Query 000884
Match_columns 1237
No_of_seqs 573 out of 2481
Neff 6.8
Searched_HMMs 29240
Date Tue Mar 26 17:33:09 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000884.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_652-656//hhsearch_pdb/000884hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n0a_A Tyrosine-protein phosph 1.0 1 1 603.2 31.5 330 8-369 16-356 (361)
2 3v0d_A Voltage-sensor containi 1.0 1 1 590.2 30.4 317 2-340 5-338 (339)
3 2j1d_G DAAM1, disheveled-assoc 1.0 1 1 559.1 34.4 366 864-1233 7-386 (483)
4 3obv_E Protein diaphanous homo 1.0 1 1 552.3 33.7 366 866-1234 4-375 (457)
5 4eah_A Formin-like protein 3, 1.0 1 1 548.9 31.5 358 864-1234 11-372 (402)
6 1ux5_A BNI1 protein; structura 1.0 1 1 519.4 14.5 359 866-1234 3-390 (411)
7 1v9d_A Diaphanous protein homo 1.0 1 1 492.3 28.1 301 934-1234 4-304 (340)
8 1d5r_A Phosphoinositide phosph 1.0 1 1 490.1 32.3 303 4-341 7-324 (324)
9 2c46_A MRNA capping enzyme; ph 1.0 1 1 160.4 13.7 155 17-188 40-200 (241)
10 3rz2_A Protein tyrosine phosph 1.0 1 1 142.9 11.3 152 10-191 26-177 (189)
No 1
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=1.00 E-value=1 Score=603.15 Aligned_cols=330 Identities=20% Similarity=0.381 Sum_probs=291.2
Q ss_pred CCCCCCCCEEEEECCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEE
Q ss_conf 05899997023507579960787899951455403787999997230999958999837774013321012335851874
Q 000884 8 FFRKPPDGLLEISERVYVFNCCFTTDAWEEEDYKKYIGGIIGQLREHSPDSQFLVFNFREEETKSLMANVLSEFDITIMD 87 (1237)
Q Consensus 8 ~~~~~~lDL~yIT~RIiam~~~fPa~~~~e~~YRn~i~~V~~~L~~~h~~~~y~V~Nl~~~~~~s~~~~~~s~~~~~V~~ 87 (1237)
.|.+.+|||+|||+||||| +||++++ |+.|||++++|++||+++|++| |+|||||++.|+ .++|+++|.+
T Consensus 16 ~~~~~~LDltyIT~riIam--~~P~~~~-e~~yrn~i~~v~~~L~~~H~~~-y~V~NLse~~Yd------~~~f~~~V~~ 85 (361)
T 3n0a_A 16 SYTKGDLDFTYVTSRIIVM--SFPLDSV-DIGFRNQVDDIRSFLDSRHLDH-YTVYNLSPKSYR------TAKFHSRVSE 85 (361)
T ss_dssp EEESSSCEEEESSSSEEEE--EC-------------CHHHHHHHHHHHTTC-EEEEECSSSCCG------GGSCGGGEEE
T ss_pred HHCCCCCCEEEECCCEEEE--ECCCCCC-HHHHCCCHHHHHHHHHHHCCCE-EEEEECCCCCCC------HHHCCCCEEE
T ss_conf 7458986079982878999--8998771-4442599999999999748990-799979987778------0450783899
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHH
Q ss_conf 87898999965199999999999999971998099999636996514688999999970799999999999985503231
Q 000884 88 YPRQYEGCPLLTMEVIHHFLRSTESWLSLGQHNVLMMHCERGGWPVLAFMLAALLIYRKQYSGEYKTLDMIYRQAPRELL 167 (1237)
Q Consensus 88 yP~~d~~~P~p~l~~l~~~~~~i~~WL~~d~~NVvviHCk~Gkgrt~g~~ia~~Lly~~~~~~~~~aL~~~~~~~~~~~~ 167 (1237)
|+|.||++| +++.|+.||+.|+.||.++++|+|+|||++|+||| |+|+||||+|++.+.++++|+++|..+++..
T Consensus 86 ~~~pD~~~P--~l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG~GRt-g~~ia~~Li~~~~~~~~~eAl~~~~~~R~~~-- 160 (361)
T 3n0a_A 86 CSWPIRQAP--SLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAAS-SILVGAMFIFCNLYSTPGPAVRLLYAKRPGI-- 160 (361)
T ss_dssp CCCCSSSCC--CHHHHHHHHHHHHHHHHHCTTCEEEEEECSCTHHH-HHHHHHHHHHTTSCSSHHHHHHHHHHHSTTC--
T ss_pred EECCCCCCC--CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH-HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC--
T ss_conf 662899998--99999999999999974389974999958999607-9999999998357799999999999758999--
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCC-CCCCEEEEEEECCCCCCCCCCCCEEEEC
Q ss_conf 257899999649999999997313788899986038976876426876899-9740399998268874357998089964
Q 000884 168 QLLSPLNPVPSQLRYLQYVSRRNVVSEWPPLDRALTLDCVILRSIPNFDGQ-GGCRPIFRIYGQDPFVANDRSAKVLYST 246 (1237)
Q Consensus 168 ~~v~~l~~~PSQ~RYv~Yf~~~~~~~~~~p~~~~l~L~~I~l~~iP~f~~~-~gcrp~~~Iy~~~~~~~~~~~~~~l~st 246 (1237)
+ .+|||+|||+||++++.+..|.|+.++|+|++|+|++||.|++. +|||||++||+++ +.||++
T Consensus 161 -----~-~~psQ~ryv~yf~~ll~~~~~~P~~~~L~L~~i~l~~iP~f~~~~~GCrP~~~Iy~~~---------~~v~ss 225 (361)
T 3n0a_A 161 -----G-LSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSITVSPVPFFNKQRNGCRPYCDVLIGE---------TKIYTT 225 (361)
T ss_dssp -----C-CCHHHHHHHHHHHHHHSSSCCCCCCCCEEEEEEEEESCCCCSTTSSEECEEEEEEETT---------EEEEEC
T ss_pred -----C-CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEECC---------EEEEEC
T ss_conf -----9-9999999999999997167768887505899999736776447899744699999388---------079954
Q ss_pred CCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEEECCCCC-------CCCCEEEEEEECCCCCCCC--EEEEECCCCCC
Q ss_conf 67764302331356228996479610198599999358843-------4552189998104321299--69960566856
Q 000884 247 SKRSKAVRTYKQAECELVKIDINCCIQGDVVLECISLNDDL-------EREEMMFRVVFNTAFIRSN--ILMLNLDEVDI 317 (1237)
Q Consensus 247 ~~~~~~~~~y~~~d~~~i~~~~~~~i~GDV~i~~~h~~~~~-------~~~~~ifr~~FnT~FI~~n--~l~l~k~eLD~ 317 (1237)
.+.++.++.|.+.++. |.|++++.|+|||+|+|||++... .++++||||||||+||++| +|+|+|+|||.
T Consensus 226 ~~~~~~~r~~~~~~~~-i~i~~~~~l~GDV~v~~~h~~~~~g~~l~~k~~~~~mFr~~FhT~FI~~~~~~l~~~k~eLD~ 304 (361)
T 3n0a_A 226 CADFERMKEYRVQDGK-IFIPLSITVQGDVVVSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDA 304 (361)
T ss_dssp CCCGGGSCCEEGGGCC-EEEEEEEEECSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEGGGSCTTCCEEEEEGGGCBS
T ss_pred CCHHHCCCCCCCCCCE-EEECCCCEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEHHHCCC
T ss_conf 7301003454346865-981799958889999998478764644455545545899995656955896499968356656
Q ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHH
Q ss_conf 545779899995899999506866445446557-7310499875779999998
Q 000884 318 LWNAKELFPKEFRAEILFSEMDAAAAVVAADVS-CFEEKGGLPVEAFAKVHEI 369 (1237)
Q Consensus 318 ~~~~k~~fp~dF~vel~F~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~ 369 (1237)
|+.++|||++|+|+|.|+.............| ..+.+...+...|+..+|.
T Consensus 305 -~~~~~rfp~~f~v~l~f~~~~~~r~~~~~~~w~~~~~~~~~~~~~fs~~~e~ 356 (361)
T 3n0a_A 305 -CDVPEKYPQLFQVTLDVELQPHDKVMELTPPWEHYCTKDVNPSILFSSHQEH 356 (361)
T ss_dssp -CCCGGGSCTTCEEEEEEEECSSCCCCSSCCGGGGCCCTTCCGGGGCSSHHHH
T ss_pred -CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHH
T ss_conf -3210239988589999996677788789998536785689854200778886
No 2
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=1.00 E-value=1 Score=590.17 Aligned_cols=317 Identities=17% Similarity=0.289 Sum_probs=269.4
Q ss_pred CCHHHHCCC--------CCCCCEEEEECCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
Q ss_conf 102331058--------999970235075799607878999514554037879999972309999589998377740133
Q 000884 2 ALLRRLFFR--------KPPDGLLEISERVYVFNCCFTTDAWEEEDYKKYIGGIIGQLREHSPDSQFLVFNFREEETKSL 73 (1237)
Q Consensus 2 ~~~r~~~~~--------~~~lDL~yIT~RIiam~~~fPa~~~~e~~YRn~i~~V~~~L~~~h~~~~y~V~Nl~~~~~~s~ 73 (1237)
+++|++|++ +.+|||+|||+||||| |||+++. |+.|||++++|++||+++|++| |+|||||+|+.|
T Consensus 5 ~~~r~~vs~~k~r~~~~~~~LDltyIT~riIam--~~P~~~~-e~~yRn~i~dv~~~L~~~h~~~-y~V~NL~sE~~Y-- 78 (339)
T 3v0d_A 5 ASSRRTISQNKRRYRKDGFDLDLTYVTDHVIAM--SFPSSGR-QSLFRNPIGEVSRFFKTKHPDK-FRIYNLCSERGY-- 78 (339)
T ss_dssp ---------CTTEEEETTEEEEEEEEETTEEEE--CCEESSS-CCTTSEEHHHHHHHHHHHSTTC-EEEEEEETTCCC--
T ss_pred HHHHHHHCCCCEEECCCCCCEEEEEEECCEEEE--ECCCCCC-HHHCCCCHHHHHHHHHHHCCCC-EEEEECCCCCCC--
T ss_conf 899998642645520599753688980678999--8999885-4430599999999999758996-699987888889--
Q ss_pred HHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHH
Q ss_conf 21012335851874878989999651999999999999999719980999996369965146889999999707999999
Q 000884 74 MANVLSEFDITIMDYPRQYEGCPLLTMEVIHHFLRSTESWLSLGQHNVLMMHCERGGWPVLAFMLAALLIYRKQYSGEYK 153 (1237)
Q Consensus 74 ~~~~~s~~~~~V~~yP~~d~~~P~p~l~~l~~~~~~i~~WL~~d~~NVvviHCk~Gkgrt~g~~ia~~Lly~~~~~~~~~ 153 (1237)
+.++|+++|.+|||.||++| +++.|+.||+.|+.||+++++|+|+|||++|+||| |+|+||||+|++.+.++++
T Consensus 79 ---d~~~f~~~v~~~p~pD~~~P--~~~~l~~~~~~v~~~l~~~~~~~v~vHC~~G~gRt-g~~ia~~Li~~~~~~~~~~ 152 (339)
T 3v0d_A 79 ---DETKFDNHVYRVMIDDHNVP--TLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRT-GTLVSSWLLEDGKFDTAKE 152 (339)
T ss_dssp ---CGGGGTTCEEEEEECTTSCC--CHHHHHHHHHHHHHHHHTCTTCEEEEECSSSSHHH-HHHHHHHHHHTTSCSSHHH
T ss_pred ---CHHHCCCEEEEECCCCCCCC--CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH-HHHHHHHHHHHCCCCCHHH
T ss_conf ---94783871999534899997--98999999999999996289970899837999606-9999999998268899999
Q ss_pred HHHHHHHHCHH-HHHCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECC
Q ss_conf 99999985503-23125789999964999999999731378-88999860389768764268768999740399998268
Q 000884 154 TLDMIYRQAPR-ELLQLLSPLNPVPSQLRYLQYVSRRNVVS-EWPPLDRALTLDCVILRSIPNFDGQGGCRPIFRIYGQD 231 (1237)
Q Consensus 154 aL~~~~~~~~~-~~~~~v~~l~~~PSQ~RYv~Yf~~~~~~~-~~~p~~~~l~L~~I~l~~iP~f~~~~gcrp~~~Iy~~~ 231 (1237)
|+++|..+++. ++.+..++ +++|||+|||+||++++.+. .+.|+.++++|++|+|++||.|++++||||+++||+++
T Consensus 153 Al~~~~~~R~~~~~~~~~~~-v~~psQ~Ryv~yf~~~l~~~~~~~p~~~~l~L~~i~l~~iP~f~~~~Gcrp~~~Iy~~~ 231 (339)
T 3v0d_A 153 ALEYFGSRRTDFEVGDVFQG-VETASQIRYVGYFEKIKKNYGGQLPPMKKLKVTGVTITAIQGVGRGNGSDLSMQIVSER 231 (339)
T ss_dssp HHHHHHHHHSSCCTTSCCCC-C-CHHHHHHHHHHHHHHHHSTTSCCCCCCEEEEEEEEECCTTSTTSSSTTEEEEEEETT
T ss_pred HHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECC
T ss_conf 99999976577654445666-47799999999999998634765798714899999995787657899855459999387
Q ss_pred CCCCCCCCCCEEEECC-CCCCCCEEECCCCCEEEEECC--CCCCCCCEEEEEEECCCCC--CCCCEEEEEEECCCCCCCC
Q ss_conf 8743579980899646-776430233135622899647--9610198599999358843--4552189998104321299
Q 000884 232 PFVANDRSAKVLYSTS-KRSKAVRTYKQAECELVKIDI--NCCIQGDVVLECISLNDDL--EREEMMFRVVFNTAFIRSN 306 (1237)
Q Consensus 232 ~~~~~~~~~~~l~st~-~~~~~~~~y~~~d~~~i~~~~--~~~i~GDV~i~~~h~~~~~--~~~~~ifr~~FnT~FI~~n 306 (1237)
+++|++. ...+.++.+.+.+++.+.|++ ++.|+|||+|+|||.+..+ +.+++||||||||+||++|
T Consensus 232 ---------~~v~~s~~~~~~~~~~~~~~~~~~i~i~l~~~~~l~GDV~v~~~h~~~~l~~~~~~~~F~~~FhT~fI~~~ 302 (339)
T 3v0d_A 232 ---------QEVLLCKFAEGYNCALQYDATDDCVTCEVKNCPVLAGDIKVRFMSTSKSLPRGYDNCPFYFWFNTSLVEGD 302 (339)
T ss_dssp ---------EEEEEEETTTTBTEEEEEETTTTEEEEEECSCCCBCSEEEEEEEECCTTSCCCGGGSSEEEEEEGGGCCTT
T ss_pred ---------EEEEEECCCCCCCEEEEEECCCCEEEEEECCCCEEECCEEEEEEECCCCCCCCCCCEEEEEEEECEEEECC
T ss_conf ---------58998437776552688506897699980899867378899999766655654413379999796085888
Q ss_pred EEEEECCCCCCCCCCC--CCCCCCCEEEEEEEECCC
Q ss_conf 6996056685654577--989999589999950686
Q 000884 307 ILMLNLDEVDILWNAK--ELFPKEFRAEILFSEMDA 340 (1237)
Q Consensus 307 ~l~l~k~eLD~~~~~k--~~fp~dF~vel~F~~~~~ 340 (1237)
+|+|+|+|||.+|++| ++|++||+|||+|+++++
T Consensus 303 ~l~l~k~eLD~~~k~k~~~~f~~dF~Vel~F~~~~~ 338 (339)
T 3v0d_A 303 HVTLKREEIDNPHKKKTWKIYRDNFTVKLTFSDAED 338 (339)
T ss_dssp EEEEEGGGSBTTTSGGGTTTSCTTCEEEEEEEECCC
T ss_pred EEEEEHHHCCCCCCCCCCCCCCCCEEEEEEEECCCC
T ss_conf 999882671363433334558998399999954655
No 3
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=1.00 E-value=1 Score=559.13 Aligned_cols=366 Identities=26% Similarity=0.526 Sum_probs=331.4
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC-------CCCCCCC--C-CCC
Q ss_conf 5656556545444212355-456753333322575566977675669999741189987-------8999999--8-899
Q 000884 864 SRSHQTKKLKPLHWLKLTR-AVQGSLWAEAQKSGEASKAPEIDMSELENLFSATIPNSE-------KGGKPNQ--R-VPR 932 (1237)
Q Consensus 864 ~~~~~k~klK~LhW~kI~~-~~~~TiW~~l~~~~~~~~~~~~D~~eLE~lF~~~~~~~~-------~~k~~~~--~-~s~ 932 (1237)
....|+.+||+|||++|.. .+.+|||++++... ....+|+++||++|+++..... +.+..+. . ...
T Consensus 7 ~~~~P~~klK~l~W~ki~~~~~~~TiW~~~~~~~---~~~~ld~~~lE~lF~~~~~~~~~~~~~~~~~k~~~s~~~~~~~ 83 (483)
T 2j1d_G 7 SIPQPTNALKSFNWSKLPENKLEGTVWTEIDDTK---VFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSS 83 (483)
T ss_dssp CCCCCSSCBCCCCCCCCCGGGCSSSGGGGCCGGG---HHHHSCHHHHHHHTBSBC-------------------------
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHH---HCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999988969348981012598667587312---1144699999999851203343334443323334664322222
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 99898511247311122331223577895899999960148-88998899999822999899999840029933248168
Q 000884 933 GPQSDKVQLIDHRRAYNCEIMLSKVKVPLPELMRSVLALED-SAIDADQVENLIKFCPTKEEMDLLKGYTGDKEKLGKCE 1011 (1237)
Q Consensus 933 ~~k~~ki~iLd~kRa~Ni~I~L~klk~~~~ei~~ail~lD~-~~L~~e~i~~Llk~~Pt~eE~~~Lk~~~~~~~~L~~~E 1011 (1237)
.+++++++|||.+|||||+|+|++|+++.++|+.+|+++|+ .+|+.|.|+.|++++||.||+++|++|.++.+.|+.+|
T Consensus 84 ~kk~~~v~lLD~kRaqNi~I~L~~lk~~~~ei~~aIl~~D~~~~L~~e~l~~Ll~~~Pt~eE~~~l~~~~~d~~~L~~aE 163 (483)
T 2j1d_G 84 KLKVKELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKAD 163 (483)
T ss_dssp ----CCBCCSCHHHHHHHHHHHHHHCCCHHHHHHHHHTTSTTCCCCHHHHHHHHHSCCCHHHHHHHHTTTTCGGGBCHHH
T ss_pred CCCCCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCHHH
T ss_conf 35777432277788989999984379898999999981685245899999999984999799999987256823148899
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99999826762788899998999989989999999999999999999517899999999984134554687654444451
Q 000884 1012 QFFLELMKVPRVESKLRVFSFKIQFHTQVSDLRSSLNVVNSAAEQVRNSAKLRRIMQTILSLGNALNQGTARGAAIGFRL 1091 (1237)
Q Consensus 1012 qF~~~l~~vp~~~~rL~~l~fk~~f~~~i~~i~~~l~~l~~A~~el~~S~~L~~iL~~IL~lGN~LN~gt~rg~A~GFkL 1091 (1237)
||+++|+.||+++.||++|.|+.+|.+.+.+++..+..+..||++|++|++|+.+|++||++|||||+| .||+|.||+|
T Consensus 164 qFl~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~IL~~GN~mN~g-~rg~A~GFkL 242 (483)
T 2j1d_G 164 RFLFEMSRINHYQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKG-QRGNAYGFKI 242 (483)
T ss_dssp HHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCS-SSCCCSCCCG
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC-CCCCCEEEEH
T ss_conf 999999577648888999999999999999999999999999999983568999999999986553368-7777323516
Q ss_pred HHHHHHHHHCCC-CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-
Q ss_conf 006534321024-886414678999986039431121101369278866549999999999999899999985113478-
Q 000884 1092 DSLLKLTDTRAR-NNKMTLMHYLCKVLADKLPELLDFSEDLTSLEPASKIQLKFLAEEMQALSKGLEKVVQELSMSEND- 1169 (1237)
Q Consensus 1092 ~sL~KL~dtKs~-d~k~tLLh~lv~~l~e~~pell~f~~eL~~l~~Askv~l~~L~~ei~~l~k~l~kl~~el~~s~~d- 1169 (1237)
++|.||.|||++ |+++|||||||+++.+++|++++|.+||.+|+.|++++++.|..++++|.++++.+++++.....+
T Consensus 243 ~sL~KL~d~Ks~~d~k~TLLhylv~~v~~~~p~l~~f~~eL~~v~~Askv~~~~l~~~~~~L~~~l~~v~~~l~~~~~~~ 322 (483)
T 2j1d_G 243 SSLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQP 322 (483)
T ss_dssp GGGGGGGGSBCSSCTTCBHHHHHHHHHHHHCGGGGGHHHHTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89986520205789986499999999997483062227777618887328999999999999999999999999865268
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 7322459999999999999999999999999999999999770669999997999999999761
Q 000884 1170 GAISENFSKILREFLRFAEAEVRTLASLYSAVGRNVDALILYFGEDPARCPFEQAQIGVIRSAD 1233 (1237)
Q Consensus 1170 ~~~~d~F~~~l~~Fl~~a~~~i~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~~fs~l~~F~d 1233 (1237)
....|.|..+|..|+..|+.++..|+..+.++.+.|.+++.|||||++++..++||.+|..|+.
T Consensus 323 ~~~~d~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~~~fF~~~~~F~~ 386 (483)
T 2j1d_G 323 PQPGDKFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFGIFDQFLQ 386 (483)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 8720058999999999999999999999999999999999993989787889999999999999
No 4
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=1.00 E-value=1 Score=552.34 Aligned_cols=366 Identities=23% Similarity=0.425 Sum_probs=330.7
Q ss_pred CCCCCCCCCCCCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC--CCCC-CCC-CCCCCCCC
Q ss_conf 56556545444212355-45-6753333322575566977675669999741189987899--9999-889-99989851
Q 000884 866 SHQTKKLKPLHWLKLTR-AV-QGSLWAEAQKSGEASKAPEIDMSELENLFSATIPNSEKGG--KPNQ-RVP-RGPQSDKV 939 (1237)
Q Consensus 866 ~~~k~klK~LhW~kI~~-~~-~~TiW~~l~~~~~~~~~~~~D~~eLE~lF~~~~~~~~~~k--~~~~-~~s-~~~k~~ki 939 (1237)
-.|+.+||++||.+|.. .+ ++|||.+++.... ....++++||.+|+++.......+ .++. .++ ..+|.+.|
T Consensus 4 ~~P~~~mK~l~W~ki~~~~~~~~t~W~~~~e~~~---~~~~~f~~Le~~F~~~~~~~~~~k~~~~~~~~~~~~~kk~~~v 80 (457)
T 3obv_E 4 YKPEVQLRRPNWSKFVAEDLSQDCFWTKVKEDRF---ENNELFAKLTLAFSAQTKTSKAKKDQEGGEEKKSVQKKKVKEL 80 (457)
T ss_dssp CCCSSCBCCCCCCEECTTTTCSSSSGGGCCGGGG---CCTTHHHHHHHHTBCC-----------------------CCCC
T ss_pred CCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCC---CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 9999997088753578655678850000762113---6745899999885456554345555444533211123678635
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 12473111223312235778958999999601488899889999982299989999984002993324816899999826
Q 000884 940 QLIDHRRAYNCEIMLSKVKVPLPELMRSVLALEDSAIDADQVENLIKFCPTKEEMDLLKGYTGDKEKLGKCEQFFLELMK 1019 (1237)
Q Consensus 940 ~iLd~kRa~Ni~I~L~klk~~~~ei~~ail~lD~~~L~~e~i~~Llk~~Pt~eE~~~Lk~~~~~~~~L~~~EqF~~~l~~ 1019 (1237)
+|||.||||||+|+|++++++.++|+.+|+++|+.+|+.|.|+.|++++||.||++.|++|.++...|+.+|||+++|+.
T Consensus 81 ~lLD~kraqNi~I~L~~lk~~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~d~~~L~~~EqF~~~l~~ 160 (457)
T 3obv_E 81 KVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMGT 160 (457)
T ss_dssp SSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTTTCCHHHHHHHHHHCCCHHHHHHHHTTTTSGGGSCHHHHHHHHHTS
T ss_pred EECCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHC
T ss_conf 75677788689999833698999999999938835479999999998697989999999824672005879999999976
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 76278889999899998998999999999999999999951789999999998413455468765444445100653432
Q 000884 1020 VPRVESKLRVFSFKIQFHTQVSDLRSSLNVVNSAAEQVRNSAKLRRIMQTILSLGNALNQGTARGAAIGFRLDSLLKLTD 1099 (1237)
Q Consensus 1020 vp~~~~rL~~l~fk~~f~~~i~~i~~~l~~l~~A~~el~~S~~L~~iL~~IL~lGN~LN~gt~rg~A~GFkL~sL~KL~d 1099 (1237)
||+++.||++|.|+.+|.+.+.+++..+..+..||++|++|++|+.+|++||++|||||+|+.+|+|.||+|++|.||.|
T Consensus 161 Ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~sL~KL~d 240 (457)
T 3obv_E 161 VPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRD 240 (457)
T ss_dssp STTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTTSTTCSCSCBCGGGHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHH
T ss_conf 56489999999999988999999999999999999998706779999999999742501688677743573378887775
Q ss_pred HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 10248864146789999860394311211013692788665499999999999998999999851134787322459999
Q 000884 1100 TRARNNKMTLMHYLCKVLADKLPELLDFSEDLTSLEPASKIQLKFLAEEMQALSKGLEKVVQELSMSENDGAISENFSKI 1179 (1237)
Q Consensus 1100 tKs~d~k~tLLh~lv~~l~e~~pell~f~~eL~~l~~Askv~l~~L~~ei~~l~k~l~kl~~el~~s~~d~~~~d~F~~~ 1179 (1237)
||++|+++|||||||+++.+++|++++|.+||..|+.|++|+++.|..++++|.+++..++.++..........+.|..+
T Consensus 241 ~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakvs~~~l~~dl~~L~~~l~~v~~~l~~~~~~~~~~d~f~~~ 320 (457)
T 3obv_E 241 TKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEK 320 (457)
T ss_dssp CBCSSTTCBHHHHHHHHHHHHCGGGGGHHHHCTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHSCCCCSSTTCCHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 00678884189999999997083013772242437765127999999999999999999999998445773414779999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999999999999997706699999979999999997612
Q 000884 1180 LREFLRFAEAEVRTLASLYSAVGRNVDALILYFGEDPARCPFEQAQIGVIRSADR 1234 (1237)
Q Consensus 1180 l~~Fl~~a~~~i~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~~fs~l~~F~d~ 1234 (1237)
|..|+..|+.++..|+..+.++++.|.+++.|||||++++..++||++|..|++.
T Consensus 321 m~~Fl~~A~~~~~~L~~~~~~~~~~~~~l~~yFgedp~~~~~~eFF~~~~~F~~~ 375 (457)
T 3obv_E 321 MTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNM 375 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999857797879999999999999999
No 5
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=1.00 E-value=1 Score=548.90 Aligned_cols=358 Identities=27% Similarity=0.468 Sum_probs=323.8
Q ss_pred CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 565655654544421235-5456753333322575566977675669999741189987899999988999989851124
Q 000884 864 SRSHQTKKLKPLHWLKLT-RAVQGSLWAEAQKSGEASKAPEIDMSELENLFSATIPNSEKGGKPNQRVPRGPQSDKVQLI 942 (1237)
Q Consensus 864 ~~~~~k~klK~LhW~kI~-~~~~~TiW~~l~~~~~~~~~~~~D~~eLE~lF~~~~~~~~~~k~~~~~~s~~~k~~ki~iL 942 (1237)
....++.+||+|||.+|. .++.||||++++. .....++|+++||++|+.+...........+.+...++++++++|
T Consensus 11 k~~~~k~kmk~l~W~kl~~~~i~~Tiw~~~~~---~~~~~~ld~~~~E~lF~~k~~~~~~~~~~~k~k~~~k~~~~v~lL 87 (402)
T 4eah_A 11 KPIKTKFRLPVFNWTALKPNQINGTVFSELDD---EKILEDLDLDRFEELFKTKAQGPALDLICSKNKTAQKAASKVTLL 87 (402)
T ss_dssp CCCCCSSCCCCCCCCEECHHHHTTSTTSSCCT---TSCSSTTTHHHHHHHSCCCC--------------------CBCSS
T ss_pred CCCCCCCCCCCCCCEECCHHHCCCCCCCCCCH---HHHCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEC
T ss_conf 99998877778685459767535860557760---343045689999999741246776552000023334688712557
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCC---CCCCHHHHHHHHHHC
Q ss_conf 73111223312235778958999999601488899889999982299989999984002993---324816899999826
Q 000884 943 DHRRAYNCEIMLSKVKVPLPELMRSVLALEDSAIDADQVENLIKFCPTKEEMDLLKGYTGDK---EKLGKCEQFFLELMK 1019 (1237)
Q Consensus 943 d~kRa~Ni~I~L~klk~~~~ei~~ail~lD~~~L~~e~i~~Llk~~Pt~eE~~~Lk~~~~~~---~~L~~~EqF~~~l~~ 1019 (1237)
|.||||||+|+|++++++.++|+.+|+++|..+|+.|.|+.|++++||+||+++|++|.++. +.|+.+|||+++++.
T Consensus 88 d~kra~Ni~I~L~~l~~~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~~~~L~~~EqF~~~l~~ 167 (402)
T 4eah_A 88 EANRAKNLAITLRKAGRSAEEICRAIHTFDLQTLPVDFVECLMRFLPTEAEVKLLRQYERERQPLEELAAEDRFMLLFSK 167 (402)
T ss_dssp CHHHHHHHHHHHHHHCCCHHHHHHHHHTTSCSCCCHHHHHHHHHTCCCHHHHHHHHHHHHSSCCTTTBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHC
T ss_conf 77899899999863798999999999808834489999999986098979999999864357864441679999999973
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 76278889999899998998999999999999999999951789999999998413455468765444445100653432
Q 000884 1020 VPRVESKLRVFSFKIQFHTQVSDLRSSLNVVNSAAEQVRNSAKLRRIMQTILSLGNALNQGTARGAAIGFRLDSLLKLTD 1099 (1237)
Q Consensus 1020 vp~~~~rL~~l~fk~~f~~~i~~i~~~l~~l~~A~~el~~S~~L~~iL~~IL~lGN~LN~gt~rg~A~GFkL~sL~KL~d 1099 (1237)
||+++.||++|.|+.+|.+.+.+++..++.+..||++|++|++|+.+|++||++|||||+| .||+|.||+|++|.||.|
T Consensus 168 ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g-~rg~A~GFkL~sL~KL~d 246 (402)
T 4eah_A 168 VERLTQRMAGMAFLGNFQDNLQMLTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSS-KRGAVYGFKLQSLDLLLD 246 (402)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCS-SSCCCSCBCGGGGGSSSS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC-CCCCCCEEEHHHHHHHHH
T ss_conf 5639999999999999999999999999999999999871488999999999874132678-777623241788888884
Q ss_pred HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 10248864146789999860394311211013692788665499999999999998999999851134787322459999
Q 000884 1100 TRARNNKMTLMHYLCKVLADKLPELLDFSEDLTSLEPASKIQLKFLAEEMQALSKGLEKVVQELSMSENDGAISENFSKI 1179 (1237)
Q Consensus 1100 tKs~d~k~tLLh~lv~~l~e~~pell~f~~eL~~l~~Askv~l~~L~~ei~~l~k~l~kl~~el~~s~~d~~~~d~F~~~ 1179 (1237)
||++|+++|||||||+++.+++|++++|.+||..|+.|++|+++.|..++++|.++++.+++++.... . .+
T Consensus 247 ~Ks~d~k~TLLh~l~~~~~~~~p~l~~f~~eL~~v~~Aa~v~~~~l~~d~~~L~~~l~~~~~e~~~~d--~-------~~ 317 (402)
T 4eah_A 247 TKSTDRKMTLLHFIALTVKEKYPELANFWQELHFVEKAAAVSLENVLLDVKELGRGMELIRRECSIHD--N-------SV 317 (402)
T ss_dssp SBCTTSSSBHHHHHHHHHHHHCGGGGTCSTTCCSHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTTC--C-------TT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC--H-------HH
T ss_conf 45788986299999999996308998776655339989649999999999999999999999853032--4-------89
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999999999999997706699999979999999997612
Q 000884 1180 LREFLRFAEAEVRTLASLYSAVGRNVDALILYFGEDPARCPFEQAQIGVIRSADR 1234 (1237)
Q Consensus 1180 l~~Fl~~a~~~i~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~~fs~l~~F~d~ 1234 (1237)
|++|+..++.++..|...+.++.+.|.+++.|||||++++..++||++|..|+..
T Consensus 318 l~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgedpk~~~~~~fF~~~~~F~~~ 372 (402)
T 4eah_A 318 LRNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYFGESPKTTPPSVFFPVFVRFIRS 372 (402)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999948897879999999999999999
No 6
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=1.00 E-value=1 Score=519.41 Aligned_cols=359 Identities=21% Similarity=0.333 Sum_probs=312.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 565565454442123554567533333225755669-7767566999974118998789999998899998985112473
Q 000884 866 SHQTKKLKPLHWLKLTRAVQGSLWAEAQKSGEASKA-PEIDMSELENLFSATIPNSEKGGKPNQRVPRGPQSDKVQLIDH 944 (1237)
Q Consensus 866 ~~~k~klK~LhW~kI~~~~~~TiW~~l~~~~~~~~~-~~~D~~eLE~lF~~~~~~~~~~k~~~~~~s~~~k~~ki~iLd~ 944 (1237)
..|+.+||+|||++|.. .++|||++++........ ...|+++||++|+++..+.. +.+. .++.+++++||.
T Consensus 3 p~P~~klK~l~W~ki~~-~~~tiW~~~~~~~~~~~l~~~~d~~~lE~lF~~~~~~~~----~~~k---~~~~~~v~lLd~ 74 (411)
T 1ux5_A 3 PRPHKKLKQLHWEKLDC-TDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKSL----ASKR---KEDLQKITFLSR 74 (411)
T ss_dssp CCCSSCBCCCCCCCCSS-CCSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHHH----HHHH---HHTTTSBCCSCH
T ss_pred CCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCC----CCCC---CCCCCEEEECCH
T ss_conf 99999988868415999-999907677617778765110229999998434656543----4466---677770252476
Q ss_pred CCCCCCCCCCCCC-CCCHHHHHHHHHHCCCCCCCHHH-HHH------------HH-HCCCCHHHHH------HHHCCCCC
Q ss_conf 1112233122357-78958999999601488899889-999------------98-2299989999------98400299
Q 000884 945 RRAYNCEIMLSKV-KVPLPELMRSVLALEDSAIDADQ-VEN------------LI-KFCPTKEEMD------LLKGYTGD 1003 (1237)
Q Consensus 945 kRa~Ni~I~L~kl-k~~~~ei~~ail~lD~~~L~~e~-i~~------------Ll-k~~Pt~eE~~------~Lk~~~~~ 1003 (1237)
||||||+|+|+++ +++.++|+.+|+++|..+|+.+. ++. |+ +++|+.+|.+ .+++|.++
T Consensus 75 kraqNi~I~L~~~~~~~~~ei~~ai~~~D~~~L~~~~lie~L~~~~~~ei~~~L~~~~~P~~~e~e~l~~~~~~~~~~~d 154 (411)
T 1ux5_A 75 DISQQFGINLHMYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKD 154 (411)
T ss_dssp HHHHHHHHHTGGGTTSCHHHHHHHHHTTTHHHHTCHHHHHHTTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSC
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 78998989987417989999999998059653697899987023677766789998538994467888778876533699
Q ss_pred CCCCCHHHHHHHHHH-CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 332481689999982-67-6278889999899998998999999999999999999951789999999998413455468
Q 000884 1004 KEKLGKCEQFFLELM-KV-PRVESKLRVFSFKIQFHTQVSDLRSSLNVVNSAAEQVRNSAKLRRIMQTILSLGNALNQGT 1081 (1237)
Q Consensus 1004 ~~~L~~~EqF~~~l~-~v-p~~~~rL~~l~fk~~f~~~i~~i~~~l~~l~~A~~el~~S~~L~~iL~~IL~lGN~LN~gt 1081 (1237)
.+.|+.+|||+++++ .| ++++.||++|.|+.+|.+.+.+++..+..+..||++|++|++|+.+|++||++|||||+|+
T Consensus 155 ~~~L~~~eqf~~~l~~~i~~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~ 234 (411)
T 1ux5_A 155 PNDLQRADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTS 234 (411)
T ss_dssp STTBCHHHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGG
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 56678888999999985026699999999999988999999999999999999999846589999999999838024899
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76544444510065343210248864146789999860394311211013692788665499999999999998999999
Q 000884 1082 ARGAAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLADKLPELLDFSEDLTSLEPASKIQLKFLAEEMQALSKGLEKVVQ 1161 (1237)
Q Consensus 1082 ~rg~A~GFkL~sL~KL~dtKs~d~k~tLLh~lv~~l~e~~pell~f~~eL~~l~~Askv~l~~L~~ei~~l~k~l~kl~~ 1161 (1237)
+ +|.||+|++|.||.|||++|+++|||||||+++.+++|++++|.+||.+|+.|++++++.|..+++++.++++++++
T Consensus 235 ~--~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakv~~~~l~~d~~~L~~~l~~v~~ 312 (411)
T 1ux5_A 235 K--QAQGFKLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVER 312 (411)
T ss_dssp G--CCSCCCGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred C--CEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8--80576246888888700888985699999999998692021540035449999778999999999999999999999
Q ss_pred HHHCCC-CC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHHHHHC
Q ss_conf 851134-78---732245999999999999999999999999999999999977066999-99979999999997612
Q 000884 1162 ELSMSE-ND---GAISENFSKILREFLRFAEAEVRTLASLYSAVGRNVDALILYFGEDPA-RCPFEQAQIGVIRSADR 1234 (1237)
Q Consensus 1162 el~~s~-~d---~~~~d~F~~~l~~Fl~~a~~~i~~L~~~~~~~~~~~~~l~~yFGEd~~-~~~~e~~fs~l~~F~d~ 1234 (1237)
++.... .+ ....+.|..+|..|++.|+.++..|...+.++.+.|.+++.|||||++ ++..++||++|..|+..
T Consensus 313 ~l~~~~~s~~~~~~~~d~f~~~~~~fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~~fF~~~~~F~~~ 390 (411)
T 1ux5_A 313 SVEIGNLSDSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFFKKFADFINE 390 (411)
T ss_dssp HHHHSTTTCTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 998325775223585237899999999999999999999999999999999999488987878989999999999999
No 7
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=1.00 E-value=1 Score=492.35 Aligned_cols=301 Identities=25% Similarity=0.459 Sum_probs=290.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 98985112473111223312235778958999999601488899889999982299989999984002993324816899
Q 000884 934 PQSDKVQLIDHRRAYNCEIMLSKVKVPLPELMRSVLALEDSAIDADQVENLIKFCPTKEEMDLLKGYTGDKEKLGKCEQF 1013 (1237)
Q Consensus 934 ~k~~ki~iLd~kRa~Ni~I~L~klk~~~~ei~~ail~lD~~~L~~e~i~~Llk~~Pt~eE~~~Lk~~~~~~~~L~~~EqF 1013 (1237)
+|+++++|||.||||||+|+|++++++.++|+.+|+++|+.+|+.|.|+.|++++||.||+++|++|.++...|+.+|||
T Consensus 4 kk~~~i~vLD~kraqNi~I~L~~~k~~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~L~~~EqF 83 (340)
T 1v9d_A 4 KKVKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQF 83 (340)
T ss_dssp --CCCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTTTCCHHHHHHHHHHSCCHHHHHHHHTCGGGGGGSCHHHHH
T ss_pred CCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCHHHHH
T ss_conf 77780155477888589999800697999999999958820099999999970499989999999821884226889899
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf 99982676278889999899998998999999999999999999951789999999998413455468765444445100
Q 000884 1014 FLELMKVPRVESKLRVFSFKIQFHTQVSDLRSSLNVVNSAAEQVRNSAKLRRIMQTILSLGNALNQGTARGAAIGFRLDS 1093 (1237)
Q Consensus 1014 ~~~l~~vp~~~~rL~~l~fk~~f~~~i~~i~~~l~~l~~A~~el~~S~~L~~iL~~IL~lGN~LN~gt~rg~A~GFkL~s 1093 (1237)
+++++.||+++.||++|.|+.+|.+.+.+++..+..+..||++|++|++|+.+|++||++|||||+|+++|+|.||+|++
T Consensus 84 ~~~l~~ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~s 163 (340)
T 1v9d_A 84 GVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISF 163 (340)
T ss_dssp HHHHHTSTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC------------------------CC
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHH
T ss_conf 99997789779999999999668999999999999999999999848589999999999758578888877633431488
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 65343210248864146789999860394311211013692788665499999999999998999999851134787322
Q 000884 1094 LLKLTDTRARNNKMTLMHYLCKVLADKLPELLDFSEDLTSLEPASKIQLKFLAEEMQALSKGLEKVVQELSMSENDGAIS 1173 (1237)
Q Consensus 1094 L~KL~dtKs~d~k~tLLh~lv~~l~e~~pell~f~~eL~~l~~Askv~l~~L~~ei~~l~k~l~kl~~el~~s~~d~~~~ 1173 (1237)
|.||.|||++|+++|||||||+++.+++|++++|.+||.+|+.|++|+++.|..+++++.+++..++.++..........
T Consensus 164 L~KL~d~Ks~d~k~TLLh~lv~~~~~~~p~l~~f~~eL~~v~~Askvs~~~l~~~l~~l~~~~~~~~~~l~~~~~~~~~~ 243 (340)
T 1v9d_A 164 LCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEK 243 (340)
T ss_dssp HHHHHHSBCSSTTSBHHHHHHHHHHHSCCTTSSGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSSS
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 88655410789976299999999997390521663578859999757799999999999999999999998540355400
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 4599999999999999999999999999999999997706699999979999999997612
Q 000884 1174 ENFSKILREFLRFAEAEVRTLASLYSAVGRNVDALILYFGEDPARCPFEQAQIGVIRSADR 1234 (1237)
Q Consensus 1174 d~F~~~l~~Fl~~a~~~i~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~~fs~l~~F~d~ 1234 (1237)
+.|..+|..|+..|+.++..|+..+.++.+.|.+++.|||||++++..++||++|..|++.
T Consensus 244 d~f~~~m~~Fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~fF~~~~~F~~~ 304 (340)
T 1v9d_A 244 DKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNM 304 (340)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8899998889999999999999999999999999999829898879999999999999999
No 8
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=1.00 E-value=1 Score=490.08 Aligned_cols=303 Identities=22% Similarity=0.389 Sum_probs=259.1
Q ss_pred HHHHCCCCCCCCEEEEECCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCC
Q ss_conf 23310589999702350757996078789995145540378799999723099995899983777401332101233585
Q 000884 4 LRRLFFRKPPDGLLEISERVYVFNCCFTTDAWEEEDYKKYIGGIIGQLREHSPDSQFLVFNFREEETKSLMANVLSEFDI 83 (1237)
Q Consensus 4 ~r~~~~~~~~lDL~yIT~RIiam~~~fPa~~~~e~~YRn~i~~V~~~L~~~h~~~~y~V~Nl~~~~~~s~~~~~~s~~~~ 83 (1237)
.||+..++.+||++|||+||||| +||++++ |..|||++++|+.+|+++|+++ |+|||||+++.| ..+.|++
T Consensus 7 ~~r~~~~~~~ldl~~It~~li~~--~~P~~~~-e~l~r~~i~~Vv~~l~~~~~~~-~~v~nl~~e~~y-----~~~~~~~ 77 (324)
T 1d5r_A 7 KRRYQEDGFDLDLTYIYPNIIAM--GFPAERL-EGVYRNNIDDVVRFLDSKHKNH-YKIYNLCAERHY-----DTAKFNC 77 (324)
T ss_dssp -CCCCBTTTTBSEEEEETTEEEE--CCCBSSC-CTTCCCBHHHHHHHHHHHSSSC-EEEEEEESSCCC-----CTTSCSS
T ss_pred CCHHHCCCCCCCEEEECCCEEEE--ECCCCCC-HHHHCCCHHHHHHHHHHCCCCC-EEEEECCCCCCC-----CHHHHCC
T ss_conf 00453389552169980757899--6798742-4444168999999998518984-799985898889-----9488277
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH
Q ss_conf 18748789899996519999999999999997199809999963699651468899999997079999999999998550
Q 000884 84 TIMDYPRQYEGCPLLTMEVIHHFLRSTESWLSLGQHNVLMMHCERGGWPVLAFMLAALLIYRKQYSGEYKTLDMIYRQAP 163 (1237)
Q Consensus 84 ~V~~yP~~d~~~P~p~l~~l~~~~~~i~~WL~~d~~NVvviHCk~Gkgrt~g~~ia~~Lly~~~~~~~~~aL~~~~~~~~ 163 (1237)
++.+|+|.|+++| +++.+..||+.++.||..+++++|+|||++|+||| |+++||||++.+.+.+.++|+++|..++.
T Consensus 78 ~~~~~~~~D~~~P--~~~~l~~~~~~i~~~l~~~~~~~VlVHC~aG~gRT-Gt~ia~yL~~~~~~~~~~eal~~~~~~R~ 154 (324)
T 1d5r_A 78 RVAQYPFEDHNPP--QLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRT-GVMICAYLLHRGKFLKAQEALDFYGEVRT 154 (324)
T ss_dssp CEEEEEECTTSCC--CHHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHH-HHHHHHHHHHHTSCSSHHHHHHHHHHHHC
T ss_pred EEEEEEECCCCCC--CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH-HHHHHHHHHHHCCCCCHHHHHHHHHHHHC
T ss_conf 4999752599998--68999999999999997157980999899799726-99999999985578998999999998522
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCE
Q ss_conf 323125789999964999999999731378-8899986038976876426876899974039999826887435799808
Q 000884 164 RELLQLLSPLNPVPSQLRYLQYVSRRNVVS-EWPPLDRALTLDCVILRSIPNFDGQGGCRPIFRIYGQDPFVANDRSAKV 242 (1237)
Q Consensus 164 ~~~~~~v~~l~~~PSQ~RYv~Yf~~~~~~~-~~~p~~~~l~L~~I~l~~iP~f~~~~gcrp~~~Iy~~~~~~~~~~~~~~ 242 (1237)
.+ ..++ .+++|.|||+||+.++.+. .|+ .++++|++|+|+++|.|+ .+||+|+++||+++ .+
T Consensus 155 ~r-~~~v----~~~~Q~~yl~~~~~~l~~~~~~~--~~~l~l~~i~l~~ip~~~-~~~~~p~~~i~~~~---------~~ 217 (324)
T 1d5r_A 155 RD-KKGV----TIPSQRRYVYYYSYLLKNHLDYR--PVALLFHKMMFETIPMFS-GGTCNPQFVVCQLK---------VK 217 (324)
T ss_dssp SS-SCSS----CSHHHHHHHHHHHHHHHHTCCCC--CCEEEEEEEEESSCCCSB-TTBCCEEEEEEETT---------EE
T ss_pred CC-CCCC----CCHHHHHHHHHHHHHHHCCCCCC--CCCEEEEEEEEECCCCCC-CCCCCEEEEEEECC---------EE
T ss_conf 27-7888----89899999999999985589989--851588899995888446-89865599998087---------56
Q ss_pred EEECCCCCCCCEEECCCCCEEEEECC--CCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCC----------CEEEE
Q ss_conf 99646776430233135622899647--9610198599999358843455218999810432129----------96996
Q 000884 243 LYSTSKRSKAVRTYKQAECELVKIDI--NCCIQGDVVLECISLNDDLEREEMMFRVVFNTAFIRS----------NILML 310 (1237)
Q Consensus 243 l~st~~~~~~~~~y~~~d~~~i~~~~--~~~i~GDV~i~~~h~~~~~~~~~~ifr~~FnT~FI~~----------n~l~l 310 (1237)
+|++..... ..++..+.|++ ++.|+|||+|+|||.+.....+++||||||||+||.+ ++|+|
T Consensus 218 ~~~s~~~~~------~~~~~~~~~~~~~~~~l~GDv~i~~~~~~~~~~~~~~~f~~~FnT~fi~~~~~~~~~~~~~~l~~ 291 (324)
T 1d5r_A 218 IYSSNSGPT------RREDKFMYFEFPQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWVNTFFIPGPEEVDNDKEYLVLTL 291 (324)
T ss_dssp EEECCSSCS------EEETTEEEEEEEEEEEEESEEEEEEEECCTTCSSCEEEEEEEEEGGGCC--------CCSEEEEE
T ss_pred EEECCCCCC------CCCCCEEEEEECCCCEEECCEEEEEEECCCCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCEEEEE
T ss_conf 885786455------57896399992899466278899999699876677679999988265568565667775089993
Q ss_pred ECCCCCCCCCCC--CCCCCCCEEEEEEEECCCC
Q ss_conf 056685654577--9899995899999506866
Q 000884 311 NLDEVDILWNAK--ELFPKEFRAEILFSEMDAA 341 (1237)
Q Consensus 311 ~k~eLD~~~~~k--~~fp~dF~vel~F~~~~~~ 341 (1237)
+|+|||.+|++| ++|++||+|||+|++++++
T Consensus 292 ~k~elD~~~~~k~~~~f~~~f~v~l~f~~~~~~ 324 (324)
T 1d5r_A 292 TKNDLDKANKDKANRYFSPNFKVKLYFTKTVEE 324 (324)
T ss_dssp EGGGSTTGGGCTTCSSSCTTCEEEEEEEECC--
T ss_pred CHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCC
T ss_conf 278868876564234489986999999568889
No 9
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=1.00 E-value=1 Score=160.38 Aligned_cols=155 Identities=14% Similarity=0.123 Sum_probs=122.4
Q ss_pred EEEECCEEEEECCCCCC-----CCCHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCC-CHHHHHCCCCCCCCEEEECCC
Q ss_conf 23507579960787899-----951455403787999997230999958999837774-013321012335851874878
Q 000884 17 LEISERVYVFNCCFTTD-----AWEEEDYKKYIGGIIGQLREHSPDSQFLVFNFREEE-TKSLMANVLSEFDITIMDYPR 90 (1237)
Q Consensus 17 ~yIT~RIiam~~~fPa~-----~~~e~~YRn~i~~V~~~L~~~h~~~~y~V~Nl~~~~-~~s~~~~~~s~~~~~V~~yP~ 90 (1237)
.+|+.|+|+| .+|.. .+ +..||+.+++|+.||+.+|.+. +.|+||+.+. ++. ...+...+.++.++|+
T Consensus 40 ~~I~~rfia~--~~P~~~~~~~~v-~~~~r~~~~~v~~~l~~~~~~i-~~VInL~~e~~~y~--~~~~~~~gi~y~~~p~ 113 (241)
T 2c46_A 40 QPVAGRFLPL--KTMLGPRYDSQV-AEENRFHPSMLSNYLKSLKVKM-GLLVDLTNTSRFYD--RNDIEKEGIKYIKLQC 113 (241)
T ss_dssp CCBTTTEEEE--CCCCCGGGGGGS-CGGGCCCHHHHHHHHHHHTCEE-EEEEECSSCSCSSC--THHHHTTTCEEEECCC
T ss_pred CEECCCEEEE--CCCCCCCHHHHC-CHHHCCCHHHHHHHHHHHCCCC-CEEEECCCCCCCCC--HHHHHHCCCEEEEEEC
T ss_conf 9868838983--697643033204-2765299999999999717884-36665068888889--8999777987999752
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCC
Q ss_conf 98999965199999999999999971998099999636996514688999999970799999999999985503231257
Q 000884 91 QYEGCPLLTMEVIHHFLRSTESWLSLGQHNVLMMHCERGGWPVLAFMLAALLIYRKQYSGEYKTLDMIYRQAPRELLQLL 170 (1237)
Q Consensus 91 ~d~~~P~p~l~~l~~~~~~i~~WL~~d~~NVvviHCk~Gkgrt~g~~ia~~Lly~~~~~~~~~aL~~~~~~~~~~~~~~v 170 (1237)
.||+.+ |..+.|..|++.++.|+..++++.|+|||++|.||| |+||||||++...+ +.++|+++|.++++.. +
T Consensus 114 ~D~~~~-P~~~~l~~~~~~i~~~~~~~~~~~VlVHC~aG~gRT-Gt~ia~yLm~~~~~-s~~eAi~~vr~~R~~~----i 186 (241)
T 2c46_A 114 KGHGEC-PTTENTETFIRLCERFNERNPPELIGVHCTHGFNRT-GFLICAFLVEKMDW-SIEAAVATFAQARPPG----I 186 (241)
T ss_dssp CCTTCC-CCHHHHHHHHHHHTTC-----CEEEEEECSSSSHHH-HHHHHHHHHHTTCC-CHHHHHHHHHHHSTTC----C
T ss_pred CCCCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH-HHHHHHHHHHHHCC-CHHHHHHHHHHHCCCC----C
T ss_conf 798899-974999999999999998589980898789999899-99999999998199-9999999999778898----8
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 899999649999999997
Q 000884 171 SPLNPVPSQLRYLQYVSR 188 (1237)
Q Consensus 171 ~~l~~~PSQ~RYv~Yf~~ 188 (1237)
..+.|++++.-+..
T Consensus 187 ----~~~~~l~~L~~~~~ 200 (241)
T 2c46_A 187 ----YKGDYLKELFRRYG 200 (241)
T ss_dssp ----CCHHHHHHHHHHHS
T ss_pred ----CCHHHHHHHHHHHH
T ss_conf ----99999999999974
No 10
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=1.00 E-value=1 Score=142.94 Aligned_cols=152 Identities=15% Similarity=0.177 Sum_probs=119.4
Q ss_pred CCCCCCEEEEECCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEECC
Q ss_conf 89999702350757996078789995145540378799999723099995899983777401332101233585187487
Q 000884 10 RKPPDGLLEISERVYVFNCCFTTDAWEEEDYKKYIGGIIGQLREHSPDSQFLVFNFREEETKSLMANVLSEFDITIMDYP 89 (1237)
Q Consensus 10 ~~~~lDL~yIT~RIiam~~~fPa~~~~e~~YRn~i~~V~~~L~~~h~~~~y~V~Nl~~~~~~s~~~~~~s~~~~~V~~yP 89 (1237)
+-.++|++|++.|+|++ .+|.. +.+.+-..+|.++ + --.|+|||++.|+.. .+...+.++.++|
T Consensus 26 ~p~~~~~~~~~~r~I~t--q~P~~--------~t~~~~~~~L~~~-g--i~~Iv~l~~~~~~~~---~~~~~~i~~~~~p 89 (189)
T 3rz2_A 26 RPAPVEVTYKNMRFLIT--HNPTN--------ATLNKFIEELKKY-G--VTTIVRVCEATYDTT---LVEKEGIHVLDWP 89 (189)
T ss_dssp ---CCCEEETTEEEEEE--CCCCT--------TTHHHHHHHHHTT-T--EEEEEECSCCCSCCH---HHHHSSCEEEECC
T ss_pred CCCCEEEECCCCEEEEE--CCCCC--------CCHHHHHHHHHHC-C--CCEEEEECCCCCCHH---HHHHCCCEEEEEC
T ss_conf 99876552279728982--89984--------5499999999984-9--959998179767888---9987596899954
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCC
Q ss_conf 89899996519999999999999997199809999963699651468899999997079999999999998550323125
Q 000884 90 RQYEGCPLLTMEVIHHFLRSTESWLSLGQHNVLMMHCERGGWPVLAFMLAALLIYRKQYSGEYKTLDMIYRQAPRELLQL 169 (1237)
Q Consensus 90 ~~d~~~P~p~l~~l~~~~~~i~~WL~~d~~NVvviHCk~Gkgrt~g~~ia~~Lly~~~~~~~~~aL~~~~~~~~~~~~~~ 169 (1237)
+.|+..| ..+.+..|++.++.|+..+.++.|+|||.+|+||| |+++||||++.+. +.++|++++..+++ .
T Consensus 90 i~d~~~~--~~~~~~~~~~~i~~~~~~~~~~~VlVHC~aG~gRS-g~~va~~L~~~g~--~~~~a~~~vr~~R~-~---- 159 (189)
T 3rz2_A 90 FDDGAPP--SNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRA-PVLVALALIEGGM--KYEDAVQFIRQKRR-G---- 159 (189)
T ss_dssp CCSSSCC--CSHHHHHHHHHHHHHHHHSTTCEEEEECSSSSTTH-HHHHHHHHHTTTC--CHHHHHHHHHTTSS-S----
T ss_pred CCCCCCC--CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHH-HHHHHHHHHHCCC--CHHHHHHHHHHHCC-C----
T ss_conf 8999899--89999999999999997479980999899998889-9999999999399--99999999998786-8----
Q ss_pred CCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 7899999649999999997313
Q 000884 170 LSPLNPVPSQLRYLQYVSRRNV 191 (1237)
Q Consensus 170 v~~l~~~PSQ~RYv~Yf~~~~~ 191 (1237)
. ..+.|.+||++|+..+.
T Consensus 160 --~--v~~~Q~~~l~~~~~~lr 177 (189)
T 3rz2_A 160 --A--FNSKQLLYLEKYRPKMR 177 (189)
T ss_dssp --C--CCHHHHHHHHHCCCCCC
T ss_pred --C--CCHHHHHHHHHHHHHHC
T ss_conf --8--88999999999999836
Done!