BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000881
(1239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14099|YERG_SCHPO Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC2F3.16 PE=4 SV=1
Length = 425
Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 171/307 (55%), Gaps = 9/307 (2%)
Query: 919 QNELEAEIRKVSRDSTLDPRRKAYLIQNLMTSRWIASQQKSLQARDSEISNGEDLFGCSP 978
Q+ + +I ++ S L +RKA L+Q ++ S ++ ++ + D + DL
Sbjct: 74 QDSVREKIHEIQSMSQLSEKRKALLMQKMLMSGYLKYRRTHKKESDENQLSSSDL---EK 130
Query: 979 SFRDAEKQVFGCEHYKRNCKLRAACCGKLFTCRFCHDKVSDHSMDRKATTEMMCMRCLKV 1038
++ D E+++ GC HY RNCK++ C + +TCR CH+ DH ++R A M+CM C KV
Sbjct: 131 TYYDKEQEILGCSHYMRNCKVQCFDCHEWYTCRHCHNDACDHVLERPAVENMLCMICSKV 190
Query: 1039 QPVGPVCTTLSCSGLSMAKYYCGICKFFDDE--RVVYHCPFCNLCRVGRGLGVDFFHCMT 1096
QP C C M +YYC CK +DD+ + YHC C +CR+GRGLG D+FHC T
Sbjct: 191 QPAAQYCKY--CKN-CMGRYYCNKCKLWDDDPNKSSYHCDDCGICRIGRGLGDDYFHCKT 247
Query: 1097 CNCCLAKKLVD-HKCREKGLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHY 1155
C CL + + H+C E+ + NCPIC +++F S V L C H +H C + Y ++Y
Sbjct: 248 CGLCLPISVFNTHRCIERSTDCNCPICGEYMFNSRERVIFLSCSHPLHQRCHEEYIRTNY 307
Query: 1156 ICPICSKSLGDMAVYFGMLDALLASEQLPEEYRDRCQEILCNDCDKKGSAPFHWLYHKCG 1215
CP C K++ ++ F +LD + + +P Y I CNDC+ + +H+L HKC
Sbjct: 308 RCPTCYKTIINVNSLFRILDMEIERQPMPYPYNTWISTIRCNDCNSRCDTKYHFLGHKCN 367
Query: 1216 FCGSYNT 1222
C SYNT
Sbjct: 368 SCHSYNT 374
>sp|Q96PM5|ZN363_HUMAN RING finger and CHY zinc finger domain-containing protein 1 OS=Homo
sapiens GN=RCHY1 PE=1 SV=1
Length = 261
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 134/240 (55%), Gaps = 6/240 (2%)
Query: 984 EKQVFGCEHYKRNCKLRAACCGKLFTCRFCHDKVSDHSMDRKATTEMMCMRCLKVQPVGP 1043
E+ GCEHY R C L+A CC KL+TCR CHD DH +DR E+ C+ C K+Q
Sbjct: 14 ERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQQ 73
Query: 1044 VCTTLSCSGLSMAKYYCGICKFFDDERVVYHCPFCNLCRVGRGLGVDFFHCMTCNCCLAK 1103
C CS L +YYC IC FD ++ YHC C +CR+G DFFHC+ CN CLA
Sbjct: 74 TCE--ECSTL-FGEYYCDICHLFDKDKKQYHCENCGICRIGPK--EDFFHCLKCNLCLAM 128
Query: 1104 KLVD-HKCREKGLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSK 1162
L HKC E NCPIC + + TS LPCGH +H C++ Y CP+C
Sbjct: 129 NLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMH 188
Query: 1163 SLGDMAVYFGMLDALLASEQLPEEYRDRCQEILCNDCDKKGSAPFHWLYHKCGFCGSYNT 1222
S DM Y+ LD +A +P EY++ +ILCNDC+ + + FH L KC C SYNT
Sbjct: 189 SALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKICESYNT 248
>sp|Q9CR50|ZN363_MOUSE RING finger and CHY zinc finger domain-containing protein 1 OS=Mus
musculus GN=Rchy1 PE=1 SV=1
Length = 261
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 134/245 (54%), Gaps = 6/245 (2%)
Query: 979 SFRDAEKQVFGCEHYKRNCKLRAACCGKLFTCRFCHDKVSDHSMDRKATTEMMCMRCLKV 1038
R+ + GCEHY R C L+A CC KL+TCR CHD DH +DR E+ C+ C K+
Sbjct: 9 GVRNLAQGPRGCEHYDRACLLKAPCCDKLYTCRLCHDTNEDHQLDRFKVKEVQCINCEKL 68
Query: 1039 QPVGPVCTTLSCSGLSMAKYYCGICKFFDDERVVYHCPFCNLCRVGRGLGVDFFHCMTCN 1098
Q C CS L +YYC IC FD ++ YHC C +CR+G DFFHC+ CN
Sbjct: 69 QHAQQTCE--DCSTL-FGEYYCSICHLFDKDKRQYHCESCGICRIGPK--EDFFHCLKCN 123
Query: 1099 CCLAKKLV-DHKCREKGLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYIC 1157
CL L HKC E NCPIC + + TS LPCGH +H C++ Y C
Sbjct: 124 LCLTTNLRGKHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRC 183
Query: 1158 PICSKSLGDMAVYFGMLDALLASEQLPEEYRDRCQEILCNDCDKKGSAPFHWLYHKCGFC 1217
P+C S DM Y+ LD +A +P EY++ +ILCNDC+ + + FH L KC C
Sbjct: 184 PLCMHSALDMTRYWRQLDTEVAQTPMPSEYQNVTVDILCNDCNGRSTVQFHILGMKCKLC 243
Query: 1218 GSYNT 1222
SYNT
Sbjct: 244 DSYNT 248
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 1114 GLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
G CP+C + +T +VR LPC H H+DC + H CP+C KSL
Sbjct: 223 GFGLECPVCKED-YTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 1114 GLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
GLE CP+C + +T +VR LPC H H+DC + H CP+C KSL
Sbjct: 224 GLE--CPVCKED-YTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1114 GLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
GLE CP+C + +T VR LPC H H+DC + H CP+C KSL
Sbjct: 225 GLE--CPVCKED-YTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1114 GLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
GLE CP+C + +T VR LPC HF HS C + H CP+C KSL
Sbjct: 226 GLE--CPVCKE-DYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1101 LAKKLVDHKCREKGLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPIC 1160
L V + + GLE CP+C + +T VR LPC HF HS C + H CP+C
Sbjct: 212 LPTVTVTQEQVDMGLE--CPVCKE-DYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVC 268
Query: 1161 SKSL 1164
KSL
Sbjct: 269 RKSL 272
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 1112 EKGLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSLGDMAVYF 1171
EK L+++C C + + T+R LPC H H +C + H CP+C D+ ++
Sbjct: 295 EKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKL---DVLKFY 351
Query: 1172 GMLDALLASEQLPEEYR 1188
G + L SE+ EY+
Sbjct: 352 GYV--FLGSEESILEYQ 366
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 1114 GLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
GLE CP+C D + VR LPC H H C + H CP+C KSL
Sbjct: 226 GLE--CPVCKDD-YALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 1114 GLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
GLE CP+C + + +VR LPC H H C + H CP+C KSL
Sbjct: 228 GLE--CPVCKED-YALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 1108 HKCREKGLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPIC 1160
H E G ET C +C D+ F + +R LPC H H DC + CP+C
Sbjct: 317 HSLPEPGTET-CAVCLDY-FCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLC 367
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 1114 GLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
GLE CP+C D + VR LPC H H C + H CP+C KSL
Sbjct: 229 GLE--CPVCKDD-YGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
>sp|A2VE78|FBXL5_BOVIN F-box/LRR-repeat protein 5 OS=Bos taurus GN=FBXL5 PE=2 SV=1
Length = 691
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 70 TNLGGGGDINKLLERYHFFRAIYKHHCNAEDEVIFPALDIRVKNIARTYSLEHEGESVLF 129
TN D LL+ + +K H E+E I L R + I +S E +
Sbjct: 32 TNFSNNNDFRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKLSEML-- 89
Query: 130 DQLFELLNSSMRNEE---SYRRELASCTGALQTSISQHMSKEEEQVFPLLIEKFSFEE 184
LFE +++NE +Y ++L A HM +EEE P+L+E F++EE
Sbjct: 90 -SLFEKGLKNVKNEYEQLNYAKQLKERLEAFTKDFLPHMKEEEEVFQPMLMEYFTYEE 146
>sp|Q8C2S5|FBXL5_MOUSE F-box/LRR-repeat protein 5 OS=Mus musculus GN=Fbxl5 PE=2 SV=2
Length = 690
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 70 TNLGGGGDINKLLERYHFFRAIYKHHCNAEDEVIFPALDIRVKNIARTYSLEHEGESVLF 129
TN D LL+ + +K H E+E I L R + I +S E +
Sbjct: 32 TNFSNNNDFRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKLSEML-- 89
Query: 130 DQLFELLNSSMRNEE---SYRRELASCTGALQTSISQHMSKEEEQVFPLLIEKFSFEE 184
LFE +++NE +Y ++L A HM +EEE P+L+E F++EE
Sbjct: 90 -SLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEYFTYEE 146
>sp|Q9UKA1|FBXL5_HUMAN F-box/LRR-repeat protein 5 OS=Homo sapiens GN=FBXL5 PE=1 SV=2
Length = 691
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 70 TNLGGGGDINKLLERYHFFRAIYKHHCNAEDEVIFPALDIRVKNIARTYSLEHEGESVLF 129
TN D LL+ + +K H E+E I L R + I +S E +
Sbjct: 32 TNFSNNNDFRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKLSEML-- 89
Query: 130 DQLFELLNSSMRNEE---SYRRELASCTGALQTSISQHMSKEEEQVFPLLIEKFSFEE 184
LFE +++NE +Y ++L A HM +EEE P+L+E F++EE
Sbjct: 90 -SLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEYFTYEE 146
>sp|Q5R6E1|FBXL5_PONAB F-box/LRR-repeat protein 5 OS=Pongo abelii GN=FBXL5 PE=2 SV=1
Length = 691
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 70 TNLGGGGDINKLLERYHFFRAIYKHHCNAEDEVIFPALDIRVKNIARTYSLEHEGESVLF 129
TN D LL+ + +K H E+E I L R + I +S E +
Sbjct: 32 TNFSNNNDFRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKLSEML-- 89
Query: 130 DQLFELLNSSMRNEE---SYRRELASCTGALQTSISQHMSKEEEQVFPLLIEKFSFEE 184
LFE +++NE +Y ++L A HM +EEE P+L+E F++EE
Sbjct: 90 -SLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEYFTYEE 146
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICS----KSLGDMAVYFGM 1173
+C IC + + + VR L C HF H +C + H CPIC K LG V
Sbjct: 255 SCVICFE-RYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICKCDILKVLGIQVVVENG 313
Query: 1174 LDAL--LASEQLPE 1185
+ L L S +LPE
Sbjct: 314 TEPLQVLMSNELPE 327
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6 PE=1
SV=2
Length = 398
Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 1116 ETNCPICCDFLFTSSATVRALP-CGHFMHSDCFQAYTCSHYICPICSKSLGD 1166
E C IC + F T+R LP C H H C A+ +H CP+C +L +
Sbjct: 125 ELECAICLN-EFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAE 175
>sp|Q6INS1|FBXL5_XENLA F-box/LRR-repeat protein 5 OS=Xenopus laevis GN=fbxl5 PE=2 SV=1
Length = 678
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 70 TNLGGGGDINKLLERYHFFRAIYKHHCNAEDEVIFPALDIRVKNIARTYSLEHEGESVLF 129
TN D+ LL+ + +K H E+E I L R + +S E ++
Sbjct: 32 TNFSNNNDLLALLQSLYETFKEFKMHEQIENEYIIGLLQQRSHTVYNVHSDNKLSEMLV- 90
Query: 130 DQLFELLNSSMRNEE---SYRRELASCTGALQTSISQHMSKEEEQVFPLLIEKFSFEEQA 186
LFE +++NE +Y ++L A + HM +EEE P+L+E F+++E
Sbjct: 91 --LFEKGMKNVKNEYKQLNYVQQLKERLEAFTSDFLPHMKEEEEVFQPMLMEYFTYDEMK 148
Query: 187 SL 188
+
Sbjct: 149 DI 150
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 1109 KCREKGLET---NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSLG 1165
K EKG++ NC +C + F +R LPC H H C + H CP+C +
Sbjct: 252 KHGEKGIDVDAENCAVCIEN-FKVKDVIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVI 310
Query: 1166 DMAVYFG 1172
Y+G
Sbjct: 311 KALGYWG 317
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 1109 KCREKGLET---NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSLG 1165
K EKG++ NC +C + F +R LPC H H C + H CP+C +
Sbjct: 256 KHGEKGIDVDAENCAVCIEN-FKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVI 314
Query: 1166 DMAVYFG 1172
Y+G
Sbjct: 315 KALGYWG 321
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 41.6 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 1112 EKGLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPIC 1160
+ G ET C +C D+ F + +R LPC H H DC + CP+C
Sbjct: 319 DPGAET-CAVCLDY-FCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLC 365
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 40.8 bits (94), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICS----KSLG 1165
+C +C + + S VR L C HF H +C + H CP+C KSLG
Sbjct: 259 SCAVCIE-PYKPSDVVRILTCNHFFHKNCIDPWLLEHRTCPMCKCDILKSLG 309
>sp|Q5XGI3|FBXL5_XENTR F-box/LRR-repeat protein 5 OS=Xenopus tropicalis GN=fbxl5 PE=2 SV=1
Length = 660
Score = 40.8 bits (94), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 70 TNLGGGGDINKLLERYHFFRAIYKHHCNAEDEVIFPALDIRVKNIARTYSLEHEGESVLF 129
TN D LL+ + +K H E+E I L R + + +S E ++
Sbjct: 32 TNFSSNTDFLALLQSLYETFKEFKMHEQIENEYIIGLLQQRSQTVFNVHSDNKLSEMLV- 90
Query: 130 DQLFELLNSSMRNEE----SYRRELASCTGALQTSISQHMSKEEEQVFPLLIEKFSFEE 184
LFE M+N E +Y ++L A + HM +EEE P+L+E F+++E
Sbjct: 91 --LFE---KGMKNNEYEQLNYAQQLKERLEAFTSDFLPHMKEEEEVFQPMLMEYFTYDE 144
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 1109 KCREKGLETNCPICCDFLFTSSATVRALP-CGHFMHSDCFQAYTCSHYICPICSKSL 1164
K K LE C IC + L TVR LP C H H DC + SH CP+C +L
Sbjct: 116 KIGSKDLE--CAICLNEL-EDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 1109 KCREKGLET---NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICS---- 1161
K EKG++ NC +C + + + VR LPC H H C + H CP+C
Sbjct: 251 KKGEKGIDIDAENCAVCIEN-YKTKDLVRILPCKHIFHRLCIDPWLIEHRTCPMCKLDVI 309
Query: 1162 KSLG 1165
K+LG
Sbjct: 310 KALG 313
>sp|P29129|ICP0_SUHVF E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain
Indiana-Funkhauser / Becker) GN=EP0 PE=2 SV=1
Length = 410
Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICS 1161
+CPIC D T + T LPC H DC Q +T + CP+C+
Sbjct: 45 DCPICLDVAATEAQT---LPCMHKFCLDCIQRWTLTSTACPLCN 85
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 1082 RVGRGLGVDFFHCMTCNCCLAKKLVDHKCREKGLETNCPICCDFLFTSSATVRALP-CGH 1140
R RGLG D + L ++ K + G+E C IC + F T+R +P C H
Sbjct: 95 RTSRGLGKDVINSFPS--FLYSQVKGLKIGKGGVE--CAICLN-EFEDEETLRLMPPCSH 149
Query: 1141 FMHSDCFQAYTCSHYICPICSKSL 1164
H+ C + S CP+C SL
Sbjct: 150 AFHASCIDVWLSSRSTCPVCRASL 173
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 40.4 bits (93), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 1116 ETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPIC 1160
E NC +C D + VR L C HF H C + +H CP+C
Sbjct: 255 EDNCVVCFD-TYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMC 298
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 1119 CPICCDFLFTSSATVRALP-CGHFMHSDCFQAYTCSHYICPICSKSLGD 1166
C IC + F T+R LP C H H C A+ H CP+C +L +
Sbjct: 124 CAICLN-EFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAE 171
>sp|Q2TA44|RN148_BOVIN RING finger protein 148 OS=Bos taurus GN=RNF148 PE=2 SV=1
Length = 303
Score = 40.0 bits (92), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 1116 ETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPIC 1160
E NC +C D ++ VR L C H H C + +H CP+C
Sbjct: 253 EDNCVVCFD-IYKPQDVVRILTCKHIFHKACIDPWLLAHRTCPMC 296
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICS----KSLG 1165
NC +C + + + VR LPC H H C + H CP+C K+LG
Sbjct: 276 NCAVCIEG-YKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALG 326
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1116 ETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPIC 1160
E +C +C D ++ + +R L C HF H C + +H CP+C
Sbjct: 266 EDSCVVCFD-MYKAQDVIRILTCKHFFHKTCIDPWLLAHRTCPMC 309
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2 PE=2
SV=1
Length = 707
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 1114 GLETNCPICC-DFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSK 1162
G E CPICC +++ AT LPC HF H C + CP+C +
Sbjct: 628 GQEQCCPICCSEYIKDDIAT--ELPCHHFFHKPCVSIWLQKSGTCPVCRR 675
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICS----KSLG 1165
NC +C + + + VR LPC H H C + H CP+C K+LG
Sbjct: 277 NCAVCIEG-YKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALG 327
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1 SV=2
Length = 707
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 1114 GLETNCPICC-DFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSK 1162
G E CPICC +++ AT LPC HF H C + CP+C +
Sbjct: 628 GQEQCCPICCSEYIKDDIAT--ELPCHHFFHKPCVSIWLQKSGTCPVCRR 675
>sp|Q9R049|AMFR_MOUSE E3 ubiquitin-protein ligase AMFR OS=Mus musculus GN=Amfr PE=1 SV=2
Length = 643
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
+C IC D S R LPCGH H+ C +++ CP C SL
Sbjct: 340 DCAICWD----SMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL 382
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 1119 CPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPIC 1160
C IC + + + VR L C HF H +C + SH CPIC
Sbjct: 256 CVICFEH-YKPNDIVRILTCKHFFHKNCIDPWILSHGTCPIC 296
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2 SV=1
Length = 708
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 1105 LVDHKCREKGLETNCPICC-DFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSK 1162
L DH G E CPICC +++ AT LPC HF H C + CP+C +
Sbjct: 622 LEDHTA--IGQEQCCPICCSEYIKDDIAT--ELPCHHFFHKPCVSIWLQKSGTCPVCRR 676
>sp|Q9UKV5|AMFR_HUMAN E3 ubiquitin-protein ligase AMFR OS=Homo sapiens GN=AMFR PE=1 SV=2
Length = 643
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
+C IC D S R LPCGH H+ C +++ CP C SL
Sbjct: 340 DCAICWD----SMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL 382
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1 SV=4
Length = 708
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 1105 LVDHKCREKGLETNCPICC-DFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSK 1162
L DH G E CPICC +++ AT LPC HF H C + CP+C +
Sbjct: 622 LEDHTA--IGQEQCCPICCSEYIKDDIAT--ELPCHHFFHKPCVSIWLQKSGTCPVCRR 676
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
CP+C F TVR LPC H HS C + CP+C L
Sbjct: 78 KCPVCL-LEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHEL 123
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
CP+C F TVR LPC H HS C + CP+C L
Sbjct: 78 KCPVCL-LEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHEL 123
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 1111 REKGL--ETNCPICCDFLFTSSATVRALP-CGHFMHSDCFQAYTCSHYICPICSKSLGDM 1167
R GL T+CP+C + F ++R LP C H H C + SH CP+C + +
Sbjct: 167 RGDGLIERTDCPVCLN-EFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMI 225
Query: 1168 AV 1169
+V
Sbjct: 226 SV 227
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 1118 NCPIC-CDFLFTSSATVRALP-CGHFMHSDCFQAYTCSHYICPICSKSL 1164
+CP+C C+F + +R LP C H H +C + SH CP+C +L
Sbjct: 125 DCPVCLCEF--ETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNL 171
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1 SV=3
Length = 578
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 1114 GLETNCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPIC 1160
G E CPICC + LPC H+ H C + CP+C
Sbjct: 525 GQEMCCPICCS-EYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVC 570
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICS----KSLGDMAVYFGM 1173
+C IC + + + VR L C HF H +C + +H CP+C K+LG
Sbjct: 255 SCVICFE-AYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCKCDILKALGIQMDIEDG 313
Query: 1174 LDAL--LASEQLP 1184
D+L L S +LP
Sbjct: 314 TDSLQVLMSNELP 326
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=2
SV=1
Length = 338
Score = 38.9 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 1119 CPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICSKSL 1164
C +C D F + +PC H H DC + H CP+C L
Sbjct: 224 CAVCMDD-FEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHEL 268
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 1118 NCPICCDFLFTSSATVRALPCGHFMHSDCFQAYTCSHYICPICS----KSLGDMAVYFGM 1173
+C IC + + + VR L C HF H +C + +H CP+C K+LG
Sbjct: 255 SCVICFE-AYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCKCDILKALGIQMDIEDG 313
Query: 1174 LDAL--LASEQLPEEYRDRCQEI 1194
D+L L S +LP + +E+
Sbjct: 314 SDSLQVLMSNELPGTFSAMEEEL 336
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,424,466
Number of Sequences: 539616
Number of extensions: 17848660
Number of successful extensions: 54256
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 53671
Number of HSP's gapped (non-prelim): 568
length of query: 1239
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1110
effective length of database: 121,958,995
effective search space: 135374484450
effective search space used: 135374484450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)