHHHHHHHHHHHHHHHHHHHhcCCce-
Confidence 4455544 334699999999999999876 2 4556999999999997775444 88999999999999985
Q ss_pred eEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Q 000880 925 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 1004 (1239)
Q Consensus 925 ~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~ 1004 (1239)
+.+.++.+. +.+|..+.|-.+...+...++. .++.-.....-. .+.|+
T Consensus 365 y~~~ls~r~------k~ig~d~~W~~a~~~l~~al~~----------------------~~~~~~~~~G~~----aFyGP 412 (589)
T COG0441 365 YEVKLSTRP------KFIGSDEMWDKAEAALREALKE----------------------IGVEYVEEPGEG----AFYGP 412 (589)
T ss_pred EEEEEecCC------cccCChhhhHHHHHHHHHHHHh----------------------hCceeeecCCce----EEECc
Confidence 999999976 4556666654433222222111 110000000000 11122
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCccccccccccccccccc
Q 000880 1005 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1084 (1239)
Q Consensus 1005 ~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD 1084 (1239)
++.|-+...-|-..-.|+|.--|.. .-|+|
T Consensus 413 ----------------------------------Kid~~v~Dalgr~~q~~TIQlDf~l----------------peRF~ 442 (589)
T COG0441 413 ----------------------------------KIDFQVKDALGREWQLGTIQLDFNL----------------PERFD 442 (589)
T ss_pred ----------------------------------ccceEEEeccCcceecceEEEecCC----------------hhhce
Confidence 2222222222333334554333211 12222
Q ss_pred chhhhccccccccc-cCCCCCCceeeeecc--HHHHHhhCC---CCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHH
Q 000880 1085 YLLHRMWDREYVGY-ASRTNPPSGVGASLA--LETIIQHYP---VDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1158 (1239)
Q Consensus 1085 ~L~~~fg~~~~~~~-~g~~~~~pAvGfaig--ldrl~~~L~---~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr 1158 (1239)
-.. ++. .+..+++ .+.-|+. ++|.+.+|. .+.+|.|. +|.+|.|++.+ ++...+|.++++.|+
T Consensus 443 -------l~Y-v~~d~~~~~Pv-miHrai~GSiERfi~iLiE~~~G~~P~WL-aPvQv~VipV~-~~~~~ya~~v~~~L~ 511 (589)
T COG0441 443 -------LEY-VDEDGEKKRPV-IIHRAILGSIERFIGILLEHYAGALPTWL-APVQVRVIPVA-DEHLDYAKEVAEKLR 511 (589)
T ss_pred -------EEE-EcCCCCccCCE-EEEeccchhHHHHHHHHHHhccCCCcccC-CccEEEEEEeC-hHHHHHHHHHHHHHH
Confidence 100 111 1112222 4445554 899987774 56677776 68999999996 677899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHhh
Q 000880 1159 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1231 (1239)
Q Consensus 1159 ~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~~ 1231 (1239)
+.|++|+++.. +.++.+.++.|....+|+++++|++|.++++|++|...++++..++++++++.|+..+++.
T Consensus 512 ~~giRvdvD~~-~e~l~kKIR~a~~~kipyiiVvG~kE~e~~~v~vR~r~~~~~~~~~l~e~i~~ik~e~~~~ 583 (589)
T COG0441 512 KAGIRVDIDDR-NEKLGKKIREAGTQKIPYVIVVGDKEVETGTVVVRRRGGKQQKSMTLEELVEELKKEIEGR 583 (589)
T ss_pred HcCCeeeeccc-ccchHHHHHHHHhcCCCEEEEEchhhhccCceEEEEccCCccccccHHHHHHHHHHHhhcc
Confidence 99999998887 6799999999999999999999999999999999999999999999999999998888654
No 444
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=2.9e-22 Score=247.44 Aligned_cols=260 Identities=24% Similarity=0.353 Sum_probs=191.2
Q ss_pred EEeeeccCCceEEEEEEEccCCcEEEEEEEecC---CCCch-hHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 428 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 428 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~---~~~~~-~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
....+|.|++|.|+.+......+.++.|..+.+ ..+.. ....+..|+.+-..|.|||++..+..+.+
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~--------- 392 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQE--------- 392 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhh---------
Confidence 457899999999988888877777777765532 11212 22236778888888999999776544322
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....+-.||||+++|..++.....++...+..++.|++.|+.|||++||
T Consensus 393 -------------------------------~~~~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Gi 441 (601)
T KOG0590|consen 393 -------------------------------IDGILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGL 441 (601)
T ss_pred -------------------------------cccchhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCc
Confidence 1112223999988999999888889999999999999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHH
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 663 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 663 (1239)
.||||||+|+++..+|.+||+|||.+.....+. ........+.+|+..|+|||++.+...-...+||||
T Consensus 442 ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~-----------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS 510 (601)
T KOG0590|consen 442 AHRDLKLENLLVTENGILKIIDFGAASVFRYPW-----------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWS 510 (601)
T ss_pred eeccCccccEEEecCCceEEeecCcceeeccCc-----------chhhhhhcCcccCCcCcCcccccccccCcchhhhhh
Confidence 999999999999999999999999998653221 111233466799999999999998543446799999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHhhhhc--CCC----CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 000880 664 LGIVFFELWH---PFSTAMERQIVLSDLKQK--GEL----PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 734 (1239)
Q Consensus 664 lGviL~ELlt---Pf~~~~~~~~~~~~~~~~--~~~----p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 734 (1239)
.||++..|.+ ||................ ... -..+...+.+.+.+|.+||+.||.+|.|+++|++++|++.
T Consensus 511 ~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 511 CGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred ccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 9999999986 554332221110000000 000 1122333446789999999999999999999999999998
Q ss_pred chHH
Q 000880 735 MEYE 738 (1239)
Q Consensus 735 ~~~~ 738 (1239)
...+
T Consensus 591 i~~c 594 (601)
T KOG0590|consen 591 IECC 594 (601)
T ss_pred cceE
Confidence 7644
No 445
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=3.7e-20 Score=215.14 Aligned_cols=256 Identities=22% Similarity=0.279 Sum_probs=184.1
Q ss_pred CceEEeeeccCCceEEEEEEEccCC-cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC----CceeeeeeeeeecCccc
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDKSLPVNDRILREVATLSRLQH----QHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H----pnIv~l~~~~~e~~~~~ 499 (1239)
.|.+.++||+|+||.||+|.+..++ ..+|+|.......... . .+..|+.++..+.+ +++..+++...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~------ 90 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-S-VLKIEIQVLKKLEKKNGPSHFPKLLDHGR------ 90 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-c-cchhHHHHHHHHhhhcCCCCCCEEEEecc------
Confidence 7999999999999999999998664 6889998765432211 1 57788999998873 46777665431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....+-||||+.++.+|.++.... +.++...+..++.|++.+|++
T Consensus 91 ---------------------------------~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~ 137 (322)
T KOG1164|consen 91 ---------------------------------STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALED 137 (322)
T ss_pred ---------------------------------CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHH
Confidence 124577999999999999988644 579999999999999999999
Q ss_pred HHhCCccccCCCcccEEEcCC-----CCEEEeecCcchhccccccccCCCCCCCCCCcccc-CcccccCccCCCcccccC
Q 000880 578 IHGQGIIHRDLTPNNIFFDAR-----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIEQG 651 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~-----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~l~~ 651 (1239)
||+.|++||||||.|+++... ..+.|.|||+|+............ ..... .....||..|+++.+..+
T Consensus 138 lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~------~~~r~~~~~~rGT~ry~S~~~H~~ 211 (322)
T KOG1164|consen 138 LHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNL------RPPRPQKGLFRGTLRYASINVHLG 211 (322)
T ss_pred HHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCccc------ccCCCCccCCCCccccccHHHhCC
Confidence 999999999999999999865 469999999999432111110000 00011 134569999999999998
Q ss_pred CCCCCcchhhHHHHHHHHHhhc---CCchhHHH---HHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 000880 652 WPKIDEKADMYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 725 (1239)
Q Consensus 652 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~---~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 725 (1239)
...+++.|+||++.++.||+. ||...... ........ ...........+.++..+...+-..+...+|....
T Consensus 212 -~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~ 289 (322)
T KOG1164|consen 212 -IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR-KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEK 289 (322)
T ss_pred -CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh-hhccccccCCChHHHHHHHHHhhccCCcCCCCHHH
Confidence 578999999999999999985 77543321 11111111 11111112223346677777777789999998888
Q ss_pred HHhc
Q 000880 726 LLQD 729 (1239)
Q Consensus 726 iL~~ 729 (1239)
+...
T Consensus 290 ~~~~ 293 (322)
T KOG1164|consen 290 LAEL 293 (322)
T ss_pred HHHH
Confidence 7653
No 446
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=2.1e-22 Score=236.56 Aligned_cols=241 Identities=28% Similarity=0.411 Sum_probs=195.9
Q ss_pred eeccCCceEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccCCCCcC
Q 000880 431 PLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMW 506 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~~~~~~ 506 (1239)
++|.|+||.|++++.. ..|..||+|+.+..............|..++..++ ||.+|+++.+|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafq------------- 67 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQ------------- 67 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeec-------------
Confidence 4799999999887643 45788999998765433233334556778888886 999999997763
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 000880 507 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 585 (1239)
Q Consensus 507 ~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiH 585 (1239)
....+|++++|.. |.|...+.....+++.....+...++.|++++|+.+|+|
T Consensus 68 ---------------------------t~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiy 120 (612)
T KOG0603|consen 68 ---------------------------TDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAY 120 (612)
T ss_pred ---------------------------cccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 2456789999995 588888888888999999999999999999999999999
Q ss_pred cCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhHHHH
Q 000880 586 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 665 (1239)
Q Consensus 586 rDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 665 (1239)
||+|++||+++.+|++++.|||+++..-.. +..|||..|||||++.+ ...++|+||||
T Consensus 121 rd~k~enilld~~Ghi~~tdfglske~v~~-------------------~~~cgt~eymApEI~~g---h~~a~D~ws~g 178 (612)
T KOG0603|consen 121 RDYKLENVLLLLEGHIKLTDFGLSKEAVKE-------------------KIACGTYEYRAPEIING---HLSAADWWSFG 178 (612)
T ss_pred hcccccceeecccCccccCCchhhhHhHhh-------------------hhcccchhhhhhHhhhc---cCCcccchhhh
Confidence 999999999999999999999999865322 22399999999999985 57899999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCCCchH
Q 000880 666 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 737 (1239)
Q Consensus 666 viL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~~~~~ 737 (1239)
++++||+| ||.. +....++..+...|. ..++.+++++..++..+|..|.. ..++++|+||.+..|
T Consensus 179 vl~felltg~~pf~~----~~~~~Il~~~~~~p~---~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~ 251 (612)
T KOG0603|consen 179 VLAFELLTGTLPFGG----DTMKRILKAELEMPR---ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW 251 (612)
T ss_pred hhHHHHhhCCCCCch----HHHHHHhhhccCCch---hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence 99999997 8877 344444444555554 34568999999999999999975 578999999999987
Q ss_pred HHH
Q 000880 738 ELL 740 (1239)
Q Consensus 738 ~~~ 740 (1239)
.-+
T Consensus 252 ~~l 254 (612)
T KOG0603|consen 252 NEL 254 (612)
T ss_pred hhH
Confidence 744
No 447
>KOG4018 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown]
Probab=99.84 E-value=1.3e-21 Score=200.80 Aligned_cols=119 Identities=29% Similarity=0.422 Sum_probs=106.7
Q ss_pred CCCCHHHHHHHHHHHhhhcCCce-eeecCCCCeEEEEEcCCCCCCCCCCCcE-EEEEEEEcCCCCCCCCCccccccCCCC
Q 000880 27 TVDDNELLSEEITALCAIFQEDC-KVVSGSPPQILVKLRPYSKDMGYEDLDV-SALLLVRCLPGYPYKCPKLQITPEKGL 104 (1239)
Q Consensus 27 ~~~~~eeq~~ElEaL~sIy~d~~-~~~~~~~~~~~i~i~~~~~~~~~~~~~~-~~~L~v~~p~~YP~~~P~~~~~~~~~l 104 (1239)
|+.+ |+|++|+|||+|||||+| +|.+..|+.|+|.|.... ++.+.+. ++.|.|+||++||+++|.+.+....++
T Consensus 1 Ms~~-EeQe~E~EaLeSIY~de~~~i~~~~~~~f~v~iq~e~---~e~d~~~~~~~l~~s~tEnYPDe~Pli~~~~~~~~ 76 (215)
T KOG4018|consen 1 MSQY-EEQEEELEALESIYPDEFKHINSEDPPIFEVTIQYEE---GENDEPKGSFILVFSLTENYPDEAPLIEAFENENL 76 (215)
T ss_pred CCcH-HHHHHHHHHHHHhccchhhhhhccCCccceeeeeccc---ccCCCccccEEEEEEccCCCCCCCcceeccccccc
Confidence 5545 999999999999999999 777778888999998776 4444444 899999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCceeeehHHHHHHHHHHhhccCCCC
Q 000880 105 TKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLGQS 151 (1239)
Q Consensus 105 ~~~~~~~l~~~L~e~~~e~~~~G~~mif~lv~~lke~L~~~~~~~~~ 151 (1239)
.+.++..|+..|+..+++|| ||+|||+||+.+||||++++.++..
T Consensus 77 ~~~~i~~i~~~l~~~aeenL--GmaMiftLvss~ke~l~e~~~q~~~ 121 (215)
T KOG4018|consen 77 EDAEIEGILEKLQQEAEENL--GMAMIFTLVSSAKEELNEIVEQQKA 121 (215)
T ss_pred cHHHHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 9999999999999999999876664
No 448
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.83 E-value=6.3e-21 Score=233.11 Aligned_cols=237 Identities=24% Similarity=0.379 Sum_probs=175.3
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
-.+|+.++.|-.|+||.||+++|+.+.+.+|+| |+.... ++|- +|.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee----------------
Confidence 478999999999999999999999999999995 432211 1111 12222222222
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
|+-..++...++++... +.+++|||+.|
T Consensus 136 --------------------------------------------gDc~tllk~~g~lPvdm--------vla~Eylh~yg 163 (1205)
T KOG0606|consen 136 --------------------------------------------GDCATLLKNIGPLPVDM--------VLAVEYLHSYG 163 (1205)
T ss_pred --------------------------------------------chhhhhcccCCCCcchh--------hHHhHhhccCC
Confidence 22233344334444332 78999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcchhhH
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 662 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 662 (1239)
|+|||+||+|.+|+.-|++|++|||+++............-.-.....-+.....||||.|.|||++.. ..|+..+|||
T Consensus 164 ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdww 242 (1205)
T KOG0606|consen 164 IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWW 242 (1205)
T ss_pred eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHH
Confidence 999999999999999999999999999864322111000000000111123455699999999999876 5699999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCch
Q 000880 663 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQME 736 (1239)
Q Consensus 663 SlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~ 736 (1239)
++|+|+||++- ||....+.+.+-..+......|..-....++++++|.++|..+|..|. .+.++.+|.||+.+.
T Consensus 243 amGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 243 AMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred HHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 99999999984 999888888777777777777877677788999999999999999996 678899999999998
Q ss_pred HH
Q 000880 737 YE 738 (1239)
Q Consensus 737 ~~ 738 (1239)
|.
T Consensus 323 w~ 324 (1205)
T KOG0606|consen 323 WK 324 (1205)
T ss_pred cc
Confidence 86
No 449
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.83 E-value=4.6e-21 Score=233.81 Aligned_cols=272 Identities=21% Similarity=0.272 Sum_probs=195.5
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCC--CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCC
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 502 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~ 502 (1239)
+|...+.||.+.|=+|.+|++. .| .|+||++-+.. .+.+...+-++|++ .+.++|||.+++.-.-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~---------- 90 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL---------- 90 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH----------
Confidence 6777899999999999999987 34 49999986554 23344455566666 6677999999876331
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 503 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 503 ~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
......|||-+|+-.+|+|.+..+.-+..-+.+.|+.||+.||..+|..|
T Consensus 91 ------------------------------~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g 140 (1431)
T KOG1240|consen 91 ------------------------------VTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG 140 (1431)
T ss_pred ------------------------------HhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22455689999999999999998888888999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCC-CCCccccCcccccCccCCCcccccCC---------
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD-TGGVSVDGTGQVGTYFYTAPEIEQGW--------- 652 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~GT~~Y~APE~l~~~--------- 652 (1239)
|+|+|||.+||||++..++.|+||..-+.... |.+ .+.+.+...+...-.+|.|||.+...
T Consensus 141 VcHGDIKsENILiTSWNW~~LtDFAsFKPtYL---------PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~ 211 (1431)
T KOG1240|consen 141 VCHGDIKSENILITSWNWLYLTDFASFKPTYL---------PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQD 211 (1431)
T ss_pred ccccccccceEEEeeechhhhhcccccCCccC---------CCCCcccceEEEecCCceeeecChHhhhccccccccCCc
Confidence 99999999999999999999999986653221 111 11222111122233479999986531
Q ss_pred -CCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccC--CHHHHHHHHHccCCCCCCCCCHHHH
Q 000880 653 -PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAK--FSEQESLLRRLMSPSPSDRPSATEL 726 (1239)
Q Consensus 653 -~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~--~~e~~~LI~~~L~~dP~~RPta~ei 726 (1239)
+..+++.||||+||++.||++ |......--.+ -......+...... ...+++||..|++.||.+|.+|++.
T Consensus 212 ~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aY---r~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedy 288 (1431)
T KOG1240|consen 212 APLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAY---RSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDY 288 (1431)
T ss_pred ccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhH---hccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHH
Confidence 125789999999999999996 33332221111 11111111100000 1267899999999999999999999
Q ss_pred Hhc---cCCCCchHHHHHHHHHhcCCCC
Q 000880 727 LQD---ALPPQMEYELLDNILRMMHSSE 751 (1239)
Q Consensus 727 L~~---~~~~~~~~~~~~~~~~~~~~~~ 751 (1239)
|+. -+|+...+.++..++..+.+..
T Consensus 289 L~~yrG~~FP~yFy~FL~~Y~~~~~~~~ 316 (1431)
T KOG1240|consen 289 LQKYRGLVFPEYFYSFLYDYLDRFVPLT 316 (1431)
T ss_pred HHhhhccccHHHHHHHHHHHHHhcCCcc
Confidence 987 3778888888888877665443
No 450
>cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain. This domain is the core catalytic domain of tRNA synthetases of the subgroup containing glycyl, histidyl, prolyl, seryl and threonyl tRNA synthetases. It is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. These enzymes belong to class II aminoacyl-tRNA synthetases (aaRS) based upon their structure and the presence of three characteristic sequence motifs in the core domain. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ and the accessory subunit of mitochondrial polymerase gamma (Pol gamma b) . Most class II tRNA synthetases are dimers, with this subgroup consisting of mostly homodimers. These enzymes attach a specific amino acid to the 3' OH group of ribose of the appropriate tRNA.
Probab=99.81 E-value=1.6e-19 Score=200.36 Aligned_cols=137 Identities=9% Similarity=0.129 Sum_probs=119.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCccccccce----eccC--CCccccccEEEEeccC----CCeeeecCCCcHHHHHHHHhC-
Q 000880 795 TELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHG----GDLLELSHELRLPFIRWAISN- 863 (1239)
Q Consensus 795 a~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~~~~~~D~~----G~~l~LRPD~T~~iaR~~~~~- 863 (1239)
+.+++.|++.+++.|.++||++|.||+| ++.. +++...++||+|.|.+ |+.++||||.|+|++|+++++
T Consensus 2 ~~~~~~l~~~~~~~~~~~G~~ei~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LrP~~~~~i~~~~~~~~ 81 (235)
T cd00670 2 TALWRALERFLDDRMAEYGYQEILFPFLAPTVLFFKGGHLDGYRKEMYTFEDKGRELRDTDLVLRPAACEPIYQIFSGEI 81 (235)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEECCeEcCHHHHhhcCCcccchhhcCeeccCcccccCCeEEEecCCCHHHHHHHhccC
Confidence 5678999999999999999999999999 2222 2577789999999998 899999999999999998874
Q ss_pred ---CCCceeEEeecCeEEcCCCC---C-CCCceeEEeEEEeCCC--CcccHHHHHHHHHHHHHhcCCCCceEEEECcHH
Q 000880 864 ---QKSSFKRYEISSVYRRAIGH---S-PPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 933 (1239)
Q Consensus 864 ---~~~P~r~~Y~g~VfR~e~~~---~-~~~ef~Q~GvEiiG~~--s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~ 933 (1239)
...|+|+||+|+|||+|.++ . +.+||+|+|+|+||.+ +..+++|++.++.++++.||+. +.+.+++.+
T Consensus 82 ~~~~~lP~r~~~~g~~fR~E~~~~~gl~R~reF~q~e~~~~~~~~~~~~~~~e~~~~~~~~l~~lgl~--~~i~~~~~~ 158 (235)
T cd00670 82 LSYRALPLRLDQIGPCFRHEPSGRRGLMRVREFRQVEYVVFGEPEEAEEERREWLELAEEIARELGLP--VRVVVADDP 158 (235)
T ss_pred ccchhcCeeeeeecccccCCCCCCCCChhheeeeeceEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEEEccCh
Confidence 24599999999999998766 2 4457999999999998 6789999999999999999983 999999854
No 451
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.4e-19 Score=200.22 Aligned_cols=282 Identities=24% Similarity=0.288 Sum_probs=184.8
Q ss_pred CCcccCCceEEeeeccCCceEEEEEEEccCCc-----------------------------------EEEEEEEec-CC-
Q 000880 419 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGR-----------------------------------HYAVKKIRL-KD- 461 (1239)
Q Consensus 419 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~-----------------------------------~vAVK~i~~-~~- 461 (1239)
++-.+++|++...||+|....||.++...+|. +.|||.+-. ..
T Consensus 152 skFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~ 231 (598)
T KOG4158|consen 152 SKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHD 231 (598)
T ss_pred cccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccC
Confidence 34457899999999999999999998764321 245554421 11
Q ss_pred -CCchhHHHHHHHH------HHH--------Hh--------cCCCceeeeeeeeeecCccccCCCCcCCCCccccccccc
Q 000880 462 -KSLPVNDRILREV------ATL--------SR--------LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSN 518 (1239)
Q Consensus 462 -~~~~~~~~~~~Ev------~iL--------~~--------L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~ 518 (1239)
.+....+.+.+|. ..+ +. -.|||||+++++|.+....--++ ... .
T Consensus 232 s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda-------~~~-----Y 299 (598)
T KOG4158|consen 232 SGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDA-------IER-----Y 299 (598)
T ss_pred CchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCch-------hhh-----C
Confidence 1111223333332 111 11 26999999999997643210000 000 0
Q ss_pred ccccccccccccccccccEEEEEeeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEc--
Q 000880 519 RAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD-- 596 (1239)
Q Consensus 519 ~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~-- 596 (1239)
+.+....+ ......+...+|+||.-.+.+|..++..+. .+.....-++.|+++|+.|||.+||.|||||++||||.
T Consensus 300 Pdalp~R~-~p~g~g~~~tlylvMkrY~~tLr~yl~~~~-~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~Eld 377 (598)
T KOG4158|consen 300 PDALPARW-YPSGAGEPKTLYLVMKRYRQTLREYLWTRH-RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELD 377 (598)
T ss_pred ccccccee-cccccCCCceEEEehhcchhhHHHHHhcCC-CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEec
Confidence 00000001 112234567899999999999999987644 56667778999999999999999999999999999994
Q ss_pred CCC--CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC-----CCcchhhHHHHHHHH
Q 000880 597 ARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-----IDEKADMYSLGIVFF 669 (1239)
Q Consensus 597 ~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-----~~~ksDIwSlGviL~ 669 (1239)
+|+ .+.|+|||.+-.-.... ...|. ....-...|+-.-||||+....+. .-.++|.|+.|.+.|
T Consensus 378 dD~~P~LVvaDFGCcLAd~~hG----lqlpy-----~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaY 448 (598)
T KOG4158|consen 378 DDEIPQLVVADFGCCLADDNHG----LQLPY-----ESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAY 448 (598)
T ss_pred CCCCcEEEEcccceeeeccccc----ccccc-----ccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHH
Confidence 333 47899999875322111 11111 111234568889999999765432 235899999999999
Q ss_pred Hhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 000880 670 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 724 (1239)
Q Consensus 670 ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 724 (1239)
|+++ ||+..-++...... .+..++|+-...+++.+++++..+|+.||++|+++.
T Consensus 449 EIfg~~NPFY~rGem~L~~r~-Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 449 EIFGRSNPFYKRGEMLLDTRT-YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred HHhccCCcccccchheechhh-hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 9996 99874333322222 224556777778889999999999999999999854
No 452
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=1e-19 Score=194.85 Aligned_cols=139 Identities=14% Similarity=0.127 Sum_probs=107.4
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchh------------------------HHHHHHHHHHHHhcCCCce
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV------------------------NDRILREVATLSRLQHQHV 485 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~------------------------~~~~~~Ev~iL~~L~HpnI 485 (1239)
..||+|+||.||+|.+. +|+.||||+++....+... .....+|+..|..+.|+++
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 67999999999999997 8999999999754321111 1123459999999988776
Q ss_pred eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHH
Q 000880 486 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELA 564 (1239)
Q Consensus 486 v~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~ 564 (1239)
....... ....+|||||++| ++.........++...+
T Consensus 82 ~~p~~~~------------------------------------------~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~ 119 (190)
T cd05147 82 PCPEPIL------------------------------------------LKSHVLVMEFIGDDGWAAPRLKDAPLSESKA 119 (190)
T ss_pred CCCcEEE------------------------------------------ecCCEEEEEEeCCCCCcchhhhcCCCCHHHH
Confidence 3322110 0112799999986 44444344567999999
Q ss_pred HHHHHHHHHHHHHH-HhCCccccCCCcccEEEcCCCCEEEeecCcchhc
Q 000880 565 WHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612 (1239)
Q Consensus 565 ~~i~~qI~~gL~yL-Hs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~ 612 (1239)
..++.||+.+|.|+ |+.||+||||||+|||++ ++.++|+|||+|...
T Consensus 120 ~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 120 RELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 99999999999999 799999999999999998 588999999999753
No 453
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=8.1e-19 Score=188.18 Aligned_cols=141 Identities=22% Similarity=0.191 Sum_probs=109.9
Q ss_pred EeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchh------------------------HHHHHHHHHHHHhcCCCc
Q 000880 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV------------------------NDRILREVATLSRLQHQH 484 (1239)
Q Consensus 429 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~------------------------~~~~~~Ev~iL~~L~Hpn 484 (1239)
.+.||+|+||+||+|.+. +|+.||||+++........ ...+.+|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 368999999999999988 9999999999864321100 123457999999999998
Q ss_pred eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCC-HHHHHHhcCCCCHHH
Q 000880 485 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFESYDHFDKEL 563 (1239)
Q Consensus 485 Iv~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gs-L~~~l~~~~~l~~~~ 563 (1239)
|......+. ...|+||||++|. +.........++...
T Consensus 81 i~~p~~~~~------------------------------------------~~~~lVmE~~~g~~~~~~~l~~~~~~~~~ 118 (190)
T cd05145 81 VPVPEPILL------------------------------------------KKNVLVMEFIGDDGSPAPRLKDVPLEEEE 118 (190)
T ss_pred CCCceEEEe------------------------------------------cCCEEEEEEecCCCchhhhhhhccCCHHH
Confidence 743332210 1138999999863 433322345688899
Q ss_pred HHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCCEEEeecCcchhcc
Q 000880 564 AWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 613 (1239)
Q Consensus 564 ~~~i~~qI~~gL~yLHs-~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~ 613 (1239)
+..++.|++.+|.++|+ +||+||||||+|||++ ++.++|+|||+|+...
T Consensus 119 ~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 119 AEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 99999999999999999 9999999999999998 8999999999998653
No 454
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=7.3e-19 Score=190.94 Aligned_cols=179 Identities=13% Similarity=0.150 Sum_probs=130.5
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCch-hHHH------HHHHHHHHHhcCCCceeeeeeeeeec
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDR------ILREVATLSRLQHQHVVRYYQAWFET 495 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~------~~~Ev~iL~~L~HpnIv~l~~~~~e~ 495 (1239)
-++|++++.||.|+||.||++.. ++..+|||+++......+ .... +.+|+..+.++.||+|..+...+...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 36899999999999999999655 477899999975433222 1122 57899999999999999988776432
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 000880 496 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEG 574 (1239)
Q Consensus 496 ~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~g 574 (1239)
... ........+|+|||++| +|.++.. +++ ....+|+.+
T Consensus 108 ~~~--------------------------------~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~ 147 (232)
T PRK10359 108 ERK--------------------------------TLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKAS 147 (232)
T ss_pred ccc--------------------------------cccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHH
Confidence 100 00112457899999987 7877632 333 245699999
Q ss_pred HHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 000880 575 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 654 (1239)
Q Consensus 575 L~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 654 (1239)
|..||+.|++|||+||+||+++.++ ++|+|||.+........ + .-++.. ..
T Consensus 148 l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a--------------------~-------d~~vle-r~ 198 (232)
T PRK10359 148 IESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKA--------------------K-------DRIDLE-RH 198 (232)
T ss_pred HHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhh--------------------H-------HHHHHH-hH
Confidence 9999999999999999999999888 99999998865321100 0 002222 34
Q ss_pred CCcchhhHHHHHHHHHhh
Q 000880 655 IDEKADMYSLGIVFFELW 672 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELl 672 (1239)
|+.++|+||||+++.-+.
T Consensus 199 y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 199 YGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred hcccccccceeEeehHHH
Confidence 678999999999887654
No 455
>cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain.
Probab=99.76 E-value=3.3e-18 Score=195.66 Aligned_cols=149 Identities=13% Similarity=0.113 Sum_probs=128.0
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ecc--CCCccccccEEEEeccCCCeeeecCCCcHHH
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 856 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~i 856 (1239)
.+.|+++++|.++.+++.|++.+++++.++||++|.||+| ++. ++.+...++||++. .+|+.++|||+.|+++
T Consensus 18 ~~~G~~~~~p~g~~l~~~l~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sg~~~~~~~~my~~~-~~~~~l~LRP~~~~~~ 96 (298)
T cd00771 18 AGPGLPFWLPKGAIIRNELEDFLRELQRKRGYQEVETPIIYNKELWETSGHWDHYRENMFPFE-EEDEEYGLKPMNCPGH 96 (298)
T ss_pred CCCcceEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCeecCHHHHhhCCCccccccCceEec-cCCceEEEcccCCHHH
Confidence 5789999999999999999999999999999999999999 332 23455789999994 5678999999999999
Q ss_pred HHHHHhC----CCCceeEEeecCeEEcCCCC-----CCCCceeEEeEEEeCCCCc-ccHH-HHHHHHHHHHHhcCCCCce
Q 000880 857 IRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASA-LTEA-EVLKVTMDIVTRFFHAESC 925 (1239)
Q Consensus 857 aR~~~~~----~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~s~-~aDa-Evi~la~~~l~~lgi~~~~ 925 (1239)
+|+++.. ...|+|+||+|+|||+|.++ .|.+||+|+|+|+||..+. .+++ |+|.++.++++.||+.. +
T Consensus 97 ~~~~~~~~~s~~~LPlr~~~~g~vfR~E~~~~~~Gl~R~reF~q~e~~i~~~~e~~~~e~~e~l~~~~~~l~~lgl~~-~ 175 (298)
T cd00771 97 CLIFKSKPRSYRDLPLRLAEFGTVHRYEQSGALHGLTRVRGFTQDDAHIFCTPDQIKEEIKGVLDLIKEVYSDFGFFD-Y 175 (298)
T ss_pred HHHHHhhccchhhCCeEEEEecCcccCCCCCCCCCccccccEEECCEEEEeCCcchHHHHHHHHHHHHHHHHHcCCCc-E
Confidence 9988863 24699999999999998775 3556899999999988755 3343 79999999999999986 9
Q ss_pred EEEECcHH
Q 000880 926 DIHLNHGD 933 (1239)
Q Consensus 926 ~i~lg~~~ 933 (1239)
.|.++++.
T Consensus 176 ~i~l~~~~ 183 (298)
T cd00771 176 KVELSTRP 183 (298)
T ss_pred EEEEEcCh
Confidence 99999986
No 456
>cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from prokaryotes and from the mitochondria of eukaryotes.
Probab=99.76 E-value=7e-19 Score=196.71 Aligned_cols=152 Identities=10% Similarity=0.071 Sum_probs=130.9
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccC--CCccccccEEEEeccCCCeeeecCC----
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHE---- 851 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~~~~~~D~~G~~l~LRPD---- 851 (1239)
..++|+.+++|.++.+++.|++.+++.|+++||++|.||+| ++.. +.+...++||+|.|.+|+.++|||+
T Consensus 18 ~~~~G~~~~lP~g~~l~~~i~~~~~~~~~~~G~~ei~~P~l~~~~~~~~sg~~~~~~~emy~~~d~~~~~l~LrPt~e~~ 97 (255)
T cd00779 18 QTSSGLYSWLPLGLRVLKKIENIIREEMNKIGAQEILMPILQPAELWKESGRWDAYGPELLRLKDRHGKEFLLGPTHEEV 97 (255)
T ss_pred cCCCceEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCccccCcccEEEecCCCCeEEEecCCcHH
Confidence 46899999999999999999999999999999999999999 3332 3446789999999999999999999
Q ss_pred CcHHHHHHHHhCCCCceeEEeecCeEEcC-CCCCC---CCceeEEeEEEeCCCCcccHH---HHHHHHHHHHHhcCCCCc
Q 000880 852 LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 852 ~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e-~~~~~---~~ef~Q~GvEiiG~~s~~aDa---Evi~la~~~l~~lgi~~~ 924 (1239)
+|..++|.+.+++..|+|+||+|+|||+| +|+.| .+||+|+|+++||.+...+|+ |++.++.++++.||++
T Consensus 98 ~t~~~~~~i~s~~~LPlr~~~~~~~FR~E~~~~~Gl~R~reF~q~e~~~~~~~~~~a~~~~~~i~~~~~~il~~Lgl~-- 175 (255)
T cd00779 98 ITDLVANEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFDIDEESLEETYEKMYQAYSRIFKRLGLP-- 175 (255)
T ss_pred HHHHHHhccccHhhCCHHHHhCcceecCCCCCCCceeeeeeEeHhhheeccCCHHHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 55566666665666799999999999999 88765 457999999999998888999 8888999999999994
Q ss_pred eEEEECcHHHH
Q 000880 925 CDIHLNHGDLL 935 (1239)
Q Consensus 925 ~~i~lg~~~i~ 935 (1239)
+.+..++.+.+
T Consensus 176 ~~~~~~~~~~~ 186 (255)
T cd00779 176 FVKVEADSGAI 186 (255)
T ss_pred EEEEEecCCCC
Confidence 88887776554
No 457
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.75 E-value=3.8e-18 Score=190.64 Aligned_cols=248 Identities=20% Similarity=0.276 Sum_probs=149.3
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCC---C-------ceeeeeeeee
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQH---Q-------HVVRYYQAWF 493 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~H---p-------nIv~l~~~~~ 493 (1239)
.+...+.||.|+++.||.+++..||+.+|+|++..... +....+++.+|.-....+.+ | .++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 45677899999999999999999999999999876553 23345667777655555433 1 1111111111
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHH---hcCCC----CHHHHHH
Q 000880 494 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHF----DKELAWH 566 (1239)
Q Consensus 494 e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~---~~~~l----~~~~~~~ 566 (1239)
-++ ...+ + ..........-.+.+++|+-+.++|.+++. ..... .......
T Consensus 93 i~~------~~~~---------~--------~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~ 149 (288)
T PF14531_consen 93 IPG------KPPF---------F--------ERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLS 149 (288)
T ss_dssp ETT------S-SE---------E--------EECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHH
T ss_pred EcC------CCcc---------e--------ecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHH
Confidence 000 0000 0 000000000112567888888888888764 22222 1222345
Q ss_pred HHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 000880 567 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 646 (1239)
Q Consensus 567 i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 646 (1239)
+..|+++.+++||+.|++|+||||+|+|++.+|.++|+||+.....+... .....+..|.+|
T Consensus 150 lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~------------------~~~~~~~~~~PP 211 (288)
T PF14531_consen 150 LTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY------------------RCSEFPVAFTPP 211 (288)
T ss_dssp HHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE------------------EGGGS-TTTS-H
T ss_pred HHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCcee------------------eccCCCcccCCh
Confidence 56899999999999999999999999999999999999999877543211 002345789999
Q ss_pred ccccCC-------CCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 000880 647 EIEQGW-------PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 716 (1239)
Q Consensus 647 E~l~~~-------~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~d 716 (1239)
|..... -.++.+.|.|+||+++|.|++ ||............ -..+.+.+...+.||+.+|+.|
T Consensus 212 e~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~-------f~~C~~~Pe~v~~LI~~lL~~~ 284 (288)
T PF14531_consen 212 ELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWD-------FSRCRDMPEPVQFLIRGLLQRN 284 (288)
T ss_dssp HHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGG-------GTTSS---HHHHHHHHHHT-SS
T ss_pred hhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccccc-------chhcCCcCHHHHHHHHHHccCC
Confidence 976431 237889999999999999997 87643321111000 1122244457899999999999
Q ss_pred CCCC
Q 000880 717 PSDR 720 (1239)
Q Consensus 717 P~~R 720 (1239)
|.+|
T Consensus 285 ~~~R 288 (288)
T PF14531_consen 285 PEDR 288 (288)
T ss_dssp GGGS
T ss_pred cccC
Confidence 9988
No 458
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=3.4e-17 Score=177.27 Aligned_cols=137 Identities=19% Similarity=0.267 Sum_probs=105.7
Q ss_pred EeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-----CCCceeeeeeeeeecCccccCCC
Q 000880 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-----QHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 429 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-----~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
.+.||+|+||.||. +..++.. +||++..... .....+.+|+.+++.+ .||||+++++++...
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~-------- 73 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD-------- 73 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC--------
Confidence 47899999999995 7777666 6999875432 2346789999999999 579999999987432
Q ss_pred CcCCCCcccccccccccccccccccccccccccE-EEEEeeccC---CCHHHHHHhcCCCCHHHHHHHHHHHHHHH-HHH
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTY-LYIQMEYCP---RTLRQVFESYDHFDKELAWHLFRQIVEGL-AHI 578 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~-l~iVmEy~~---gsL~~~l~~~~~l~~~~~~~i~~qI~~gL-~yL 578 (1239)
..... +.+||||++ ++|.+++.+. .+++. ..++.|++.++ +||
T Consensus 74 -----------------------------~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yL 121 (210)
T PRK10345 74 -----------------------------CGTGYVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYL 121 (210)
T ss_pred -----------------------------CCCeEEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHH
Confidence 01123 347899954 5999999763 56666 35678888877 999
Q ss_pred HhCCccccCCCcccEEEcC----CCCEEEeecCcch
Q 000880 579 HGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLAK 610 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~----~~~vKL~DFGlA~ 610 (1239)
|+++|+||||||+|||++. ++.++|+||+.+.
T Consensus 122 h~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 122 LDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred HHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 9999999999999999974 3479999944443
No 459
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=8.2e-17 Score=171.38 Aligned_cols=191 Identities=15% Similarity=0.114 Sum_probs=131.5
Q ss_pred EEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCch--hHHHHHHHHHHHHhcC-CCceeeeeeeeeecCccccCCCC
Q 000880 428 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--VNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 428 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~--~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
+...|++|+||+||.+.. .+..++.+.+.....-.. ....+.+|+.+|++|+ |++|++++++.
T Consensus 6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------------ 71 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------------ 71 (218)
T ss_pred cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc------------
Confidence 457899999999997766 578888887653332111 1125789999999995 57888887531
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
..|++|+|+.| +|.+.+.. . ...++.|++.+|.++|++||
T Consensus 72 --------------------------------~~~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GI 112 (218)
T PRK12274 72 --------------------------------GRHLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGV 112 (218)
T ss_pred --------------------------------CEEEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcC
Confidence 24899999976 67544321 1 23578899999999999999
Q ss_pred cccCC-CcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC-cchhh
Q 000880 584 IHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID-EKADM 661 (1239)
Q Consensus 584 iHrDL-Kp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~-~ksDI 661 (1239)
+|||| ||+|||++.++.++|+|||+|............ .....-.+-..+ -..+++.|++|+...-....+ ...++
T Consensus 113 vHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~-L~~rDl~~llk~-~~~y~~~~l~~~~~~~l~~~~~~~~~w 190 (218)
T PRK12274 113 AHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL-LAREDLRHLLKH-KRMYCPAALTPVERRVLKRTSWIRELW 190 (218)
T ss_pred ccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH-HHHHHHHHHHHH-HHhcCCCCCCHHHHhhhccchhHHHHH
Confidence 99999 799999999999999999999854321100000 000000000011 124889999999644322233 67899
Q ss_pred HHHHHHHHHhhc
Q 000880 662 YSLGIVFFELWH 673 (1239)
Q Consensus 662 wSlGviL~ELlt 673 (1239)
++.|+-+|.++|
T Consensus 191 ~~~g~~~~~~~~ 202 (218)
T PRK12274 191 FATGKPVYRFVT 202 (218)
T ss_pred HHhcchHHHHHh
Confidence 999999999997
No 460
>smart00591 RWD domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain.
Probab=99.70 E-value=1.1e-16 Score=154.98 Aligned_cols=104 Identities=40% Similarity=0.572 Sum_probs=92.9
Q ss_pred HHHHHhhhcCCceeeecCCCC--eEEEEEcCCCCCCCCCCCcEEEEEEEEcCCCCCCCCCccccccCCCCCHHHHHHHHH
Q 000880 37 EITALCAIFQEDCKVVSGSPP--QILVKLRPYSKDMGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLC 114 (1239)
Q Consensus 37 ElEaL~sIy~d~~~~~~~~~~--~~~i~i~~~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~~~~~~~~~l~~~~~~~l~~ 114 (1239)
|+|||+|||+|++..++.++. .|+|++++.+. +..+..+.+.|+|.+|++||+.+|.+.+.+..||+..++..|..
T Consensus 1 EieaL~sIy~~~~~~~~~~~~~~~~~i~l~~~~~--~~~~~~~~~~l~~~~p~~YP~~~P~i~~~~~~~l~~~~~~~l~~ 78 (107)
T smart00591 1 ELEALESIYPEDFEVIDEDARIPEITIKLSPSSD--EGEDQYVSLTLQVKLPENYPDEAPPISLLNSEGLSDEQLAELLK 78 (107)
T ss_pred ChHHHHhhccceeEEecCCCCccEEEEEEecCCC--CCCccceEEEEEEECCCCCCCCCCCeEEECCCCCCHHHHHHHHH
Confidence 799999999999988887666 89999977652 12233588999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCceeeehHHHHHHHHHHh
Q 000880 115 LLQDQANSNAREGRVMIFNLVEAAQEFLSE 144 (1239)
Q Consensus 115 ~L~e~~~e~~~~G~~mif~lv~~lke~L~~ 144 (1239)
.|.+.++++. |++|||+|++++||+|++
T Consensus 79 ~l~~~~~e~~--g~~~if~~v~~~~e~l~~ 106 (107)
T smart00591 79 KLEEIAEENL--GEVMIFELVEKLQEFLSE 106 (107)
T ss_pred HHHHHHHHhC--CCEEhhHHHHHHHHHHhc
Confidence 9999999999 999999999999999986
No 461
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=9.1e-17 Score=177.98 Aligned_cols=143 Identities=20% Similarity=0.154 Sum_probs=110.4
Q ss_pred CceEEeeeccCCceEEEEEE-EccCCcEEEEEEEecCCCCch----------------------hHHHHHHHHHHHHhcC
Q 000880 425 DFEELQPLGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSLP----------------------VNDRILREVATLSRLQ 481 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~-~~~~g~~vAVK~i~~~~~~~~----------------------~~~~~~~Ev~iL~~L~ 481 (1239)
.|.+.+.||+|+||.||+|. +..+|+.||||+++....... ....+.+|+..+..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777899999999999999 667999999999975431100 1123568999999997
Q ss_pred CCc--eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCC
Q 000880 482 HQH--VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH 558 (1239)
Q Consensus 482 Hpn--Iv~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~ 558 (1239)
+.+ +++++.. ...|+||||++| +|.........
T Consensus 109 ~~~i~~p~~~~~--------------------------------------------~~~~lV~E~~~g~~L~~~~~~~~~ 144 (237)
T smart00090 109 EAGVPVPKPIAW--------------------------------------------RRNVLVMEFIGGDGLPAPRLKDVE 144 (237)
T ss_pred hcCCCCCeeeEe--------------------------------------------cCceEEEEEecCCcccccccccCC
Confidence 633 2333211 113799999987 56554434445
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcccEEEcCCCCEEEeecCcchhc
Q 000880 559 FDKELAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612 (1239)
Q Consensus 559 l~~~~~~~i~~qI~~gL~yLHs~g-IiHrDLKp~NILl~~~~~vKL~DFGlA~~~ 612 (1239)
+....+..++.||+.+|.+||++| ++||||||+||+++ ++.++|+|||.|+..
T Consensus 145 ~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 145 PEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 667778899999999999999999 99999999999999 889999999998854
No 462
>KOG1637 consensus Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.68 E-value=1.1e-15 Score=171.99 Aligned_cols=351 Identities=15% Similarity=0.098 Sum_probs=233.3
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce------eccCCCccccccEEEEeccCCCeeeecCCCcHH
Q 000880 782 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 855 (1239)
Q Consensus 782 ~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~ 855 (1239)
....|+-.++|..+.+.+.+.+.++.-|++.||++|.||.+ .-+++++.+.++||+|.-. .++.+|.|.-++.
T Consensus 179 ~lSPGS~FflP~G~~iyN~Lv~fir~ey~~rGf~EVitPniy~~~LWe~SGHwqnY~enmF~~e~e-ke~~~LKPMNCPg 257 (560)
T KOG1637|consen 179 ELSPGSCFFLPHGTRIYNTLVDFIRAEYRKRGFTEVITPNIYNKKLWETSGHWQNYSENMFKFEVE-KEEFALKPMNCPG 257 (560)
T ss_pred cCCCcceeeccCcchHHHHHHHHHHHHHHhcCCceecCcchhhhhhhhhccchhhhhhhceeeeec-hhhhccCccCCCc
Confidence 45679999999999999999999999999999999999999 5566788999999999763 4569999966655
Q ss_pred HHHHHHhC----CCCceeEEeecCeEEcCCCC-----CCCCceeEEeEEEeCCCCc-ccHH-HHHHHHHHHHHhcCCCCc
Q 000880 856 FIRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASA-LTEA-EVLKVTMDIVTRFFHAES 924 (1239)
Q Consensus 856 iaR~~~~~----~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~s~-~aDa-Evi~la~~~l~~lgi~~~ 924 (1239)
-.=+..++ +..|+|+.-+|.+.|+|..+ .+.|+|+|-+++||+..++ ..+. -++..+..++.-+|..
T Consensus 258 HcLmf~~r~rS~reLPlR~aDFg~LHRnE~SGaLsGLTRvRrFqQDDaHIFCt~~Qi~~Eik~~l~fl~~vY~~fgf~-- 335 (560)
T KOG1637|consen 258 HCLMFAHRDRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTPDQVKEEIKGCLDFLDYVYGVFGFT-- 335 (560)
T ss_pred cccccccCCccHhhCCccccCcceeeeccccccccccceeeeecccCceEEecCccHHHHHHHHHHHHHHHHHhcccc--
Confidence 44333332 23599999999999998755 3566799999999999887 4444 5666666666666764
Q ss_pred eEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Q 000880 925 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 1004 (1239)
Q Consensus 925 ~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~l~~~~~g~ 1004 (1239)
+.+.|+.+. + +.+|.-+.|-++-..+=..++ +.|-+-.....=. .+.|+
T Consensus 336 f~l~lSTRP--e---~~lG~l~~Wd~AE~~L~~al~----------------------e~g~pw~lN~GDG----AFYGP 384 (560)
T KOG1637|consen 336 FKLNLSTRP--E---KFLGDLETWDEAEFKLEEALN----------------------ESGEPWVLNPGDG----AFYGP 384 (560)
T ss_pred ceeEeccCh--H---HhccCHHHHHHHHHHHHHHHH----------------------HhCCCceecCCCc----ccccc
Confidence 889999864 2 344544444332221111111 1110000000000 11222
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCccccccccccccccccc
Q 000880 1005 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1084 (1239)
Q Consensus 1005 ~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD 1084 (1239)
+|.+-+....+-..-+.++---|.
T Consensus 385 ----------------------------------KIDi~l~Dal~r~hQcaTIQLDFq---------------------- 408 (560)
T KOG1637|consen 385 ----------------------------------KIDITLDDALGRKHQCATIQLDFQ---------------------- 408 (560)
T ss_pred ----------------------------------eeeeEhhhhcCcccceeeeeeccc----------------------
Confidence 222222222222222333211110
Q ss_pred chhhhccccccccccCCCCCCc-eeeeec-c-HHHHHhhCC---CCCcCCCCCCCceEEEEecCCCccHHHHHHHHHHHH
Q 000880 1085 YLLHRMWDREYVGYASRTNPPS-GVGASL-A-LETIIQHYP---VDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1158 (1239)
Q Consensus 1085 ~L~~~fg~~~~~~~~g~~~~~p-AvGfai-g-ldrl~~~L~---~~~~~~~~~~~~~v~v~~~~~~~~~~~a~~ia~~Lr 1158 (1239)
|..+|.-+ +....|. ...| -|.-|| | ++|++++|. .+..|.|. .|.++.||+.+ +..+.+|-++...|+
T Consensus 409 -LP~rFdL~-y~~~~g~-~erPVmIHRAIlGSvERmiaiL~E~~~gkwPFWl-SPRq~~vIpVs-e~~~~ya~~V~~ql~ 483 (560)
T KOG1637|consen 409 -LPIRFDLE-YETEDGD-LERPVMIHRAILGSVERMIAILLESYGGKWPFWL-SPRQAVVIPVS-EGPLDYATSVQKQLE 483 (560)
T ss_pred -ChhhcCce-eeccccc-ccchhhHHHHHhhhHHHHHHHHHHHhCCCCCeee-ccceEEEEECC-CcchhHHHHHHHHHH
Confidence 11111000 0000000 0112 223333 3 899999986 33344444 56788999996 788899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEc---cCCcccccchHHHHHHHHHHH
Q 000880 1159 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHL---DVKKEKEVQRESLVRFLLDAI 1228 (1239)
Q Consensus 1159 ~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l---~~~~q~~v~~~el~~~i~~~l 1228 (1239)
..|+-+++... ...+.+.++.|.-.++.++++||++|.+.++|.||.+ +++.+..++++++.+.++++-
T Consensus 484 ~a~f~~Dld~t-~~tl~kkir~Aqla~yn~i~VVGdkE~~~~~vnVr~Rd~~~~~~~~~~tie~~~~~~~~l~ 555 (560)
T KOG1637|consen 484 EAGFYVDLDPT-DSTLRKKIRNAQLAHYNFIFVVGDKEVETGRVNVRTRDNRDNKTESEMTIEELSDEFKELK 555 (560)
T ss_pred hhhceeecCCc-cchHHHHHhhhhhcceeEEEEEchhhhhcCceeeeccccccccccceeeHHHHHHHHHHhH
Confidence 99998998777 4789999999999999999999999999999999997 455566888999888877654
No 463
>TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type. This model describes a glycyl-tRNA synthetase distinct from the two alpha and two beta chains of the tetrameric E. coli glycyl-tRNA synthetase. This enzyme is a homodimeric class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes His, Ser, Pro, and this set of glycyl-tRNA synthetases.
Probab=99.67 E-value=5.5e-15 Score=177.66 Aligned_cols=121 Identities=17% Similarity=0.169 Sum_probs=99.1
Q ss_pred Ccee-eeeccHHHHHhhCCC-CCc-------------CCCCCCCceEEEEecCCC-ccHHHHHHHHHHHHHcCCeEEEee
Q 000880 1105 PSGV-GASLALETIIQHYPV-DFK-------------PVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFVP 1168 (1239)
Q Consensus 1105 ~pAv-Gfaigldrl~~~L~~-~~~-------------~~~~~~~~~v~v~~~~~~-~~~~~a~~ia~~Lr~~G~~ve~~~ 1168 (1239)
+|-| --|+|+|||+.+|.+ ... .+...+|.+|+|++.+++ .....|.++++.||..|++|+++.
T Consensus 414 ~P~VIepS~GIdRIi~ALle~~~~e~~~~~~~r~vL~lp~~lAP~kV~VIpl~~~~el~~~A~eIa~~LR~~GI~VeiD~ 493 (551)
T TIGR00389 414 IPHVIEPSFGIDRIIYALLEHSYQEEVLDGEEREVLRLPPHLAPIKVAVLPLVNKEELKEIAKEIFQALRKTGIRIKYDD 493 (551)
T ss_pred cceEEEcccCHHHHHHHHHHhhCccccccccccceeccCCccCCceEEEEEecCcHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 4544 778999999866531 111 111226889999998522 267899999999999999999877
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHH
Q 000880 1169 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1227 (1239)
Q Consensus 1169 ~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~ 1227 (1239)
. . ++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++.+.+.++
T Consensus 494 s-~-sIGKq~rrADeiGiPf~IIIG~~EledgtVTIRdRdT~eQ~~I~ldeL~~~L~e~ 550 (551)
T TIGR00389 494 S-G-TIGKRYRRADEIGTPFCVTIDFETLEDETVTIRERDSMKQVRVKIKELPSYIKKL 550 (551)
T ss_pred C-C-CHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEeeHHHHHHHHHhh
Confidence 5 4 5999999999999999999999999999999999999999999999998887654
No 464
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.65 E-value=3.4e-16 Score=185.34 Aligned_cols=234 Identities=26% Similarity=0.419 Sum_probs=165.7
Q ss_pred HHhcCCCceeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHh
Q 000880 477 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES 555 (1239)
Q Consensus 477 L~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~ 555 (1239)
|+.+.|.|+.+++|.++. ...+++|.+||. |+|.+.+..
T Consensus 1 l~~l~h~n~~~f~g~~~~----------------------------------------~~~~~~i~~~c~rGsl~D~i~~ 40 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD----------------------------------------GPEMIVIWEYCSRGSLLDILSN 40 (484)
T ss_pred CcccchhhhhhheeeEec----------------------------------------CCceEEEEeeecCccHHhHHhc
Confidence 467899999999999854 256789999997 799999976
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCCcccEEEcCCCCEEEeecCcchhccccccccCCCCCCCCCCcccc
Q 000880 556 -YDHFDKELAWHLFRQIVEGLAHIHGQGI-IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 633 (1239)
Q Consensus 556 -~~~l~~~~~~~i~~qI~~gL~yLHs~gI-iHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1239)
.-.+++-....++++|+.||+|||...| .|+.|++.|++++....+||+|||+........ .. ..
T Consensus 41 ~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~-~~------------~~ 107 (484)
T KOG1023|consen 41 EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA-EP------------EA 107 (484)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccc-cc------------cc
Confidence 4468888899999999999999999876 999999999999999999999999988753200 00 00
Q ss_pred CcccccCccCCCcccccCCC--C----CCcchhhHHHHHHHHHhhc---CCchh----HHHHHHHHhhh-h-cCCCCCcc
Q 000880 634 GTGQVGTYFYTAPEIEQGWP--K----IDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLK-Q-KGELPPSW 698 (1239)
Q Consensus 634 ~~~~~GT~~Y~APE~l~~~~--~----~~~ksDIwSlGviL~ELlt---Pf~~~----~~~~~~~~~~~-~-~~~~p~~~ 698 (1239)
.....-...|.|||.+.+.. . .+.++|+||||++++|+++ ||... ...++...... . ....|..+
T Consensus 108 ~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~ 187 (484)
T KOG1023|consen 108 HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIE 187 (484)
T ss_pred cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchh
Confidence 11223456799999987631 1 4678999999999999995 77642 22233333222 1 11233222
Q ss_pred c--cCCHHHHHHHHHccCCCCCCCCCHHHHHhcc--CCCC--chHHHHHHHHHhcCCCCCCcchhhhccccccchhh
Q 000880 699 V--AKFSEQESLLRRLMSPSPSDRPSATELLQDA--LPPQ--MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETL 769 (1239)
Q Consensus 699 ~--~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~--~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ 769 (1239)
. ...+++..+++.||..+|.+||+++++-... .... ....+++..++++. .|...++..+++.+.
T Consensus 188 ~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~~~nl~D~m~~~le------~Y~~nLe~~v~eRt~ 258 (484)
T KOG1023|consen 188 LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSSKGNLMDSLFRMLE------SYADNLEKLVDERTA 258 (484)
T ss_pred hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccccccchhHHHHHHHHH------HHHhhhHHHHHHHHH
Confidence 1 3345688999999999999999999985432 2222 12356666666553 366666666666443
No 465
>cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain.
Probab=99.63 E-value=1.9e-15 Score=169.63 Aligned_cols=148 Identities=14% Similarity=0.145 Sum_probs=124.0
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----eccCCCcc---ccccEEEEeccCC----CeeeecCC
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQ---FKRNTVKLLTHGG----DLLELSHE 851 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~---~~~~~~~~~D~~G----~~l~LRPD 851 (1239)
.++|+.+++|....+++.|++.+++.++++||++|.||.| ++.+.|.. ..++||.+.|.+| +.++|||+
T Consensus 20 ~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~~l~LrPt 99 (264)
T cd00772 20 PGRGIINFLPLAKAILDKIENVLDKMFKEHGAQNALFPFFILASFLEKEAEHDEGFSKELAVFKDAGDEELEEDFALRPT 99 (264)
T ss_pred CCCCEEEECCcHHHHHHHHHHHHHHHHHHcCCeEEECCeeccHHHHhhcCCcccccCccceEEEeCCCCccCceEEECCC
Confidence 4789999999999999999999999999999999999999 33222322 3478999999887 89999999
Q ss_pred CcHHHHHHHHhC----CCCceeEEeecCeEEcC-CCCC---CCCceeEEeEEEeCCCCcccHHHHHHHH---HHHHHhcC
Q 000880 852 LRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKVT---MDIVTRFF 920 (1239)
Q Consensus 852 ~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~s~~aDaEvi~la---~~~l~~lg 920 (1239)
.|++++++++.. +..|+|+||+|+|||+| +++. |.+||+|.++++|+.....+|+|+..+. .++++.||
T Consensus 100 ~e~~~~~~~~~~i~s~~~LPlrl~~~~~~fR~E~r~~~Gl~R~reF~~~e~~~~~~~~e~a~~e~~~~~~~~~~i~~~l~ 179 (264)
T cd00772 100 LEENIGEIAAKFIKSWKDLPQHLNQIGNKFRDEIRPRFGFLRAREFIMKDGHSAHADAEEADEEFLNMLSAYAEIARDLA 179 (264)
T ss_pred CCHHHHHHHHhhhhhhhccCeeEEEEeCeEeCcCCCCCCcceeeEEEEeeeEEecCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988763 35699999999999998 7754 4457999999999988888888776665 89999999
Q ss_pred -CCCceEEEECcH
Q 000880 921 -HAESCDIHLNHG 932 (1239)
Q Consensus 921 -i~~~~~i~lg~~ 932 (1239)
+. +.+.....
T Consensus 180 ~lp--~~~~~~~~ 190 (264)
T cd00772 180 AID--FIEGEADE 190 (264)
T ss_pred Ccc--EEEEEcCC
Confidence 53 77766553
No 466
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.62 E-value=3.2e-15 Score=162.71 Aligned_cols=135 Identities=27% Similarity=0.342 Sum_probs=107.8
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCCch------hHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCC
Q 000880 430 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 503 (1239)
Q Consensus 430 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~ 503 (1239)
+.||+|++|.||+|.+ +|..+++|+......... ....+.+|+.++..+.|++|+....++..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--------- 70 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--------- 70 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe---------
Confidence 5799999999999988 588899998653322111 12457889999999999988655444321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000880 504 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 582 (1239)
Q Consensus 504 ~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~g 582 (1239)
....+++|||++| +|.+++..... ....++.+++.+|.++|+.|
T Consensus 71 -------------------------------~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 71 -------------------------------PENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred -------------------------------CCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCC
Confidence 2345899999975 89888865332 77889999999999999999
Q ss_pred ccccCCCcccEEEcCCCCEEEeecCcchh
Q 000880 583 IIHRDLTPNNIFFDARNDIKIGDFGLAKF 611 (1239)
Q Consensus 583 IiHrDLKp~NILl~~~~~vKL~DFGlA~~ 611 (1239)
++|||++|.|||++ ++.++|+|||++..
T Consensus 116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999999 78999999999874
No 467
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.61 E-value=2.1e-15 Score=162.84 Aligned_cols=136 Identities=26% Similarity=0.226 Sum_probs=104.2
Q ss_pred ceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCch--------------------hHHHHHHHHHHHHhcCCCce
Q 000880 426 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--------------------VNDRILREVATLSRLQHQHV 485 (1239)
Q Consensus 426 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~--------------------~~~~~~~Ev~iL~~L~HpnI 485 (1239)
|.+.+.||+|+||.||+|.+. +|+.||||+++....... ......+|..++..+.|+++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 556688999999999999886 899999999875431110 11236678889998888753
Q ss_pred --eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHH
Q 000880 486 --VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKE 562 (1239)
Q Consensus 486 --v~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~ 562 (1239)
+..++ ....+++|||++| +|..+.. ..
T Consensus 96 ~v~~~~~--------------------------------------------~~~~~lv~e~~~g~~L~~~~~------~~ 125 (198)
T cd05144 96 PVPKPID--------------------------------------------WNRHAVVMEYIDGVELYRVRV------LE 125 (198)
T ss_pred CCCceee--------------------------------------------cCCceEEEEEeCCcchhhccc------cc
Confidence 22221 1123899999976 6655432 13
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhc
Q 000880 563 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612 (1239)
Q Consensus 563 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~ 612 (1239)
....++.+|+.++.++|+.||+||||||+||+++.++.++|+|||++...
T Consensus 126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 45678899999999999999999999999999999999999999999654
No 468
>PF05773 RWD: RWD domain; InterPro: IPR006575 The RWD eukaryotic domain is found in RING finger (IPR001841 from INTERPRO) and WD repeat (IPR001680 from INTERPRO) containing proteins and DEXDc-like helicase (IPR001410 from INTERPRO) subfamily related to the ubiquitin-conjugating enzymes domain (IPR000608 from INTERPRO). ; GO: 0005515 protein binding; PDB: 2EBM_A 2EBK_A 2DAX_A 2DAW_A 2DAY_A 2DMF_A 1UKX_A 2YZ0_A.
Probab=99.60 E-value=1.6e-15 Score=148.34 Aligned_cols=112 Identities=32% Similarity=0.390 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHhhhcCCce-eeecCCCCeEEEEEcCCCCCCCCCCCcEEEEEEEEcCCCCCCCCCccccccCCCCCHH
Q 000880 29 DDNELLSEEITALCAIFQEDC-KVVSGSPPQILVKLRPYSKDMGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKS 107 (1239)
Q Consensus 29 ~~~eeq~~ElEaL~sIy~d~~-~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~~~~~~~~~l~~~ 107 (1239)
|+.|+|++|++||+|||++++ ......+..+++++.+.... ........+.|+|+||++||+.+|.+.+.+..++...
T Consensus 1 e~~e~~~~EieaL~sIy~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~l~~~~p~~YP~~~P~i~l~~~~~~~~~ 79 (113)
T PF05773_consen 1 ECEEQQEEEIEALQSIYPDDFIEIESKSPPSLEVKLDESSSS-FESSSFPSVTLHFTLPPGYPESPPKISLESPKNSRNE 79 (113)
T ss_dssp HHHHHHHHHHHHHHHHSSSSESSSTSSSSEEEEEEE--CEEC-CTTTTSEEEEEEEEE-SSTTSS--EEEEEEESSSHCH
T ss_pred CCHHHHHHHHHHHHHHcCCCccccccCCCCceeeeecccccc-cccccceeEEEEEeCCCcCCCcCCEEEEEcCCCCCHH
Confidence 357899999999999999998 44455566888888432211 2233357899999999999988999999988888778
Q ss_pred HHHHHHHHHHHHHHHhCCCCceeeehHHHHHHHHH
Q 000880 108 DADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFL 142 (1239)
Q Consensus 108 ~~~~l~~~L~e~~~e~~~~G~~mif~lv~~lke~L 142 (1239)
++..|.+.|.+.++++.. |++|||++++++||+|
T Consensus 80 ~~~~l~~~l~~~~~~~~~-G~~~i~~ii~~~qe~~ 113 (113)
T PF05773_consen 80 QIEKLNKELEQIAEENRQ-GEPCIFQIIEWLQENL 113 (113)
T ss_dssp HHHHHHHHHHHHHHHSTT-TS-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC-CcCHHHHHHHHHHhhC
Confidence 999999999999999987 9999999999999986
No 469
>cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP binding and hydrolysis. This alignment contains only sequences from the GlyRS form which homodimerizes. The heterotetramer glyQ is in a different family of class II aaRS. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the N-terminus of the accessory subunit of mitochondrial polymerase gamma (Pol gamma b). Pol gamma b stimulates processive DNA synthesis and is functional as a homodimer, which can associate with the catalytic subunit Pol gamma alpha to form a heterotrimer. Despite significant both structural and sequence similarity with Gly
Probab=99.59 E-value=2.6e-15 Score=167.86 Aligned_cols=133 Identities=15% Similarity=0.157 Sum_probs=113.7
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcC--CccccccceeccCCCccccccEEEEe----ccCCCeeeecCCCc---
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHC--AKHLEIEPMYLLGDCPQFKRNTVKLL----THGGDLLELSHELR--- 853 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~G--y~~I~tP~~~~~~~~~~~~~~~~~~~----D~~G~~l~LRPD~T--- 853 (1239)
.+.|+.|++|.++.+++.|++.+++.|.++| |++|.||++... +||++. |.+++.++||||.|
T Consensus 20 ~~~G~~d~~P~g~~l~~~i~~~~~~~~~~~g~~~~~i~tP~i~~~--------~mf~~~~g~~d~~~~~~~Lrp~~~~~~ 91 (254)
T cd00774 20 GVAGFYDYGPLGVELKNNIKSAWRKSFVLEEEDMLEIDSPIITPE--------LMFKTSIGPVESGGNLGYLRPETAQGI 91 (254)
T ss_pred ChhcccccCchHHHHHHHHHHHHHHHHHhcCCCeEEEeccccCCH--------HHheeeecccCCCCcccccCCcccchH
Confidence 4789999999999999999999999999996 999999998433 677775 55678999999999
Q ss_pred -HHHHHHHHhCC-CCceeEEeecCeEEcCCCC----CCCCceeEEeEEEeCCCCcccH--HHHHHHHHHHHHhcCCCC
Q 000880 854 -LPFIRWAISNQ-KSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAE 923 (1239)
Q Consensus 854 -~~iaR~~~~~~-~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~s~~aD--aEvi~la~~~l~~lgi~~ 923 (1239)
++++|.+.++. ..|+|+||+|+|||+|.++ .+.+||+|+|+|+||.++...+ ..++.+..+++.++|+..
T Consensus 92 ~~~~~~~~~~~~~~lP~~~~qig~~fR~E~~~~~gl~R~ReF~q~d~~~f~~~~~~~e~~~~v~~~~~~~l~~~G~~~ 169 (254)
T cd00774 92 FVNFKNLLEFNRRKLPFGVAQIGKSFRNEISPRNGLFRVREFTQAEIEFFVDPEKSHPWFDYWADQRLKWLPKFAQSP 169 (254)
T ss_pred HHHHHHHHHHhCCCCCchhhhhchhhccccCcccceeeeccchhhheeeeECCCCchHHHHHHHHHHHHHHHHcCCCc
Confidence 79999888754 7799999999999998755 3667899999999998765332 278999999999999853
No 470
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=5.3e-15 Score=186.14 Aligned_cols=237 Identities=20% Similarity=0.299 Sum_probs=163.9
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCceeeeeeeeeecCccc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVAD 499 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIv~l~~~~~e~~~~~ 499 (1239)
...|.+.+.||+|+||+||+|.+.. |+.||+|+-+....- +|+--.+++.+|+ -+-|..+..+++
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W-----EfYI~~q~~~RLk~~~~~~~~~~~~a~~------ 764 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW-----EFYICLQVMERLKPQMLPSIMHISSAHV------ 764 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce-----eeeehHHHHHhhchhhhcchHHHHHHHc------
Confidence 4678899999999999999999985 999999987543321 1222334455555 122333322221
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 000880 500 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 578 (1239)
Q Consensus 500 ~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yL 578 (1239)
-.+.-++|+||.+ |+|.+++...+.+++..+..++.|++.-+++|
T Consensus 765 ----------------------------------~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~l 810 (974)
T KOG1166|consen 765 ----------------------------------FQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHL 810 (974)
T ss_pred ----------------------------------cCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHH
Confidence 1223379999997 89999999888899999999999999999999
Q ss_pred HhCCccccCCCcccEEEcC-------CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 000880 579 HGQGIIHRDLTPNNIFFDA-------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 651 (1239)
Q Consensus 579 Hs~gIiHrDLKp~NILl~~-------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 651 (1239)
|.++|||+||||+|+||.. ...++|+|||-|--+..-. . + ...+..++|-.+--+|.+.|
T Consensus 811 H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp--------~---~--~~F~~~~~td~f~C~EM~~g 877 (974)
T KOG1166|consen 811 HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFP--------D---G--TKFKAVWHTDLFDCIEMREG 877 (974)
T ss_pred HhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcC--------C---C--cEEeeeeccccchhHHHhcC
Confidence 9999999999999999943 2359999999986542110 0 0 12245678888999999999
Q ss_pred CCCCCcchhhHHHHHHHHHhhcCCchhHHHHHHHHhhhhcCC-CCCccccCCH-H-HHHHHHHccCCCCCCCCCHHHHH
Q 000880 652 WPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGE-LPPSWVAKFS-E-QESLLRRLMSPSPSDRPSATELL 727 (1239)
Q Consensus 652 ~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~-e-~~~LI~~~L~~dP~~RPta~eiL 727 (1239)
..++..+|.|.|+.+++-|+ |+..+. ....... .+..++..+. + ..+++..+|+.|-..=|...++.
T Consensus 878 -rpWtYq~DyfGlAa~~h~mL--FG~y~q------~~~g~~~~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr 947 (974)
T KOG1166|consen 878 -RPWTYQIDYFGLAATVHVML--FGKYME------VKNGSSWMVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELR 947 (974)
T ss_pred -CCCchhhhhHHHHHHHHHHH--HHHHHH------hcCCcceeccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHH
Confidence 56899999999999999998 444443 1111111 1111122111 2 24788888885444445555543
No 471
>COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis]
Probab=99.58 E-value=2.5e-14 Score=165.52 Aligned_cols=125 Identities=18% Similarity=0.162 Sum_probs=102.5
Q ss_pred Ccee-eeeccHHHHHhhC-C-----CCC------c-CCCCCCCceEEEEecCC-CccHHHHHHHHHHHHHcCCeEEEeeC
Q 000880 1105 PSGV-GASLALETIIQHY-P-----VDF------K-PVRNEAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFVPV 1169 (1239)
Q Consensus 1105 ~pAv-Gfaigldrl~~~L-~-----~~~------~-~~~~~~~~~v~v~~~~~-~~~~~~a~~ia~~Lr~~G~~ve~~~~ 1169 (1239)
+|.| -=|+||||++-++ + ... + .++..+|.++.|+|+-. ++....|.++.+.||+.|+.|....
T Consensus 415 iP~VIEPSfGidRi~y~~l~~ay~~ee~~e~R~vLrl~p~lAPikvaVlPL~~k~~l~~~a~~i~~~L~~~~~~v~yDd- 493 (558)
T COG0423 415 IPHVIEPSFGIDRIFYALLEHAYTEEEVEEKRIVLRLPPDLAPIKVAVLPLVKKDELVEIAKEIFEKLRELGFNVDYDD- 493 (558)
T ss_pred cCceeccCCCchHHHHHHHHHhhcccccccceeEEecCcccCceEEEEEeeecccchhHHHHHHHHHHHhcCceEEecC-
Confidence 5655 7799999995443 2 111 0 12235788899998842 2378899999999999999998433
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHhh
Q 000880 1170 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1231 (1239)
Q Consensus 1170 ~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~~ 1231 (1239)
..+++++++++++.|.||.|.+--+.+++++||||++++.+|+.|+++++..+|.+.+.+.
T Consensus 494 -sGsIGrRYrR~DEIGtPfcVTvD~eTleD~tVTiReRDs~~QvRv~i~el~~~l~~~~~~~ 554 (558)
T COG0423 494 -SGSIGRRYRRQDEIGTPFCVTVDFETLEDNTVTIRERDSMEQVRVKIEELADYLRELIKGG 554 (558)
T ss_pred -CCcHhhhhhhccccCCceEEEecCCcccCCcEEEeecCchheeeeeHHHHHHHHHHHhccc
Confidence 4599999999999999999999999999999999999999999999999999999988754
No 472
>PRK14894 glycyl-tRNA synthetase; Provisional
Probab=99.57 E-value=1.1e-13 Score=161.19 Aligned_cols=97 Identities=19% Similarity=0.198 Sum_probs=86.1
Q ss_pred CCCceEEEEecCCC--ccHHHHHHHHHHHHHcCC-eEEEeeCCCCCHHHHHHHHHhCCCcEEEEE-------cCCcccCC
Q 000880 1131 EAGTSVLVCSRGGG--GLLVERMELVAELWEENI-KAQFVPVPDPSLTEQYEYASEHDIKCLVIL-------TDTGAQKG 1200 (1239)
Q Consensus 1131 ~~~~~v~v~~~~~~--~~~~~a~~ia~~Lr~~G~-~ve~~~~~~~~l~k~~~~A~~~g~~~~vii-------g~~E~~~~ 1200 (1239)
-+|.+|.|+++.++ ....+|.++++.|++.|+ +|+++. +.+++++++.|+..|+||+|+| |++|.+++
T Consensus 432 LAPvQVaVLPLs~~~~~l~eyAkeI~~~L~~~Gi~rv~~Dd--sesIGKKyRraDeiGiPy~ITVD~~Tl~dGdkE~e~g 509 (539)
T PRK14894 432 LAPIKVAVFPLKRNHEGLVATAKAVRRQLQVGGRMRTVYDD--TGAIGKLYRRQDEIGTPFCITVDFDTIGQGKDPALAG 509 (539)
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHHHHCCCceEEEcC--CCCHhHHHHhhhccCCCEEEEEeccccccccchhhcC
Confidence 46889999998621 234899999999999998 999665 4599999999999999999999 89999999
Q ss_pred eEEEEEccCCcccccchHHHHHHHHHHHH
Q 000880 1201 LVKVRHLDVKKEKEVQRESLVRFLLDAIA 1229 (1239)
Q Consensus 1201 ~v~vk~l~~~~q~~v~~~el~~~i~~~l~ 1229 (1239)
+|+||++++++|..++++++++.|++.+.
T Consensus 510 TVTVR~RDs~eQ~rV~ideli~~L~~~~~ 538 (539)
T PRK14894 510 TVTVRDRDTMAQERVPISELEAYLRDRVS 538 (539)
T ss_pred eEEEEEeCCCeEEEEEHHHHHHHHHHHhc
Confidence 99999999999999999999999988764
No 473
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.57 E-value=1.1e-14 Score=157.13 Aligned_cols=131 Identities=27% Similarity=0.322 Sum_probs=101.1
Q ss_pred eeccCCceEEEEEEEccCCcEEEEEEEecCCCCc-h-----hHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCC
Q 000880 431 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-P-----VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 504 (1239)
Q Consensus 431 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~-----~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~ 504 (1239)
.||+|+||.||+|.+ +|..+++|+........ . ...++.+|+.+++.+.|+++....-.+..
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~---------- 68 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD---------- 68 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----------
Confidence 389999999999985 57899999865332111 1 12567889999999998875433322211
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 000880 505 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 583 (1239)
Q Consensus 505 ~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~gI 583 (1239)
....+++|||++| +|.+++..... .++.+++.+|.+||+.|+
T Consensus 69 ------------------------------~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi 111 (199)
T TIGR03724 69 ------------------------------PDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGI 111 (199)
T ss_pred ------------------------------CCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCe
Confidence 2234899999975 88887754321 789999999999999999
Q ss_pred cccCCCcccEEEcCCCCEEEeecCcchh
Q 000880 584 IHRDLTPNNIFFDARNDIKIGDFGLAKF 611 (1239)
Q Consensus 584 iHrDLKp~NILl~~~~~vKL~DFGlA~~ 611 (1239)
+|||++|.|||++ ++.+++.|||++..
T Consensus 112 ~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 112 VHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999999999 89999999999875
No 474
>PLN02734 glycyl-tRNA synthetase
Probab=99.57 E-value=2.2e-14 Score=174.62 Aligned_cols=122 Identities=19% Similarity=0.173 Sum_probs=98.9
Q ss_pred Ccee-eeeccHHHHHhhC-CCCC------------cCCCCCCCceEEEEecCCC-ccHHHHHHHHHHHHHcCCeEEEeeC
Q 000880 1105 PSGV-GASLALETIIQHY-PVDF------------KPVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFVPV 1169 (1239)
Q Consensus 1105 ~pAv-Gfaigldrl~~~L-~~~~------------~~~~~~~~~~v~v~~~~~~-~~~~~a~~ia~~Lr~~G~~ve~~~~ 1169 (1239)
+|.| --++||+||+.++ ++.. ..+...+|.+|.|+++..+ .....|.++++.||+.|++|+++..
T Consensus 528 iP~VIEPS~GIgRIl~AilE~s~~~~~~De~R~~L~~Pp~IAP~qVaIlPL~~~ee~~~~A~eLa~~LR~~GIrVelDd~ 607 (684)
T PLN02734 528 TPSVIEPSFGIGRIIYCLFEHSFYTRPGDEQLNVFRFPPLVAPIKCTVFPLVQNQQLNAVAKVISKELTAAGISHKIDIT 607 (684)
T ss_pred cCceEecCccHHHHHHHHHHHHhccccCCCcceEEecCcccCCcEEEEEEecCChHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 5655 7789999997665 3111 1223356778777776422 4678999999999999999998765
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcccccchHHHHHHHHHHHHhh
Q 000880 1170 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1231 (1239)
Q Consensus 1170 ~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i~~~l~~~ 1231 (1239)
..++++++++|++.|+|++|+||. +|+|+||++.+++|..++++++++.|...+++.
T Consensus 608 -~~SIGKRyrrADeiGIPf~ItIG~----dgtVTIRdRdsgeQ~rV~ldeLv~~I~~li~~~ 664 (684)
T PLN02734 608 -GTSIGKRYARTDELGVPFAVTVDS----DGSVTIRERDSKDQVRVPVEEVASVVKDLTDGR 664 (684)
T ss_pred -CCCHhHHHHHHHHcCCCEEEEECC----CCeEEEEECCCCceEEeeHHHHHHHHHHHHcCC
Confidence 569999999999999999999997 799999999999999999999999998887643
No 475
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=2.7e-16 Score=194.60 Aligned_cols=260 Identities=24% Similarity=0.361 Sum_probs=199.0
Q ss_pred cCCceEEeeeccCCceEEEEEEEccC-CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeecCcccc
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIv~l~~~~~e~~~~~~ 500 (1239)
...|.+.+.||+|+|+.|-.+....+ ...+|+|.+.....+......+..|..+-+.+. |+|++.+++...+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~------ 92 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS------ 92 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC------
Confidence 35677788899999999988877533 456788877766555555566777888888887 9999999877532
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHH-HhcC-CCCHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVF-ESYD-HFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l-~~~~-~l~~~~~~~i~~qI~~gL~y 577 (1239)
....++.++|.. +++...+ .... ..+...+..++.|+..++.|
T Consensus 93 ----------------------------------~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~ 138 (601)
T KOG0590|consen 93 ----------------------------------PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSY 138 (601)
T ss_pred ----------------------------------CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccc
Confidence 456688889975 4777777 5444 67888899999999999999
Q ss_pred HH-hCCccccCCCcccEEEcCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCccccc-CccCCCcccccCCCC
Q 000880 578 IH-GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG-TYFYTAPEIEQGWPK 654 (1239)
Q Consensus 578 LH-s~gIiHrDLKp~NILl~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~~ 654 (1239)
+| ..++.||||||+|.+++..+ .++++|||+|..+... .+........+| ++.|+|||.+.+...
T Consensus 139 ~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~ 206 (601)
T KOG0590|consen 139 LHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK------------NGAERSLKDRCGSSPPYGAPEHLSGKAY 206 (601)
T ss_pred cCcccccccCCCCCccchhccCCCcccCCCchhhcccccc------------CCcceeeecccCCCCCCCCcccccchhh
Confidence 99 99999999999999999999 9999999999876431 111122344578 999999999988556
Q ss_pred CCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcC-C-CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 000880 655 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-E-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 729 (1239)
Q Consensus 655 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~-~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 729 (1239)
..+..|+||.|+++.-+++ |+................. . ....|........+++.+++..+|..|.+.+++-.+
T Consensus 207 ~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 207 RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 7789999999999999985 5544333222211111111 1 234566777788999999999999999999999999
Q ss_pred cCCCC
Q 000880 730 ALPPQ 734 (1239)
Q Consensus 730 ~~~~~ 734 (1239)
+|...
T Consensus 287 ~~~~~ 291 (601)
T KOG0590|consen 287 NWLSS 291 (601)
T ss_pred ccccc
Confidence 98876
No 476
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.55 E-value=2.2e-14 Score=178.03 Aligned_cols=136 Identities=26% Similarity=0.282 Sum_probs=105.3
Q ss_pred CceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CCc-----hhHHHHHHHHHHHHhcCCCceeeeeeeeeecCcc
Q 000880 425 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 425 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~-----~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~ 498 (1239)
.|...+.||+|+||+||+|.+. +..+++|+...+. ... .....+.+|+.+++.++|++|+..+.++..
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~---- 407 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD---- 407 (535)
T ss_pred ccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe----
Confidence 3456789999999999999876 4445555432221 111 123568899999999999998876544422
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 577 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~y 577 (1239)
....++||||++| +|.+++. ....++.|++.+|.|
T Consensus 408 ------------------------------------~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~ 443 (535)
T PRK09605 408 ------------------------------------PEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAK 443 (535)
T ss_pred ------------------------------------CCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHH
Confidence 1235799999975 8888875 356789999999999
Q ss_pred HHhCCccccCCCcccEEEcCCCCEEEeecCcchh
Q 000880 578 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 611 (1239)
Q Consensus 578 LHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~ 611 (1239)
||++|++||||||+|||+ .++.++|+|||+|+.
T Consensus 444 lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 444 LHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 999999999999999999 678999999999975
No 477
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=1.8e-14 Score=153.68 Aligned_cols=160 Identities=21% Similarity=0.265 Sum_probs=94.8
Q ss_pred EeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCC
Q 000880 429 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 508 (1239)
Q Consensus 429 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~ 508 (1239)
.+.||+|+||+||+|.+. +|+.||||+++............. +...+....|++...+...+........ ..+...
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~l--~~l~~~ 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYR-TGDYRFGRKKSNWRYLSRLWAEKEFRNL--KRLYEA 77 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhh-HHHHHhccCCcchhhhhhHHHHHHHHHH--HHHHHc
Confidence 367999999999999987 899999999875433221111111 0123333334443332222111000000 000000
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccCC-CHH-HHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccc
Q 000880 509 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR-QVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIH 585 (1239)
Q Consensus 509 g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~-~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs-~gIiH 585 (1239)
+.. +. .. ......+++|||+++ ++. ..+.... . ...+..++.+++.++.++|. +||+|
T Consensus 78 ~~~--------------~~-~~--~~~~~~~lv~e~~~g~~~~~~~l~~~~-~-~~~~~~~~~~~~~~l~~lh~~~~ivH 138 (187)
T cd05119 78 GVP--------------VP-KP--IDLNRHVLVMEFIGGDGIPAPRLKDVR-L-LEDPEELYDQILELMRKLYREAGLVH 138 (187)
T ss_pred CCC--------------CC-ce--EecCCCEEEEEEeCCCCccChhhhhhh-h-cccHHHHHHHHHHHHHHHhhccCcCc
Confidence 000 00 00 001124899999976 221 1222111 1 16678999999999999999 99999
Q ss_pred cCCCcccEEEcCCCCEEEeecCcchhc
Q 000880 586 RDLTPNNIFFDARNDIKIGDFGLAKFL 612 (1239)
Q Consensus 586 rDLKp~NILl~~~~~vKL~DFGlA~~~ 612 (1239)
|||||+||+++ ++.++|+|||.+...
T Consensus 139 ~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 139 GDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CCCChhhEEEE-CCcEEEEECcccccc
Confidence 99999999999 899999999999754
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=1.1e-14 Score=172.44 Aligned_cols=260 Identities=25% Similarity=0.350 Sum_probs=191.6
Q ss_pred CCceEEeeecc--CCceEEEEEEE--ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecCcc
Q 000880 424 NDFEELQPLGH--GGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 498 (1239)
Q Consensus 424 ~~y~~~~~LG~--G~fG~Vy~a~~--~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~~~ 498 (1239)
..|.....+|. |.+|.||.++. ..++..+|+|.-+...........-++|+...+++ .|+|.++.+..|.+
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~---- 189 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG---- 189 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc----
Confidence 34445577888 99999999999 88999999998544433323334456777777777 69999997766632
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCCCHHHHHHhcCC-CCHHHHHHHHHHHHH----
Q 000880 499 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVE---- 573 (1239)
Q Consensus 499 ~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~~~~~~~i~~qI~~---- 573 (1239)
...+|+.+|+|+.+|..+.+.... ++...++..+.+...
T Consensus 190 ------------------------------------~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~ 233 (524)
T KOG0601|consen 190 ------------------------------------SGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVT 233 (524)
T ss_pred ------------------------------------CCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccc
Confidence 456799999999999988876655 889999999999999
Q ss_pred HHHHHHhCCccccCCCcccEEEcCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 000880 574 GLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 652 (1239)
Q Consensus 574 gL~yLHs~gIiHrDLKp~NILl~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 652 (1239)
||.++|+.+++|-|+||.||++..+ ..++++|||+...+........ ........|...|++||.+++
T Consensus 234 al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~----------~~~~~r~~~~~~Y~~ke~~~~- 302 (524)
T KOG0601|consen 234 ALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSV----------FKVSKRPEGDCIYAAKELLNG- 302 (524)
T ss_pred cccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccc----------eeeeecCCCCceEeChhhhcc-
Confidence 9999999999999999999999999 8899999999987654432211 111122367888999999987
Q ss_pred CCCCcchhhHHHHHHHHHhhcCCchhHHHH-HHHHhhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 000880 653 PKIDEKADMYSLGIVFFELWHPFSTAMERQ-IVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDA 730 (1239)
Q Consensus 653 ~~~~~ksDIwSlGviL~ELltPf~~~~~~~-~~~~~~~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 730 (1239)
.++.+.|+||+|.++.+..+.+....... .....+ ....+|..+ ...+.++...+..|++.+|..|+++..++.+.
T Consensus 303 -l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~ 380 (524)
T KOG0601|consen 303 -LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALN 380 (524)
T ss_pred -ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc-ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccc
Confidence 58999999999999988764111100000 000001 122233332 24455677799999999999999999999998
Q ss_pred CCCCch
Q 000880 731 LPPQME 736 (1239)
Q Consensus 731 ~~~~~~ 736 (1239)
+.+.+.
T Consensus 381 ~i~s~~ 386 (524)
T KOG0601|consen 381 VIHSKL 386 (524)
T ss_pred cccchh
Confidence 777443
No 479
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.47 E-value=4.7e-13 Score=148.63 Aligned_cols=139 Identities=19% Similarity=0.246 Sum_probs=104.1
Q ss_pred eeec-cCCceEEEEEEEccCCcEEEEEEEecCCC-----------CchhHHHHHHHHHHHHhcCCCce--eeeeeeeeec
Q 000880 430 QPLG-HGGFGHVVLCKNKLDGRHYAVKKIRLKDK-----------SLPVNDRILREVATLSRLQHQHV--VRYYQAWFET 495 (1239)
Q Consensus 430 ~~LG-~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-----------~~~~~~~~~~Ev~iL~~L~HpnI--v~l~~~~~e~ 495 (1239)
..|| .||.|+||++... +..+|||.+..... +.....++.+|+.++..|.|++| +..++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4687 8899999988775 78899998854221 11223568899999999999885 5555443211
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC--CHHHHHHhcCCCCHHHHHHHHHHHHH
Q 000880 496 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVE 573 (1239)
Q Consensus 496 ~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g--sL~~~l~~~~~l~~~~~~~i~~qI~~ 573 (1239)
. ......++|||+++| +|.+++.. ..+++.. +.||+.
T Consensus 115 ~------------------------------------~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~ 153 (239)
T PRK01723 115 H------------------------------------GLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQ 153 (239)
T ss_pred c------------------------------------CcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHH
Confidence 0 001224699999975 78888764 3455543 578999
Q ss_pred HHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchh
Q 000880 574 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 611 (1239)
Q Consensus 574 gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~ 611 (1239)
+|.+||++||+||||||.|||++.++.++|+|||.+..
T Consensus 154 ~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 154 LIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 99999999999999999999999989999999999875
No 480
>TIGR02367 PylS pyrrolysyl-tRNA synthetase. PylS is the archaeal enzyme responsible for charging the pyrrolysine tRNA, PylT, by ligating a free molecule of pyrrolysine. Pyrrolysine is encoded at an in-frame UAG (amber) at least in several corrinoid-dependent methyltransferases of the archaeal genera Methanosarcina and Methanococcoides, such as trimethylamine methyltransferase.
Probab=99.46 E-value=3.2e-13 Score=155.92 Aligned_cols=123 Identities=11% Similarity=0.155 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHcCCcccccccee---c---cCC--CccccccEEEEeccCCCeeeecCCCcHHHHHHHHhCC---C
Q 000880 797 LRDYVVQVTKEMFRQHCAKHLEIEPMY---L---LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ---K 865 (1239)
Q Consensus 797 ~~~~i~~~i~~~f~~~Gy~~I~tP~~~---~---~~~--~~~~~~~~~~~~D~~G~~l~LRPD~T~~iaR~~~~~~---~ 865 (1239)
-.+.+++.++++|..+||++|.||+|. + ++. +....++||++. +.++||||+|++++|+++.+. .
T Consensus 241 ~~~~Led~IRevfvg~GFqEV~TPtLt~eE~~E~m~~~~g~eI~n~Iyk~e----e~lvLRPdLTPsLaR~La~N~~~l~ 316 (453)
T TIGR02367 241 YLGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRVD----KNFCLRPMLAPNLYNYLRKLDRALP 316 (453)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCeecchHHHHhhcCccCCcccccceEec----CceEecccCHHHHHHHHHHhhhhcc
Confidence 357899999999999999999999992 2 122 344677999873 368999999999999988743 4
Q ss_pred CceeEEeecCeEEcCCCCCC-CCceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEE
Q 000880 866 SSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 927 (1239)
Q Consensus 866 ~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i 927 (1239)
.|+|+||+|+|||+|.++.+ .+||+|+|++++|.....+|+| .++.++|+.||+. +.+
T Consensus 317 ~PqKIFEIGkVFR~E~~~~thlREF~QL~~eIaG~~atfaDle--alL~e~Lr~LGId--fei 375 (453)
T TIGR02367 317 DPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLE--AIIKDFLDHLEID--FEI 375 (453)
T ss_pred CCeeEEEEcCeEecCCCCCCCcCeEEEEEEEEECCCCCHHHHH--HHHHHHHHHCCCc--eEE
Confidence 59999999999999876654 4589999999999998888777 5999999999983 666
No 481
>PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes. seryl tRNA synthetase structure; InterPro: IPR002314 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain includes the glycine, histidine, proline, threonine and serine tRNA synthetases.; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3UH0_A 3UGT_C 3UGQ_A 1B76_B 1GGM_B 1ATI_A 1ADY_C 1ADJ_C 2I4O_A 2I4M_B ....
Probab=99.44 E-value=2.7e-13 Score=143.26 Aligned_cols=136 Identities=15% Similarity=0.185 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHH-HcCCccccccce----ec--cCCCccccccEEEEeccCCCeeeecCCCcHHHHHHHHh-----CC
Q 000880 797 LRDYVVQVTKEMFR-QHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAIS-----NQ 864 (1239)
Q Consensus 797 ~~~~i~~~i~~~f~-~~Gy~~I~tP~~----~~--~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~iaR~~~~-----~~ 864 (1239)
+++.|.+.+++.+. ++||++|.||+| .+ .++.....++||++.|.+++.++|||+.+.++++++.. ++
T Consensus 1 l~~~l~~~~~~~~~~~~G~~ev~~P~l~~~~~~~~sg~~~~~~~~~~~~~~~~~~~~~L~pt~~~~~~~~~~~~~~~~~~ 80 (173)
T PF00587_consen 1 LRNALERFIREEFVLKFGFQEVDTPILIPSEVWEKSGHWDNFSDEMFKVKDRGDEEYCLRPTSEPGIYSLFKNEIRSSYR 80 (173)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEB--SEEEHHHHHHHSHHHHHGGGSEEEEETTTEEEEE-SSSHHHHHHHHHHHEEBHGG
T ss_pred CHHHHHHHHHHHhHHhcCCEEEECCeEEehHHhhhccccccccCCeeeeeecccccEEeccccccceeeeecceeeeccc
Confidence 46789999999999 999999999999 22 23345567889999999999999999999999998877 23
Q ss_pred CCceeEEeecCeEEcC-CCC---CCCCceeEEeEEEeCCC--CcccHHHHHHHHHHHHHhcCCCCceEEEECcHH
Q 000880 865 KSSFKRYEISSVYRRA-IGH---SPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 933 (1239)
Q Consensus 865 ~~P~r~~Y~g~VfR~e-~~~---~~~~ef~Q~GvEiiG~~--s~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~ 933 (1239)
..|+|+|++|++||+| .+. .+.+||+|.++++||.+ ......+++.++.++++.||+.+ +.+.+++++
T Consensus 81 ~LP~~~~~~g~~fR~E~~~~~gl~R~reF~~~e~~~f~~~~~~~~~~~~~~~~~~~i~~~lgl~~-~~~~~~~~~ 154 (173)
T PF00587_consen 81 DLPLKLYQIGTCFRNEARPTRGLFRLREFTMDEMHIFCTPEQSEEEFEELLELYKEILEKLGLEP-YRIVLSSSG 154 (173)
T ss_dssp GSSEEEEEEEEEEBSSSSSBSTTTS-SEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTSGC-EEEEEEETC
T ss_pred cCCeEEeecccccccccccccccceeeEeeeeceEEEeCCcccHHHHHHHHHHHHHHHHHcCCce-EEEEEcCCC
Confidence 4699999999999998 444 34457999999999998 34677799999999999999953 999998854
No 482
>KOG2324 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.44 E-value=8.3e-13 Score=144.72 Aligned_cols=356 Identities=11% Similarity=0.119 Sum_probs=202.2
Q ss_pred cccccccCCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce------eccCCCccccccEEEEeccCCCeeee
Q 000880 775 AGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLEL 848 (1239)
Q Consensus 775 ~~~~~ld~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~~~~~~D~~G~~l~L 848 (1239)
-++++ +...|+.-++|...+..+++.+.+..-+..-|.+.|..|++ .-.+.++....+||+|.|+.|+.+||
T Consensus 34 ~GfI~--ps~~G~yq~LPlg~R~~~K~~~~l~~~mqs~Ga~kIslp~ls~~~LWekTgRw~~~gsEl~rl~Dr~gkq~cL 111 (457)
T KOG2324|consen 34 VGFIR--PSSPGLYQLLPLGLRVLNKLCRLLDNEMQSGGAQKISLPILSSKELWEKTGRWDAMGSELFRLHDRKGKQMCL 111 (457)
T ss_pred hCccc--cCCCCceeeccchHHHHHHHHHHHHHHHHhccCeeEeecccChHHHHHhcCcccccchhheEeeccCCCEecc
Confidence 34444 56789999999999999999999999999999999999999 33445777889999999999999999
Q ss_pred cCCCcHHHHHHHHh-----CCCCceeEEeecCeEEcC-CCCC---CCCceeEEeEEEeCCCCcccHHHHHHH--------
Q 000880 849 SHELRLPFIRWAIS-----NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKV-------- 911 (1239)
Q Consensus 849 RPD~T~~iaR~~~~-----~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~s~~aDaEvi~l-------- 911 (1239)
-|----.|.+.+++ ++..|+++|++|+-||+| +|+. |.|||+.-|. .+...|.|...-
T Consensus 112 ~pThEE~iT~lmat~~~lsykqlPi~vYQigrKfRDElrpRfGLlRgREFlMKDm-----YsFd~~~etA~qTy~~v~~a 186 (457)
T KOG2324|consen 112 TPTHEEDITALMATYIPLSYKQLPIRVYQIGRKFRDELRPRFGLLRGREFLMKDM-----YSFDSDEETAQQTYQLVDQA 186 (457)
T ss_pred CCchHHHHHHHHHhcCccccccCcEEeeeechhhhhccCccccchhhHHHHHhhh-----hcccCCHHHHHHHHHHHHHH
Confidence 99544455566665 445699999999999996 5664 3457999988 555555554333
Q ss_pred HHHHHHhcCCCCceEEEECcHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHHhcCCCHHHH
Q 000880 912 TMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVV 991 (1239)
Q Consensus 912 a~~~l~~lgi~~~~~i~lg~~~i~~~ll~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 991 (1239)
-..+++.||+. |.-.=.+.+.+.+- ++-+ +.-. .++.++..
T Consensus 187 Y~~iFkqL~~p--fVkv~AdsG~iGG~-----vShE--------fhl~------------------------~~vgED~l 227 (457)
T KOG2324|consen 187 YDRIFKQLGLP--FVKVWADSGDIGGE-----VSHE--------FHLI------------------------HPVGEDTL 227 (457)
T ss_pred HHHHHHHcCCC--eEEEeecccccCce-----eeee--------Eecc------------------------CccCccce
Confidence 33444444443 22211121111110 0000 0000 00001000
Q ss_pred HHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcccEEEccCCCCCCCccceeEEEEEecCCCCcccc
Q 000880 992 NRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATL 1071 (1239)
Q Consensus 992 ~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~l~l~~~~~~~~i~~Dl~~~rgl~YYtG~vFe~~~~~~~~~~~~ 1071 (1239)
..... +.+.++ .+.++.=+..-+ +.. .. =++.-+++.+ .|.+|-.
T Consensus 228 ~~C~~--C~~s~n-~e~~~~sk~~~C--p~C--------------~~---~~L~~~~~IE--VgHtF~L----------- 272 (457)
T KOG2324|consen 228 MSCPS--CGYSKN-SEDLDLSKIASC--PKC--------------NE---GRLTKTKSIE--VGHTFLL----------- 272 (457)
T ss_pred eecCc--CCccCc-hhhhcCCccccC--Ccc--------------cC---CCcccccceE--EEEEEEe-----------
Confidence 00000 000011 011110000000 000 00 0222222222 2333221
Q ss_pred cccccccccccccchhhhccccccccccCCCCCCceeeeeccHHHHHhhC----C--CCCcCCCCCCCceE-EEEecCCC
Q 000880 1072 VEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHY----P--VDFKPVRNEAGTSV-LVCSRGGG 1144 (1239)
Q Consensus 1072 ~~~~~i~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigldrl~~~L----~--~~~~~~~~~~~~~v-~v~~~~~~ 1144 (1239)
|--|..- ||.. ++..-|+.+-+-.-.++||+.||+.+. . .+..++...+|.+| +|.+.. .
T Consensus 273 --------G~kYS~~---lna~-f~~~~gKpe~l~MgCyGIGVtRllaAa~evls~~~~lrwP~~iAPy~vcli~pk~-~ 339 (457)
T KOG2324|consen 273 --------GTKYSKP---LNAK-FVNVEGKPEFLHMGCYGIGVTRLLAAAAEVLSDDKGLRWPSLIAPYKVCLIGPKK-G 339 (457)
T ss_pred --------ccccccc---cCce-eeeecCCcceEEecceeccHHHHHHHHHHHhccccccccccccCcceeEEeccCC-c
Confidence 2222211 1111 011122221112224589999997654 2 33344445678888 666653 4
Q ss_pred ccHHHHHHHHHHHHHcCC------eEEEeeCCCCCHHHHHHHHHhCCCcEEEEEc-CCcccCCeEEEEEccCCcccccch
Q 000880 1145 GLLVERMELVAELWEENI------KAQFVPVPDPSLTEQYEYASEHDIKCLVILT-DTGAQKGLVKVRHLDVKKEKEVQR 1217 (1239)
Q Consensus 1145 ~~~~~a~~ia~~Lr~~G~------~ve~~~~~~~~l~k~~~~A~~~g~~~~viig-~~E~~~~~v~vk~l~~~~q~~v~~ 1217 (1239)
.....+.+++.+|-.... .+-+.+.....++++++-|++.|+|++||+| ..-..+..+.|+-...|+...+..
T Consensus 340 ~~~q~~~ev~~el~~~~~~~~l~~~iLlddr~~ltiG~Ri~dA~~lG~PfviVvg~s~~~~~~~~EV~~~~~ge~~~l~~ 419 (457)
T KOG2324|consen 340 SKSQRAQEVISELLNDEAVGNLHGEILLDDREELTIGKRIKDANRLGIPFVIVVGNSASWDNPEIEVRTIRWGESAELDK 419 (457)
T ss_pred chhhhHHHHHHHhhcchhhhhhccceeccchhhhhhHHhhhhHHhcCCCEEEEEcccccCCCceEEEEEeecCceeccch
Confidence 555666777776544211 1222333335789999999999999999999 455567899999999998888777
Q ss_pred HHHHHHH
Q 000880 1218 ESLVRFL 1224 (1239)
Q Consensus 1218 ~el~~~i 1224 (1239)
+.+.+.+
T Consensus 420 ~~~~~l~ 426 (457)
T KOG2324|consen 420 DGFMKLL 426 (457)
T ss_pred hhHHHHh
Confidence 7665544
No 483
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.42 E-value=1.7e-13 Score=168.94 Aligned_cols=281 Identities=22% Similarity=0.252 Sum_probs=204.3
Q ss_pred ccCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCch-hHHHHHHHHHHHHhcCCCceeeeeeeeeecCcccc
Q 000880 422 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 500 (1239)
Q Consensus 422 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~ 500 (1239)
..+++.+.+-+-+|.++.++.++-..+|...++|+......-.. ..+....+-.++-...||-++...-.
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s--------- 872 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS--------- 872 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC---------
Confidence 46788899999999999999999888888888886643221110 11222222222222233444432211
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000880 501 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 579 (1239)
Q Consensus 501 ~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLH 579 (1239)
| .....++++|+|.+ ++|...++..+..+.+-++.++..+..+++|||
T Consensus 873 ---------------~----------------~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~ 921 (1205)
T KOG0606|consen 873 ---------------F----------------PCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLH 921 (1205)
T ss_pred ---------------C----------------CCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccc
Confidence 0 12456799999996 589999999888999999999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCCEEEeecCcchhccccccccCC----------CCC--CCCC----CccccCcccccCccC
Q 000880 580 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA----------AFP--TDTG----GVSVDGTGQVGTYFY 643 (1239)
Q Consensus 580 s~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~~~~~~~~~~----------~~~--~~~~----~~~~~~~~~~GT~~Y 643 (1239)
+..+.|||++|.|+|+..+++.+++|||.......-...... .+. .... .........+||+.|
T Consensus 922 s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~ 1001 (1205)
T KOG0606|consen 922 SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDY 1001 (1205)
T ss_pred cchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcc
Confidence 999999999999999999999999999955433211000000 000 0000 011223456899999
Q ss_pred CCcccccCCCCCCcchhhHHHHHHHHHhhc---CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 000880 644 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 720 (1239)
Q Consensus 644 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 720 (1239)
.+||.+.+ ......+|+|++|++++|.++ ||.......++..++......|......++++++++.+++..+|.+|
T Consensus 1002 laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr 1080 (1205)
T KOG0606|consen 1002 LAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQR 1080 (1205)
T ss_pred cCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhc
Confidence 99999998 567889999999999999996 78777777777666655555565666677899999999999999999
Q ss_pred CCHH---HHHhccCCCCchHHHHHHH
Q 000880 721 PSAT---ELLQDALPPQMEYELLDNI 743 (1239)
Q Consensus 721 Pta~---eiL~~~~~~~~~~~~~~~~ 743 (1239)
..+. ++-.|+||+...|+.+..-
T Consensus 1081 ~~a~~~~e~k~~~~~~~~~~~~l~~q 1106 (1205)
T KOG0606|consen 1081 LGAKGAAEVKGHPFFQDVDWENLALQ 1106 (1205)
T ss_pred cCcccccccccCCccCCCCccccccc
Confidence 9887 8899999999998877553
No 484
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.39 E-value=1.5e-12 Score=132.24 Aligned_cols=131 Identities=28% Similarity=0.328 Sum_probs=105.1
Q ss_pred EEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC--CceeeeeeeeeecCccccCCCCc
Q 000880 428 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVVRYYQAWFETGVADFDGDSM 505 (1239)
Q Consensus 428 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H--pnIv~l~~~~~e~~~~~~~~~~~ 505 (1239)
+++.||.|.++.||++... +..+++|....... ...+.+|+..++.++| +++++++....
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~------------ 63 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGE------------ 63 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcC------------
Confidence 3578999999999999986 47899998764322 4568899999999976 47887775531
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 000880 506 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--- 581 (1239)
Q Consensus 506 ~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~~~~~~~i~~qI~~gL~yLHs~--- 581 (1239)
.....|++|||+++ .+..+ +......++.+++.+|++||..
T Consensus 64 ----------------------------~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~ 108 (155)
T cd05120 64 ----------------------------SDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLL 108 (155)
T ss_pred ----------------------------CCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCce
Confidence 12457999999976 44332 4566677889999999999985
Q ss_pred CccccCCCcccEEEcCCCCEEEeecCcchh
Q 000880 582 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 611 (1239)
Q Consensus 582 gIiHrDLKp~NILl~~~~~vKL~DFGlA~~ 611 (1239)
+++|+||+|.|||++..+.+++.|||.++.
T Consensus 109 ~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 109 VLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEecCCCcceEEEECCcEEEEEecccccC
Confidence 699999999999999989999999999875
No 485
>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional
Probab=99.36 E-value=2.3e-12 Score=157.12 Aligned_cols=140 Identities=10% Similarity=0.058 Sum_probs=113.9
Q ss_pred ccCCCCcccccchhhhhHHHHHHHHHHHHHHHcCCcccccccee---------cc----------C----CC-c--cc--
Q 000880 780 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMY---------LL----------G----DC-P--QF-- 831 (1239)
Q Consensus 780 ld~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~~---------~~----------~----~~-~--~~-- 831 (1239)
.|-...| +|++|.+...+.++.+.++++|..+||++|.||.|+ +. . +. . ..
T Consensus 218 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~Gf~e~~~p~vE~~~~nfd~lf~p~~hpaR~~~dtf~~~~~~~~~~~~ 296 (489)
T PRK04172 218 YNVKAPP-PKIYPGKKHPYREFIDEVRDILVEMGFEEMKGPLVETEFWNFDALFQPQDHPAREMQDTFYLKYPGIGDLPE 296 (489)
T ss_pred ceeCCCC-CCCCCCCCChHHHHHHHHHHHHHHCCCEEeeCCeeeecCcccccccCCCCCCCCCccceEEECCcccccCcH
Confidence 3344455 889999999999999999999999999999999993 11 0 00 0 00
Q ss_pred ------------------cccEEEEeccCCCeeeecCCCcHHHHHHHHhCCCCceeEEeecCeEEcCCCCCC-CCceeEE
Q 000880 832 ------------------KRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSP-PNRYLQG 892 (1239)
Q Consensus 832 ------------------~~~~~~~~D~~G~~l~LRPD~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~ 892 (1239)
..=+|.|.++.++.++|||++|++++|+++++...|+|+|++|+|||++.++.+ .+||+|+
T Consensus 297 ~~~~~v~~~he~g~~~~~~~~~y~~~~~~~~~~~LR~~~T~~~~r~l~~~~~~p~rlFeiGrVFR~e~~d~~~l~Ef~ql 376 (489)
T PRK04172 297 ELVERVKEVHEHGGDTGSRGWGYKWDEDIAKRLVLRTHTTALSARYLASRPEPPQKYFSIGRVFRPDTIDATHLPEFYQL 376 (489)
T ss_pred HHHHHHHHHHhccCCCCCccccCCcchhhhhccccccCChHHHHHHHHhcCCCCeEEEEecceEcCCCCCcccCCchheE
Confidence 001577777778999999999999999999887789999999999999876644 4689999
Q ss_pred eEEEeCCCCcccHHHHHHHHHHHHHhcCCC
Q 000880 893 DFDIIGGASALTEAEVLKVTMDIVTRFFHA 922 (1239)
Q Consensus 893 GvEiiG~~s~~aDaEvi~la~~~l~~lgi~ 922 (1239)
++.++|.. ...++++.++.+++..+|+.
T Consensus 377 ~~~i~G~~--~~f~elkg~l~~ll~~lGi~ 404 (489)
T PRK04172 377 EGIVMGED--VSFRDLLGILKEFYKRLGFE 404 (489)
T ss_pred EEEEEeCC--CCHHHHHHHHHHHHHHhCCc
Confidence 99999974 34789999999999999885
No 486
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.36 E-value=7.2e-12 Score=149.13 Aligned_cols=407 Identities=13% Similarity=0.111 Sum_probs=235.5
Q ss_pred ccccccccCCCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce---ec---cCCCccccccEEEEeccCCCeee
Q 000880 774 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM---YL---LGDCPQFKRNTVKLLTHGGDLLE 847 (1239)
Q Consensus 774 ~~~~~~ld~d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~---~~---~~~~~~~~~~~~~~~D~~G~~l~ 847 (1239)
.++.++ +..+|+..|+|...++++.|++.+++.+++.|.+++..|+| .+ .++++....+||+++|++++.++
T Consensus 28 rAg~i~--~~~~G~y~~lP~g~rv~~kI~~iir~em~~~G~~Evl~P~L~p~eLwkEs~r~~~f~~El~~v~drg~~~l~ 105 (500)
T COG0442 28 RAGMIR--KPVKGLYVWLPLGLRVLEKIENIIREEMDKIGAQEVLFPTLIPAELWKESGRWEGFGPELFRVKDRGDRPLA 105 (500)
T ss_pred hcCcee--cccCceEEECccHHHHHHHHHHHHHHHHHhcCceEEechhcCHHHHHHHhChhhhcchhhEEEEccCCceee
Confidence 445555 37899999999999999999999999999999999999999 22 33467788999999999999999
Q ss_pred ecCC----CcHHHHHHHHhCCCCceeEEeecCeEEcCC-CC---CCCCceeEEeEEEeCCCCcccHHH---HHHHHHHHH
Q 000880 848 LSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRAI-GH---SPPNRYLQGDFDIIGGASALTEAE---VLKVTMDIV 916 (1239)
Q Consensus 848 LRPD----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~-~~---~~~~ef~Q~GvEiiG~~s~~aDaE---vi~la~~~l 916 (1239)
|||- +|.=+..++.+++..|+++|+++++||+|. |. .|.|||+--++.-|=.+...++.+ ++.+-.+++
T Consensus 106 L~PTsEe~it~~~~~~i~SYkdLPl~lYQi~~kfRdE~rpr~gllR~REF~mkdaySfh~~~e~a~~~y~~~~~~Y~~if 185 (500)
T COG0442 106 LRPTSEEVITDMFRKWIRSYKDLPLKLYQIQSKFRDEKRPRFGLLRGREFLMKDAYSFHADEEDAEETYEKMLDAYSRIF 185 (500)
T ss_pred eCCCcHHHHHHHHHHHhhhhhhCCcceeeeeeEEeccccCCCCccchheeeecccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 9994 344444578789999999999999999964 44 356689988887776665566664 455567788
Q ss_pred HhcCCCCceEEEECcHHHHHHHHH-------------HcCCCHHHHHHHHHHHHhhcCCCCCcccccchHHHHHHHHHH-
Q 000880 917 TRFFHAESCDIHLNHGDLLEAIWS-------------WAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQ- 982 (1239)
Q Consensus 917 ~~lgi~~~~~i~lg~~~i~~~ll~-------------~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~l~~- 982 (1239)
.++|+. +....-+.++..+-.. .++.+..--..+-.++ . + ....... . ...+...
T Consensus 186 ~~i~l~--~~~~~ad~g~~Gg~~S~eF~~l~pd~ge~qi~ts~~y~aN~e~a~-~-~-~~~~~~~-~-----~~~~~v~t 254 (500)
T COG0442 186 LRLPLI--FGPVPADEGFIGGSYSHEFEALMPDGGEDQIATSHHYGANFEKAF-I-D-IKFEDEE-E-----GELEYVHT 254 (500)
T ss_pred HhCCce--EEeecccCCCCCCccceEEEEEccCCCccEEEEecchHHhHHHhc-c-C-CCccccc-c-----ccceEecc
Confidence 888874 5555544333321110 0011111111111111 0 0 0000000 0 0000000
Q ss_pred -hcCCCHHHHHHHHHHHHHhcCC-------hhhHHHHHhc---cCCCChh---HHHHHHHH--HHHHccCcccEEEc-cC
Q 000880 983 -ELNLAEAVVNRLQTVGLRFCGA-------ADQALPRLRG---ALPADKP---TRKALDEL--YLRIWRIEKNIYID-AL 1045 (1239)
Q Consensus 983 -~~~l~~~~~~~l~~l~~~~~g~-------~~~~l~~l~~---~~~~~~~---~~~~l~~l--~l~~~~~~~~i~~D-l~ 1045 (1239)
..+++... +..++ .+.|+ +.-+-.++.. ....+.. ..+.-.++ .+.. +...+..| .+
T Consensus 255 ~s~~~s~r~---~~~~i-~i~GDn~G~v~Pp~vA~~qV~~~~~~~~ga~~h~~~~~~~rd~~~~l~~--~~~~~~~D~~~ 328 (500)
T COG0442 255 TSYGISTRI---IGAAI-LIHGDNEGLVLPPIVADIQVVIVPIFIKGANEHYKVVNYGRDVAEPLEK--LGIRVEGDDRS 328 (500)
T ss_pred cceEEEeee---eeEEE-EEecCCCCccCCchhccceEEEEeccccCcchhhhhhhhhhhhhhhhhh--cceEEeccccC
Confidence 01111111 11111 12222 1000000000 0001100 11111111 1222 22245556 32
Q ss_pred -CCCCCCcc------ceeEEEEEecCCCCcccccccccccccccccchhhhccccccccccCCCCCCceeeeeccHHHH-
Q 000880 1046 -MPPIESYH------RNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETI- 1117 (1239)
Q Consensus 1046 -~~rgl~YY------tG~vFe~~~~~~~~~~~~~~~~~i~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigldrl- 1117 (1239)
...|.-|| .|++|++ |=||-.-.. .. +...-|...+.-.+-+++|++|+
T Consensus 329 ~~~~G~kl~~~e~ieVghif~l-------------------G~kyse~~~---a~-v~~r~g~~~~~~mg~ygigvsr~v 385 (500)
T COG0442 329 PDGPGFKLNIWEGIEVGHIFEL-------------------GTKYSEAMN---AT-VLDRDGKEQPKTMGCYGIGVSRLV 385 (500)
T ss_pred CCCCCceeeeeeccccCEEEEE-------------------CchhhhhCe---eE-EEecCCCccceEEEehhhhhhhHH
Confidence 22232222 3455555 444532211 00 01222333323455568999995
Q ss_pred HhhCC-----CCCcCCCCCCCceEEEEecCCCc--cHHHHHHHHHHHHHcC-CeEEEeeCCCCCHHHHHHHHHhCCCcEE
Q 000880 1118 IQHYP-----VDFKPVRNEAGTSVLVCSRGGGG--LLVERMELVAELWEEN-IKAQFVPVPDPSLTEQYEYASEHDIKCL 1189 (1239)
Q Consensus 1118 ~~~L~-----~~~~~~~~~~~~~v~v~~~~~~~--~~~~a~~ia~~Lr~~G-~~ve~~~~~~~~l~k~~~~A~~~g~~~~ 1189 (1239)
.++++ .+..+....++.++.|+..+..+ ....|-++...|..+| ..|.+... +...+-.+.-|+-.|+|+.
T Consensus 386 ~a~ieq~~d~~gi~w~~a~apf~~~iv~~n~~~~~~~~~~~~~~~~l~~~G~~e~~~ddr-~er~g~k~~~a~liGiP~~ 464 (500)
T COG0442 386 AALLEQIHDENGIIWPKAIAPFDVHIVPVNTKDFKQAEAAEKLYVELPWCGTVEVLLDDR-DERPGVKFADADLIGIPLR 464 (500)
T ss_pred HHHHHHhcccccCccccccCcceeEEEEcCchhHHHHHHhhhHHHHHHhCCchhhhhhhh-ccccCccccCCeEecccce
Confidence 45554 23333335678888888875321 2233445677888899 88876655 5567777888999999999
Q ss_pred EEEcCCcccCCeEEEEEccCCcccccchHHHHHHH
Q 000880 1190 VILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1224 (1239)
Q Consensus 1190 viig~~E~~~~~v~vk~l~~~~q~~v~~~el~~~i 1224 (1239)
+++|.+ .+.|.|.+|...+|+...++...+...+
T Consensus 465 ~~~g~~-~~~g~~e~k~r~~ge~~~~~~~~l~~~~ 498 (500)
T COG0442 465 IVVGKR-LAEGEVEVKCRKCGEKEAVTIEALFARL 498 (500)
T ss_pred eeeccc-ccCCceeEEecCCCchhhccHHHHHHHh
Confidence 999988 8889999999999999988877776654
No 487
>cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from archaea, the cytoplasm of eukaryotes and some bacteria.
Probab=99.33 E-value=1.6e-12 Score=146.12 Aligned_cols=139 Identities=10% Similarity=0.138 Sum_probs=113.0
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHHcCCccccccce----ecc---CCCccccccEEEEeccCCC----eeeecCC
Q 000880 783 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHGGD----LLELSHE 851 (1239)
Q Consensus 783 d~~G~~D~lp~ea~~~~~i~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~~~~~~D~~G~----~l~LRPD 851 (1239)
.+.|+.+++|..+.+.+.|++.+++.+.++||++|.||.+ .+. ++.+...++||++.|.+++ .++|||+
T Consensus 20 ~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~sg~~~~f~~~~f~~~~~~~~~~~~~~~L~Pt 99 (261)
T cd00778 20 PVKGCMVFRPYGYAIWENIQKILDKEIKETGHENVYFPLLIPESELEKEKEHIEGFAPEVAWVTHGGLEELEEPLALRPT 99 (261)
T ss_pred CCCCeEEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhhhcchhhcCcceEEEEecCCcccCCcEEEcCC
Confidence 3679999999999999999999999999999999999999 222 2244558899999997754 7999999
Q ss_pred ----CcHHHHHHHHhCCCCceeEEeecCeEEcCCCC----CCCCceeEEeEEE-eCCCCcccHH---HHHHHHHHHHHhc
Q 000880 852 ----LRLPFIRWAISNQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDI-IGGASALTEA---EVLKVTMDIVTRF 919 (1239)
Q Consensus 852 ----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEi-iG~~s~~aDa---Evi~la~~~l~~l 919 (1239)
+|..+++.+.+++..|+|+|++|+|||+|.++ .|.+||+|.++.. +...+. ++. +++.+..++++.|
T Consensus 100 ~e~~~~~~~~~~i~s~r~LPlr~~~~~~~fR~E~~~~~Gl~R~reF~~~d~h~~~~~~e~-~~~~~~~~~~~~~~i~~~l 178 (261)
T cd00778 100 SETAIYPMFSKWIRSYRDLPLKINQWVNVFRWETKTTRPFLRTREFLWQEGHTAHATEEE-AEEEVLQILDLYKEFYEDL 178 (261)
T ss_pred CCHHHHHHHHhhccchhhcCHHHHhhhhhccCCCCCCCceeEeeeeeeeceeeccCCHHH-HHHHHHHHHHHHHHHHHHh
Confidence 77888888877777899999999999998654 2445799999975 554432 332 6678888888888
Q ss_pred -CCC
Q 000880 920 -FHA 922 (1239)
Q Consensus 920 -gi~ 922 (1239)
|++
T Consensus 179 lgl~ 182 (261)
T cd00778 179 LAIP 182 (261)
T ss_pred CCCe
Confidence 885
No 488
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=99.31 E-value=6.8e-12 Score=118.57 Aligned_cols=90 Identities=24% Similarity=0.419 Sum_probs=84.1
Q ss_pred eEEEEecCCC---ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCc
Q 000880 1135 SVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK 1211 (1239)
Q Consensus 1135 ~v~v~~~~~~---~~~~~a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~ 1211 (1239)
+|+|++.+ . +....|.++++.||+.|+++++.+. +.++++++++|++.|+||++++|++|.++|+|+||++.+++
T Consensus 1 qv~Ii~~~-~~~~~~~~~a~~l~~~L~~~gi~v~~d~~-~~~~~k~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~ 78 (94)
T PF03129_consen 1 QVVIIPVG-KKDEEIIEYAQELANKLRKAGIRVELDDS-DKSLGKQIKYADKLGIPFIIIIGEKELENGTVTVKDRDTGE 78 (94)
T ss_dssp SEEEEESS-CSHHHHHHHHHHHHHHHHHTTSEEEEESS-SSTHHHHHHHHHHTTESEEEEEEHHHHHTTEEEEEETTTTE
T ss_pred CEEEEEeC-CCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCchhHHHHHHhhcCCeEEEEECchhHhCCEEEEEECCCCc
Confidence 47888886 5 6788999999999999999998885 78999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHH
Q 000880 1212 EKEVQRESLVRFLLD 1226 (1239)
Q Consensus 1212 q~~v~~~el~~~i~~ 1226 (1239)
+.++++++|+++|++
T Consensus 79 ~~~v~~~el~~~l~~ 93 (94)
T PF03129_consen 79 QETVSLEELIEYLKE 93 (94)
T ss_dssp EEEEECCHHHHHHHH
T ss_pred EEEEEHHHHHHHHhh
Confidence 999999999999876
No 489
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=1.4e-12 Score=154.64 Aligned_cols=250 Identities=25% Similarity=0.265 Sum_probs=181.9
Q ss_pred CCcccCCceEEeeeccCCceEEEEEEEc-cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeecC
Q 000880 419 SSRYLNDFEELQPLGHGGFGHVVLCKNK-LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 496 (1239)
Q Consensus 419 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~-~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIv~l~~~~~e~~ 496 (1239)
.++++.+|.++..||.|.|+.|+.+... .++..|++|-+............-+.|+.+...+ .|.++++++..|.+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-- 337 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-- 337 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--
Confidence 5778899999999999999999988766 6789999998764444333334456788877777 69999999888843
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 000880 497 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 575 (1239)
Q Consensus 497 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~~~~~~~i~~qI~~gL 575 (1239)
....||..|||. +++...+.....+++...+++..|++.++
T Consensus 338 --------------------------------------~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 338 --------------------------------------LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred --------------------------------------cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 245579999995 55554444445588889999999999999
Q ss_pred HHHHhCCccccCCCcccEEEcCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCC-CcccccCCC
Q 000880 576 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT-APEIEQGWP 653 (1239)
Q Consensus 576 ~yLHs~gIiHrDLKp~NILl~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~-APE~l~~~~ 653 (1239)
.++|++.++|+|+||+||++..+ +..+++|||.+..+... ......+-+++ .+|++....
T Consensus 380 ~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~------------------~~~~~~~~r~~p~~~~~~e~~ 441 (524)
T KOG0601|consen 380 NVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS------------------SGVFHHIDRLYPIAEILLEDY 441 (524)
T ss_pred ccccchhhhcccccccceeeccchhhhhcccccccccccee------------------cccccccccccccchhhcccc
Confidence 99999999999999999999886 78899999998742111 11122333344 356555546
Q ss_pred CCCcchhhHHHHHHHHHhhc--CCchhHHHHHHHHhhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 000880 654 KIDEKADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 731 (1239)
Q Consensus 654 ~~~~ksDIwSlGviL~ELlt--Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 731 (1239)
.+..++|++|||..+.+..+ |+..... ....+ ..+..|... ....++..+.+.++.+++..||.+.++..|.-
T Consensus 442 ~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--~~~~i--~~~~~p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 442 PHLSKADIFSLGLSVDEAITGSPLSESGV--QSLTI--RSGDTPNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred ccccccccccccccccccccCcccCcccc--cceee--ecccccCCC-chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 68899999999999999886 3322211 11111 122222222 22257788999999999999999999987753
No 490
>KOG4445 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown]
Probab=99.28 E-value=3.6e-12 Score=136.05 Aligned_cols=106 Identities=20% Similarity=0.247 Sum_probs=87.9
Q ss_pred HHHHHhhhcCCceeeecC----CCCeEEEEEcCCCCCCCCCCCcEEEEEEEEcCCCCCCCCCccccccCCCCCHHHHHHH
Q 000880 37 EITALCAIFQEDCKVVSG----SPPQILVKLRPYSKDMGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNL 112 (1239)
Q Consensus 37 ElEaL~sIy~d~~~~~~~----~~~~~~i~i~~~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~~~~~~~~~l~~~~~~~l 112 (1239)
|.+.+++||.|++.+... .+-++.+++-|-++++++.++ ++|+|+++.|++||.++|.+.+.+++||++.++..|
T Consensus 2 e~~~~e~~~ld~i~~~~~~~s~~~~~i~~t~hpit~eedesqy-vcvtl~m~vs~gYP~esPtvtl~nPRGl~d~~~~~i 80 (368)
T KOG4445|consen 2 ESADGEIEALDSIWDGVHVESKLEASIRYTKHPITSEEDESQY-VCVTLEMTVSEGYPAESPTVTLSNPRGLGDPEFREI 80 (368)
T ss_pred cccchhhHhhhhHhhccCCCCCChhhheeeeccccccccccee-EEEEEEEecCCCCCCcCCceEecCCCCCCcHHHHHH
Confidence 444555555555444332 233667777777766666666 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCceeeehHHHHHHHHHHhh
Q 000880 113 LCLLQDQANSNAREGRVMIFNLVEAAQEFLSEI 145 (1239)
Q Consensus 113 ~~~L~e~~~e~~~~G~~mif~lv~~lke~L~~~ 145 (1239)
+..+++++++|+ ||||||+||+.++|+|++.
T Consensus 81 ~~~~~~iikq~~--g~pii~~lie~~~e~LT~n 111 (368)
T KOG4445|consen 81 QRQIQEIIKQNS--GMPIICQLIEHCSEFLTEN 111 (368)
T ss_pred HHHHHHHHHhcC--CCchhHHHHHHHHHHcccC
Confidence 999999999999 9999999999999999973
No 491
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=99.24 E-value=3.4e-11 Score=113.65 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=81.8
Q ss_pred CceEEEEecCCC--ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCC
Q 000880 1133 GTSVLVCSRGGG--GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1210 (1239)
Q Consensus 1133 ~~~v~v~~~~~~--~~~~~a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~ 1210 (1239)
|.+|.|++.+.+ .....|++++..||+.|++|++++. .+++++++++|++.|+++++++|++|.++++|+||++.++
T Consensus 1 P~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~~-~~~l~k~i~~a~~~g~~~~iiiG~~e~~~~~v~vk~~~~~ 79 (94)
T cd00861 1 PFDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDDR-NERPGVKFADADLIGIPYRIVVGKKSAAEGIVEIKVRKTG 79 (94)
T ss_pred CeEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCCcccchhHHHhcCCCEEEEECCchhhCCEEEEEECCCC
Confidence 457888888521 4678999999999999999998877 5799999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHH
Q 000880 1211 KEKEVQRESLVRFL 1224 (1239)
Q Consensus 1211 ~q~~v~~~el~~~i 1224 (1239)
++..++++++.+.+
T Consensus 80 ~~~~~~~~~~~~~l 93 (94)
T cd00861 80 EKEEISIDELLEFL 93 (94)
T ss_pred cceEEeHHHHHHhh
Confidence 99999999987765
No 492
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=99.24 E-value=5.1e-11 Score=111.60 Aligned_cols=90 Identities=18% Similarity=0.194 Sum_probs=82.2
Q ss_pred CceEEEEecCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccCCcc
Q 000880 1133 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKE 1212 (1239)
Q Consensus 1133 ~~~v~v~~~~~~~~~~~a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~~~q 1212 (1239)
|.+|+|++.+ +.....|+++++.||+.|++|++++. .+++++++++|++.|+++++++|++|..+++++++||.++++
T Consensus 1 p~~v~ii~~~-~~~~~~a~~~~~~Lr~~g~~v~~d~~-~~~~~~~~~~a~~~g~~~~iiig~~e~~~~~v~lk~~~~~~~ 78 (91)
T cd00860 1 PVQVVVIPVT-DEHLDYAKEVAKKLSDAGIRVEVDLR-NEKLGKKIREAQLQKIPYILVVGDKEVETGTVSVRTRDGGDL 78 (91)
T ss_pred CeEEEEEeeC-chHHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcc
Confidence 4578888875 66789999999999999999998877 679999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHH
Q 000880 1213 KEVQRESLVRFL 1224 (1239)
Q Consensus 1213 ~~v~~~el~~~i 1224 (1239)
..++++++++.+
T Consensus 79 ~~~~~~~~~~~~ 90 (91)
T cd00860 79 GSMSLDEFIEKL 90 (91)
T ss_pred ceEcHHHHHHHh
Confidence 999999987655
No 493
>cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain. GlyRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=99.23 E-value=6.9e-11 Score=117.18 Aligned_cols=96 Identities=22% Similarity=0.207 Sum_probs=85.8
Q ss_pred CCCceEEEEecCC-CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccC
Q 000880 1131 EAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1209 (1239)
Q Consensus 1131 ~~~~~v~v~~~~~-~~~~~~a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~ 1209 (1239)
.++.+|+|++.+. +.....|++++..||+.|++|++.+. +++++++++|++.|+++++++|++|.++++|+||++.+
T Consensus 24 lap~~v~Ii~~~~~~~~~~~a~~la~~LR~~gi~v~~d~~--~sl~kqlk~A~k~g~~~~iiiG~~e~~~~~v~lk~l~~ 101 (121)
T cd00858 24 LAPIKVAVLPLVKRDELVEIAKEISEELRELGFSVKYDDS--GSIGRRYARQDEIGTPFCVTVDFDTLEDGTVTIRERDS 101 (121)
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHHHHHCCCEEEEeCC--CCHHHHHHHhHhcCCCEEEEECcCchhCCEEEEEECCC
Confidence 3578899998741 44678999999999999999998776 69999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHHHHHH
Q 000880 1210 KKEKEVQRESLVRFLLDAI 1228 (1239)
Q Consensus 1210 ~~q~~v~~~el~~~i~~~l 1228 (1239)
+++.+++++++.+.+..++
T Consensus 102 ~~~~~v~l~~l~~~l~~~~ 120 (121)
T cd00858 102 MRQVRVKIEELPSYLRELI 120 (121)
T ss_pred CceEEEEHHHHHHHHHHHh
Confidence 9999999999988887654
No 494
>PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed
Probab=99.21 E-value=5.3e-11 Score=138.63 Aligned_cols=123 Identities=11% Similarity=0.141 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHcCCcccccccee---c---cCC--CccccccEEEEeccCCCeeeecCCCcHHHHHHHHhC---CCC
Q 000880 798 RDYVVQVTKEMFRQHCAKHLEIEPMY---L---LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKS 866 (1239)
Q Consensus 798 ~~~i~~~i~~~f~~~Gy~~I~tP~~~---~---~~~--~~~~~~~~~~~~D~~G~~l~LRPD~T~~iaR~~~~~---~~~ 866 (1239)
...+++.++++|..+||.+|.||.|. . .+. +....+.||.+ ++.++|||++|++++|+++.+ ...
T Consensus 206 ~s~Le~aIR~~f~~~GF~EV~TPtLt~ee~~e~~g~~~g~~i~~~my~i----deel~LRpsLtPsLlr~la~n~k~~~~ 281 (417)
T PRK09537 206 LGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRV----DKNFCLRPMLAPGLYNYLRKLDRILPD 281 (417)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHHHhCCCCcccchhhheee----CCceEehhhhHHHHHHHHHhhhhcccC
Confidence 56899999999999999999999991 1 111 23445788876 247999999999999988764 345
Q ss_pred ceeEEeecCeEEcCCCCCC-CCceeEEeEEEeCCCCcccHHHHHHHHHHHHHhcCCCCceEEE
Q 000880 867 SFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 928 (1239)
Q Consensus 867 P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~s~~aDaEvi~la~~~l~~lgi~~~~~i~ 928 (1239)
|+|+||+|+|||++.++.+ .+||+|+|++++|.....+| +..++.++|+.||+. |++.
T Consensus 282 P~RIFEIG~VFR~E~~g~~hlrEf~Ql~~~iiGs~~~f~d--L~~lleeLL~~LGI~--f~i~ 340 (417)
T PRK09537 282 PIKIFEIGPCYRKESDGKEHLEEFTMVNFCQMGSGCTREN--LENIIDDFLKHLGID--YEII 340 (417)
T ss_pred CeeEEEEeceEecCCCCCCCcceEEEEEEEEeCCchHHHH--HHHHHHHHHHHCCCC--cEEe
Confidence 9999999999999876544 45799999999997766655 669999999999984 6665
No 495
>PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional
Probab=99.21 E-value=1e-10 Score=138.70 Aligned_cols=147 Identities=10% Similarity=0.049 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHcCCccccccc-e---------eccCCCc--cccccEEEEecc------------------------
Q 000880 798 RDYVVQVTKEMFRQHCAKHLEIEP-M---------YLLGDCP--QFKRNTVKLLTH------------------------ 841 (1239)
Q Consensus 798 ~~~i~~~i~~~f~~~Gy~~I~tP~-~---------~~~~~~~--~~~~~~~~~~D~------------------------ 841 (1239)
...+.+.++++|..-||+++.+|. + ++..... -.....|-+.++
T Consensus 231 l~~~~~~i~~if~~mGF~e~~~~~~ves~f~NFDaL~~PqdHPARd~~DTFyl~~~~~~~~~~~p~~~~~~Vk~~He~G~ 310 (494)
T PTZ00326 231 LLKVRREFREILLEMGFEEMPTNRYVESSFWNFDALFQPQQHPARDAQDTFFLSKPETSKVNDLDDDYVERVKKVHEVGG 310 (494)
T ss_pred HHHHHHHHHHHHHhCCCEEecCCCCccccchhhhhhcCCCCCCCCCcCceEEEcCccccccccCcHHHHHHHHHHhccCC
Confidence 457888999999999999998773 3 1211111 112445555431
Q ss_pred -------------CCCeeeecCCCcHHHHHHHHhCC-------C-CceeEEeecCeEEcCCCCCC-CCceeEEeEEEeCC
Q 000880 842 -------------GGDLLELSHELRLPFIRWAISNQ-------K-SSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGG 899 (1239)
Q Consensus 842 -------------~G~~l~LRPD~T~~iaR~~~~~~-------~-~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~ 899 (1239)
..+.++||+++|++.+|+++++. . .|+|+|++|+|||++.++.+ ..||+|+++.++|.
T Consensus 311 ~gS~Gw~y~W~~e~a~~~vLRtHtTa~~aR~l~~~~~~~~~~~~~~P~k~fsigrVfR~d~~DatH~~eFhQ~Eg~vi~~ 390 (494)
T PTZ00326 311 YGSIGWRYDWKLEEARKNILRTHTTAVSARMLYKLAQEYKKTGPFKPKKYFSIDRVFRNETLDATHLAEFHQVEGFVIDR 390 (494)
T ss_pred cCCcccccccccchhccccccCCCCHHHHHHHHhhccccccccCCCCceEEecCCEecCCCCCCCcCceeEEEEEEEEeC
Confidence 11478999999999999999852 2 39999999999999886654 45799999999997
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCC-ceE-----------------------EEECcHHHHH-HHHHHcCCCH
Q 000880 900 ASALTEAEVLKVTMDIVTRFFHAE-SCD-----------------------IHLNHGDLLE-AIWSWAGIKA 946 (1239)
Q Consensus 900 ~s~~aDaEvi~la~~~l~~lgi~~-~~~-----------------------i~lg~~~i~~-~ll~~lgl~~ 946 (1239)
.. ++++++.++.++++++|+.+ .|. |+|++.++++ .+++.+|+++
T Consensus 391 ~~--s~~~L~~~l~~f~~~lG~~~~RfrP~yfPfTEPS~Ev~v~~~~~gkWIEIgg~Gm~rpevL~~~Gi~~ 460 (494)
T PTZ00326 391 NL--TLGDLIGTIREFFRRIGITKLRFKPAFNPYTEPSMEIFGYHPGLKKWVEVGNSGIFRPEMLRPMGFPE 460 (494)
T ss_pred CC--CHHHHHHHHHHHHHhcCCCceEEecCCCCCCCCeeEEEEEecCCCcEEEEeCcCccCHHHHHhcCCCC
Confidence 75 78999999999999999853 265 8999999998 9999999964
No 496
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.16 E-value=1.2e-10 Score=140.37 Aligned_cols=72 Identities=26% Similarity=0.351 Sum_probs=55.9
Q ss_pred EEEEeeccCC-CHHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHhCCccccCCCcccEEEcCCCCEEEeecCcchhc
Q 000880 538 LYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVE-GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 612 (1239)
Q Consensus 538 l~iVmEy~~g-sL~~~l~~~-~~l~~~~~~~i~~qI~~-gL~yLHs~gIiHrDLKp~NILl~~~~~vKL~DFGlA~~~ 612 (1239)
-++||||++| +|.++.... ...+ ...++.+++. .+..+|..|++|+|+||.||+++.++.++|+|||++..+
T Consensus 233 ~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 233 RVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred ceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 4899999976 777665421 1222 2345556655 478899999999999999999999999999999999764
No 497
>cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only, and an additional C-terminal zinc-binding domain specific to this subfamily of aaRSs.
Probab=99.13 E-value=3.7e-10 Score=121.87 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=91.9
Q ss_pred CCCCceEEEEecCCCc------cHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEE
Q 000880 1130 NEAGTSVLVCSRGGGG------LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVK 1203 (1239)
Q Consensus 1130 ~~~~~~v~v~~~~~~~------~~~~a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~ 1203 (1239)
..+|.+|+|++.+ +. ...+|.++++.||+.|++|+++.....++++++++|+.+|+|++|+||++|+++|+|+
T Consensus 7 ~iAP~qVvIipi~-~~~~~~~~~~~~a~~i~~~Lr~~Girv~~D~r~~~s~g~K~~~ae~~GvP~~I~IG~~Ele~g~V~ 85 (202)
T cd00862 7 RVAPIQVVIVPIG-IKDEKREEVLEAADELAERLKAAGIRVHVDDRDNYTPGWKFNDWELKGVPLRIEIGPRDLEKNTVV 85 (202)
T ss_pred hhcCceEEEEEec-CCccchHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHhHHHHHHHhCCCCEEEEECcchhhCCEEE
Confidence 4578899999985 33 6789999999999999999998874339999999999999999999999999999999
Q ss_pred EEEccCCcccccchHHHHHHHHHHHHhhcc
Q 000880 1204 VRHLDVKKEKEVQRESLVRFLLDAIASQFR 1233 (1239)
Q Consensus 1204 vk~l~~~~q~~v~~~el~~~i~~~l~~~~~ 1233 (1239)
|+++.++++..++++++++.+...+..+.+
T Consensus 86 v~~Rd~~ek~~v~~~el~~~i~~ll~~i~~ 115 (202)
T cd00862 86 IVRRDTGEKKTVPLAELVEKVPELLDEIQE 115 (202)
T ss_pred EEEecCCcceEEEHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888776544
No 498
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.12 E-value=4.8e-11 Score=145.41 Aligned_cols=154 Identities=19% Similarity=0.298 Sum_probs=92.5
Q ss_pred cCCceEEeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC----------------------------c----hhHHHH
Q 000880 423 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----------------------------L----PVNDRI 470 (1239)
Q Consensus 423 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----------------------------~----~~~~~~ 470 (1239)
..+|+. +.||+|++|+||+|+.+.+|+.||||+++..-.. . +....+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456666 7899999999999999977999999999743100 0 111223
Q ss_pred HHHHHHHHhcCCCceeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeccCC-CH
Q 000880 471 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TL 549 (1239)
Q Consensus 471 ~~Ev~iL~~L~HpnIv~l~~~~~e~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL 549 (1239)
.+|+...+.. +|+.++...|..... -.....+| .....-+||||||.| .+
T Consensus 198 ~~ElD~~~Ea--~N~~~~~~~f~~~~~-v~VP~v~~--------------------------d~st~~VLvmE~i~G~~l 248 (537)
T PRK04750 198 HDELDLMREA--ANASQLRRNFEDSDM-LYVPEVYW--------------------------DYCSETVMVMERMYGIPV 248 (537)
T ss_pred HHhhCHHHHH--HHHHHHHHHccCCCC-eecceeec--------------------------ccCCCceEEEeeecCccH
Confidence 3333333322 233333322211000 00000000 012345799999976 67
Q ss_pred HHH--HHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC----CEEEeecCcchhcc
Q 000880 550 RQV--FESYD----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLK 613 (1239)
Q Consensus 550 ~~~--l~~~~----~l~~~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILl~~~~----~vKL~DFGlA~~~~ 613 (1239)
.++ +...+ .+.+..+..++.|| +..|++|+|+||.||+++.++ .+++.|||++..+.
T Consensus 249 ~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 249 SDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 653 33322 13333444444454 468999999999999999888 89999999998664
No 499
>cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. These enzymes are usually homodimers. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. The substrate specificity of this reaction is further determined by additional domains. Intererestingly, this domain is also found is asparagine synthase A (AsnA), in the accessory subunit of mitochondrial polymerase gamma and in the bacterial ATP phosphoribosyltransferase regulatory subunit HisZ.
Probab=99.12 E-value=4.4e-10 Score=122.21 Aligned_cols=130 Identities=13% Similarity=0.127 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHcCCccccccceec----cCCCccccccEEEEeccCCCeeeecCCCcHHHHHHHHhCC-CCceeEEe
Q 000880 798 RDYVVQVTKEMFRQHCAKHLEIEPMYL----LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-KSSFKRYE 872 (1239)
Q Consensus 798 ~~~i~~~i~~~f~~~Gy~~I~tP~~~~----~~~~~~~~~~~~~~~D~~G~~l~LRPD~T~~iaR~~~~~~-~~P~r~~Y 872 (1239)
++.+++.++++|..+||++|.||.|.. ...+.. .+.+..+.+..++..+|||++|+++++.++.|. ..|+|+||
T Consensus 2 ~~~~~~~~r~~l~~~Gf~Ev~t~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~LR~s~~~~l~~~~~~n~~~~~~~lfe 80 (211)
T cd00768 2 RSKIEQKLRRFMAELGFQEVETPIVEREPLLEKAGHE-PKDLLPVGAENEEDLYLRPTLEPGLVRLFVSHIRKLPLRLAE 80 (211)
T ss_pred HHHHHHHHHHHHHHcCCEEeEcceecHHHHHHHcCcc-HhheeeeecCCCCEEEECCCCcHHHHHHHHhhcccCCEEEEE
Confidence 567899999999999999999999922 111211 245666677788999999999999999988764 45999999
Q ss_pred ecCeEEcCCCCC---CCCceeEEeEEEeCCCCc--ccHHHHHHHHHHHHHhcCCCCceEEE
Q 000880 873 ISSVYRRAIGHS---PPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRFFHAESCDIH 928 (1239)
Q Consensus 873 ~g~VfR~e~~~~---~~~ef~Q~GvEiiG~~s~--~aDaEvi~la~~~l~~lgi~~~~~i~ 928 (1239)
+|+|||.+.... +.+||+|+|++++|.... ....+++.++.++++.+|+..++.+.
T Consensus 81 ig~vfr~e~~~~~~~~~~ef~~l~~~~~g~~~~~~~~~~~~~~~~~~~l~~lg~~~~~~~~ 141 (211)
T cd00768 81 IGPAFRNEGGRRGLRRVREFTQLEGEVFGEDGEEASEFEELIELTEELLRALGIKLDIVFV 141 (211)
T ss_pred EcceeecCCCccccccceeEEEcCEEEEcCCchhHHHHHHHHHHHHHHHHHcCCCcceEEE
Confidence 999999865432 345899999999997653 25779999999999999974224443
No 500
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=99.12 E-value=4.1e-10 Score=106.06 Aligned_cols=90 Identities=14% Similarity=0.233 Sum_probs=81.1
Q ss_pred CceEEEEecCCC---ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEccC
Q 000880 1133 GTSVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1209 (1239)
Q Consensus 1133 ~~~v~v~~~~~~---~~~~~a~~ia~~Lr~~G~~ve~~~~~~~~l~k~~~~A~~~g~~~~viig~~E~~~~~v~vk~l~~ 1209 (1239)
|.+++|++.+ + .....|+++++.||..|++|++.+. ..++++++++|++.|+++++++|++|+.+++|++|++.+
T Consensus 1 p~~v~ii~~~-~~~~~~~~~a~~~~~~Lr~~g~~v~~~~~-~~~~~k~~~~a~~~g~~~~iiig~~e~~~~~v~i~~~~~ 78 (94)
T cd00738 1 PIDVAIVPLT-DPRVEAREYAQKLLNALLANGIRVLYDDR-ERKIGKKFREADLRGVPFAVVVGEDELENGKVTVKSRDT 78 (94)
T ss_pred CeEEEEEECC-CCcHHHHHHHHHHHHHHHHCCCEEEecCC-CcCHhHHHHHHHhCCCCEEEEECCChhhCCEEEEEECCC
Confidence 3578888875 5 6789999999999999999998776 579999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHH
Q 000880 1210 KKEKEVQRESLVRFL 1224 (1239)
Q Consensus 1210 ~~q~~v~~~el~~~i 1224 (1239)
+++..++++++.+.+
T Consensus 79 ~~~~~~~~~~~~~~i 93 (94)
T cd00738 79 GESETLHVDELPEFL 93 (94)
T ss_pred CceeEEEHHHHHhhc
Confidence 999999999887654
Done!