Query 000889
Match_columns 1237
No_of_seqs 1215 out of 7655
Neff 9.0
Searched_HMMs 46136
Date Tue Apr 2 00:36:45 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000889.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000889hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3E-109 7E-114 1094.8 72.2 921 57-1211 28-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 9.4E-57 2E-61 594.9 35.8 518 225-823 70-588 (968)
3 KOG1187 Serine/threonine prote 100.0 3.2E-48 6.9E-53 444.3 27.9 292 914-1210 61-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 3.7E-44 8.1E-49 383.5 18.5 253 930-1204 81-336 (364)
5 KOG0595 Serine/threonine-prote 100.0 5.7E-43 1.2E-47 376.7 18.3 200 927-1137 9-217 (429)
6 KOG0575 Polo-like serine/threo 100.0 1.2E-42 2.5E-47 392.8 20.8 248 928-1203 18-269 (592)
7 KOG0192 Tyrosine kinase specif 100.0 2.9E-42 6.2E-47 391.4 23.9 257 932-1212 45-308 (362)
8 KOG0615 Serine/threonine prote 100.0 3.8E-43 8.3E-48 376.6 13.7 253 926-1203 170-437 (475)
9 KOG0197 Tyrosine kinases [Sign 100.0 2.9E-42 6.3E-47 386.9 18.8 256 932-1212 210-466 (468)
10 KOG0591 NIMA (never in mitosis 100.0 3.4E-43 7.4E-48 358.1 10.0 257 929-1204 20-282 (375)
11 KOG1026 Nerve growth factor re 100.0 2.7E-42 5.8E-47 405.1 17.2 269 927-1215 485-770 (774)
12 KOG0598 Ribosomal protein S6 k 100.0 5.2E-41 1.1E-45 359.5 16.7 250 927-1203 24-281 (357)
13 KOG0593 Predicted protein kina 100.0 8.8E-41 1.9E-45 344.0 15.2 264 928-1203 2-284 (396)
14 KOG0659 Cdk activating kinase 100.0 1.7E-39 3.6E-44 329.7 17.1 264 928-1203 2-281 (318)
15 KOG0578 p21-activated serine/t 100.0 2E-39 4.4E-44 363.7 18.3 250 928-1203 273-523 (550)
16 KOG0196 Tyrosine kinase, EPH ( 100.0 2.2E-40 4.9E-45 378.7 10.8 282 905-1211 606-895 (996)
17 KOG0592 3-phosphoinositide-dep 100.0 1.9E-39 4.2E-44 359.6 17.4 254 925-1204 70-339 (604)
18 KOG0616 cAMP-dependent protein 100.0 2.9E-39 6.2E-44 332.8 16.5 236 928-1194 44-283 (355)
19 KOG0198 MEKK and related serin 100.0 3.7E-39 8E-44 353.9 17.9 260 928-1209 17-282 (313)
20 KOG0661 MAPK related serine/th 100.0 1.1E-39 2.4E-44 356.1 12.9 264 927-1204 9-292 (538)
21 KOG0597 Serine-threonine prote 100.0 3.8E-39 8.2E-44 355.9 15.6 247 928-1203 2-251 (808)
22 KOG0582 Ste20-like serine/thre 100.0 3.1E-38 6.7E-43 342.1 22.1 262 928-1203 26-293 (516)
23 KOG4721 Serine/threonine prote 100.0 6.4E-39 1.4E-43 353.3 14.3 240 933-1207 129-368 (904)
24 KOG0472 Leucine-rich repeat pr 100.0 1.8E-42 4E-47 368.1 -13.3 498 221-816 42-561 (565)
25 KOG0600 Cdc2-related protein k 100.0 4E-38 8.6E-43 346.5 19.8 295 928-1233 117-432 (560)
26 KOG0193 Serine/threonine prote 100.0 2.2E-38 4.7E-43 355.3 17.1 257 930-1209 394-655 (678)
27 KOG1094 Discoidin domain recep 100.0 4.5E-38 9.7E-43 348.7 18.8 266 926-1207 536-804 (807)
28 KOG3653 Transforming growth fa 100.0 2E-37 4.4E-42 338.1 22.4 268 931-1213 213-509 (534)
29 KOG4194 Membrane glycoprotein 100.0 2.8E-39 6.1E-44 357.9 7.9 390 175-579 49-447 (873)
30 KOG0583 Serine/threonine prote 100.0 1.4E-37 3.1E-42 357.1 21.6 252 925-1203 14-275 (370)
31 KOG1095 Protein tyrosine kinas 100.0 8.2E-38 1.8E-42 381.1 19.0 271 929-1219 693-973 (1025)
32 KOG0201 Serine/threonine prote 100.0 2.1E-38 4.5E-43 343.9 11.7 248 929-1203 14-263 (467)
33 KOG4194 Membrane glycoprotein 100.0 5.2E-39 1.1E-43 355.8 5.9 394 275-768 53-448 (873)
34 KOG0194 Protein tyrosine kinas 100.0 8.3E-38 1.8E-42 357.8 15.6 260 930-1214 159-427 (474)
35 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.4E-37 1.2E-41 357.2 22.4 264 927-1209 6-336 (338)
36 KOG0605 NDR and related serine 100.0 6.2E-37 1.3E-41 340.7 20.4 254 926-1203 139-445 (550)
37 KOG0694 Serine/threonine prote 100.0 3E-37 6.6E-42 352.5 17.4 242 927-1197 367-613 (694)
38 KOG0574 STE20-like serine/thre 100.0 1.8E-38 4E-43 324.7 6.4 248 930-1203 35-283 (502)
39 KOG0611 Predicted serine/threo 100.0 2.5E-37 5.4E-42 328.1 14.6 248 927-1204 52-304 (668)
40 KOG2052 Activin A type IB rece 100.0 3.9E-36 8.4E-41 325.6 23.6 271 927-1213 210-509 (513)
41 KOG0585 Ca2+/calmodulin-depend 100.0 3.6E-37 7.7E-42 335.5 14.9 264 922-1209 91-378 (576)
42 cd05096 PTKc_DDR1 Catalytic do 100.0 2.9E-36 6.2E-41 345.7 23.2 266 928-1206 5-304 (304)
43 KOG0580 Serine/threonine prote 100.0 3.7E-37 7.9E-42 308.5 13.2 250 927-1204 21-274 (281)
44 KOG0588 Serine/threonine prote 100.0 7.8E-37 1.7E-41 345.4 17.5 249 927-1204 11-264 (786)
45 KOG0610 Putative serine/threon 100.0 1.5E-36 3.2E-41 326.8 18.0 253 929-1203 78-392 (459)
46 KOG0472 Leucine-rich repeat pr 100.0 3.8E-40 8.3E-45 350.4 -10.4 472 275-817 46-539 (565)
47 KOG0658 Glycogen synthase kina 100.0 3.1E-37 6.8E-42 329.5 11.4 267 929-1209 25-314 (364)
48 KOG2345 Serine/threonine prote 100.0 1.3E-36 2.9E-41 305.6 15.0 265 927-1208 20-301 (302)
49 KOG0660 Mitogen-activated prot 100.0 1.4E-36 3E-41 324.0 15.6 280 926-1216 20-325 (359)
50 PHA02988 hypothetical protein; 100.0 5E-36 1.1E-40 339.1 21.0 247 934-1209 26-281 (283)
51 cd05631 STKc_GRK4 Catalytic do 100.0 1E-35 2.2E-40 337.5 22.0 252 929-1203 1-261 (285)
52 KOG0033 Ca2+/calmodulin-depend 100.0 1.2E-37 2.5E-42 311.1 5.0 253 927-1204 10-268 (355)
53 KOG1989 ARK protein kinase fam 100.0 2.7E-36 5.9E-41 357.0 17.4 260 927-1210 36-314 (738)
54 cd05104 PTKc_Kit Catalytic dom 100.0 1.1E-35 2.4E-40 349.8 22.0 261 927-1206 34-373 (375)
55 KOG0589 Serine/threonine prote 100.0 1.9E-36 4.1E-41 339.7 14.2 251 928-1203 4-258 (426)
56 KOG0663 Protein kinase PITSLRE 100.0 4.9E-36 1.1E-40 313.2 15.6 259 929-1203 77-361 (419)
57 cd05106 PTKc_CSF-1R Catalytic 100.0 1.3E-35 2.9E-40 348.7 21.3 262 928-1208 38-373 (374)
58 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-35 2.3E-40 338.4 19.4 245 928-1203 1-254 (291)
59 KOG4257 Focal adhesion tyrosin 100.0 8.8E-36 1.9E-40 331.9 17.9 253 930-1209 391-651 (974)
60 PTZ00263 protein kinase A cata 100.0 1.2E-35 2.6E-40 343.8 19.8 245 928-1203 18-271 (329)
61 KOG1025 Epidermal growth facto 100.0 7.4E-36 1.6E-40 342.3 17.4 259 931-1214 699-964 (1177)
62 KOG0577 Serine/threonine prote 100.0 1.1E-36 2.4E-41 336.9 9.8 245 930-1204 28-279 (948)
63 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-35 3.5E-40 342.0 19.8 242 934-1203 1-251 (323)
64 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.1E-35 4.7E-40 342.8 20.6 253 928-1203 1-257 (333)
65 cd07848 STKc_CDKL5 Catalytic d 100.0 1.9E-35 4.2E-40 335.9 19.7 265 928-1203 1-284 (287)
66 cd06649 PKc_MEK2 Catalytic dom 100.0 2E-35 4.4E-40 342.4 20.2 284 927-1230 4-323 (331)
67 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.9E-35 4.1E-40 335.9 19.3 264 928-1203 5-285 (288)
68 PTZ00267 NIMA-related protein 100.0 2.8E-35 6E-40 356.8 22.0 254 929-1203 68-323 (478)
69 cd05048 PTKc_Ror Catalytic Dom 100.0 2.9E-35 6.2E-40 333.8 20.3 259 929-1207 6-283 (283)
70 PTZ00426 cAMP-dependent protei 100.0 2.5E-35 5.5E-40 341.6 19.5 245 928-1203 30-284 (340)
71 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.9E-35 1.1E-39 344.8 21.5 264 927-1209 36-399 (400)
72 cd05093 PTKc_TrkB Catalytic do 100.0 6.8E-35 1.5E-39 331.4 21.2 264 927-1210 4-282 (288)
73 cd05595 STKc_PKB_beta Catalyti 100.0 6E-35 1.3E-39 337.0 20.4 242 934-1203 1-251 (323)
74 KOG0594 Protein kinase PCTAIRE 100.0 2.9E-35 6.3E-40 316.1 16.4 270 929-1207 12-308 (323)
75 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.5E-35 1.2E-39 328.1 19.5 255 928-1207 5-265 (266)
76 cd06650 PKc_MEK1 Catalytic dom 100.0 1.6E-34 3.5E-39 334.8 23.9 200 927-1137 4-205 (333)
77 cd05049 PTKc_Trk Catalytic dom 100.0 9.2E-35 2E-39 329.1 21.1 259 928-1206 5-280 (280)
78 PF07714 Pkinase_Tyr: Protein 100.0 9.1E-35 2E-39 324.7 20.7 249 933-1204 4-259 (259)
79 cd05108 PTKc_EGFR Catalytic do 100.0 7.4E-35 1.6E-39 335.7 20.5 260 928-1212 7-273 (316)
80 cd08228 STKc_Nek6 Catalytic do 100.0 2E-34 4.3E-39 323.9 23.4 261 928-1208 2-266 (267)
81 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.1E-34 4.5E-39 321.6 23.2 250 929-1204 5-255 (256)
82 PHA03212 serine/threonine kina 100.0 1.7E-34 3.6E-39 340.3 23.5 261 927-1203 91-376 (391)
83 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.6E-35 1.4E-39 334.1 19.6 266 927-1203 4-288 (303)
84 cd05593 STKc_PKB_gamma Catalyt 100.0 9.4E-35 2E-39 336.0 21.0 242 934-1203 1-251 (328)
85 cd05072 PTKc_Lyn Catalytic dom 100.0 1.3E-34 2.8E-39 324.3 21.5 255 928-1207 6-261 (261)
86 cd05585 STKc_YPK1_like Catalyt 100.0 7.2E-35 1.6E-39 334.9 19.9 240 936-1203 1-247 (312)
87 KOG4278 Protein tyrosine kinas 100.0 4.4E-35 9.6E-40 325.0 16.9 256 930-1210 269-526 (1157)
88 cd05068 PTKc_Frk_like Catalyti 100.0 2E-34 4.3E-39 322.7 22.1 256 927-1207 5-261 (261)
89 cd05094 PTKc_TrkC Catalytic do 100.0 1.5E-34 3.2E-39 329.2 21.3 264 928-1211 5-286 (291)
90 KOG0599 Phosphorylase kinase g 100.0 2.2E-35 4.9E-40 299.0 12.5 254 926-1204 15-284 (411)
91 cd05584 STKc_p70S6K Catalytic 100.0 1.6E-34 3.6E-39 333.5 21.6 242 934-1203 2-256 (323)
92 PTZ00283 serine/threonine prot 100.0 9.4E-35 2E-39 351.8 20.3 257 926-1203 30-297 (496)
93 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.1E-34 2.4E-39 338.1 20.0 269 929-1209 1-298 (338)
94 cd05628 STKc_NDR1 Catalytic do 100.0 2.2E-34 4.8E-39 338.0 22.6 202 928-1137 1-239 (363)
95 cd05111 PTK_HER3 Pseudokinase 100.0 2.5E-34 5.4E-39 325.1 21.9 260 928-1212 7-273 (279)
96 cd05033 PTKc_EphR Catalytic do 100.0 4.1E-34 8.9E-39 321.2 23.4 256 928-1207 4-265 (266)
97 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.6E-34 3.4E-39 323.6 19.7 256 927-1207 5-261 (261)
98 cd05062 PTKc_IGF-1R Catalytic 100.0 1.7E-34 3.8E-39 326.2 20.2 261 926-1206 4-277 (277)
99 KOG0596 Dual specificity; seri 100.0 3.8E-35 8.2E-40 325.0 14.2 254 927-1203 360-627 (677)
100 cd05054 PTKc_VEGFR Catalytic d 100.0 1.6E-34 3.5E-39 335.0 20.1 263 928-1209 7-335 (337)
101 PLN00034 mitogen-activated pro 100.0 1.3E-34 2.9E-39 338.7 19.5 247 929-1203 75-328 (353)
102 cd07862 STKc_CDK6 Catalytic do 100.0 1.4E-34 3.1E-39 329.4 18.9 264 928-1203 1-287 (290)
103 cd05573 STKc_ROCK_NDR_like Cat 100.0 8.4E-35 1.8E-39 340.7 17.4 253 928-1203 1-285 (350)
104 cd05626 STKc_LATS2 Catalytic d 100.0 2.7E-34 5.8E-39 339.5 21.8 253 929-1203 2-305 (381)
105 cd05614 STKc_MSK2_N N-terminal 100.0 2.4E-34 5.2E-39 334.0 21.0 252 929-1203 1-267 (332)
106 cd05594 STKc_PKB_alpha Catalyt 100.0 1.4E-34 3E-39 334.6 18.4 242 934-1203 1-252 (325)
107 cd05590 STKc_nPKC_eta Catalyti 100.0 2.5E-34 5.4E-39 331.4 20.4 242 934-1203 1-253 (320)
108 cd05605 STKc_GRK4_like Catalyt 100.0 3.5E-34 7.5E-39 324.9 21.0 252 929-1203 1-261 (285)
109 cd05588 STKc_aPKC Catalytic do 100.0 4.8E-34 1E-38 330.4 22.6 249 934-1203 1-262 (329)
110 cd05596 STKc_ROCK Catalytic do 100.0 1.6E-34 3.4E-39 339.4 18.7 253 927-1203 42-304 (370)
111 cd05621 STKc_ROCK2 Catalytic d 100.0 1.4E-34 3.1E-39 339.1 18.4 254 926-1203 41-304 (370)
112 cd05618 STKc_aPKC_iota Catalyt 100.0 4.9E-34 1.1E-38 330.1 22.6 249 934-1203 1-262 (329)
113 cd05591 STKc_nPKC_epsilon Cata 100.0 2.8E-34 6E-39 331.5 20.4 242 934-1203 1-254 (321)
114 cd05599 STKc_NDR_like Catalyti 100.0 2.6E-34 5.7E-39 338.2 20.5 253 928-1203 1-296 (364)
115 cd05589 STKc_PKN Catalytic dom 100.0 2.6E-34 5.7E-39 332.2 20.2 245 930-1203 1-257 (324)
116 cd05045 PTKc_RET Catalytic dom 100.0 4.5E-34 9.8E-39 325.1 21.8 261 929-1209 1-288 (290)
117 cd05629 STKc_NDR_like_fungal C 100.0 1.3E-34 2.7E-39 342.2 17.8 253 928-1203 1-305 (377)
118 cd05090 PTKc_Ror1 Catalytic do 100.0 3.6E-34 7.9E-39 324.7 20.9 259 928-1206 5-282 (283)
119 cd05035 PTKc_Axl_like Catalyti 100.0 7.9E-34 1.7E-38 320.2 23.4 258 930-1207 1-272 (273)
120 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.4E-34 9.5E-39 318.8 20.8 251 929-1205 5-256 (256)
121 KOG0032 Ca2+/calmodulin-depend 100.0 4.5E-34 9.7E-39 327.5 21.1 252 926-1203 33-293 (382)
122 cd05592 STKc_nPKC_theta_delta 100.0 5.1E-34 1.1E-38 328.2 21.7 241 934-1202 1-247 (316)
123 cd05587 STKc_cPKC Catalytic do 100.0 4.4E-34 9.5E-39 330.3 21.1 247 929-1203 1-257 (324)
124 PRK13184 pknD serine/threonine 100.0 7E-34 1.5E-38 350.5 24.0 264 928-1209 2-292 (932)
125 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.5E-33 3.2E-38 316.8 24.4 261 928-1208 2-266 (267)
126 cd05053 PTKc_FGFR Catalytic do 100.0 5.1E-34 1.1E-38 325.3 20.8 262 927-1208 11-292 (293)
127 cd05097 PTKc_DDR_like Catalyti 100.0 6E-34 1.3E-38 324.9 21.4 265 928-1206 5-295 (295)
128 cd05101 PTKc_FGFR2 Catalytic d 100.0 9.3E-34 2E-38 324.8 23.0 264 927-1210 14-299 (304)
129 cd05043 PTK_Ryk Pseudokinase d 100.0 8.2E-34 1.8E-38 321.3 22.2 263 927-1209 5-278 (280)
130 cd06646 STKc_MAP4K5 Catalytic 100.0 7E-34 1.5E-38 319.4 21.5 254 928-1204 9-266 (267)
131 cd05051 PTKc_DDR Catalytic dom 100.0 7E-34 1.5E-38 324.7 21.8 267 927-1206 4-296 (296)
132 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 8.8E-34 1.9E-38 319.0 22.3 256 934-1205 1-268 (269)
133 cd05608 STKc_GRK1 Catalytic do 100.0 6.1E-34 1.3E-38 322.1 21.1 248 936-1203 1-257 (280)
134 cd05052 PTKc_Abl Catalytic dom 100.0 9.1E-34 2E-38 317.7 22.1 254 929-1207 7-262 (263)
135 cd05601 STKc_CRIK Catalytic do 100.0 3.2E-34 7E-39 332.6 19.0 253 928-1203 1-263 (330)
136 cd05075 PTKc_Axl Catalytic dom 100.0 1.1E-33 2.4E-38 318.8 22.8 258 930-1207 1-271 (272)
137 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.2E-34 9.2E-39 323.0 19.3 260 927-1206 5-277 (277)
138 cd05071 PTKc_Src Catalytic dom 100.0 9.4E-34 2E-38 317.3 21.8 254 928-1207 6-260 (262)
139 KOG4279 Serine/threonine prote 100.0 1.1E-34 2.3E-39 326.0 13.9 245 935-1203 582-832 (1226)
140 cd05620 STKc_nPKC_delta Cataly 100.0 6.5E-34 1.4E-38 327.3 20.9 241 934-1202 1-247 (316)
141 cd08229 STKc_Nek7 Catalytic do 100.0 1.3E-33 2.8E-38 317.3 22.8 261 928-1208 2-266 (267)
142 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.9E-34 1.1E-38 336.1 20.2 261 929-1208 38-400 (401)
143 cd05619 STKc_nPKC_theta Cataly 100.0 8.6E-34 1.9E-38 326.1 21.5 241 934-1202 1-247 (316)
144 cd05095 PTKc_DDR2 Catalytic do 100.0 1.7E-33 3.7E-38 321.3 23.8 267 927-1206 4-296 (296)
145 cd05616 STKc_cPKC_beta Catalyt 100.0 5.9E-34 1.3E-38 329.0 20.2 247 929-1203 1-257 (323)
146 cd05109 PTKc_HER2 Catalytic do 100.0 1.1E-33 2.4E-38 320.0 22.0 259 928-1211 7-272 (279)
147 cd05084 PTKc_Fes Catalytic dom 100.0 6E-34 1.3E-38 317.0 19.5 249 934-1206 1-252 (252)
148 cd05059 PTKc_Tec_like Catalyti 100.0 8E-34 1.7E-38 316.8 20.5 250 929-1204 5-255 (256)
149 cd05625 STKc_LATS1 Catalytic d 100.0 5.5E-34 1.2E-38 337.3 20.2 201 929-1137 2-251 (382)
150 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 9.6E-34 2.1E-38 321.2 21.3 268 930-1208 6-282 (283)
151 PHA03211 serine/threonine kina 100.0 3.6E-33 7.8E-38 332.3 27.1 195 927-1135 168-363 (461)
152 KOG0579 Ste20-like serine/thre 100.0 2.6E-35 5.6E-40 327.5 8.1 250 930-1203 34-289 (1187)
153 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.3E-33 2.8E-38 326.6 22.6 249 934-1203 1-260 (327)
154 cd05598 STKc_LATS Catalytic do 100.0 4.9E-34 1.1E-38 337.2 19.4 253 928-1203 1-301 (376)
155 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-33 2.6E-38 322.3 21.7 250 928-1203 20-270 (296)
156 cd05570 STKc_PKC Catalytic dom 100.0 8.7E-34 1.9E-38 326.7 20.6 242 934-1203 1-252 (318)
157 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.9E-33 6.2E-38 313.1 24.2 253 928-1206 6-259 (260)
158 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.5E-33 3.3E-38 323.5 22.4 263 928-1210 18-302 (307)
159 cd05091 PTKc_Ror2 Catalytic do 100.0 5.4E-34 1.2E-38 323.4 18.4 258 929-1206 6-282 (283)
160 cd05607 STKc_GRK7 Catalytic do 100.0 1.5E-33 3.2E-38 318.4 21.6 247 936-1204 1-251 (277)
161 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.5E-34 1.4E-38 326.9 19.0 264 928-1203 6-286 (309)
162 cd05032 PTKc_InsR_like Catalyt 100.0 8.1E-34 1.8E-38 320.8 19.4 259 928-1206 6-277 (277)
163 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.4E-33 5.2E-38 326.6 23.8 263 928-1209 7-341 (343)
164 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 8.5E-34 1.8E-38 321.9 19.4 264 928-1208 4-284 (284)
165 PTZ00036 glycogen synthase kin 100.0 5.7E-34 1.2E-38 341.2 18.9 262 927-1203 65-351 (440)
166 cd05092 PTKc_TrkA Catalytic do 100.0 1.6E-33 3.4E-38 318.8 21.5 259 928-1206 5-280 (280)
167 KOG0199 ACK and related non-re 100.0 1.3E-34 2.9E-39 326.6 12.5 250 931-1204 113-369 (1039)
168 cd05042 PTKc_Aatyk Catalytic d 100.0 1.7E-33 3.7E-38 316.6 21.5 255 935-1205 2-268 (269)
169 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.8E-33 3.9E-38 323.9 21.8 268 928-1215 12-301 (314)
170 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.8E-33 6.1E-38 313.2 22.8 254 927-1206 5-259 (260)
171 cd05582 STKc_RSK_N N-terminal 100.0 4.4E-34 9.6E-39 329.5 16.7 238 934-1199 2-245 (318)
172 cd05622 STKc_ROCK1 Catalytic d 100.0 1.6E-33 3.5E-38 330.6 21.7 256 925-1204 40-305 (371)
173 cd05055 PTKc_PDGFR Catalytic d 100.0 1.1E-33 2.4E-38 323.4 19.8 258 928-1207 35-301 (302)
174 cd08529 STKc_FA2-like Catalyti 100.0 2.6E-33 5.7E-38 312.6 22.2 250 929-1203 1-253 (256)
175 PHA03207 serine/threonine kina 100.0 1.5E-33 3.3E-38 334.0 21.4 263 927-1203 91-375 (392)
176 cd05575 STKc_SGK Catalytic dom 100.0 9.1E-34 2E-38 327.5 19.1 237 934-1198 1-242 (323)
177 PF00069 Pkinase: Protein kina 100.0 9.3E-34 2E-38 317.0 18.5 253 930-1203 1-257 (260)
178 cd06619 PKc_MKK5 Catalytic dom 100.0 4.2E-33 9.1E-38 315.2 23.9 250 929-1204 2-254 (279)
179 cd05061 PTKc_InsR Catalytic do 100.0 1.7E-33 3.8E-38 319.9 20.9 263 927-1209 5-280 (288)
180 cd05630 STKc_GRK6 Catalytic do 100.0 3.1E-33 6.8E-38 317.0 22.9 251 930-1203 2-261 (285)
181 cd05050 PTKc_Musk Catalytic do 100.0 1.4E-33 3.1E-38 320.8 20.0 260 927-1206 4-288 (288)
182 cd05089 PTKc_Tie1 Catalytic do 100.0 4.1E-33 8.9E-38 318.3 23.7 262 928-1212 2-280 (297)
183 cd06625 STKc_MEKK3_like Cataly 100.0 6.6E-33 1.4E-37 310.8 24.8 252 928-1203 2-260 (263)
184 cd05069 PTKc_Yes Catalytic dom 100.0 3.3E-33 7.2E-38 312.6 22.0 253 928-1206 6-259 (260)
185 cd05615 STKc_cPKC_alpha Cataly 100.0 1.9E-33 4.1E-38 324.5 20.6 241 929-1197 1-246 (323)
186 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.6E-33 7.7E-38 324.3 23.1 263 929-1211 13-297 (334)
187 cd06656 STKc_PAK3 Catalytic do 100.0 2.8E-33 6.1E-38 319.4 21.8 250 928-1203 19-269 (297)
188 PHA03209 serine/threonine kina 100.0 6.7E-33 1.4E-37 324.3 25.3 193 925-1134 63-256 (357)
189 cd05597 STKc_DMPK_like Catalyt 100.0 2.5E-33 5.3E-38 324.7 21.4 201 928-1136 1-210 (331)
190 cd05088 PTKc_Tie2 Catalytic do 100.0 3.1E-33 6.7E-38 320.1 21.9 261 928-1211 7-284 (303)
191 cd06643 STKc_SLK Catalytic dom 100.0 2E-33 4.4E-38 318.4 20.2 251 930-1204 7-263 (282)
192 cd05602 STKc_SGK1 Catalytic do 100.0 1.2E-33 2.6E-38 326.7 18.6 240 934-1201 1-245 (325)
193 cd05034 PTKc_Src_like Catalyti 100.0 3.4E-33 7.3E-38 312.8 21.5 255 927-1206 5-260 (261)
194 KOG4717 Serine/threonine prote 100.0 8.9E-34 1.9E-38 309.2 16.1 249 927-1203 17-270 (864)
195 cd06655 STKc_PAK2 Catalytic do 100.0 2.5E-33 5.4E-38 319.6 20.6 250 928-1203 19-269 (296)
196 cd06615 PKc_MEK Catalytic doma 100.0 3.6E-33 7.8E-38 320.3 21.8 262 928-1204 1-288 (308)
197 cd07876 STKc_JNK2 Catalytic do 100.0 3.8E-33 8.2E-38 327.4 22.4 198 926-1137 19-225 (359)
198 cd07853 STKc_NLK Catalytic dom 100.0 3.2E-33 6.9E-38 329.5 21.8 263 929-1203 1-288 (372)
199 cd05116 PTKc_Syk Catalytic dom 100.0 3.4E-33 7.4E-38 311.9 20.9 247 935-1207 2-255 (257)
200 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-33 3.5E-38 325.3 18.6 237 934-1198 1-242 (321)
201 cd00192 PTKc Catalytic domain 100.0 9.8E-33 2.1E-37 308.9 24.5 252 934-1205 1-262 (262)
202 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.5E-33 9.8E-38 313.1 21.8 256 928-1207 5-267 (268)
203 cd06612 STKc_MST1_2 Catalytic 100.0 4.4E-33 9.5E-38 310.8 21.5 250 928-1203 3-253 (256)
204 cd05632 STKc_GRK5 Catalytic do 100.0 6.3E-33 1.4E-37 314.7 23.1 251 930-1203 2-261 (285)
205 cd06644 STKc_STK10_LOK Catalyt 100.0 4.3E-33 9.3E-38 317.4 21.7 252 928-1203 12-269 (292)
206 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.5E-33 5.5E-38 313.7 19.3 239 934-1204 1-261 (262)
207 cd05039 PTKc_Csk_like Catalyti 100.0 6.8E-33 1.5E-37 309.3 22.7 250 928-1207 6-256 (256)
208 cd05604 STKc_SGK3 Catalytic do 100.0 1.3E-33 2.9E-38 326.4 17.5 238 934-1199 1-243 (325)
209 KOG1024 Receptor-like protein 100.0 2E-33 4.4E-38 298.2 17.1 271 920-1210 276-558 (563)
210 cd05627 STKc_NDR2 Catalytic do 100.0 9.9E-34 2.1E-38 332.3 16.5 202 928-1137 1-239 (360)
211 cd06631 STKc_YSK4 Catalytic do 100.0 4.5E-33 9.7E-38 312.5 21.0 252 929-1203 1-262 (265)
212 KOG0690 Serine/threonine prote 100.0 3E-34 6.6E-39 297.0 10.5 249 927-1203 167-424 (516)
213 cd05040 PTKc_Ack_like Catalyti 100.0 3.6E-33 7.9E-38 311.7 20.1 249 934-1205 1-256 (257)
214 cd05065 PTKc_EphR_B Catalytic 100.0 6E-33 1.3E-37 312.2 21.8 255 929-1207 5-268 (269)
215 cd05082 PTKc_Csk Catalytic dom 100.0 6.8E-33 1.5E-37 309.4 21.9 249 928-1207 6-256 (256)
216 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.5E-33 7.7E-38 316.7 19.9 261 929-1207 5-283 (284)
217 cd06611 STKc_SLK_like Catalyti 100.0 2.3E-33 5.1E-38 317.6 18.3 252 928-1203 5-262 (280)
218 cd06637 STKc_TNIK Catalytic do 100.0 2.7E-33 5.9E-38 315.6 18.7 253 926-1203 4-269 (272)
219 cd05057 PTKc_EGFR_like Catalyt 100.0 1.1E-32 2.3E-37 312.0 23.5 260 928-1212 7-273 (279)
220 cd06645 STKc_MAP4K3 Catalytic 100.0 3.3E-33 7.2E-38 314.0 19.3 253 928-1203 9-265 (267)
221 cd05066 PTKc_EphR_A Catalytic 100.0 8.5E-33 1.8E-37 310.6 22.4 256 928-1207 4-266 (267)
222 cd05073 PTKc_Hck Catalytic dom 100.0 6.4E-33 1.4E-37 310.3 21.3 254 927-1206 5-259 (260)
223 cd08219 STKc_Nek3 Catalytic do 100.0 1E-32 2.2E-37 307.7 22.8 250 929-1203 1-252 (255)
224 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-32 2.6E-37 307.3 23.3 248 935-1207 2-255 (257)
225 cd05624 STKc_MRCK_beta Catalyt 100.0 3.2E-33 7E-38 323.8 19.3 255 928-1203 1-266 (331)
226 cd07878 STKc_p38beta_MAPK11 Ca 100.0 9.6E-33 2.1E-37 322.1 23.3 262 925-1203 12-298 (343)
227 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-32 2.5E-37 317.9 23.7 199 933-1137 6-219 (317)
228 KOG0983 Mitogen-activated prot 100.0 3.7E-34 8E-39 290.6 9.7 271 932-1228 96-372 (391)
229 cd05060 PTKc_Syk_like Catalyti 100.0 1.2E-32 2.7E-37 307.4 23.1 249 934-1208 1-256 (257)
230 cd05085 PTKc_Fer Catalytic dom 100.0 1.2E-32 2.5E-37 306.2 22.8 247 934-1205 1-249 (250)
231 cd07863 STKc_CDK4 Catalytic do 100.0 4.7E-33 1E-37 316.5 20.0 263 929-1203 1-285 (288)
232 cd06613 STKc_MAP4K3_like Catal 100.0 9.8E-33 2.1E-37 309.2 22.2 254 928-1203 3-260 (262)
233 cd07874 STKc_JNK3 Catalytic do 100.0 3.9E-33 8.4E-38 326.9 19.6 262 926-1203 15-311 (355)
234 cd05623 STKc_MRCK_alpha Cataly 100.0 5.2E-33 1.1E-37 322.4 20.3 255 928-1203 1-266 (332)
235 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-32 3.3E-37 309.0 23.6 252 934-1208 1-269 (270)
236 cd05112 PTKc_Itk Catalytic dom 100.0 2E-32 4.4E-37 305.5 24.2 251 928-1204 4-255 (256)
237 cd08221 STKc_Nek9 Catalytic do 100.0 1E-32 2.3E-37 307.8 21.6 251 929-1204 1-254 (256)
238 PTZ00266 NIMA-related protein 100.0 7.4E-33 1.6E-37 342.4 22.3 257 926-1203 11-295 (1021)
239 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.2E-33 9.2E-38 318.9 18.7 263 928-1203 6-286 (301)
240 cd05041 PTKc_Fes_like Catalyti 100.0 9.5E-33 2.1E-37 307.2 21.0 248 934-1205 1-250 (251)
241 cd06624 STKc_ASK Catalytic dom 100.0 1E-32 2.2E-37 310.2 21.3 255 925-1203 5-265 (268)
242 cd07861 STKc_CDK1_euk Catalyti 100.0 1.2E-32 2.5E-37 312.8 22.0 263 929-1203 1-282 (285)
243 cd07875 STKc_JNK1 Catalytic do 100.0 9.1E-33 2E-37 324.8 21.7 262 926-1203 22-318 (364)
244 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-32 2.6E-37 309.5 21.6 250 929-1203 1-264 (267)
245 cd06638 STKc_myosinIIIA Cataly 100.0 7.1E-33 1.5E-37 314.7 19.9 262 921-1204 11-284 (286)
246 cd05110 PTKc_HER4 Catalytic do 100.0 1.5E-32 3.2E-37 314.6 22.6 260 928-1212 7-273 (303)
247 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.8E-32 3.9E-37 311.4 22.9 254 928-1203 1-262 (286)
248 cd05056 PTKc_FAK Catalytic dom 100.0 1.5E-32 3.2E-37 309.2 21.6 257 928-1210 6-268 (270)
249 cd06609 STKc_MST3_like Catalyt 100.0 1.2E-32 2.6E-37 310.7 20.9 249 928-1203 1-251 (274)
250 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.9E-32 6.3E-37 306.4 23.8 254 935-1205 2-267 (268)
251 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.8E-32 4E-37 310.9 22.0 260 928-1208 5-271 (284)
252 cd08227 PK_STRAD_alpha Pseudok 100.0 1.6E-32 3.5E-37 317.7 21.7 199 932-1136 2-212 (327)
253 cd06658 STKc_PAK5 Catalytic do 100.0 5.9E-33 1.3E-37 315.8 17.5 246 932-1203 26-272 (292)
254 KOG0666 Cyclin C-dependent kin 100.0 3.7E-33 7.9E-38 288.2 14.0 210 926-1139 22-245 (438)
255 cd06647 STKc_PAK_I Catalytic d 100.0 2.4E-32 5.2E-37 311.1 22.4 250 928-1203 19-269 (293)
256 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.6E-32 7.9E-37 308.9 23.8 264 928-1203 1-283 (286)
257 KOG0618 Serine/threonine phosp 100.0 1.4E-35 3.1E-40 346.5 -4.6 380 226-641 47-428 (1081)
258 KOG0667 Dual-specificity tyros 100.0 7.7E-33 1.7E-37 317.5 17.9 197 929-1138 187-392 (586)
259 cd06659 STKc_PAK6 Catalytic do 100.0 1.2E-32 2.6E-37 314.1 19.5 246 932-1203 25-271 (297)
260 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 9.9E-33 2.1E-37 313.2 18.7 262 928-1207 4-283 (284)
261 cd05044 PTKc_c-ros Catalytic d 100.0 2.3E-32 5E-37 307.5 21.5 252 935-1206 2-269 (269)
262 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-32 3.1E-37 307.3 19.6 238 934-1205 1-259 (259)
263 PTZ00284 protein kinase; Provi 100.0 1.2E-32 2.7E-37 333.8 20.6 263 924-1203 125-438 (467)
264 cd05058 PTKc_Met_Ron Catalytic 100.0 3.1E-32 6.8E-37 305.1 22.2 252 934-1209 1-261 (262)
265 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-32 2.8E-37 311.9 19.2 261 918-1203 6-279 (282)
266 cd06639 STKc_myosinIIIB Cataly 100.0 1.6E-32 3.6E-37 312.5 20.2 262 920-1203 14-287 (291)
267 cd05586 STKc_Sck1_like Catalyt 100.0 4.2E-33 9.1E-38 323.1 15.5 241 936-1203 1-253 (330)
268 cd08223 STKc_Nek4 Catalytic do 100.0 3.2E-32 6.9E-37 304.1 22.0 250 929-1203 1-254 (257)
269 cd08528 STKc_Nek10 Catalytic d 100.0 2.4E-32 5.1E-37 307.4 21.1 255 929-1205 1-268 (269)
270 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.4E-32 3.1E-37 309.7 19.2 239 935-1205 2-274 (274)
271 KOG0584 Serine/threonine prote 100.0 3E-33 6.5E-38 317.0 13.5 244 933-1203 45-296 (632)
272 cd06632 STKc_MEKK1_plant Catal 100.0 3.5E-32 7.5E-37 303.9 21.9 248 929-1203 1-255 (258)
273 cd06630 STKc_MEKK1 Catalytic d 100.0 2.9E-32 6.2E-37 306.6 21.1 254 929-1203 1-264 (268)
274 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.1E-32 6.8E-37 307.0 21.5 255 929-1203 2-269 (272)
275 cd05609 STKc_MAST Catalytic do 100.0 2.2E-32 4.7E-37 313.6 20.2 255 928-1205 1-272 (305)
276 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.9E-32 8.3E-37 305.2 21.8 259 928-1203 1-264 (267)
277 cd07839 STKc_CDK5 Catalytic do 100.0 2.2E-32 4.8E-37 310.3 20.0 264 929-1203 1-281 (284)
278 cd07867 STKc_CDC2L6 Catalytic 100.0 2.9E-32 6.3E-37 314.7 21.3 198 934-1137 7-219 (317)
279 cd06651 STKc_MEKK3 Catalytic d 100.0 3.6E-32 7.8E-37 305.4 21.3 251 928-1203 2-261 (266)
280 cd05046 PTK_CCK4 Pseudokinase 100.0 1.9E-32 4.1E-37 309.3 18.9 258 928-1205 5-274 (275)
281 cd08218 STKc_Nek1 Catalytic do 100.0 2.8E-32 6.2E-37 304.3 20.1 250 929-1203 1-253 (256)
282 cd06640 STKc_MST4 Catalytic do 100.0 5.4E-32 1.2E-36 305.9 22.5 249 929-1205 5-255 (277)
283 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.6E-32 3.4E-37 310.2 18.2 246 930-1203 6-253 (277)
284 cd05574 STKc_phototropin_like 100.0 3.8E-32 8.3E-37 313.4 21.7 254 928-1203 1-289 (316)
285 KOG4250 TANK binding protein k 100.0 8.3E-33 1.8E-37 317.0 15.8 271 929-1207 14-310 (732)
286 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.1E-32 8.9E-37 306.2 21.4 258 930-1207 1-272 (273)
287 smart00219 TyrKc Tyrosine kina 100.0 5.6E-32 1.2E-36 302.2 22.3 251 930-1204 1-258 (258)
288 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.3E-32 5.1E-37 310.5 19.4 261 928-1203 1-283 (286)
289 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.2E-32 4.7E-37 305.6 18.5 239 935-1205 2-258 (258)
290 cd06635 STKc_TAO1 Catalytic do 100.0 6.1E-32 1.3E-36 311.5 22.8 273 930-1232 27-306 (317)
291 cd06608 STKc_myosinIII_like Ca 100.0 4.3E-32 9.3E-37 306.3 20.7 256 926-1203 4-272 (275)
292 KOG1006 Mitogen-activated prot 100.0 3.4E-34 7.4E-39 290.1 2.9 254 933-1203 69-327 (361)
293 cd06605 PKc_MAPKK Catalytic do 100.0 4.6E-32 1E-36 304.3 20.5 254 928-1203 1-257 (265)
294 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.3E-31 2.7E-36 304.5 24.3 262 928-1203 1-266 (287)
295 KOG4645 MAPKKK (MAP kinase kin 100.0 6.3E-34 1.4E-38 343.0 5.6 253 927-1203 1234-1494(1509)
296 cd07832 STKc_CCRK Catalytic do 100.0 3.1E-32 6.7E-37 309.4 19.2 261 929-1203 1-282 (286)
297 cd08220 STKc_Nek8 Catalytic do 100.0 1.1E-31 2.4E-36 299.5 23.3 249 929-1203 1-253 (256)
298 KOG0986 G protein-coupled rece 100.0 3.4E-33 7.4E-38 302.2 10.6 201 927-1136 184-388 (591)
299 cd07842 STKc_CDK8_like Catalyt 100.0 9.9E-32 2.1E-36 310.1 23.3 206 929-1138 1-220 (316)
300 cd06648 STKc_PAK_II Catalytic 100.0 5.7E-32 1.2E-36 306.8 20.9 248 930-1203 21-269 (285)
301 KOG0444 Cytoskeletal regulator 100.0 8.1E-35 1.7E-39 323.3 -2.4 373 298-801 6-380 (1255)
302 cd07841 STKc_CDK7 Catalytic do 100.0 6.1E-32 1.3E-36 309.0 21.3 263 929-1203 1-282 (298)
303 cd05083 PTKc_Chk Catalytic dom 100.0 3.6E-32 7.9E-37 303.1 19.0 247 928-1206 6-253 (254)
304 cd06652 STKc_MEKK2 Catalytic d 100.0 6.7E-32 1.4E-36 303.0 21.2 251 928-1203 2-261 (265)
305 cd07844 STKc_PCTAIRE_like Cata 100.0 4.7E-32 1E-36 308.8 20.0 265 928-1203 5-288 (291)
306 cd07833 STKc_CDKL Catalytic do 100.0 3E-32 6.5E-37 309.9 18.3 265 928-1203 1-285 (288)
307 KOG0618 Serine/threonine phosp 100.0 4.1E-35 8.8E-40 342.7 -5.4 462 226-795 23-488 (1081)
308 KOG0444 Cytoskeletal regulator 100.0 8.7E-35 1.9E-39 323.1 -2.7 363 227-608 10-375 (1255)
309 cd05580 STKc_PKA Catalytic dom 100.0 7.6E-32 1.7E-36 306.7 21.4 245 928-1203 1-254 (290)
310 cd06917 STKc_NAK1_like Catalyt 100.0 9.2E-32 2E-36 304.0 21.6 248 929-1203 2-255 (277)
311 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.9E-32 1.3E-36 307.9 20.1 264 926-1203 3-288 (291)
312 cd06626 STKc_MEKK4 Catalytic d 100.0 1E-31 2.3E-36 301.2 21.8 253 929-1203 1-261 (264)
313 PHA03210 serine/threonine kina 100.0 3.8E-32 8.3E-37 330.3 19.7 273 926-1203 146-454 (501)
314 cd08217 STKc_Nek2 Catalytic do 100.0 1.1E-31 2.4E-36 301.0 21.6 252 929-1203 1-262 (265)
315 cd07860 STKc_CDK2_3 Catalytic 100.0 9.9E-32 2.1E-36 305.0 21.0 262 929-1203 1-281 (284)
316 cd06623 PKc_MAPKK_plant_like C 100.0 1.7E-31 3.6E-36 299.5 22.3 253 928-1203 1-256 (264)
317 cd05578 STKc_Yank1 Catalytic d 100.0 7.6E-32 1.7E-36 301.3 19.4 247 929-1201 1-253 (258)
318 cd07837 STKc_CdkB_plant Cataly 100.0 8.1E-32 1.7E-36 307.5 20.0 268 928-1203 1-291 (295)
319 cd06617 PKc_MKK3_6 Catalytic d 100.0 8.7E-32 1.9E-36 305.3 19.9 254 928-1203 1-261 (283)
320 cd06614 STKc_PAK Catalytic dom 100.0 1.3E-31 2.7E-36 304.4 21.1 253 926-1203 17-270 (286)
321 KOG1035 eIF-2alpha kinase GCN2 100.0 1.2E-32 2.5E-37 330.8 13.0 252 928-1203 479-871 (1351)
322 PHA02882 putative serine/threo 100.0 2.9E-31 6.4E-36 302.2 23.9 259 928-1205 12-294 (294)
323 cd05122 PKc_STE Catalytic doma 100.0 2.1E-31 4.6E-36 296.2 21.2 250 929-1203 1-251 (253)
324 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-31 2.3E-36 305.4 19.2 257 929-1203 5-267 (288)
325 cd07849 STKc_ERK1_2_like Catal 100.0 8.9E-32 1.9E-36 312.8 18.9 271 927-1209 4-300 (336)
326 KOG0612 Rho-associated, coiled 100.0 8.1E-33 1.8E-37 329.3 10.3 258 923-1204 70-339 (1317)
327 cd06607 STKc_TAO Catalytic dom 100.0 2.5E-31 5.3E-36 305.2 21.9 248 928-1205 15-269 (307)
328 KOG0607 MAP kinase-interacting 100.0 3.4E-32 7.4E-37 281.8 13.1 262 934-1203 84-361 (463)
329 cd07843 STKc_CDC2L1 Catalytic 100.0 2.2E-31 4.7E-36 303.6 20.8 264 928-1203 5-290 (293)
330 cd06641 STKc_MST3 Catalytic do 100.0 5.7E-31 1.2E-35 297.5 23.9 246 930-1203 6-253 (277)
331 cd06606 STKc_MAPKKK Catalytic 100.0 7.4E-31 1.6E-35 293.1 23.6 252 929-1203 1-257 (260)
332 cd07836 STKc_Pho85 Catalytic d 100.0 2.8E-31 6E-36 301.3 20.3 264 929-1203 1-281 (284)
333 cd07845 STKc_CDK10 Catalytic d 100.0 1.7E-31 3.8E-36 306.8 18.8 265 927-1203 6-290 (309)
334 cd06657 STKc_PAK4 Catalytic do 100.0 2.3E-31 5.1E-36 302.6 19.5 244 934-1203 26-270 (292)
335 cd08225 STKc_Nek5 Catalytic do 100.0 3.2E-31 6.8E-36 296.0 20.1 250 929-1203 1-254 (257)
336 cd07831 STKc_MOK Catalytic dom 100.0 5.2E-31 1.1E-35 298.7 21.8 259 930-1203 1-279 (282)
337 cd07865 STKc_CDK9 Catalytic do 100.0 2.8E-31 6.1E-36 305.4 19.8 266 927-1203 11-307 (310)
338 KOG0586 Serine/threonine prote 100.0 2.1E-31 4.5E-36 302.0 18.0 250 927-1205 55-308 (596)
339 KOG0200 Fibroblast/platelet-de 100.0 3.7E-31 8E-36 326.0 21.6 258 930-1207 298-579 (609)
340 cd07835 STKc_CDK1_like Catalyt 100.0 8.7E-31 1.9E-35 297.0 23.1 261 930-1203 1-280 (283)
341 cd05633 STKc_GRK3 Catalytic do 100.0 5.5E-31 1.2E-35 297.6 21.3 242 935-1203 1-255 (279)
342 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.1E-31 4.5E-36 309.8 18.0 268 927-1210 4-300 (337)
343 cd07852 STKc_MAPK15 Catalytic 100.0 5.8E-31 1.3E-35 306.2 21.8 274 926-1211 5-305 (337)
344 PHA03390 pk1 serine/threonine- 100.0 1.1E-30 2.3E-35 293.2 22.8 249 922-1203 8-262 (267)
345 cd08530 STKc_CNK2-like Catalyt 100.0 5.1E-31 1.1E-35 294.1 20.1 250 929-1203 1-253 (256)
346 cd05577 STKc_GRK Catalytic dom 100.0 6E-31 1.3E-35 297.3 20.9 245 936-1203 1-254 (277)
347 cd08215 STKc_Nek Catalytic dom 100.0 8.3E-31 1.8E-35 292.6 21.8 252 929-1203 1-255 (258)
348 cd07855 STKc_ERK5 Catalytic do 100.0 1.9E-31 4.1E-36 309.8 17.1 267 927-1204 4-295 (334)
349 KOG0604 MAP kinase-activated p 100.0 5.1E-32 1.1E-36 278.8 10.7 255 925-1204 58-323 (400)
350 cd07850 STKc_JNK Catalytic dom 100.0 4.9E-31 1.1E-35 308.8 20.7 259 926-1203 14-311 (353)
351 cd06618 PKc_MKK7 Catalytic dom 100.0 3.5E-31 7.5E-36 302.3 18.8 252 928-1203 15-273 (296)
352 cd05572 STKc_cGK_PKG Catalytic 100.0 6.4E-31 1.4E-35 294.5 20.3 242 936-1202 1-251 (262)
353 cd05118 STKc_CMGC Catalytic do 100.0 5.4E-31 1.2E-35 298.7 19.7 262 930-1203 1-280 (283)
354 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.5E-31 1.4E-35 303.9 20.7 284 924-1224 6-312 (328)
355 PLN00009 cyclin-dependent kina 100.0 4.2E-31 9.1E-36 301.4 18.0 265 928-1203 2-284 (294)
356 cd05579 STKc_MAST_like Catalyt 100.0 6.3E-31 1.4E-35 294.9 19.2 246 936-1205 1-256 (265)
357 cd06627 STKc_Cdc7_like Catalyt 100.0 2.3E-30 4.9E-35 288.4 23.4 248 929-1203 1-251 (254)
358 cd07857 STKc_MPK1 Catalytic do 100.0 1.3E-30 2.9E-35 302.5 22.2 294 929-1233 1-328 (332)
359 cd07840 STKc_CDK9_like Catalyt 100.0 7.8E-31 1.7E-35 298.0 19.9 263 930-1203 1-284 (287)
360 cd07834 STKc_MAPK Catalytic do 100.0 4.9E-31 1.1E-35 306.2 18.0 271 929-1210 1-298 (330)
361 cd07864 STKc_CDK12 Catalytic d 100.0 8.4E-31 1.8E-35 300.2 19.5 268 925-1203 4-299 (302)
362 cd08216 PK_STRAD Pseudokinase 100.0 2E-30 4.3E-35 298.9 22.2 257 934-1204 8-296 (314)
363 cd07830 STKc_MAK_like Catalyti 100.0 1.9E-30 4.1E-35 294.3 21.7 264 930-1203 1-280 (283)
364 cd06634 STKc_TAO2 Catalytic do 100.0 1.1E-30 2.4E-35 299.7 19.6 249 930-1208 17-272 (308)
365 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.9E-30 4.1E-35 291.0 21.1 251 928-1203 2-261 (264)
366 cd07879 STKc_p38delta_MAPK13 C 100.0 1.3E-30 2.8E-35 303.6 20.4 266 927-1210 14-306 (342)
367 KOG0696 Serine/threonine prote 100.0 1.7E-31 3.6E-36 284.6 11.6 200 928-1137 349-553 (683)
368 cd08226 PK_STRAD_beta Pseudoki 100.0 2.4E-30 5.3E-35 299.7 22.2 257 935-1203 5-308 (328)
369 cd05611 STKc_Rim15_like Cataly 100.0 1.4E-30 3.1E-35 291.3 19.3 242 934-1203 2-248 (260)
370 cd05613 STKc_MSK1_N N-terminal 100.0 3.3E-30 7.1E-35 293.4 22.5 252 929-1203 1-268 (290)
371 cd05581 STKc_PDK1 Catalytic do 100.0 1.7E-30 3.8E-35 294.0 20.1 250 928-1203 1-277 (280)
372 cd07838 STKc_CDK4_6_like Catal 100.0 4E-30 8.6E-35 292.3 22.9 262 930-1203 1-284 (287)
373 cd05606 STKc_beta_ARK Catalyti 100.0 3.2E-30 6.9E-35 291.4 21.3 242 935-1203 1-255 (278)
374 PTZ00024 cyclin-dependent prot 100.0 1.7E-30 3.7E-35 302.2 19.2 263 928-1203 8-313 (335)
375 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.6E-30 3.5E-35 302.8 19.1 265 927-1203 4-300 (342)
376 cd05583 STKc_MSK_N N-terminal 100.0 3.6E-30 7.8E-35 292.8 21.5 255 929-1206 1-266 (288)
377 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.2E-30 6.9E-35 300.3 21.0 266 926-1210 13-307 (343)
378 cd05610 STKc_MASTL Catalytic d 100.0 2.7E-30 5.9E-35 323.6 21.2 145 928-1080 4-152 (669)
379 cd06633 STKc_TAO3 Catalytic do 100.0 5.5E-30 1.2E-34 294.6 22.0 244 930-1203 23-273 (313)
380 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.8E-30 3.8E-35 302.8 17.7 269 919-1204 8-301 (345)
381 cd07866 STKc_BUR1 Catalytic do 100.0 3.8E-30 8.2E-35 296.2 20.2 267 927-1203 7-308 (311)
382 cd08222 STKc_Nek11 Catalytic d 100.0 4.8E-30 1E-34 287.1 19.8 251 929-1203 1-257 (260)
383 cd07829 STKc_CDK_like Catalyti 100.0 6.8E-30 1.5E-34 289.5 20.7 262 930-1203 1-279 (282)
384 cd07851 STKc_p38 Catalytic dom 100.0 4.1E-30 8.8E-35 299.6 19.2 261 926-1203 13-298 (343)
385 KOG0587 Traf2- and Nck-interac 100.0 3.1E-30 6.8E-35 301.0 17.7 255 925-1203 16-282 (953)
386 KOG0662 Cyclin-dependent kinas 100.0 2.5E-30 5.4E-35 246.6 13.4 263 929-1203 3-283 (292)
387 cd05123 STKc_AGC Catalytic dom 100.0 2.6E-29 5.7E-34 279.2 21.1 236 936-1199 1-240 (250)
388 KOG4236 Serine/threonine prote 100.0 9.2E-31 2E-35 286.4 9.1 245 933-1203 569-819 (888)
389 KOG1151 Tousled-like protein k 100.0 1.7E-30 3.7E-35 278.9 10.6 258 928-1203 463-741 (775)
390 KOG0669 Cyclin T-dependent kin 100.0 2E-31 4.4E-36 267.4 2.7 201 929-1137 18-232 (376)
391 KOG0603 Ribosomal protein S6 k 100.0 8E-30 1.7E-34 290.9 15.5 243 927-1206 321-566 (612)
392 KOG0671 LAMMER dual specificit 100.0 1.5E-30 3.3E-35 278.1 8.3 262 927-1203 88-406 (415)
393 KOG0984 Mitogen-activated prot 100.0 3.2E-30 7E-35 252.1 9.1 199 930-1135 48-253 (282)
394 KOG0695 Serine/threonine prote 100.0 8.7E-30 1.9E-34 264.6 12.5 200 927-1136 249-453 (593)
395 KOG0614 cGMP-dependent protein 100.0 2E-30 4.3E-35 283.6 7.5 249 929-1204 421-678 (732)
396 KOG1027 Serine/threonine prote 100.0 1.1E-29 2.4E-34 295.0 12.9 248 930-1203 511-767 (903)
397 cd05576 STKc_RPK118_like Catal 100.0 9.1E-29 2E-33 272.4 18.9 220 939-1198 4-224 (237)
398 KOG0608 Warts/lats-like serine 100.0 3.8E-29 8.1E-34 279.4 13.1 206 928-1141 629-878 (1034)
399 PLN03225 Serine/threonine-prot 100.0 1.4E-28 3.1E-33 300.0 18.7 263 926-1203 130-450 (566)
400 PLN03224 probable serine/threo 100.0 5.6E-28 1.2E-32 286.5 21.0 263 926-1203 143-500 (507)
401 smart00220 S_TKc Serine/Threon 100.0 9.8E-28 2.1E-32 264.8 20.4 238 940-1202 1-240 (244)
402 KOG0664 Nemo-like MAPK-related 99.9 1.6E-29 3.4E-34 256.2 1.2 262 932-1204 57-344 (449)
403 KOG1290 Serine/threonine prote 99.9 6.4E-27 1.4E-31 256.4 16.8 265 927-1203 77-550 (590)
404 KOG1345 Serine/threonine kinas 99.9 2.1E-27 4.5E-32 241.6 11.6 251 929-1204 25-288 (378)
405 KOG0668 Casein kinase II, alph 99.9 1.5E-27 3.2E-32 236.7 9.5 259 927-1203 37-322 (338)
406 KOG0576 Mitogen-activated prot 99.9 9.4E-28 2E-32 271.5 6.4 254 927-1203 14-271 (829)
407 KOG1152 Signal transduction se 99.9 4.7E-27 1E-31 261.5 11.0 197 927-1135 560-770 (772)
408 KOG0665 Jun-N-terminal kinase 99.9 1.4E-26 3.1E-31 242.0 11.1 286 929-1234 18-357 (369)
409 cd00180 PKc Catalytic domain o 99.9 3.9E-25 8.4E-30 238.1 21.2 211 936-1204 1-215 (215)
410 KOG0670 U4/U6-associated splic 99.9 1.9E-26 4.1E-31 253.3 8.4 273 918-1203 422-746 (752)
411 KOG4237 Extracellular matrix p 99.9 3.8E-27 8.2E-32 251.9 -1.9 405 350-793 68-498 (498)
412 smart00221 STYKc Protein kinas 99.9 2.4E-24 5.2E-29 234.9 19.7 199 930-1136 1-202 (225)
413 KOG1167 Serine/threonine prote 99.9 6.8E-25 1.5E-29 238.7 12.1 201 924-1137 32-281 (418)
414 PLN03210 Resistant to P. syrin 99.9 8.7E-23 1.9E-27 270.5 24.5 285 423-793 611-903 (1153)
415 KOG4237 Extracellular matrix p 99.9 3.4E-25 7.4E-30 237.0 0.2 272 180-460 49-359 (498)
416 KOG1165 Casein kinase (serine/ 99.9 1.6E-22 3.4E-27 212.0 18.1 274 929-1222 29-314 (449)
417 PLN03210 Resistant to P. syrin 99.9 2.1E-22 4.5E-27 266.9 23.9 346 390-822 550-909 (1153)
418 PRK15387 E3 ubiquitin-protein 99.9 9.6E-23 2.1E-27 249.4 15.4 241 448-801 223-463 (788)
419 PLN00181 protein SPA1-RELATED; 99.9 2.4E-23 5.3E-28 268.0 10.2 197 980-1203 28-265 (793)
420 PRK15387 E3 ubiquitin-protein 99.9 3E-22 6.4E-27 245.2 17.5 267 326-643 203-469 (788)
421 smart00750 KIND kinase non-cat 99.9 2.6E-22 5.5E-27 210.1 14.7 167 1009-1208 1-170 (176)
422 KOG1164 Casein kinase (serine/ 99.9 1.9E-21 4E-26 223.3 22.7 275 929-1223 19-313 (322)
423 KOG1163 Casein kinase (serine/ 99.9 1.2E-21 2.6E-26 196.6 15.7 280 926-1225 13-302 (341)
424 PRK09188 serine/threonine prot 99.9 7.1E-22 1.5E-26 224.8 14.6 175 926-1118 16-210 (365)
425 KOG0195 Integrin-linked kinase 99.9 7.1E-22 1.5E-26 200.8 7.6 247 932-1208 194-447 (448)
426 PRK15370 E3 ubiquitin-protein 99.8 4.4E-21 9.4E-26 237.0 12.3 79 549-637 306-384 (754)
427 KOG0590 Checkpoint kinase and 99.8 4.4E-21 9.5E-26 233.0 8.1 254 932-1203 322-585 (601)
428 PRK15370 E3 ubiquitin-protein 99.8 1.2E-20 2.6E-25 233.1 11.4 246 424-796 179-428 (754)
429 COG0515 SPS1 Serine/threonine 99.8 5E-19 1.1E-23 205.4 24.0 260 930-1203 2-275 (384)
430 PRK10359 lipopolysaccharide co 99.8 1.8E-19 3.9E-24 190.2 10.5 171 926-1128 29-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 6.9E-19 1.5E-23 184.7 12.9 140 933-1083 2-168 (190)
432 KOG0617 Ras suppressor protein 99.8 1.2E-20 2.7E-25 179.5 -4.8 166 545-806 31-196 (264)
433 PRK12274 serine/threonine prot 99.8 6.3E-18 1.4E-22 174.1 14.4 186 931-1136 5-209 (218)
434 cd05145 RIO1_like RIO kinase f 99.8 1.1E-17 2.3E-22 176.7 16.0 139 933-1083 2-168 (190)
435 PF14531 Kinase-like: Kinase-l 99.7 7.1E-18 1.5E-22 183.5 13.6 232 932-1194 16-288 (288)
436 KOG1023 Natriuretic peptide re 99.7 1.1E-17 2.3E-22 193.3 13.3 219 978-1211 1-228 (484)
437 KOG4158 BRPK/PTEN-induced prot 99.7 2.5E-17 5.4E-22 176.8 12.7 198 982-1205 274-512 (598)
438 KOG0617 Ras suppressor protein 99.7 1E-19 2.2E-24 173.4 -5.2 188 443-639 29-219 (264)
439 KOG1166 Mitotic checkpoint ser 99.7 4.3E-17 9.4E-22 200.7 15.5 197 925-1132 695-901 (974)
440 KOG0603 Ribosomal protein S6 k 99.7 8.7E-19 1.9E-23 201.0 0.3 186 935-1136 1-193 (612)
441 PRK10345 hypothetical protein; 99.7 7.2E-17 1.6E-21 170.6 14.7 136 931-1079 5-156 (210)
442 cd00116 LRR_RI Leucine-rich re 99.7 1E-18 2.2E-23 201.8 -0.2 208 403-632 3-234 (319)
443 KOG1240 Protein kinase contain 99.7 4.3E-18 9.3E-23 203.7 5.0 245 929-1203 24-291 (1431)
444 cd00116 LRR_RI Leucine-rich re 99.7 1.7E-17 3.8E-22 191.6 6.1 138 297-434 163-318 (319)
445 KOG0606 Microtubule-associated 99.7 3.4E-17 7.4E-22 196.4 5.3 215 928-1202 83-311 (1205)
446 smart00090 RIO RIO-like kinase 99.6 6.9E-16 1.5E-20 167.6 12.6 142 929-1083 29-199 (237)
447 PRK14879 serine/threonine prot 99.6 2.6E-15 5.7E-20 162.0 14.8 134 934-1081 2-143 (211)
448 TIGR03724 arch_bud32 Kae1-asso 99.6 2.2E-15 4.7E-20 161.0 13.2 131 935-1082 1-139 (199)
449 KOG1033 eIF-2alpha kinase PEK/ 99.6 1.1E-16 2.5E-21 180.3 3.2 124 998-1129 330-457 (516)
450 cd05144 RIO2_C RIO kinase fami 99.6 2.5E-15 5.3E-20 160.1 13.1 143 924-1084 11-177 (198)
451 PRK09605 bifunctional UGMP fam 99.6 3.3E-15 7.1E-20 183.5 14.1 137 928-1082 333-477 (535)
452 PLN03150 hypothetical protein; 99.6 3.1E-15 6.8E-20 185.3 10.9 117 712-828 419-538 (623)
453 KOG0532 Leucine-rich repeat (L 99.5 4.7E-16 1E-20 174.6 -5.1 177 547-800 75-251 (722)
454 cd05119 RIO RIO kinase family, 99.5 9.7E-14 2.1E-18 146.7 12.1 136 933-1083 2-165 (187)
455 cd05120 APH_ChoK_like Aminogly 99.5 1.5E-13 3.2E-18 139.6 12.3 135 932-1081 2-138 (155)
456 KOG0590 Checkpoint kinase and 99.5 5.3E-15 1.1E-19 180.2 -0.7 256 929-1203 21-286 (601)
457 KOG0532 Leucine-rich repeat (L 99.5 3.6E-15 7.9E-20 167.6 -2.0 189 502-769 79-270 (722)
458 PRK01723 3-deoxy-D-manno-octul 99.5 4.7E-13 1E-17 145.9 14.3 134 934-1081 37-191 (239)
459 KOG1909 Ran GTPase-activating 99.4 6.5E-14 1.4E-18 149.7 2.1 211 102-312 31-283 (382)
460 COG4886 Leucine-rich repeat (L 99.3 1E-12 2.2E-17 156.3 7.7 180 547-802 116-296 (394)
461 KOG1909 Ran GTPase-activating 99.3 1.3E-13 2.7E-18 147.6 -0.7 263 119-410 23-310 (382)
462 KOG3207 Beta-tubulin folding c 99.3 3.2E-13 7E-18 148.1 2.4 187 147-337 117-314 (505)
463 KOG3207 Beta-tubulin folding c 99.3 4.2E-13 9.1E-18 147.2 1.6 216 221-461 118-340 (505)
464 TIGR01982 UbiB 2-polyprenylphe 99.3 1.5E-11 3.4E-16 145.7 13.3 140 933-1083 122-308 (437)
465 KOG4341 F-box protein containi 99.3 1.7E-13 3.7E-18 149.4 -3.2 309 80-409 100-437 (483)
466 COG4886 Leucine-rich repeat (L 99.3 2.9E-12 6.3E-17 152.4 6.6 193 427-632 97-290 (394)
467 KOG1266 Protein kinase [Signal 99.3 7.6E-12 1.6E-16 132.3 7.7 214 974-1209 117-337 (458)
468 KOG0601 Cyclin-dependent kinas 99.2 6.8E-12 1.5E-16 145.3 7.0 249 929-1203 115-379 (524)
469 PLN03150 hypothetical protein; 99.2 2.4E-11 5.3E-16 150.8 11.9 79 54-139 368-455 (623)
470 KOG1243 Protein kinase [Genera 99.2 8E-10 1.7E-14 129.0 18.8 233 950-1211 35-267 (690)
471 PRK04750 ubiB putative ubiquin 99.2 5.2E-11 1.1E-15 142.3 8.7 147 927-1084 119-316 (537)
472 cd05151 ChoK Choline Kinase (C 99.1 2E-10 4.3E-15 119.2 10.0 129 934-1080 4-135 (170)
473 KOG1259 Nischarin, modulator o 99.1 3.9E-11 8.4E-16 125.0 1.5 65 733-800 350-416 (490)
474 KOG1259 Nischarin, modulator o 99.1 5.3E-11 1.2E-15 124.0 2.2 132 494-633 280-413 (490)
475 KOG4341 F-box protein containi 99.0 1.2E-11 2.6E-16 135.2 -3.0 276 88-386 97-384 (483)
476 PF14580 LRR_9: Leucine-rich r 99.0 2.7E-10 5.9E-15 115.8 6.6 110 296-412 16-127 (175)
477 cd05146 RIO3_euk RIO kinase fa 99.0 2.5E-09 5.5E-14 111.0 13.5 136 934-1083 3-175 (197)
478 COG3642 Mn2+-dependent serine/ 99.0 4E-09 8.6E-14 104.9 13.1 131 934-1081 2-140 (204)
479 PF14580 LRR_9: Leucine-rich r 99.0 4.2E-10 9E-15 114.5 5.6 125 199-356 20-147 (175)
480 KOG0601 Cyclin-dependent kinas 99.0 7.5E-10 1.6E-14 128.6 7.5 247 926-1206 263-517 (524)
481 KOG3087 Serine/threonine prote 99.0 1E-08 2.2E-13 101.0 13.6 143 932-1081 11-165 (229)
482 KOG0606 Microtubule-associated 98.9 3.2E-10 6.9E-15 137.5 2.0 249 927-1198 803-1084(1205)
483 KOG0531 Protein phosphatase 1, 98.9 2.2E-10 4.7E-15 136.4 0.3 267 325-637 50-323 (414)
484 cd05154 ACAD10_11_like Acyl-Co 98.9 7.9E-09 1.7E-13 112.4 11.9 141 934-1080 4-205 (223)
485 KOG0531 Protein phosphatase 1, 98.9 3.2E-10 7E-15 135.0 0.8 265 197-511 48-318 (414)
486 PF08263 LRRNT_2: Leucine rich 98.9 1.2E-09 2.6E-14 83.5 2.5 41 57-98 2-43 (43)
487 KOG2120 SCF ubiquitin ligase, 98.8 3.7E-10 8.1E-15 118.0 -1.2 181 200-384 187-373 (419)
488 KOG2120 SCF ubiquitin ligase, 98.8 2.9E-10 6.2E-15 118.9 -3.0 206 102-310 160-374 (419)
489 KOG2982 Uncharacterized conser 98.7 7.6E-09 1.7E-13 108.4 3.9 208 246-454 69-286 (418)
490 PF13855 LRR_8: Leucine rich r 98.7 1.5E-08 3.3E-13 84.7 4.1 60 712-771 2-61 (61)
491 PF13855 LRR_8: Leucine rich r 98.7 1.4E-08 3E-13 84.9 3.7 61 735-795 1-61 (61)
492 KOG3741 Poly(A) ribonuclease s 98.7 5.4E-07 1.2E-11 102.2 16.5 171 941-1133 289-475 (655)
493 PRK15123 lipopolysaccharide co 98.6 4.6E-07 1E-11 99.9 15.6 141 934-1081 28-194 (268)
494 KOG4658 Apoptotic ATPase [Sign 98.6 2.9E-08 6.3E-13 125.8 6.9 291 324-626 523-826 (889)
495 COG0478 RIO-like serine/threon 98.6 1.5E-07 3.2E-12 99.4 10.5 134 930-1080 93-250 (304)
496 COG4248 Uncharacterized protei 98.6 2E-06 4.3E-11 95.0 18.9 265 932-1209 15-302 (637)
497 PF01163 RIO1: RIO1 family; I 98.6 2E-07 4.3E-12 96.7 10.8 126 943-1083 1-157 (188)
498 KOG2982 Uncharacterized conser 98.6 3E-08 6.4E-13 104.1 3.1 244 88-357 34-287 (418)
499 KOG4658 Apoptotic ATPase [Sign 98.5 1E-07 2.2E-12 121.1 7.7 271 325-604 546-828 (889)
500 KOG1859 Leucine-rich repeat pr 98.5 2.9E-09 6.3E-14 123.5 -6.1 178 120-337 103-292 (1096)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.4e-109 Score=1094.80 Aligned_cols=921 Identities=32% Similarity=0.576 Sum_probs=636.4
Q ss_pred chhHHHHHHhhccccCCCCCCCcccccCCCCCCceeeeeecCCCCceeEEecCCCCCCCccccccccCCCCCCeEEccCC
Q 000889 57 NEELTILMAFKQSSIGSDPNGYLANWTADALTPCSWQGVSCSLNSHVTSLNLNNSGLSGSLNLTTLTALPYLEHLNLQGN 136 (1237)
Q Consensus 57 ~~~~~aLl~~k~~~~~~~~~~~l~sW~~~~~~~c~W~gv~c~~~~~v~~L~L~~~~l~~~~~~~~l~~l~~L~~L~Ls~n 136 (1237)
++|+.||++||+++ .||.+.+++|+. ..+||.|.||+|+..++|+.|+|++++++|.+. ..+..+++|+.|+|++|
T Consensus 28 ~~~~~~l~~~~~~~--~~~~~~~~~w~~-~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~-~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 28 AEELELLLSFKSSI--NDPLKYLSNWNS-SADVCLWQGITCNNSSRVVSIDLSGKNISGKIS-SAIFRLPYIQTINLSNN 103 (968)
T ss_pred HHHHHHHHHHHHhC--CCCcccCCCCCC-CCCCCcCcceecCCCCcEEEEEecCCCccccCC-hHHhCCCCCCEEECCCC
Confidence 57999999999985 578888999986 469999999999977899999999999998774 57888999999988888
Q ss_pred CCCcccchhhhhcCcccceecccCCcccCCcccccccccCCccceEEccCCccCCCccccCCcccEEEcCCCCCCCchhh
Q 000889 137 SFSAGDLSTSKTSSCSLVTMDLSSNNITGSLPGRSFLLSCDRLSYVNLSHNSISGGSLHIGPSLLQLDLSGNQISDSALL 216 (1237)
Q Consensus 137 ~l~~~~~~~~~~~~~~L~~L~Ls~n~l~g~~~~~~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~Ls~N~i~~~~~~ 216 (1237)
+++..-...+...+.+|++|+|++|.++|.+|.
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~----------------------------------------------- 136 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR----------------------------------------------- 136 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCc-----------------------------------------------
Confidence 875322222333455555555555555544331
Q ss_pred hccccCCCCCCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCccccccc
Q 000889 217 TYSLSNCQNLNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFG 296 (1237)
Q Consensus 217 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 296 (1237)
..+++|++|+|++|.+++..+..+..+++|++|+|++|.+.+.+|..+ ..+++|++|+|++|++++.
T Consensus 137 ----~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~------- 203 (968)
T PLN00113 137 ----GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL--TNLTSLEFLTLASNQLVGQ------- 203 (968)
T ss_pred ----cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh--hhCcCCCeeeccCCCCcCc-------
Confidence 223455555555555555555555555556666666555554444432 1223333444433333321
Q ss_pred CCCCCceeeccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCC
Q 000889 297 RCGNLSVITLSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTL 376 (1237)
Q Consensus 297 ~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L 376 (1237)
+|..+.++++|++|+|++|.+++.+|.. ++.+++|++|+|++|++++.+|..+.. +++|
T Consensus 204 -------------------~p~~l~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L 262 (968)
T PLN00113 204 -------------------IPRELGQMKSLKWIYLGYNNLSGEIPYE-IGGLTSLNHLDLVYNNLTGPIPSSLGN-LKNL 262 (968)
T ss_pred -------------------CChHHcCcCCccEEECcCCccCCcCChh-HhcCCCCCEEECcCceeccccChhHhC-CCCC
Confidence 3344444444444444444444444432 244444555555544444444444332 2445
Q ss_pred cEEEcccCcCCCCCCcCcccccccceeeccCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccC
Q 000889 377 RELDLSSNRLTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSS 456 (1237)
Q Consensus 377 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~ 456 (1237)
++|+|++|++.+..|..+.++++|+.|+|++|.+.+. .+..+..+++|++|++++|.+++..|..+..+++|+.|++++
T Consensus 263 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~ 341 (968)
T PLN00113 263 QYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGE-IPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341 (968)
T ss_pred CEEECcCCeeeccCchhHhhccCcCEEECcCCeeccC-CChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcC
Confidence 5555555555444444444444444444444444321 112222233333333333333334444455555555555555
Q ss_pred CcCcccCCCCCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCcCcceeecccccccC
Q 000889 457 NGFTGTIPSGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTG 536 (1237)
Q Consensus 457 N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 536 (1237)
|.++ +.+|..++.+++|+.|++++|++++.+|..+..+++|+.|++++|++.+
T Consensus 342 n~l~---------------------------~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~ 394 (968)
T PLN00113 342 NKFS---------------------------GEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG 394 (968)
T ss_pred CCCc---------------------------CcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecc
Confidence 5554 4445555666666777777777766667666667777777777777766
Q ss_pred cccccccccCCCccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCccccCCCCCCC
Q 000889 537 EIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLG 616 (1237)
Q Consensus 537 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~ 616 (1237)
.+|..+ ..+++|+.|+|++|++++.+|..|..+++|+.|+|++|++++.+|..+..+++|+.|+|++|++.+.+|..++
T Consensus 395 ~~p~~~-~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~ 473 (968)
T PLN00113 395 EIPKSL-GACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG 473 (968)
T ss_pred cCCHHH-hCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc
Confidence 666543 4567888888888888888898999999999999999999999999999999999999999999988888764
Q ss_pred CCCCCCEEECCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCc
Q 000889 617 KCRSLVWLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPST 696 (1237)
Q Consensus 617 ~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1237)
.++|+.|+|++|+++|.+|..+.++.
T Consensus 474 -~~~L~~L~ls~n~l~~~~~~~~~~l~----------------------------------------------------- 499 (968)
T PLN00113 474 -SKRLENLDLSRNQFSGAVPRKLGSLS----------------------------------------------------- 499 (968)
T ss_pred -cccceEEECcCCccCCccChhhhhhh-----------------------------------------------------
Confidence 58999999999999998887665432
Q ss_pred ceeccceeeeeccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCC
Q 000889 697 RIYTGMTMYTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIP 776 (1237)
Q Consensus 697 ~~~~~~~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p 776 (1237)
+|++|+|++|+++|.+|+.++++++|++|+|++|+++|.+|..|+++++|+.|||++|+++|.+|
T Consensus 500 ---------------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 564 (968)
T PLN00113 500 ---------------ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP 564 (968)
T ss_pred ---------------ccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCC
Confidence 68899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccccceecccccccccCCCCCCCCccCCCcccCCCCCCCCCC----CCCCCCCCCCccCCCCCccccccceehh
Q 000889 777 GSLGGLSFLSDLDVSNNNLSGIIPSGGQLTTFPASRYENNSGLCGLPL----LPCSSGNHAATVHPHENKQNVETGVVIG 852 (1237)
Q Consensus 777 ~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~~n~~~~~~p~----~~c~~~~~~~~~~~~~~~~~~~~~i~~~ 852 (1237)
..+..+++|+.|++++|+++|.+|+.+++.++.+..+.+|+++||.+. ++|... .......+.++++++
T Consensus 565 ~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~-------~~~~~~~~~~~~~~~ 637 (968)
T PLN00113 565 KNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-------RKTPSWWFYITCTLG 637 (968)
T ss_pred hhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc-------cccceeeeehhHHHH
Confidence 999999999999999999999999999999999999999999999753 345321 011111111111111
Q ss_pred hHHHHHHHHhhhhheehhccccchhhhhhhhhccCCCCCCCCCccCCCCCCCcccccccc-ccccccCHHHHHHHhCCCC
Q 000889 853 IAFFLLIILGLTLALYRVKKDQKKDEQREKYIESLPTSGSSSWKLSSVPEPLSINVATFE-KPLRKLTFAHLLEATNGFS 931 (1237)
Q Consensus 853 i~~~l~iil~l~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 931 (1237)
+ +++++++++++ ++++++++.+.+.. +. ..+ .+.. ..+. ...+.+++.++ ...|.
T Consensus 638 ~-~~~~~~~~~~~-~~~~~~~~~~~~~~----~~--~~~--~~~~-----------~~~~~~~~~~~~~~~~---~~~~~ 693 (968)
T PLN00113 638 A-FLVLALVAFGF-VFIRGRNNLELKRV----EN--EDG--TWEL-----------QFFDSKVSKSITINDI---LSSLK 693 (968)
T ss_pred H-HHHHHHHHHHH-HHHHhhhccccccc----cc--ccc--cccc-----------cccccccchhhhHHHH---HhhCC
Confidence 1 11112222222 22222211111000 00 000 0100 0000 11122333333 34577
Q ss_pred CCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCC
Q 000889 932 ADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGS 1010 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 1010 (1237)
..++||+|+||.||+|++. ++..||||++...... ..+|++++++++|||||+++++|.+.+..++||||+++|+
T Consensus 694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~ 769 (968)
T PLN00113 694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN 769 (968)
T ss_pred cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence 8889999999999999984 6889999988643221 2356889999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCccee
Q 000889 1011 LESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLS 1090 (1237)
Q Consensus 1011 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~ 1090 (1237)
|.++++ .++|..+.+++.|+|+|++|||..+.++|+||||||+||+++.++.+++. ||.+......
T Consensus 770 L~~~l~--------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----- 835 (968)
T PLN00113 770 LSEVLR--------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----- 835 (968)
T ss_pred HHHHHh--------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-----
Confidence 999985 37899999999999999999996656699999999999999999888875 6665433211
Q ss_pred eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCC
Q 000889 1091 VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQT 1170 (1237)
Q Consensus 1091 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1170 (1237)
....+++.|||||++.+..++.++|||||||++|||++|+.||+... ........|.+..........++|+......
T Consensus 836 -~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (968)
T PLN00113 836 -TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF-GVHGSIVEWARYCYSDCHLDMWIDPSIRGDV 913 (968)
T ss_pred -CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc-CCCCcHHHHHHHhcCccchhheeCccccCCC
Confidence 22367899999999999999999999999999999999999996533 3344566666655544445555665553322
Q ss_pred -CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccccc
Q 000889 1171 -SDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDT 1211 (1237)
Q Consensus 1171 -~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~ 1211 (1237)
....+..++.+++.+||+.+|++||||.++++.|+++....
T Consensus 914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 23456678889999999999999999999999999886543
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.4e-57 Score=594.87 Aligned_cols=518 Identities=38% Similarity=0.609 Sum_probs=411.7
Q ss_pred CCCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCCCcee
Q 000889 225 NLNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVI 304 (1237)
Q Consensus 225 ~L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 304 (1237)
.++.|+|++|.+++..+..+..+++|+.|+|++|.+.+.+|.... ..+.+|++|+|++|++++.++. +.+++|++|
T Consensus 70 ~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~-~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L 145 (968)
T PLN00113 70 RVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIF-TTSSSLRYLNLSNNNFTGSIPR---GSIPNLETL 145 (968)
T ss_pred cEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHh-ccCCCCCEEECcCCccccccCc---cccCCCCEE
Confidence 344444444444444444455555555555555555544444321 1344555555555555543332 345566666
Q ss_pred eccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEEEcccC
Q 000889 305 TLSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLRELDLSSN 384 (1237)
Q Consensus 305 ~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N 384 (1237)
+|++|.+++ .+|..+.++++|++|+|++|.+.+.+|.. ++.+++|++|+|++|++++.+|..+.. +++|++|+|++|
T Consensus 146 ~Ls~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~~n 222 (968)
T PLN00113 146 DLSNNMLSG-EIPNDIGSFSSLKVLDLGGNVLVGKIPNS-LTNLTSLEFLTLASNQLVGQIPRELGQ-MKSLKWIYLGYN 222 (968)
T ss_pred ECcCCcccc-cCChHHhcCCCCCEEECccCcccccCChh-hhhCcCCCeeeccCCCCcCcCChHHcC-cCCccEEECcCC
Confidence 666666654 24666677777777777777776666654 456777777777777777666666554 367777777777
Q ss_pred cCCCCCCcCcccccccceeeccCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCC
Q 000889 385 RLTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIP 464 (1237)
Q Consensus 385 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 464 (1237)
++++.+|..|+++++|++|++++|.+++. .+..+..+++|++|++++|.+++..|..+.++++|++|+|++|.+.+.+|
T Consensus 223 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p 301 (968)
T PLN00113 223 NLSGEIPYEIGGLTSLNHLDLVYNNLTGP-IPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP 301 (968)
T ss_pred ccCCcCChhHhcCCCCCEEECcCceeccc-cChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCC
Confidence 77777777777777777777777777643 34456677777777777777777888888888999999999999988888
Q ss_pred CCCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCcCcceeecccccccCcccccccc
Q 000889 465 SGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICV 544 (1237)
Q Consensus 465 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~ 544 (1237)
..+ ..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++.+|..++.+++|+.|++++|++++.+|..++
T Consensus 302 ~~~---~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~- 377 (968)
T PLN00113 302 ELV---IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC- 377 (968)
T ss_pred hhH---cCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh-
Confidence 776 4678889999999999888999999999999999999999999999999999999999999999998988764
Q ss_pred cCCCccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEE
Q 000889 545 NGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWL 624 (1237)
Q Consensus 545 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 624 (1237)
.+++|+.|++++|++.+.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 457 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQML 457 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCcceecccee
Q 000889 625 DLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGMTM 704 (1237)
Q Consensus 625 ~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (1237)
+|++|++.|.+|..++
T Consensus 458 ~L~~n~~~~~~p~~~~---------------------------------------------------------------- 473 (968)
T PLN00113 458 SLARNKFFGGLPDSFG---------------------------------------------------------------- 473 (968)
T ss_pred ECcCceeeeecCcccc----------------------------------------------------------------
Confidence 9999999987775321
Q ss_pred eeeccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCCCcccCccc
Q 000889 705 YTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIPGSLGGLSF 784 (1237)
Q Consensus 705 ~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~ 784 (1237)
..+|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|+.|+++++|++|+|++|+++|.+|..+..+++
T Consensus 474 -----~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 548 (968)
T PLN00113 474 -----SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPV 548 (968)
T ss_pred -----cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCccc
Confidence 126899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceecccccccccCCCC-CCCCccCCCcccCCCCCCCCC
Q 000889 785 LSDLDVSNNNLSGIIPSG-GQLTTFPASRYENNSGLCGLP 823 (1237)
Q Consensus 785 L~~l~l~~N~l~g~~p~~-~~~~~~~~~~~~~n~~~~~~p 823 (1237)
|+.|||++|+++|.+|.. ..++.+....+.+|.-.+..|
T Consensus 549 L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 549 LSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 999999999999999963 456667777777887665555
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-48 Score=444.26 Aligned_cols=292 Identities=50% Similarity=0.847 Sum_probs=257.4
Q ss_pred cccccCHHHHHHHhCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceE
Q 000889 914 PLRKLTFAHLLEATNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYC 993 (1237)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 993 (1237)
+.+.|++.++..||++|....+||+|+||.||+|...++..||||++........++|.+|+.++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 57889999999999999999999999999999999999999999988654432156799999999999999999999999
Q ss_pred EeCC-eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceE
Q 000889 994 KIGE-ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEAR 1072 (1237)
Q Consensus 994 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vk 1072 (1237)
.+.+ +.++|||||++|+|+++++..... +++|..|.+||.++|+||+|||+.+.++||||||||+|||+|+++++|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9988 599999999999999999875321 889999999999999999999999888999999999999999999999
Q ss_pred EeecccceeeccCCcceeeecc-ccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHH
Q 000889 1073 VSDFGMARLVNALDTHLSVSTL-AGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQ 1151 (1237)
Q Consensus 1073 l~DfGla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1151 (1237)
|+|||+|+........ .... .||.+|+|||+...+..+.|+|||||||++.|+++|+.|.+.........+..|...
T Consensus 218 lsDFGLa~~~~~~~~~--~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTS--VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred ccCccCcccCCccccc--eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 9999999655431211 1222 899999999999999999999999999999999999999987665556668999988
Q ss_pred HhhhcccccccCccccCCCCC-HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccc
Q 000889 1152 LHREKRINEILDPELTMQTSD-ETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVD 1210 (1237)
Q Consensus 1152 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~ 1210 (1237)
......+.+++|+.+...... ..++.++..++.+|++.+|.+||+|.+|+++|+.+...
T Consensus 296 ~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 888889999999998743333 36888899999999999999999999999999776654
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-44 Score=383.50 Aligned_cols=253 Identities=27% Similarity=0.431 Sum_probs=205.9
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEecc-ccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCC-eEEEEEEec
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIH-VTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE-ERLLVYEYM 1006 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~ 1006 (1237)
.+..+.||+|+.|+||+++++ +++.+|+|++.. ......+++.+|++++++++||+||++||.|.... +..++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 344578999999999999998 577899998843 23334568999999999999999999999999888 599999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++|+|++++... +.+++....+|+.+|++||.|||+.+ +||||||||+|||+...|+|||||||.++.+...
T Consensus 161 DgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 161 DGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred CCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 999999999764 46899999999999999999999732 9999999999999999999999999999876543
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
...+++||..|||||.+.+..|+.++||||||++++|+.+|+.||.+.... ..+..........+. .|.+
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-~~~~~~Ll~~Iv~~p------pP~l 302 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-YLDIFELLCAIVDEP------PPRL 302 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-CCCHHHHHHHHhcCC------CCCC
Confidence 346789999999999999999999999999999999999999999865211 112222222111111 1222
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
+.. ....+|..++..|+++||.+|||+.++++|=
T Consensus 303 P~~----~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 303 PEG----EFSPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred Ccc----cCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 221 1234566777799999999999999999883
No 5
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-43 Score=376.70 Aligned_cols=200 Identities=34% Similarity=0.534 Sum_probs=180.1
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc--cCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV--TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.++|.+.+.||+|+||+||+|+++ ++.+||||++... .....+.+..|+++++.++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 457888888999999999999987 5789999999765 3333455788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC------CceEEeecc
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN------FEARVSDFG 1077 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~------~~vkl~DfG 1077 (1237)
|||.||+|.+|++.+ +.+++..++.++.|+|.|+++||++ +||||||||+|||++.. -.+||+|||
T Consensus 89 EyC~gGDLs~yi~~~-----~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR-----GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred EeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 999999999999875 4789999999999999999999999 99999999999999864 568999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCC
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
+|+.+.... ...+.||++-|||||++..++|+.|+|+||+|+++|+|++|+.||+..
T Consensus 161 fAR~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 161 FARFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hhhhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 999887433 236789999999999999999999999999999999999999999854
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-42 Score=392.80 Aligned_cols=248 Identities=27% Similarity=0.456 Sum_probs=209.7
Q ss_pred CCCCCCceecccCCeEEEEEEE-CCCCEEEEEEeccc---cCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQL-RDGSVVAIKKLIHV---TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.+|...+.||+|+|+.||.+++ ..|+.||+|++.+. .....+.+.+|+++.++++|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 3588899999999999999998 78999999998652 3344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
|+|+.++|..+++.+ +++++.+++.++.||+.|+.|||+. +|+|||||..|++++++.+|||+|||+|..+.
T Consensus 98 ELC~~~sL~el~Krr-----k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR-----KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred EecCCccHHHHHHhc-----CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeec
Confidence 999999999999843 5899999999999999999999999 99999999999999999999999999999887
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
..++. ..+.||||.|.|||++....++..+||||+||+||-|+.|++||+.....+ ....+..
T Consensus 170 ~~~Er--k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke---------------ty~~Ik~ 232 (592)
T KOG0575|consen 170 YDGER--KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE---------------TYNKIKL 232 (592)
T ss_pred Ccccc--cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH---------------HHHHHHh
Confidence 54333 467899999999999999999999999999999999999999997543211 1111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+...+..-. .+..++|.++++.+|.+|||+++|+.+
T Consensus 233 ~~Y~~P~~ls---~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 233 NEYSMPSHLS---AEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cCcccccccC---HHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1222222222 234577789999999999999999987
No 7
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=391.39 Aligned_cols=257 Identities=31% Similarity=0.520 Sum_probs=208.2
Q ss_pred CCceecccCCeEEEEEEECCCCEEEEEEeccccCcC--HHHHHHHHHHHHhcCCCCcccccceEEeCC-eEEEEEEeccC
Q 000889 932 ADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQG--DREFMAEMETIGKIKHRNLVPLLGYCKIGE-ERLLVYEYMKW 1008 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~ 1008 (1237)
..+.||+|+||+||+|.++....||||++....... .++|.+|+.+|.+++|||||+++|+|.+.. ..++||||+++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 344599999999999999855559999987533222 458999999999999999999999998877 79999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC-eeecCCCCCCeeeCCCC-ceEEeecccceeeccCC
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPH-IIHRDMKSSNVLLDENF-EARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivHrDikp~NIll~~~~-~vkl~DfGla~~~~~~~ 1086 (1237)
|+|.++++.. ....+++..+.+|+.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 125 GSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999875 136899999999999999999999999 7 99999999999999997 99999999998765322
Q ss_pred cceeeeccccCCCcCCccccC--ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQ--SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... ...+....... ..+
T Consensus 199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~~~~~~v~~~~-----~Rp 265 (362)
T KOG0192|consen 199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------VQVASAVVVGG-----LRP 265 (362)
T ss_pred --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcC-----CCC
Confidence 2334478999999999999 56899999999999999999999999975432 11111111111 111
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccC
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTE 1212 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~ 1212 (1237)
.+ +.. ....+..++.+||+.||+.||++.+++..|+.+.....
T Consensus 266 ~~--p~~---~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 266 PI--PKE---CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CC--Ccc---CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 11 111 33456678889999999999999999999998866443
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-43 Score=376.59 Aligned_cols=253 Identities=27% Similarity=0.384 Sum_probs=203.4
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc-------CHHHHHHHHHHHHhcCCCCcccccceEEeCC
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ-------GDREFMAEMETIGKIKHRNLVPLLGYCKIGE 997 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 997 (1237)
..+.|.+.+.||+|+||.|-+|..+ +|+.||||.+.+.... ......+|+++|++++|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3456888999999999999999865 6999999988643221 1234579999999999999999999999999
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC---CceEEe
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN---FEARVS 1074 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~---~~vkl~ 1074 (1237)
..||||||++||+|.+++-.. +.+.+...+.+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n-----k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN-----KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc-----cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEec
Confidence 999999999999999998764 4677888899999999999999999 99999999999999765 789999
Q ss_pred ecccceeeccCCcceeeeccccCCCcCCccccCcccc---CcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHH
Q 000889 1075 DFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRC---TTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQ 1151 (1237)
Q Consensus 1075 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1151 (1237)
|||+|+..+. ...+.+.||||.|.|||++.+..+ ..++|+||+||++|-+++|.+||..+.... .+ .++
T Consensus 322 DFGlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl---~eQ 393 (475)
T KOG0615|consen 322 DFGLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SL---KEQ 393 (475)
T ss_pred ccchhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cH---HHH
Confidence 9999997753 234578999999999999986543 347899999999999999999998654221 11 111
Q ss_pred HhhhcccccccCccccCC-CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1152 LHREKRINEILDPELTMQ-TSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1152 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. ...++... .....-..+.+++|.+|+..||++|||++|++++
T Consensus 394 I---------~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 394 I---------LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred H---------hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 1 11111111 1223334566788889999999999999999987
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=386.92 Aligned_cols=256 Identities=30% Similarity=0.466 Sum_probs=212.9
Q ss_pred CCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 932 ADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
..+.||+|.||+||.|.++....||+|.++.. ....++|.+|+++|++++|++||+++++|..++..+||||||+.|+|
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 34679999999999999998879999998754 45567899999999999999999999999998899999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceee
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSV 1091 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~ 1091 (1237)
.+|++.. .+..+...+...++.|||+|++||+++ ++|||||.++||||+++..+||+|||+|+.... +.+...
T Consensus 289 l~yLr~~---~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d-~~Y~~~ 361 (468)
T KOG0197|consen 289 LDYLRTR---EGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGD-DEYTAS 361 (468)
T ss_pred HHHhhhc---CCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCC-Cceeec
Confidence 9999873 246788999999999999999999999 999999999999999999999999999994433 333233
Q ss_pred eccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCC
Q 000889 1092 STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQT 1170 (1237)
Q Consensus 1092 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1170 (1237)
....-+..|.|||++....++.|||||||||+||||+| |+.||.... .........+.. +++.+.
T Consensus 362 ~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms------n~ev~~~le~Gy--------Rlp~P~ 427 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS------NEEVLELLERGY--------RLPRPE 427 (468)
T ss_pred CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC------HHHHHHHHhccC--------cCCCCC
Confidence 34445778999999999999999999999999999999 888876432 222333333333 333344
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccC
Q 000889 1171 SDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTE 1212 (1237)
Q Consensus 1171 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~ 1212 (1237)
.+++++ .+++..||+.+|++|||+..+...++++....+
T Consensus 428 ~CP~~v---Y~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~~ 466 (468)
T KOG0197|consen 428 GCPDEV---YELMKSCWHEDPEDRPTFETLREVLEDFFTSTE 466 (468)
T ss_pred CCCHHH---HHHHHHHhhCCcccCCCHHHHHHHHHHhhhccc
Confidence 455554 457779999999999999999999998876554
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-43 Score=358.09 Aligned_cols=257 Identities=26% Similarity=0.411 Sum_probs=206.1
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccc-eEEeCCe-EEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLG-YCKIGEE-RLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lv~ 1003 (1237)
+|++.++||+|+||+||+++.. +|..+|.|++.... ....++...|+.++++++|||||++++ .+.+..+ .++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 4677789999999999999865 79999999987322 223456889999999999999999999 5555555 89999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIP-HIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||.+|+|...++...+ .++.+++..+++++.|++.||+.+|+.... .|+||||||.||+++.+|.||++|||+++.+
T Consensus 100 E~c~~GDLsqmIk~~K~-qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKK-QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HhhcccCHHHHHHHHHh-ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999999987654 357899999999999999999999994321 3999999999999999999999999999988
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
....+. ..+.+|||.||+||.+.+..|+.+|||||+||++|||+.-++||.+. ++.......... ..
T Consensus 179 ~s~~tf--A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI~qg-d~---- 245 (375)
T KOG0591|consen 179 SSKTTF--AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKIEQG-DY---- 245 (375)
T ss_pred cchhHH--HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHHHcC-CC----
Confidence 754332 34688999999999999999999999999999999999999999754 333333322222 11
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
+++ ...-...++..+|..|+.+||+.||+...+++.+
T Consensus 246 -~~~----p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 246 -PPL----PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred -CCC----cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 111 1233556788889999999999999865444443
No 11
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-42 Score=405.13 Aligned_cols=269 Identities=28% Similarity=0.492 Sum_probs=221.4
Q ss_pred hCCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 999 (1237)
..+.+..+.||+|+||+||+|+.. +...||||.++..... ..++|.+|++.+..++|||||+++|+|.+++..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 344566778999999999999864 3457999999876665 567899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhcCC-----CC----ccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGG-----GT----KLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFE 1070 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~-----~~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~ 1070 (1237)
+||+|||..|||.+||+.+.... +. +++..+.+.||.|||.||+||-++ .+|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence 99999999999999998754321 22 388999999999999999999999 9999999999999999999
Q ss_pred eEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHH
Q 000889 1071 ARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWA 1149 (1237)
Q Consensus 1071 vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 1149 (1237)
|||+|||+++..-..+.+.......-+.+|||||.+..++|+++||||||||++||+++ |+.||.+..-+ .....
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~---EVIe~- 717 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ---EVIEC- 717 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH---HHHHH-
Confidence 99999999998877676655445666889999999999999999999999999999998 99998754321 11111
Q ss_pred HHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCCC
Q 000889 1150 KQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGDS 1215 (1237)
Q Consensus 1150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~~ 1215 (1237)
.+.+++ +..+..++. ++..++..||+..|.+||+++|+-..|+....+.+...
T Consensus 718 ---i~~g~l-------L~~Pe~CP~---~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~~ 770 (774)
T KOG1026|consen 718 ---IRAGQL-------LSCPENCPT---EVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKYS 770 (774)
T ss_pred ---HHcCCc-------ccCCCCCCH---HHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcccc
Confidence 111211 223333444 55677779999999999999999999999877665543
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-41 Score=359.47 Aligned_cols=250 Identities=25% Similarity=0.352 Sum_probs=203.2
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
.++|++.++||+|+||.||.++.+ +++.+|.|++.+..- .+.+...+|..++.+++||+||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 346899999999999999999876 478899998875332 3356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
+||+.||.|..++++. ..+++..++.++.+|+.||.|||+. +|||||+||+|||+|.+|+++|+|||+++..
T Consensus 104 ld~~~GGeLf~hL~~e-----g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE-----GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EeccCCccHHHHHHhc-----CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 9999999999999864 5789999999999999999999999 9999999999999999999999999999854
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
...+. ...+.+||+.|||||++.+..|+.++|+||+|+++|||++|.+||.... ...+.+.....+.
T Consensus 176 ~~~~~--~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~------~~~~~~~I~~~k~----- 242 (357)
T KOG0598|consen 176 LKDGD--ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED------VKKMYDKILKGKL----- 242 (357)
T ss_pred ccCCC--ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc------HHHHHHHHhcCcC-----
Confidence 43222 2356899999999999999999999999999999999999999997532 2233333332220
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCC----CHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRP----TMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP----t~~ell~~ 1203 (1237)
...+..... +..+++.+.+..+|++|. ++.++.++
T Consensus 243 ---~~~p~~ls~---~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 243 ---PLPPGYLSE---EARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred ---CCCCccCCH---HHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 111111122 344666789999999995 45554443
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.8e-41 Score=343.96 Aligned_cols=264 Identities=24% Similarity=0.337 Sum_probs=203.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
+.|+...++|+|+||+||+++++ +|+.||||++...... -.+-.++|++++++++|||+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35777889999999999999988 4899999999753321 12446899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
||+..-|.+ ++... ..++...+.++++|+++|+.|+|++ ++|||||||+|||++.+|.+|+||||+|+....
T Consensus 82 ~~dhTvL~e-Le~~p----~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 82 YCDHTVLHE-LERYP----NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred ecchHHHHH-HHhcc----CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 998544443 44432 4578889999999999999999999 999999999999999999999999999998874
Q ss_pred CCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHH-----------
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQL----------- 1152 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~----------- 1152 (1237)
... .++..+.|..|+|||.+.+ .+|+.++||||+||++.||++|.+-|.+.+. .+.+.......
T Consensus 154 pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD--iDQLy~I~ktLG~L~prhq~iF 229 (396)
T KOG0593|consen 154 PGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD--IDQLYLIRKTLGNLIPRHQSIF 229 (396)
T ss_pred Ccc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch--HHHHHHHHHHHcccCHHHHHHh
Confidence 332 2356778999999999987 7899999999999999999999999987542 22222211111
Q ss_pred hhhcccccccCccccCCCC----CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1153 HREKRINEILDPELTMQTS----DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1153 ~~~~~~~~~~~~~l~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.....+..+.-|....... .+....-+++++..|++.||++|++.++++.+
T Consensus 230 ~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 230 SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 1111111111111111110 11122356789999999999999999999875
No 14
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.7e-39 Score=329.75 Aligned_cols=264 Identities=26% Similarity=0.352 Sum_probs=206.5
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
.+|...+++|+|.||.||+|++. +|+.||||+++..... -.....+|++.++.++||||+.++++|.+.+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 35777889999999999999876 6899999999743222 23467899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
||+ .+|+.++++.. ..+.....+.++.++++|++|||++ .|+||||||.|+|++.+|.+||+|||+|+.+..
T Consensus 82 fm~-tdLe~vIkd~~----i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKN----IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred ecc-ccHHHHhcccc----cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 998 79999998764 4789999999999999999999999 999999999999999999999999999998876
Q ss_pred CCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--cccccc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--KRINEI 1161 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 1161 (1237)
.+.... ..+-|..|+|||.+.|. .|+..+||||.|||+.||+-|.+-|.+.. +.+.+....+.+... +...++
T Consensus 154 p~~~~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s--DidQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 154 PNRIQT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS--DIDQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred CCcccc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc--hHHHHHHHHHHcCCCCcccCccc
Confidence 554432 33678899999998875 69999999999999999999988776542 112222222211111 000000
Q ss_pred ---c-------CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 ---L-------DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 ---~-------~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
- -|......-.+.+..+.++++.+|+..+|.+|+|++|++++
T Consensus 230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0 01111111122334556889999999999999999999987
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=363.66 Aligned_cols=250 Identities=26% Similarity=0.384 Sum_probs=209.1
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
..|+...+||+|+.|.||.|+.. .++.||||++........+-+.+|+.+|+..+|+|||.+++.|..+++.|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 45777789999999999999765 68899999998766666667899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
+||+|.+++... .+++.+...|+.++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+....
T Consensus 353 ~ggsLTDvVt~~------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 353 EGGSLTDVVTKT------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred CCCchhhhhhcc------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 999999998763 589999999999999999999999 99999999999999999999999999998776543
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. +..+.+|||.|||||++....|+.++||||||++++||+.|.+||-... .+... ..+...-.+.+
T Consensus 424 ~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~-----PlrAl-------yLIa~ng~P~l 489 (550)
T KOG0578|consen 424 S--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN-----PLRAL-------YLIATNGTPKL 489 (550)
T ss_pred C--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC-----hHHHH-------HHHhhcCCCCc
Confidence 3 3467889999999999999999999999999999999999999986421 11111 11111122333
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
........ .|.+++.+|+..||++||++.|++++
T Consensus 490 k~~~klS~---~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 490 KNPEKLSP---ELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CCccccCH---HHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 33322333 45566669999999999999999987
No 16
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-40 Score=378.71 Aligned_cols=282 Identities=26% Similarity=0.449 Sum_probs=221.6
Q ss_pred ccccccccccccccCHHHHHHHhCCCCCCceecccCCeEEEEEEECC----CCEEEEEEeccc-cCcCHHHHHHHHHHHH
Q 000889 905 SINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGEVYKAQLRD----GSVVAIKKLIHV-TGQGDREFMAEMETIG 979 (1237)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~ 979 (1237)
.+++.++|+|.+-...-.-+.......+.++||.|.||+||+|+++. ...||||.++.- .....++|..|+.||.
T Consensus 606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMG 685 (996)
T KOG0196|consen 606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMG 685 (996)
T ss_pred ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcc
Confidence 35556666664322111111112345678899999999999999872 457999999743 3445678999999999
Q ss_pred hcCCCCcccccceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 000889 980 KIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMK 1059 (1237)
Q Consensus 980 ~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDik 1059 (1237)
+++||||+++-|+.......+||.|||++|+|+.||+.+. .++.+.+..-++++||.|+.||.+. ++|||||.
T Consensus 686 QFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D----GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLA 758 (996)
T KOG0196|consen 686 QFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND----GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLA 758 (996)
T ss_pred cCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC----CceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhh
Confidence 9999999999999999999999999999999999998763 5699999999999999999999999 99999999
Q ss_pred CCCeeeCCCCceEEeecccceeeccCCcceeeecccc--CCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCC
Q 000889 1060 SSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAG--TPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDP 1136 (1237)
Q Consensus 1060 p~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~ 1136 (1237)
++|||++.+..+|++|||+++..+... ....++..| +.+|.|||.+..++++.+|||||||++|||.++ |.+||-.
T Consensus 759 ARNILVNsnLvCKVsDFGLSRvledd~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd 837 (996)
T KOG0196|consen 759 ARNILVNSNLVCKVSDFGLSRVLEDDP-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 837 (996)
T ss_pred hhheeeccceEEEeccccceeecccCC-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc
Confidence 999999999999999999999876533 222233333 568999999999999999999999999999887 9999754
Q ss_pred CCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccccc
Q 000889 1137 SEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDT 1211 (1237)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~ 1211 (1237)
... ++. +..... +.+++.+.+++ ..+-++++.||++|-.+||++.+++.+|.++..++
T Consensus 838 mSN---QdV---IkaIe~--------gyRLPpPmDCP---~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 838 MSN---QDV---IKAIEQ--------GYRLPPPMDCP---AALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred cch---HHH---HHHHHh--------ccCCCCCCCCc---HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 321 111 111111 23344333444 45668888999999999999999999999886654
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=359.64 Aligned_cols=254 Identities=25% Similarity=0.363 Sum_probs=208.4
Q ss_pred HHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc---cCcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeE
Q 000889 925 EATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV---TGQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 925 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 999 (1237)
+..++|...+.||+|+|++||+|+.+ .++.+|||++.+. .....+-+..|-.+|.+| .||.|++++..|++....
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 34567889999999999999999876 5889999988532 222334567899999999 899999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
|+|+||+++|+|.+++++. +.+++.-++.++.+|+.|++|||++ |||||||||+|||+|+|+++||+|||.|
T Consensus 150 YFvLe~A~nGdll~~i~K~-----Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY-----GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred EEEEEecCCCcHHHHHHHh-----CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeecccc
Confidence 9999999999999999886 5789999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc-----------eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHH
Q 000889 1080 RLVNALDTH-----------LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGW 1148 (1237)
Q Consensus 1080 ~~~~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~ 1148 (1237)
+.+...... .....++||..|.+||++.....+..+|+|+|||++|+|+.|.+||.+.. .+..+
T Consensus 222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-----eyliF 296 (604)
T KOG0592|consen 222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-----EYLIF 296 (604)
T ss_pred ccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-----HHHHH
Confidence 987543221 11245899999999999999999999999999999999999999997532 12222
Q ss_pred HHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1149 AKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1149 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.+ |++-.+..+...++ ...+++.+.+..||.+|+|..++.+|-
T Consensus 297 qk----------I~~l~y~fp~~fp~---~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 297 QK----------IQALDYEFPEGFPE---DARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred HH----------HHHhcccCCCCCCH---HHHHHHHHHHccCccccccHHHHhhCc
Confidence 22 22222222222333 345677799999999999999998874
No 18
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-39 Score=332.78 Aligned_cols=236 Identities=28% Similarity=0.372 Sum_probs=197.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|+..+.||.|+||+|.+++.+ +|..+|.|.+.+.. ..+.++..+|.++++.+.||+++++++.+.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 35788899999999999999987 58889999886432 233456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||++||.|.+++++. +++++..++.+|.+|+.|++|||+. +|++||+||+|||+|++|++||+|||+|+++.
T Consensus 124 eyv~GGElFS~Lrk~-----~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~ 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS-----GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVS 195 (355)
T ss_pred eccCCccHHHHHHhc-----CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEec
Confidence 999999999999875 5789999999999999999999999 99999999999999999999999999999875
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.. ..+.||||.|+|||++....|..++|.|||||++|||+.|.+||..... +..+ .+|+.
T Consensus 196 ~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~~iY----------~KI~~ 255 (355)
T KOG0616|consen 196 GR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----IQIY----------EKILE 255 (355)
T ss_pred Cc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----HHHH----------HHHHh
Confidence 32 3578999999999999999999999999999999999999999975432 2222 22333
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCC
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKR 1194 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~R 1194 (1237)
..+..+.....+ +.+++...+++|-.+|
T Consensus 256 ~~v~fP~~fs~~---~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 256 GKVKFPSYFSSD---AKDLLKKLLQVDLTKR 283 (355)
T ss_pred CcccCCcccCHH---HHHHHHHHHhhhhHhh
Confidence 333333333333 3456668888888888
No 19
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=353.90 Aligned_cols=260 Identities=27% Similarity=0.437 Sum_probs=202.5
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCC--eEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE--ERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 1004 (1237)
.+|...+.||+|+||+||++...+ |...|||.+........+.+.+|++++++++|||||+++|...... .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 346677899999999999999875 8899999886543333566889999999999999999999855544 6899999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC-CCceEEeecccceeec
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE-NFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~-~~~vkl~DfGla~~~~ 1083 (1237)
|+++|+|.+++.... + .+++..+++++.||++||+|||++ +||||||||+|||++. ++.+||+|||+++...
T Consensus 97 y~~~GsL~~~~~~~g---~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYG---G-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred ccCCCcHHHHHHHcC---C-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 999999999998642 2 699999999999999999999999 9999999999999999 7999999999998776
Q ss_pred cCC-cceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1084 ALD-THLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1084 ~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
... .........||+.|||||++..+ ....++||||+||++.||+||++||... .....+.-........
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~--- 241 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSL--- 241 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCC---
Confidence 411 11223457899999999999953 3335999999999999999999999743 1111112222222211
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
|.+ +..-++ +..+++.+|+..+|++||||.+++++....+.
T Consensus 242 --P~i--p~~ls~---~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 242 --PEI--PDSLSD---EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred --CCC--CcccCH---HHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 111 112222 34466679999999999999999999755443
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=356.07 Aligned_cols=264 Identities=23% Similarity=0.324 Sum_probs=209.0
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHH--HHHHHHHHHhcC-CCCcccccceEEeCC-eEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDRE--FMAEMETIGKIK-HRNLVPLLGYCKIGE-ERLL 1001 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~l 1001 (1237)
-++|.+.++||.|.||.||+|+.. +++.||||+++..-.. .++ =.+|++.+++++ |||||++.+++.+.+ ..++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 357888899999999999999865 6889999999754322 333 368999999998 999999999999888 9999
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
|||||+ .+|++.++++. +.+++..++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+||.
T Consensus 88 VfE~Md-~NLYqLmK~R~----r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDRN----RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred eHHhhh-hhHHHHHhhcC----CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 999997 89999998873 5899999999999999999999999 999999999999999888999999999997
Q ss_pred eccCCcceeeeccccCCCcCCccccC-ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhc----
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQ-SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREK---- 1156 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 1156 (1237)
+..... ++..+.|..|+|||++. ...|+.++||||+|||++|+.+-++-|.+.. +.+.+......+....
T Consensus 160 v~SkpP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s--E~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 160 VRSKPP---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS--EIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred cccCCC---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc--HHHHHHHHHHHhCCCccccc
Confidence 765443 46678899999999874 5679999999999999999999999998653 2233333222221110
Q ss_pred ----ccccccCccccCCC------CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1157 ----RINEILDPELTMQT------SDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1157 ----~~~~~~~~~l~~~~------~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.+...+.-.++.-. --+....+.++++.+|+++||.+||||.+++++-
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 01111111111000 0112445778899999999999999999999883
No 21
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.8e-39 Score=355.88 Aligned_cols=247 Identities=27% Similarity=0.427 Sum_probs=205.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
++|-+.+.||+|+||+||||+.+ +.+.||+|.+.+.... +.+.+.+|++++++++|||||.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 45777788999999999999887 5778999988654332 34568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+.| +|..++... ..++++.++.|+.+++.||.|||+. +|.|||+||+||+++..|++|+||||+|+.+..
T Consensus 82 ~a~g-~L~~il~~d-----~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD-----GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred hhhh-hHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 9986 999999874 5799999999999999999999999 999999999999999999999999999997654
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
.....+...|||-|||||+..++.|+..+|+||+||++|||++|++||...+ +....+....+
T Consensus 153 --~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~~Lv~~I~~d--------- 215 (808)
T KOG0597|consen 153 --NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------ITQLVKSILKD--------- 215 (808)
T ss_pred --CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HHHHHHHHhcC---------
Confidence 2233467889999999999999999999999999999999999999996432 12222221111
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+... .......+..++...+.+||..|.|-.+++.+
T Consensus 216 ~v~~---p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 216 PVKP---PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred CCCC---cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1111 11334467777889999999999999999876
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=342.06 Aligned_cols=262 Identities=25% Similarity=0.353 Sum_probs=206.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcC-HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQG-DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
..|++..+||.|..++||+|+.. .++.||||++.-..... .+.+.+|+..|+.++||||++++.+|..+...|+||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 46888999999999999999865 57999999997444333 47789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
|.+|++.+.++..... .+++..+..|++++++||.|||.+ |.||||||+.|||++.+|.|||+|||.+..+...
T Consensus 106 Ma~GS~ldIik~~~~~---Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPD---GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hcCCcHHHHHHHHccc---cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 9999999999887653 489999999999999999999999 9999999999999999999999999998655443
Q ss_pred Cccee--eeccccCCCcCCccccCc--cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1086 DTHLS--VSTLAGTPGYVPPEYYQS--FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1086 ~~~~~--~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
..... .....||+.|||||++.. ..|+.|+||||||++..|+.+|..||..-... ......+.... ...
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-----kvLl~tLqn~p--p~~ 252 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-----KVLLLTLQNDP--PTL 252 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-----HHHHHHhcCCC--CCc
Confidence 32222 256789999999999643 46999999999999999999999999743311 11111111111 000
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.-..+ ...........|.+++..|+.+||++|||+++++++
T Consensus 253 ~t~~~-~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 253 LTSGL-DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred ccccC-ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 00000 000001122467788889999999999999999976
No 23
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-39 Score=353.32 Aligned_cols=240 Identities=26% Similarity=0.477 Sum_probs=199.4
Q ss_pred CceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCHH
Q 000889 933 DSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLE 1012 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 1012 (1237)
.+-||.|+.|.||+|+++ ++.|||||+.... ..+++-+++++||||+.+.|+|.....+|||||||..|.|.
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 357999999999999997 7889999885322 24788899999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeee
Q 000889 1013 SVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVS 1092 (1237)
Q Consensus 1013 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~ 1092 (1237)
.+++.. .++.......|..+||.|+.|||.+ .|||||+|.-||||+.+..|||+|||-++......+ ..
T Consensus 201 ~VLka~-----~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST---kM 269 (904)
T KOG4721|consen 201 EVLKAG-----RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKST---KM 269 (904)
T ss_pred HHHhcc-----CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhhh---hh
Confidence 999864 5788888899999999999999999 999999999999999999999999999987765433 35
Q ss_pred ccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCC
Q 000889 1093 TLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSD 1172 (1237)
Q Consensus 1093 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1172 (1237)
.++||..|||||++.....+.|+||||||||+|||+||..||..-.... ..| +.-.. .-.++.+..+
T Consensus 270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----IIw-------GVGsN--sL~LpvPstc 336 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----IIW-------GVGSN--SLHLPVPSTC 336 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----eEE-------eccCC--cccccCcccC
Confidence 6899999999999999999999999999999999999999986421100 000 00001 1223343334
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1173 ETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1173 ~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
+ ..|.-++.+||+..|..||++.+++.+|+-.
T Consensus 337 P---~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 337 P---DGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred c---hHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 4 4566677799999999999999999999644
No 24
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.8e-42 Score=368.08 Aligned_cols=498 Identities=29% Similarity=0.370 Sum_probs=381.2
Q ss_pred cCCCCCCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCC
Q 000889 221 SNCQNLNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGN 300 (1237)
Q Consensus 221 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 300 (1237)
..-..|+.|++++|.++. +...+.++..|++|++++|.+... |.+. ..+..++.|+.++|++...+. ....+.+
T Consensus 42 W~qv~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~~l-p~ai--g~l~~l~~l~vs~n~ls~lp~--~i~s~~~ 115 (565)
T KOG0472|consen 42 WEQVDLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLSQL-PAAI--GELEALKSLNVSHNKLSELPE--QIGSLIS 115 (565)
T ss_pred hhhcchhhhhhccCchhh-ccHhhhcccceeEEEeccchhhhC-CHHH--HHHHHHHHhhcccchHhhccH--HHhhhhh
Confidence 455678999999999863 455677888999999999999844 4433 234578889999998874333 4567888
Q ss_pred CceeeccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEEE
Q 000889 301 LSVITLSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLRELD 380 (1237)
Q Consensus 301 L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~ 380 (1237)
|..|+.++|.+. +++..++.+..|+.|+..+|+++. .|+. +..+.+|..|++.+|+++ ..|+.... .+.|++||
T Consensus 116 l~~l~~s~n~~~--el~~~i~~~~~l~dl~~~~N~i~s-lp~~-~~~~~~l~~l~~~~n~l~-~l~~~~i~-m~~L~~ld 189 (565)
T KOG0472|consen 116 LVKLDCSSNELK--ELPDSIGRLLDLEDLDATNNQISS-LPED-MVNLSKLSKLDLEGNKLK-ALPENHIA-MKRLKHLD 189 (565)
T ss_pred hhhhhcccccee--ecCchHHHHhhhhhhhcccccccc-CchH-HHHHHHHHHhhccccchh-hCCHHHHH-HHHHHhcc
Confidence 999999999884 477888889999999999999984 4443 356788889999999998 77777666 48899999
Q ss_pred cccCcCCCCCCcCcccccccceeeccCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCc
Q 000889 381 LSSNRLTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFT 460 (1237)
Q Consensus 381 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~ 460 (1237)
...|-++ .+|..++.+.+|+-|+|.+|+|.. .+ .|.+++.|++|+++.|.|.-...+...++++|.+|||.+|+++
T Consensus 190 ~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~--lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk 265 (565)
T KOG0472|consen 190 CNSNLLE-TLPPELGGLESLELLYLRRNKIRF--LP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK 265 (565)
T ss_pred cchhhhh-cCChhhcchhhhHHHHhhhccccc--CC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc
Confidence 9999888 678889999999999999999872 33 6788888899999988888444444558888999999999888
Q ss_pred ccCCCCCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCcC---cceeec--cccccc
Q 000889 461 GTIPSGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPN---LSDLVM--WANNLT 535 (1237)
Q Consensus 461 ~~~p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L--~~N~l~ 535 (1237)
..|+.+|- +.+|+.|++++|.|+ ..|..++++ .|+.|-+.+|.+.. +-.++-+-.. |++|.= ..-.++
T Consensus 266 -e~Pde~cl---LrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS 338 (565)
T KOG0472|consen 266 -EVPDEICL---LRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLS 338 (565)
T ss_pred -cCchHHHH---hhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCC
Confidence 67777763 567888888888888 567788888 78888888888863 2222211111 111110 000111
Q ss_pred ---------Ccccccccc---cCCCccEEEccccccccccccccccCCC---ccEEEeecccccccCCccccCccccce-
Q 000889 536 ---------GEIPEGICV---NGGNLETLILNNNHLTGAIPKSIASCTN---MLWVSLSSNQLTGEIPAGIGNLVKLAI- 599 (1237)
Q Consensus 536 ---------~~ip~~~~~---~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~L~~L~~- 599 (1237)
+..|.+.|. ...+.+.|++++=+++ .+|+....-.. ....+++.|++. ++|..+..+..+..
T Consensus 339 ~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~ 416 (565)
T KOG0472|consen 339 QSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTD 416 (565)
T ss_pred CCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHH
Confidence 122333332 2356788999999998 67766555444 778999999999 89999999888654
Q ss_pred EEecCCccccCCCCCCCCCCCCCEEECCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCC
Q 000889 600 LQLGNNSLTGQVPQGLGKCRSLVWLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGI 679 (1237)
Q Consensus 600 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (1237)
+.+++|.+. .+|..++.+++|..|+|++|.+. .+|.+++.+.
T Consensus 417 l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv------------------------------------ 458 (565)
T KOG0472|consen 417 LVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLV------------------------------------ 458 (565)
T ss_pred HHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhh------------------------------------
Confidence 566666666 89999999999999999999997 8888876542
Q ss_pred CccccCCCccccCCCCcceeccceeeeeccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCccccccccccccccc
Q 000889 680 RPERLEGFPMVHSCPSTRIYTGMTMYTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLK 759 (1237)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~ 759 (1237)
.|+.||+|.|+|. .+|+.+..+..|+.+-.++|++....|+.+.+|.
T Consensus 459 --------------------------------~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~ 505 (565)
T KOG0472|consen 459 --------------------------------RLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMR 505 (565)
T ss_pred --------------------------------hhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhh
Confidence 4899999999998 8999999999999999999999966666699999
Q ss_pred CCcEEeCCCCccCCCCCCcccCcccccceecccccccccCCCCCCC-CccCCCcccCC
Q 000889 760 AIGVLDLSHNNFQGSIPGSLGGLSFLSDLDVSNNNLSGIIPSGGQL-TTFPASRYENN 816 (1237)
Q Consensus 760 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~-~~~~~~~~~~n 816 (1237)
+|..|||.+|.+. .+|+.+++|++|++|+|++|+|. .||....+ .|....+|.++
T Consensus 506 nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~iLmkgT~aiL~ylrd 561 (565)
T KOG0472|consen 506 NLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRHQILMKGTAAILSYLRD 561 (565)
T ss_pred hcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHHHHhccChHHHHHHhcc
Confidence 9999999999998 89999999999999999999999 44432222 34444444444
No 25
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-38 Score=346.48 Aligned_cols=295 Identities=25% Similarity=0.337 Sum_probs=215.7
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 1002 (1237)
+.|+..++||+|.||.||+|++. +|+.||+||+.... .....-..+|+.+|++++||||+++.+...+. ...|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 34667788999999999999875 68999999997544 33445678999999999999999999988776 689999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
+|||+ -+|..++... +..+++.+++.++.|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+++
T Consensus 197 FeYMd-hDL~GLl~~p----~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 197 FEYMD-HDLSGLLSSP----GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred Eeccc-chhhhhhcCC----CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeec
Confidence 99998 5788777642 45789999999999999999999999 9999999999999999999999999999988
Q ss_pred ccCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh---hhc--
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH---REK-- 1156 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~-- 1156 (1237)
..... ...+..+-|..|+|||.+.|. .|+.++|+||.|||+.||+.|++.|.+.... ..+....+... ...
T Consensus 269 ~~~~~-~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv--eQl~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 269 TPSGS-APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV--EQLHKIFKLCGSPTEDYWP 345 (560)
T ss_pred cCCCC-cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH--HHHHHHHHHhCCCChhccc
Confidence 65443 235677889999999999875 6999999999999999999999999865321 11111111000 000
Q ss_pred --ccc--cccCccccCCCCCHHH----HHHHHHHHHhccccCCCCCCCHHHHHHH--HHhcccccCCCCCCccCchhhHH
Q 000889 1157 --RIN--EILDPELTMQTSDETE----LYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQVDTEGDSLDSFSLKDTVI 1226 (1237)
Q Consensus 1157 --~~~--~~~~~~l~~~~~~~~~----~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~~~~~~~~~~~~~~~~~~ 1226 (1237)
.+. ..+.+...-.....+. ....++++..++..||.+|.|+.++++. +..-....+...+..+.-.+.+.
T Consensus 346 ~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp~y~~s~E~~ 425 (560)
T KOG0600|consen 346 VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSLPKYPPSHELD 425 (560)
T ss_pred cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccCCCCCcchhHH
Confidence 000 0011000000000010 1345677789999999999999999865 33333334444455555555555
Q ss_pred HHHHHhh
Q 000889 1227 EELRERE 1233 (1237)
Q Consensus 1227 ~~~~~~~ 1233 (1237)
...|..+
T Consensus 426 ~K~r~e~ 432 (560)
T KOG0600|consen 426 AKRRREQ 432 (560)
T ss_pred HHHHHHH
Confidence 5555443
No 26
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=355.34 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=204.8
Q ss_pred CCCCceecccCCeEEEEEEECCCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 930 FSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
+.+...||+|+||+||+|+|. ..||||++..... +..+.|+.|+.++++-+|.||+-+.|||..... .||..+|+
T Consensus 394 v~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCe 470 (678)
T KOG0193|consen 394 VLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCE 470 (678)
T ss_pred hhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhcc
Confidence 456778999999999999997 4599999875433 345679999999999999999999999987666 99999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
|-+|+.+++... ..++..+.+.||.|||+|+.|||.+ +|||||+|..||++.+++.|||+|||++..-.....
T Consensus 471 GsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 471 GSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred Cchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence 999999998764 4789999999999999999999999 999999999999999999999999999976554444
Q ss_pred ceeeeccccCCCcCCccccCcc---ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSF---RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
........|...|||||+++.+ .|++.+||||||+|+|||++|..||..... +.+ +....+..- ..|.
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~---dqI---ifmVGrG~l---~pd~ 614 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR---DQI---IFMVGRGYL---MPDL 614 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh---hhe---EEEeccccc---Cccc
Confidence 4444556688899999999743 689999999999999999999999972211 110 000111100 0010
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
.... ..+..++.+++..||..++++||.+.+++..|+.+..
T Consensus 615 -s~~~---s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 615 -SKIR---SNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred -hhhh---ccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1111 2233456677779999999999999999999988766
No 27
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-38 Score=348.70 Aligned_cols=266 Identities=24% Similarity=0.382 Sum_probs=215.1
Q ss_pred HhCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcC-HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQG-DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
......++++||+|-||.|.+++...+..||||+++...... ..+|.+|+++|.+++||||++++|+|..++..++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 445567889999999999999999888999999998655444 4789999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
||++|+|.+|+...... ........+|+.|||.|++||.+. .+||||+.++|+|+|.++++||+|||+++-+-.
T Consensus 616 YmEnGDLnqFl~aheap---t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELP---TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHhcCcHHHHHHhccCc---ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccccccc
Confidence 99999999999875432 235556678999999999999999 999999999999999999999999999997776
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc--CCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS--GKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.+.+......+-+.+|||||.+..+++++++|||+||+++||+++ ...||.... +++.+.-.....+.... ..+
T Consensus 690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt---~e~vven~~~~~~~~~~-~~~ 765 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT---DEQVVENAGEFFRDQGR-QVV 765 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh---HHHHHHhhhhhcCCCCc-cee
Confidence 676666666778899999999999999999999999999999876 778876422 12222222222111111 111
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
- .. .+.+...+.+++.+||+.+.++||+++++...|++.
T Consensus 766 l---~~---P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 L---SR---PPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred c---cC---CCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1 11 122445677899999999999999999999998764
No 28
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=338.07 Aligned_cols=268 Identities=30% Similarity=0.400 Sum_probs=209.6
Q ss_pred CCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHh--cCCCCcccccceEEeCC----eEEEEEE
Q 000889 931 SADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGK--IKHRNLVPLLGYCKIGE----ERLLVYE 1004 (1237)
Q Consensus 931 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e 1004 (1237)
+..++||+|.||.||+|++. ++.||||++.. ++.+.|.+|-++++. |+|+||++++++-..++ ++++|+|
T Consensus 213 ~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 34567999999999999997 69999998843 456678888888665 58999999999887666 8999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcC------CCCeeecCCCCCCeeeCCCCceEEeeccc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSC------IPHIIHRDMKSSNVLLDENFEARVSDFGM 1078 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~ivHrDikp~NIll~~~~~vkl~DfGl 1078 (1237)
|.+.|+|.+|+... .++|....+|+..+++||+|||+.. +|+|+|||||++|||+..|+++.|+|||+
T Consensus 289 fh~kGsL~dyL~~n------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 289 FHPKGSLCDYLKAN------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eccCCcHHHHHHhc------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 99999999999864 7899999999999999999999763 57899999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccCCCcCCccccCccc-cC-----cccchHHHHHHHHHHHcCCCCCCCCCCCC-----------
Q 000889 1079 ARLVNALDTHLSVSTLAGTPGYVPPEYYQSFR-CT-----TKGDVYSYGVILLELLSGKRPIDPSEFGD----------- 1141 (1237)
Q Consensus 1079 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~sDvwSlGv~l~el~tg~~p~~~~~~~~----------- 1141 (1237)
|.++.........-..+||.+|||||++.+.- +. .+.||||+|.|+|||++....+++.+..+
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 99988665555445588999999999997642 11 35899999999999998665553211111
Q ss_pred CchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCC
Q 000889 1142 DNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEG 1213 (1237)
Q Consensus 1142 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~ 1213 (1237)
.-.+..+.....++ ..+|.++..+..-+.+..+.+.+..||..||+.|.|+.=|.+.+.++...++.
T Consensus 443 hPt~e~mq~~VV~k-----K~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 443 HPTLEEMQELVVRK-----KQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCCHHHHHHHHHhh-----ccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 11111222222222 22333333333335666788889999999999999999999999988777754
No 29
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-39 Score=357.89 Aligned_cols=390 Identities=23% Similarity=0.279 Sum_probs=258.6
Q ss_pred cCC-ccceEEccCCccCCCcc-----ccCCcccEEEcCCCCCCCchhhhccccCCCCCCEEEccCCCCCchhhhhcccCC
Q 000889 175 SCD-RLSYVNLSHNSISGGSL-----HIGPSLLQLDLSGNQISDSALLTYSLSNCQNLNLLNFSDNKLPGKLNATSVNCK 248 (1237)
Q Consensus 175 ~~~-~L~~L~ls~n~l~~~~~-----~~~~~L~~L~Ls~N~i~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 248 (1237)
.|+ +-..|+|++++|..... ..++..+.||+++|.|.+..+ ..|.++++|+.+++..|.++. +|.......
T Consensus 49 ~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~--~~f~nl~nLq~v~l~~N~Lt~-IP~f~~~sg 125 (873)
T KOG4194|consen 49 TCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDF--EFFYNLPNLQEVNLNKNELTR-IPRFGHESG 125 (873)
T ss_pred cCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcH--HHHhcCCcceeeeeccchhhh-ccccccccc
Confidence 455 34567888887766321 223455667777777776543 234677777777777777753 344344445
Q ss_pred CccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCCCceeeccCccccCcccchhhcccccceE
Q 000889 249 SISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVITLSQNGLSGTEFPASLKNCQLLET 328 (1237)
Q Consensus 249 ~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~ 328 (1237)
+|+.|+|.+|.|+..-...+ ..++.|+.||||.|.|+ .++...|..-.++++|+|++|+|+..+ ...|.++.+|..
T Consensus 126 hl~~L~L~~N~I~sv~se~L--~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~-~~~F~~lnsL~t 201 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEEL--SALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLE-TGHFDSLNSLLT 201 (873)
T ss_pred ceeEEeeeccccccccHHHH--HhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccc-cccccccchhee
Confidence 57777777777764333332 22456777777777776 444455666667777777777776654 345677777777
Q ss_pred EEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEEEcccCcCCCCCCcCcccccccceeeccCc
Q 000889 329 LNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLRELDLSSNRLTGELPSTFASCSSLHSLNLGSN 408 (1237)
Q Consensus 329 L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 408 (1237)
|.|+.|.++ .+|...|.++++|+.|+|..|+|. .+.--.|+++++|+.|.|..|.|......+|..+.++++|+|+.|
T Consensus 202 lkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~ir-ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N 279 (873)
T KOG4194|consen 202 LKLSRNRIT-TLPQRSFKRLPKLESLDLNRNRIR-IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETN 279 (873)
T ss_pred eecccCccc-ccCHHHhhhcchhhhhhcccccee-eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccc
Confidence 777777777 566666777777777777777776 444455666777777777777777666667777777777777777
Q ss_pred cccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecccCceeee
Q 000889 409 MLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNNYLSG 488 (1237)
Q Consensus 409 ~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~ 488 (1237)
+++ .....++.++++|+.|+|++|.|..+.+.++.-+++|++|+|++|+|+...+..| ..+..|++|.|++|++..
T Consensus 280 ~l~-~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf---~~L~~Le~LnLs~Nsi~~ 355 (873)
T KOG4194|consen 280 RLQ-AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSF---RVLSQLEELNLSHNSIDH 355 (873)
T ss_pred hhh-hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHH---HHHHHhhhhcccccchHH
Confidence 776 3455666677777777777777777777777777777777777777775555544 456667777777777776
Q ss_pred cccccccccccccEecccCCccccCCCc---cccCCcCcceeecccccccCcccccccccCCCccEEEcccccccccccc
Q 000889 489 TVPLELGSCKNLKTIDLSFNSLAGPVPS---EIWSLPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPK 565 (1237)
Q Consensus 489 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~ 565 (1237)
+-...|..+++|++|||++|.|+..+.+ .|.+|++|+.|++.+|++. .||...|.++..|++|||.+|.|..+-|.
T Consensus 356 l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~krAfsgl~~LE~LdL~~NaiaSIq~n 434 (873)
T KOG4194|consen 356 LAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNAIASIQPN 434 (873)
T ss_pred HHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchhhhccCcccceecCCCCcceeeccc
Confidence 6666777777777777777777654432 4566777777777777776 66766667777777777777777666666
Q ss_pred ccccCCCccEEEee
Q 000889 566 SIASCTNMLWVSLS 579 (1237)
Q Consensus 566 ~~~~l~~L~~L~Ls 579 (1237)
+|..+ .|++|.+.
T Consensus 435 AFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 435 AFEPM-ELKELVMN 447 (873)
T ss_pred ccccc-hhhhhhhc
Confidence 66666 66665543
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=357.06 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=205.6
Q ss_pred HHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc----cC-cCHHHHHHHHHHHHhcC-CCCcccccceEEeCC
Q 000889 925 EATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV----TG-QGDREFMAEMETIGKIK-HRNLVPLLGYCKIGE 997 (1237)
Q Consensus 925 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 997 (1237)
...++|.+.+.||+|+||+|+.|++. ++..||+|.+.+. .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34568999999999999999999876 6799999966542 11 23445678999999999 999999999999999
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC-CceEEeec
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN-FEARVSDF 1076 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~-~~vkl~Df 1076 (1237)
..++||||+.||+|.+++... .++.+..+.+++.|++.|++|+|+. +|+||||||+||+++.+ +.+||+||
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DF 165 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDF 165 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecc
Confidence 999999999999999999873 4788899999999999999999999 99999999999999999 99999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccc-cC-cccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFR-CT-TKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR 1154 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1154 (1237)
|++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+... .......
T Consensus 166 G~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~------~~~l~~k--- 234 (370)
T KOG0583|consen 166 GLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN------VPNLYRK--- 234 (370)
T ss_pred ccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc------HHHHHHH---
Confidence 9998774 2223446789999999999999877 75 78999999999999999999998521 1111111
Q ss_pred hcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1155 EKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1155 ~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+....+..+.... ..++..++.+|+..+|.+|+|+.+++++
T Consensus 235 ------i~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 235 ------IRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred ------HhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 1222222222220 2355678889999999999999999944
No 31
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-38 Score=381.06 Aligned_cols=271 Identities=27% Similarity=0.448 Sum_probs=218.3
Q ss_pred CCCCCceecccCCeEEEEEEECC--CC----EEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD--GS----VVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~--~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
+.+..+.||+|+||.||.|...+ +. .||+|++.+... +...+|.+|..+|+.++|||||+++|.|.+....++
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 44567789999999999998763 43 489998876543 445679999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhcC--CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1002 VYEYMKWGSLESVLHDRAKG--GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++|||+||+|..|+++.+.. ....+...+...++.|||+|+.||+++ ++|||||.++|+|+++...|||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchh
Confidence 99999999999999876332 234678899999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+.....+.+.......-+..|||||.+..+.++.|+|||||||++||++| |..||..... . ........+
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-----~-~v~~~~~~g--- 920 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-----F-EVLLDVLEG--- 920 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-----H-HHHHHHHhC---
Confidence 96655554444333345679999999999999999999999999999999 8999874321 1 111112222
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCCCCCcc
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGDSLDSF 1219 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~~~~~~ 1219 (1237)
.++..+.++++. +.+++.+||+.+|++||++..+++.+..+..+........+
T Consensus 921 -----gRL~~P~~CP~~---ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~~~~ 973 (1025)
T KOG1095|consen 921 -----GRLDPPSYCPEK---LYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIYGPL 973 (1025)
T ss_pred -----CccCCCCCCChH---HHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCccccc
Confidence 244445555554 45788899999999999999999998887766655554433
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=343.93 Aligned_cols=248 Identities=27% Similarity=0.377 Sum_probs=203.5
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.|+..+.||+|+||.||+|.+. .++.||+|.+.-... ....++.+|+.++.+++++||.++|+.+..+...|++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 4666678999999999999876 588999999874433 33567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
.||++.+.++.. ..+.+.....++.++..|+.|||.+ +.+|||||+.||++..+|.||++|||.+.......
T Consensus 94 ~gGsv~~lL~~~-----~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 94 GGGSVLDLLKSG-----NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred cCcchhhhhccC-----CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999998753 3447777778899999999999999 99999999999999999999999999998776433
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
.+..+++||+.|||||++....|+.|+||||||++.+||.+|.+|+....... ..-.+.+-..|.+
T Consensus 166 --~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr------------vlflIpk~~PP~L 231 (467)
T KOG0201|consen 166 --KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR------------VLFLIPKSAPPRL 231 (467)
T ss_pred --hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce------------EEEeccCCCCCcc
Confidence 23378899999999999998899999999999999999999999986432100 0011122222222
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. .....+.+++..|+.++|+.||+|.+++++
T Consensus 232 ~~-----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 232 DG-----DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cc-----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 22 233456777889999999999999999986
No 33
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-39 Score=355.77 Aligned_cols=394 Identities=26% Similarity=0.287 Sum_probs=256.3
Q ss_pred CccEEeCCCCcCCCCcccccccC-C-CCCceeeccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCc
Q 000889 275 SLKYLDLSHNNFTGKFSNLDFGR-C-GNLSVITLSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLK 352 (1237)
Q Consensus 275 ~L~~L~Ls~N~l~~~~~~~~~~~-l-~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 352 (1237)
.-..||++++.+.. +....+.+ + +.-+.|++++|+|+.+. +..|.++++|++++|.+|.++ .||.+ .+...+|+
T Consensus 53 ~~~lldcs~~~lea-~~~~~l~g~lp~~t~~LdlsnNkl~~id-~~~f~nl~nLq~v~l~~N~Lt-~IP~f-~~~sghl~ 128 (873)
T KOG4194|consen 53 NTRLLDCSDRELEA-IDKSRLKGFLPSQTQTLDLSNNKLSHID-FEFFYNLPNLQEVNLNKNELT-RIPRF-GHESGHLE 128 (873)
T ss_pred CceeeecCcccccc-ccccccCCcCccceeeeeccccccccCc-HHHHhcCCcceeeeeccchhh-hcccc-ccccccee
Confidence 34567777777652 11111111 1 12334555555555543 334555555555555555555 44442 12223355
Q ss_pred EEecCCCcCCCCCchhHhhhcCCCcEEEcccCcCCCCCCcCcccccccceeeccCccccCcccchhccccccceEEeccC
Q 000889 353 QLSLAHNQFAGEIPPELGQACGTLRELDLSSNRLTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPF 432 (1237)
Q Consensus 353 ~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~ 432 (1237)
.|+|.+|.|+ ++..+-...++.|+.||||.|.|+.+.-..|..-.++++|+|++|+|
T Consensus 129 ~L~L~~N~I~-sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~I---------------------- 185 (873)
T KOG4194|consen 129 KLDLRHNLIS-SVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRI---------------------- 185 (873)
T ss_pred EEeeeccccc-cccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccc----------------------
Confidence 5555555555 33333333445555555555555544334444444455555555544
Q ss_pred CCCCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecccCceeeecccccccccccccEecccCCcccc
Q 000889 433 NNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAG 512 (1237)
Q Consensus 433 N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 512 (1237)
+..-...|.++.+|..|.|+.|+|+...+..| +++++|+.|+|..|+|....-.+|.++++|+.|.|..|.|..
T Consensus 186 ---t~l~~~~F~~lnsL~tlkLsrNrittLp~r~F---k~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~k 259 (873)
T KOG4194|consen 186 ---TTLETGHFDSLNSLLTLKLSRNRITTLPQRSF---KRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISK 259 (873)
T ss_pred ---cccccccccccchheeeecccCcccccCHHHh---hhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCccc
Confidence 44444555555555555555555553333333 345555555555555554445567778888888888888887
Q ss_pred CCCccccCCcCcceeecccccccCcccccccccCCCccEEEccccccccccccccccCCCccEEEeecccccccCCcccc
Q 000889 513 PVPSEIWSLPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIG 592 (1237)
Q Consensus 513 ~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 592 (1237)
.....|+.+.++++|+|..|++. .+.++...+++.|+.|+||+|.|..+-++++.-+++|++|+|++|+|+...+..|.
T Consensus 260 L~DG~Fy~l~kme~l~L~~N~l~-~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~ 338 (873)
T KOG4194|consen 260 LDDGAFYGLEKMEHLNLETNRLQ-AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFR 338 (873)
T ss_pred ccCcceeeecccceeecccchhh-hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHH
Confidence 77778888888888888888887 67777777888899999999998888888888899999999999999977788899
Q ss_pred CccccceEEecCCccccCCCCCCCCCCCCCEEECCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCC
Q 000889 593 NLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGG 672 (1237)
Q Consensus 593 ~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1237)
.|..|+.|+|++|+++..--..|..+++|+.|||++|.|++.|-..
T Consensus 339 ~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDa---------------------------------- 384 (873)
T KOG4194|consen 339 VLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDA---------------------------------- 384 (873)
T ss_pred HHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecc----------------------------------
Confidence 9999999999999998666677888899999999999888544321
Q ss_pred cccccCCCccccCCCccccCCCCcceeccceeeeeccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccc
Q 000889 673 LVEFEGIRPERLEGFPMVHSCPSTRIYTGMTMYTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIP 752 (1237)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P 752 (1237)
...|.++.+|+.|+|.+|+|....-..|.+|.+|++|||.+|.+...-|
T Consensus 385 -------------------------------a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 385 -------------------------------AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred -------------------------------hhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecc
Confidence 0124445577888888888874444678888888888888888876667
Q ss_pred cccccccCCcEEeCCC
Q 000889 753 DSFGGLKAIGVLDLSH 768 (1237)
Q Consensus 753 ~~~~~L~~L~~L~Ls~ 768 (1237)
..|..+ .|++|.+..
T Consensus 434 nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 434 NAFEPM-ELKELVMNS 448 (873)
T ss_pred cccccc-hhhhhhhcc
Confidence 777777 777776643
No 34
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-38 Score=357.78 Aligned_cols=260 Identities=26% Similarity=0.424 Sum_probs=207.0
Q ss_pred CCCCceecccCCeEEEEEEECC--C--CE-EEEEEecc---ccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 930 FSADSMIGSGGFGEVYKAQLRD--G--SV-VAIKKLIH---VTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~--~--~~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
....++||+|+||.||+|+++. + .. ||||.... .......+|.+|+++|++++|||||++||++......++
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~i 238 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLML 238 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEE
Confidence 3445899999999999998763 2 23 89998874 234456789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
|||+|.||+|++|+++.. ..++..+..+++.+.|.||+|||++ +++||||.++|+|++.++.+||+|||+++.
T Consensus 239 vmEl~~gGsL~~~L~k~~----~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 239 VMELCNGGSLDDYLKKNK----KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEEecCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999998753 3699999999999999999999999 999999999999999999999999999875
Q ss_pred eccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
.. ..........-+..|+|||.+....|+.++|||||||++||+++ |..||.+.... .........
T Consensus 312 ~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~------~v~~kI~~~----- 378 (474)
T KOG0194|consen 312 GS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY------EVKAKIVKN----- 378 (474)
T ss_pred Cc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH------HHHHHHHhc-----
Confidence 43 11111112235679999999999999999999999999999999 88898754321 111111011
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCC
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGD 1214 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~ 1214 (1237)
..+.+.+...+. .+..++.+||..+|++||+|.++.+.++.+....+..
T Consensus 379 --~~r~~~~~~~p~---~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 379 --GYRMPIPSKTPK---ELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred --CccCCCCCCCHH---HHHHHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 111222223333 4456666999999999999999999999988877654
No 35
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.4e-37 Score=357.21 Aligned_cols=264 Identities=26% Similarity=0.430 Sum_probs=203.8
Q ss_pred hCCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccC-cCHHHHHHHHHHHHhc-CCCCcccccceEEeC-C
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTG-QGDREFMAEMETIGKI-KHRNLVPLLGYCKIG-E 997 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 997 (1237)
.++|++.++||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+++++++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 457899999999999999999752 356799998864322 2235688999999999 899999999988754 4
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcC--------------------------------------------------------
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKG-------------------------------------------------------- 1021 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 1021 (1237)
..++||||+++|+|.+++......
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 578999999999999999753210
Q ss_pred -CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeeeccccCCCc
Q 000889 1022 -GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGY 1100 (1237)
Q Consensus 1022 -~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y 1100 (1237)
....+++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...............+++.|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 013578888999999999999999999 9999999999999999999999999999865433322222344567889
Q ss_pred CCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHH
Q 000889 1101 VPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQY 1179 (1237)
Q Consensus 1101 ~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 1179 (1237)
||||++.+..++.++|||||||++|||++ |..||...... .. +......... ... +.. ....+
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--~~---~~~~~~~~~~------~~~--~~~---~~~~l 306 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--EE---FCQRLKDGTR------MRA--PEN---ATPEI 306 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--HH---HHHHHhcCCC------CCC--CCC---CCHHH
Confidence 99999998899999999999999999997 99998753221 11 1111111110 011 111 12356
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1180 LRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1180 ~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
.+++.+||+.+|++|||+.++++.|+++..
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 788899999999999999999999998654
No 36
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=6.2e-37 Score=340.68 Aligned_cols=254 Identities=23% Similarity=0.319 Sum_probs=202.1
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
..++|++.+.||+|+||.||+|+-+ +|..+|.|++.+.. ..+.+++..|-.+|...++|.||++|..|++.+..|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4568999999999999999999876 58999999997543 3345678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
||||++||++..+|... ..+++..++.++.+++-|++.+|+. |+|||||||+|+|||..|++||+|||++.-
T Consensus 219 iMEylPGGD~mTLL~~~-----~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK-----DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred EEEecCCccHHHHHHhc-----CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccch
Confidence 99999999999999764 5899999999999999999999999 999999999999999999999999999852
Q ss_pred ecc----------------------CCcc-----ee------------------eeccccCCCcCCccccCccccCcccc
Q 000889 1082 VNA----------------------LDTH-----LS------------------VSTLAGTPGYVPPEYYQSFRCTTKGD 1116 (1237)
Q Consensus 1082 ~~~----------------------~~~~-----~~------------------~~~~~gt~~y~aPE~~~~~~~~~~sD 1116 (1237)
... .+.. .. ....+|||.|||||++.+..|+..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 211 0000 00 12467999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCCCCCCCCC-chHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCC
Q 000889 1117 VYSYGVILLELLSGKRPIDPSEFGDD-NNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRP 1195 (1237)
Q Consensus 1117 vwSlGv~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1195 (1237)
+||+|||||||+.|.+||..+...+. ..+..|...+. . +...... .+..++|.+|+. ||++|.
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~------f------P~~~~~s---~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK------F------PEEVDLS---DEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc------C------CCcCccc---HHHHHHHHHHhc-CHHHhc
Confidence 99999999999999999986543221 11222221111 1 0011111 345577778888 999998
Q ss_pred C---HHHHHHH
Q 000889 1196 T---MIQVMAM 1203 (1237)
Q Consensus 1196 t---~~ell~~ 1203 (1237)
- +.||.+|
T Consensus 435 G~~G~~EIK~H 445 (550)
T KOG0605|consen 435 GSKGAEEIKKH 445 (550)
T ss_pred CcccHHHHhcC
Confidence 5 6666655
No 37
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-37 Score=352.52 Aligned_cols=242 Identities=27% Similarity=0.376 Sum_probs=197.2
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 1001 (1237)
-++|...++||+|+||.|++|..+ +++.+|||.+++.. ..+.+..+.|.+++.... ||.++.++.+|++.++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 457899999999999999999988 57899999987543 344556788999988875 9999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
||||+.||++..+.+. ..+++..+..++..|+.||.|||++ +|||||||.+|||+|.+|++||+|||+++.
T Consensus 447 vmey~~Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEecCCCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence 9999999994443332 5799999999999999999999999 999999999999999999999999999985
Q ss_pred eccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
.- ......++.||||.|||||++.+..|+.++|+|||||+||||+.|..||.+...+ +....|
T Consensus 518 ~m--~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe---------------e~FdsI 580 (694)
T KOG0694|consen 518 GM--GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE---------------EVFDSI 580 (694)
T ss_pred cC--CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH---------------HHHHHH
Confidence 43 2233567899999999999999999999999999999999999999999854311 111111
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTM 1197 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 1197 (1237)
+..+..-+.. ...+.+.|+.+++.++|++|.-+
T Consensus 581 ~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 581 VNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred hcCCCCCCCc---ccHHHHHHHHHHhccCcccccCC
Confidence 1111111111 22345677789999999999865
No 38
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=324.70 Aligned_cols=248 Identities=27% Similarity=0.409 Sum_probs=208.9
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
|.++.+||+|+||.||+|.++ .|..+|+|++.. ..+.+++..|+.+|++++.|+||++||.+......|+|||||.-
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 556778999999999999887 589999998853 34678899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+..+.++.++ +++.+.+...++.+.++||+|||.. .-+|||||+.|||+..+|++|++|||.|..+. ++-
T Consensus 113 GSiSDI~R~R~----K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT--DTM 183 (502)
T KOG0574|consen 113 GSISDIMRARR----KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLT--DTM 183 (502)
T ss_pred CcHHHHHHHhc----CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhh--hhH
Confidence 99999998775 4799999999999999999999999 88999999999999999999999999997654 333
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
.+.++..|||.|||||++..-.|..++||||+|++..||..|++||..-.. ...+.-+-....+.
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---------------MRAIFMIPT~PPPT 248 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP---------------MRAIFMIPTKPPPT 248 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc---------------cceeEeccCCCCCC
Confidence 445778999999999999999999999999999999999999999863211 11111111111111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
....+....+|-+++++|+-+.|++|.|+.++.++
T Consensus 249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 12234456678889999999999999999999886
No 39
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-37 Score=328.10 Aligned_cols=248 Identities=22% Similarity=0.375 Sum_probs=208.2
Q ss_pred hCCCCCCceecccCCeEEEEEEE-CCCCEEEEEEeccccCcCHH---HHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQL-RDGSVVAIKKLIHVTGQGDR---EFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
.++|++.+.||+|.||.|-+|+. ..|+.||||.+.+....+.+ .+.+|+++|..++||||+.+|.+|+..+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 45788888999999999999976 57999999999876655554 467899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||..+|.|++|+.++ +.+++.+++.++.||+.|+.|+|.+ +|||||+|.+|||+|.++.+||+|||++-.+
T Consensus 132 MEYaS~GeLYDYiSer-----~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly 203 (668)
T KOG0611|consen 132 MEYASGGELYDYISER-----GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLY 203 (668)
T ss_pred EEecCCccHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhh
Confidence 9999999999999876 5799999999999999999999999 9999999999999999999999999999776
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccC-cccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCT-TKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
.... -..++||++-|.+||.+.+..|. ..+|.||+||++|-++.|..||++... ....+ ++
T Consensus 204 ~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh------k~lvr---------QI 265 (668)
T KOG0611|consen 204 ADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH------KRLVR---------QI 265 (668)
T ss_pred cccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH------HHHHH---------Hh
Confidence 5322 23578999999999999998885 679999999999999999999986431 11122 22
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
-...+..+.... ....+|++|+.++|++|.|+.++..+-
T Consensus 266 s~GaYrEP~~PS----dA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 266 SRGAYREPETPS----DASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred hcccccCCCCCc----hHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 222222222222 334677899999999999999999884
No 40
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-36 Score=325.64 Aligned_cols=271 Identities=25% Similarity=0.405 Sum_probs=215.6
Q ss_pred hCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhc--CCCCcccccceEEeC----CeEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKI--KHRNLVPLLGYCKIG----EERL 1000 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~~~~ 1000 (1237)
..+.++.+.||+|.||+||+|.++ |+.||||.+.. .+++.+.+|.++++.. +|+||..+++.-..+ .+.|
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 345677889999999999999998 89999999864 4566788888887764 999999999986544 3679
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeeeCCCCceEEee
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHS-----CIPHIIHRDMKSSNVLLDENFEARVSD 1075 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~ivHrDikp~NIll~~~~~vkl~D 1075 (1237)
+|.+|.+.|+|.||+.. ..++...+.+++..+|.||++||.. .+|.|+|||||+.|||+.+++.+.|+|
T Consensus 286 LvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 99999999999999986 3789999999999999999999965 467899999999999999999999999
Q ss_pred cccceeeccCCc--ceeeeccccCCCcCCccccCccc----c-C-cccchHHHHHHHHHHHc----------CCCCCCCC
Q 000889 1076 FGMARLVNALDT--HLSVSTLAGTPGYVPPEYYQSFR----C-T-TKGDVYSYGVILLELLS----------GKRPIDPS 1137 (1237)
Q Consensus 1076 fGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~----~-~-~~sDvwSlGv~l~el~t----------g~~p~~~~ 1137 (1237)
+|+|........ ....+..+||.+|||||++...- + + ..+||||||.|+||+.. -+.||..-
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 999987765432 23346688999999999996431 1 1 35899999999999975 24566543
Q ss_pred CCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCC
Q 000889 1138 EFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEG 1213 (1237)
Q Consensus 1138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~ 1213 (1237)
-..++ .+..+ ++-.-.+.+.|..+..+...+.+..+.+++..||..+|..|-|+-.+.+.|.++....++
T Consensus 440 Vp~DP-s~eeM-----rkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~ek 509 (513)
T KOG2052|consen 440 VPSDP-SFEEM-----RKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSDEK 509 (513)
T ss_pred CCCCC-CHHHH-----hcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcChhh
Confidence 22211 11111 111122334566777777788999999999999999999999999999999998864433
No 41
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-37 Score=335.54 Aligned_cols=264 Identities=25% Similarity=0.291 Sum_probs=206.4
Q ss_pred HHHHHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--------------cCHHHHHHHHHHHHhcCCCCc
Q 000889 922 HLLEATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--------------QGDREFMAEMETIGKIKHRNL 986 (1237)
Q Consensus 922 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~ni 986 (1237)
+-.+..+.|++.+.||+|.||.|-+|+.. +++.||+|.+.+... ...+...+|+.+|++++||||
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 33445678999999999999999999987 688999998853221 112467899999999999999
Q ss_pred ccccceEEe--CCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCee
Q 000889 987 VPLLGYCKI--GEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVL 1064 (1237)
Q Consensus 987 v~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIl 1064 (1237)
|+++++..+ .+..|||+|||..|.+...-.. ...+.+.++++++.+++.||+|||.+ +||||||||+|+|
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d-----~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLL 242 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD-----KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLL 242 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccCCCC-----cccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheE
Confidence 999999865 4678999999999887543211 12389999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeecccceeeccCC---cceeeeccccCCCcCCccccCccc----cCcccchHHHHHHHHHHHcCCCCCCCC
Q 000889 1065 LDENFEARVSDFGMARLVNALD---THLSVSTLAGTPGYVPPEYYQSFR----CTTKGDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1065 l~~~~~vkl~DfGla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
++++|+|||+|||.+....... ........+|||.|||||...++. .+.+.||||+||++|.|+.|+.||...
T Consensus 243 l~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 243 LSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred EcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence 9999999999999998663221 122233478999999999987632 356889999999999999999999643
Q ss_pred CCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1138 EFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
.. .+...+|+...+..+.. ++...++.++|.+++.+||+.|.+..+|..+..--..
T Consensus 323 ~~---------------~~l~~KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 323 FE---------------LELFDKIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred hH---------------HHHHHHHhcCcccCCCc-ccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 21 11223344444443332 2344567788999999999999999999988755443
No 42
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.9e-36 Score=345.66 Aligned_cols=266 Identities=23% Similarity=0.380 Sum_probs=202.1
Q ss_pred CCCCCCceecccCCeEEEEEEECC-----------------CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccc
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-----------------GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPL 989 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l 989 (1237)
++|++.++||+|+||.||+|++++ +..||+|.+..... ....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999998642 23699998864322 224568899999999999999999
Q ss_pred cceEEeCCeEEEEEEeccCCCHHHHHhhhhcC--------------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 000889 990 LGYCKIGEERLLVYEYMKWGSLESVLHDRAKG--------------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIH 1055 (1237)
Q Consensus 990 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 1055 (1237)
++++.+.+..++||||+++|+|.+++...... ....+++..+.+++.|++.||+|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 99999999999999999999999998653211 113568888999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc--CCCC
Q 000889 1056 RDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS--GKRP 1133 (1237)
Q Consensus 1056 rDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t--g~~p 1133 (1237)
|||||+||+++.++.+||+|||+++.....+.........++..|||||++.+..++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999986654333222234456789999999988889999999999999999987 5566
Q ss_pred CCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1134 IDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
|.... ................ ..... ..+ +.....+.+++.+||+.+|++|||+.++.+.|++
T Consensus 242 ~~~~~---~~~~~~~~~~~~~~~~-~~~~~---~~~---~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELT---DEQVIENAGEFFRDQG-RQVYL---FRP---PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCC---HHHHHHHHHHHhhhcc-ccccc---cCC---CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 65322 1111111111111110 00000 000 1122457788899999999999999999998864
No 43
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-37 Score=308.48 Aligned_cols=250 Identities=26% Similarity=0.388 Sum_probs=206.3
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
.++|++.+.||+|.||.||.|+.+ ++-.||+|++.+.. ..-.+++.+|+++-..++||||.++|++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 346889999999999999999876 57789999987543 23456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
+||.++|++...++... ..++++.....+..|+|.|+.|+|.. +|+||||||+|+|++.++.+||+|||.+..-
T Consensus 101 lEya~~gel~k~L~~~~---~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGR---MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEecCCchHHHHHHhcc---cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 99999999999998643 35788888899999999999999999 9999999999999999999999999999644
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
. ..+..+.|||..|.|||+..+..++.++|+|++|++.||++.|.+||...... ..+. ++.
T Consensus 175 p----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-----etYk----------rI~ 235 (281)
T KOG0580|consen 175 P----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-----ETYK----------RIR 235 (281)
T ss_pred C----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH-----HHHH----------HHH
Confidence 3 22346789999999999999999999999999999999999999999753310 0111 111
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
..++..+...+ ....++|.+|+..+|.+|.+..|++++-
T Consensus 236 k~~~~~p~~is---~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 236 KVDLKFPSTIS---GGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred HccccCCcccC---hhHHHHHHHHhccCccccccHHHHhhhH
Confidence 11111111122 2445788899999999999999999873
No 44
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.8e-37 Score=345.36 Aligned_cols=249 Identities=27% Similarity=0.352 Sum_probs=207.3
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
.+.|++.+.||.|+.|.|.+|++. +|+.+|||.+.+.. ......+.+|+-+|+-+.||||+++|+++....++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 356888899999999999999876 69999999887542 22244578999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
.||++||.|.+++..+ +++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+.+||+|||+|..-
T Consensus 91 lEyv~gGELFdylv~k-----G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe 162 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK-----GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE 162 (786)
T ss_pred EEecCCchhHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc
Confidence 9999999999999864 5789999999999999999999999 9999999999999999999999999999743
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccC-cccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCT-TKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
.. ..-..+.||.|.|.|||++.|..|. .++||||.|||+|.|++|+.||+. +++.....+..++
T Consensus 163 ~~---gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD------dNir~LLlKV~~G------ 227 (786)
T KOG0588|consen 163 VP---GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD------DNIRVLLLKVQRG------ 227 (786)
T ss_pred cC---CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC------ccHHHHHHHHHcC------
Confidence 32 2234678999999999999998874 789999999999999999999973 3444333332222
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.+.++...+. +..+++.+|+.+||++|.|+.||++|-
T Consensus 228 ---~f~MPs~Is~---eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 228 ---VFEMPSNISS---EAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred ---cccCCCcCCH---HHHHHHHHHhccCccccccHHHHhhCc
Confidence 2223322333 345677799999999999999999984
No 45
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-36 Score=326.82 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=205.9
Q ss_pred CCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcC---HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQG---DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
.|+..+.||+|.-|+||+++.++ +..+|+|++.+..... ..+...|-+|++.++||.++.+|+.++.+...|+|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 35667889999999999999885 5889999997544332 3346679999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
||+||+|..+++++. ++.+++..++.++.+++-||+|||.. |||+||+||+||||.++|++.++||.++..+..
T Consensus 158 yCpGGdL~~LrqkQp---~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQP---GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred cCCCccHHHHHhhCC---CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 999999999988754 46899999999999999999999999 999999999999999999999999999764311
Q ss_pred CC---------------------------------c---------------------ceeeeccccCCCcCCccccCccc
Q 000889 1085 LD---------------------------------T---------------------HLSVSTLAGTPGYVPPEYYQSFR 1110 (1237)
Q Consensus 1085 ~~---------------------------------~---------------------~~~~~~~~gt~~y~aPE~~~~~~ 1110 (1237)
.. . ..+...++||..|.|||++.|..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 00 0 01123467999999999999999
Q ss_pred cCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccC
Q 000889 1111 CTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDR 1190 (1237)
Q Consensus 1111 ~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~d 1190 (1237)
++.++|+|+|||++|||+.|..||.+..- ...+..++..++..+... .......++|++.+.+|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~---------------~~Tl~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNN---------------KETLRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCc---------------hhhHHHHhcCCCcCCCCC-cchhHHHHHHHHHhccC
Confidence 99999999999999999999999986532 122233333333333222 23345678888999999
Q ss_pred CCCCCC----HHHHHHH
Q 000889 1191 PFKRPT----MIQVMAM 1203 (1237)
Q Consensus 1191 P~~RPt----~~ell~~ 1203 (1237)
|.+|.- ++||.++
T Consensus 376 P~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRH 392 (459)
T ss_pred hhhhhccccchHHhhcC
Confidence 999998 8888877
No 46
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.8e-40 Score=350.44 Aligned_cols=472 Identities=29% Similarity=0.434 Sum_probs=327.8
Q ss_pred CccEEeCCCCcCCCCcccccccCCCCCceeeccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEE
Q 000889 275 SLKYLDLSHNNFTGKFSNLDFGRCGNLSVITLSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQL 354 (1237)
Q Consensus 275 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 354 (1237)
.|+.|.+++|.++... .++.++..|.+|++++|+++ ..|++++.+..++.|+.++|+++ .+|.. .+.+.+|+.|
T Consensus 46 ~l~~lils~N~l~~l~--~dl~nL~~l~vl~~~~n~l~--~lp~aig~l~~l~~l~vs~n~ls-~lp~~-i~s~~~l~~l 119 (565)
T KOG0472|consen 46 DLQKLILSHNDLEVLR--EDLKNLACLTVLNVHDNKLS--QLPAAIGELEALKSLNVSHNKLS-ELPEQ-IGSLISLVKL 119 (565)
T ss_pred chhhhhhccCchhhcc--HhhhcccceeEEEeccchhh--hCCHHHHHHHHHHHhhcccchHh-hccHH-Hhhhhhhhhh
Confidence 4666677777665322 24566777777777777774 46777888888888888888887 55554 4677788888
Q ss_pred ecCCCcCCCCCchhHhhhcCCCcEEEcccCcCCCCCCcCcccccccceeeccCccccCcccchhccccccceEEeccCCC
Q 000889 355 SLAHNQFAGEIPPELGQACGTLRELDLSSNRLTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNN 434 (1237)
Q Consensus 355 ~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 434 (1237)
++++|++. ++|++++.. -.|+.|+..+|+++ ..|..+.++.+|..|++.+|++.. .++..+. ++.|++|++..|.
T Consensus 120 ~~s~n~~~-el~~~i~~~-~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~-m~~L~~ld~~~N~ 194 (565)
T KOG0472|consen 120 DCSSNELK-ELPDSIGRL-LDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIA-MKRLKHLDCNSNL 194 (565)
T ss_pred hcccccee-ecCchHHHH-hhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHH-HHHHHhcccchhh
Confidence 88888887 778777764 57888888888887 567777778888888888888763 3333333 7777777777777
Q ss_pred CCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecccCceeeeccccccc-ccccccEecccCCccccC
Q 000889 435 ISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNNYLSGTVPLELG-SCKNLKTIDLSFNSLAGP 513 (1237)
Q Consensus 435 i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~Ls~N~l~~~ 513 (1237)
++ .+|..++.+.+|..|+|..|+|. ..| .| .+.+.|++|+++.|+|. .+|.+.+ ++.+|.+|||..|+++ .
T Consensus 195 L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef---~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e 266 (565)
T KOG0472|consen 195 LE-TLPPELGGLESLELLYLRRNKIR-FLP-EF---PGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-E 266 (565)
T ss_pred hh-cCChhhcchhhhHHHHhhhcccc-cCC-CC---CccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-c
Confidence 76 56667777777777777777776 455 34 45566777777777776 3444433 6777777777777777 6
Q ss_pred CCccccCCcCcceeecccccccCcccccccccCCCccEEEccccccccccccccccCC---CccEEE-------eeccc-
Q 000889 514 VPSEIWSLPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCT---NMLWVS-------LSSNQ- 582 (1237)
Q Consensus 514 ~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~---~L~~L~-------Ls~N~- 582 (1237)
.|.++.-+.+|+.||+++|.++ .+|... .++ .|+.|-+.+|.+..+ -..+-+.. -|++|. +|.-.
T Consensus 267 ~Pde~clLrsL~rLDlSNN~is-~Lp~sL-gnl-hL~~L~leGNPlrTi-Rr~ii~~gT~~vLKyLrs~~~~dglS~se~ 342 (565)
T KOG0472|consen 267 VPDEICLLRSLERLDLSNNDIS-SLPYSL-GNL-HLKFLALEGNPLRTI-RREIISKGTQEVLKYLRSKIKDDGLSQSEG 342 (565)
T ss_pred CchHHHHhhhhhhhcccCCccc-cCCccc-ccc-eeeehhhcCCchHHH-HHHHHcccHHHHHHHHHHhhccCCCCCCcc
Confidence 7777777777777777777777 555554 344 666777777766522 22111111 111110 11100
Q ss_pred ---ccccCCc----cccCccccceEEecCCccccCCCCCCCCCCC---CCEEECCCCccccCCChhHHhhcccccCcccc
Q 000889 583 ---LTGEIPA----GIGNLVKLAILQLGNNSLTGQVPQGLGKCRS---LVWLDLNSNNLSGPLPSELANQAGVVMPGIVS 652 (1237)
Q Consensus 583 ---l~~~~p~----~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~---L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~ 652 (1237)
=++..|. ....+...+.|+++.=+++ .+|.....-.. .+..+++.|++. ++|..+..+..++..-..+
T Consensus 343 ~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~ls 420 (565)
T KOG0472|consen 343 GTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLS 420 (565)
T ss_pred cccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhh
Confidence 0001111 2334566778888888888 66665443333 677888888887 7888777665543322222
Q ss_pred CccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCcceeccceeeeeccCCceeEEEccCCcCCccCCcccc
Q 000889 653 GKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGMTMYTFTTNGSLIYLDLSYNSLSGTLPENFG 732 (1237)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~ 732 (1237)
.+...|+ ....+..++|..|+|++|-+. .+|.+++
T Consensus 421 nn~isfv--------------------------------------------~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~ 455 (565)
T KOG0472|consen 421 NNKISFV--------------------------------------------PLELSQLQKLTFLDLSNNLLN-DLPEEMG 455 (565)
T ss_pred cCccccc--------------------------------------------hHHHHhhhcceeeecccchhh-hcchhhh
Confidence 2222111 112234458999999999998 8999999
Q ss_pred CCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCCCcccCcccccceecccccccccCCCCCCCCccCCCc
Q 000889 733 SLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIPGSLGGLSFLSDLDVSNNNLSGIIPSGGQLTTFPASR 812 (1237)
Q Consensus 733 ~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~ 812 (1237)
.+..|+.||+|+|+|. .+|..+-.+.-|+.+-.++|++....|..+.+|.+|..|||.+|.+..+||..|.++++....
T Consensus 456 ~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLe 534 (565)
T KOG0472|consen 456 SLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLE 534 (565)
T ss_pred hhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEE
Confidence 9999999999999999 999999999889988889999986556669999999999999999999999999999999998
Q ss_pred ccCCC
Q 000889 813 YENNS 817 (1237)
Q Consensus 813 ~~~n~ 817 (1237)
+.||+
T Consensus 535 L~gNp 539 (565)
T KOG0472|consen 535 LDGNP 539 (565)
T ss_pred ecCCc
Confidence 88886
No 47
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=329.50 Aligned_cols=267 Identities=29% Similarity=0.394 Sum_probs=201.5
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCe-----EEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEE-----RLLV 1002 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~~lv 1002 (1237)
.|+..+++|.|+||.||+|... +++.||||++...... -.+|+++|++++|||||++..+|....+ ..+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4666789999999999999876 4689999998654332 2379999999999999999998865332 3589
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC-CceEEeeccccee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN-FEARVSDFGMARL 1081 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~-~~vkl~DfGla~~ 1081 (1237)
||||+ .+|.++++..... +..++...++-+.+|+.+|++|||+. +|+||||||+|+|+|.+ |.+||||||.|+.
T Consensus 101 leymP-~tL~~~~r~~~~~-~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 101 LEYMP-ETLYRVIRHYTRA-NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHhch-HHHHHHHHHHhhc-CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 99998 7999999864332 35778888899999999999999998 99999999999999965 9999999999998
Q ss_pred eccCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--ccc
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--KRI 1158 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 1158 (1237)
....... .....|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+... .+.+....+..... +.+
T Consensus 176 L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~--~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 176 LVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS--VDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred eccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH--HHHHHHHHHHhCCCCHHHH
Confidence 8765554 235678899999998865 699999999999999999999999987432 23333333322111 111
Q ss_pred cc-------ccCccccCCC----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhccc
Q 000889 1159 NE-------ILDPELTMQT----SDETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQV 1209 (1237)
Q Consensus 1159 ~~-------~~~~~l~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~ 1209 (1237)
.. ...+.+.... .......+.++++.+++..+|.+|.++.+++++ +.++..
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 11 1111111111 111223456778889999999999999999977 444443
No 48
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=305.57 Aligned_cols=265 Identities=22% Similarity=0.317 Sum_probs=211.3
Q ss_pred hCCCCCCceecccCCeEEEEEEE-CCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeC-----CeEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQL-RDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIG-----EERL 1000 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 1000 (1237)
..+|++.+.+|+|||+.||+++. .++..+|+|++.....++.+..++|++..++++||||++++++...+ .+.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 45799999999999999999984 46889999999876667778889999999999999999999987443 3589
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccce
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1080 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~ 1080 (1237)
++++|...|+|.+.++.... ++..+++.+..+|+.++++||++||+.. ++++||||||.||++++.+.+++.|||.+.
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~-kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKI-KGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEeehhccccHHHHHHHHhh-cCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999999987644 3568999999999999999999999982 359999999999999999999999999987
Q ss_pred eeccCCcce-------eeeccccCCCcCCccccC---ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHH
Q 000889 1081 LVNALDTHL-------SVSTLAGTPGYVPPEYYQ---SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAK 1150 (1237)
Q Consensus 1081 ~~~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1150 (1237)
...-.-... .-.....|..|+|||.+. +...+.++|||||||++|+|+.|..||+....
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----------- 246 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----------- 246 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-----------
Confidence 543211100 012244688999999985 44568899999999999999999999974321
Q ss_pred HHhhhcccc-cccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1151 QLHREKRIN-EILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1151 ~~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
+.+.+. .+..+.+..+... ...+.+.+++..|+++||.+||++.+++..++.+.
T Consensus 247 ---~GgSlaLAv~n~q~s~P~~~-~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 ---QGGSLALAVQNAQISIPNSS-RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ---cCCeEEEeeeccccccCCCC-CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 222222 2223333322222 24557788899999999999999999999988753
No 49
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=324.02 Aligned_cols=280 Identities=24% Similarity=0.346 Sum_probs=209.5
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecc--ccCcCHHHHHHHHHHHHhcCCCCcccccceEEe-----CC
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIH--VTGQGDREFMAEMETIGKIKHRNLVPLLGYCKI-----GE 997 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~ 997 (1237)
....|...+.||+|+||.|+.|.++ +|+.||+||+.. ......++..+|+++++.++|+||+.+++.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3445666788999999999999887 689999999973 333445678899999999999999999998855 35
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
..|+|+|+|+ .+|...++.. +.++...+..+++|+++|+.|+|+. +|+|||+||+|++++.+..+||+|||
T Consensus 100 DvYiV~elMe-tDL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccc
Confidence 7899999994 7899998763 4589999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccC-ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHH--------
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQ-SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGW-------- 1148 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~-------- 1148 (1237)
+|+...........+..+.|..|.|||++. ...|+.++||||.|||+.||++|++-|.+........+...
T Consensus 171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 999876543333446677899999999875 46799999999999999999999999987543221111000
Q ss_pred -HHHHh----hh--cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhcccccCCCCC
Q 000889 1149 -AKQLH----RE--KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQVDTEGDSL 1216 (1237)
Q Consensus 1149 -~~~~~----~~--~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~~~~~~~~ 1216 (1237)
..... +. ......-...+.. -.+......++++.+|+..||.+|+|++|++++ |.......+.+..
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~--~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~ 325 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSS--IFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVC 325 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHH--HcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCC
Confidence 00000 00 0000000000000 001112345677789999999999999999998 5666555544433
No 50
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5e-36 Score=339.12 Aligned_cols=247 Identities=19% Similarity=0.293 Sum_probs=197.5
Q ss_pred ceecccCCeEEEEEEECCCCEEEEEEeccccCcC---HHHHHHHHHHHHhcCCCCcccccceEEe----CCeEEEEEEec
Q 000889 934 SMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQG---DREFMAEMETIGKIKHRNLVPLLGYCKI----GEERLLVYEYM 1006 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 1006 (1237)
..||+|++|.||+|.+ +|+.||||++....... .+.+.+|++++++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999998 48899999987543333 3567899999999999999999999876 34679999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++|+|.+++... ..+++....+++.+++.|++|||+.. +++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 105 TRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred CCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 999999999753 46889999999999999999999842 78899999999999999999999999998654321
Q ss_pred cceeeeccccCCCcCCccccCc--cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQS--FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ........... .
T Consensus 178 -----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~------~~~~~~i~~~~-------~ 239 (283)
T PHA02988 178 -----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT------KEIYDLIINKN-------N 239 (283)
T ss_pred -----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcC-------C
Confidence 23467899999999976 6789999999999999999999999975321 11111111110 0
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
+...+.. ....+.+++.+||+.||++|||+.++++.|+.++.
T Consensus 240 ~~~~~~~---~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 240 SLKLPLD---CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred CCCCCCc---CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 1111111 22356788889999999999999999999988753
No 51
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1e-35 Score=337.48 Aligned_cols=252 Identities=25% Similarity=0.316 Sum_probs=199.3
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
.|+..+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++|++|+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3677889999999999999875 68899999886432 1223457889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~g~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 81 IMNGGDLKFHIYNMG---NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred ecCCCcHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 999999998886432 23688999999999999999999999 999999999999999999999999999986543
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
.. ......|++.|||||++.+..++.++||||+||++|||++|+.||........ ....... .. ..
T Consensus 155 ~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~--~~~~~~~-~~--------~~ 220 (285)
T cd05631 155 GE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK--REEVDRR-VK--------ED 220 (285)
T ss_pred CC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh--HHHHHHH-hh--------cc
Confidence 22 12345789999999999999999999999999999999999999975432110 0111110 00 00
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPT-----MIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~~ 1203 (1237)
...... .....+.+++.+||+.+|++||+ +++++++
T Consensus 221 ~~~~~~---~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 221 QEEYSE---KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred cccCCc---cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 000111 11235667888999999999997 7888875
No 52
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=311.14 Aligned_cols=253 Identities=24% Similarity=0.313 Sum_probs=199.7
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEec--cccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLI--HVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.+.|++.+.||+|.|+.||+.... +|+.+|+|.+. +....+.+++.+|+++.+.++|||||++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 346777889999999999998765 57888888664 223446678899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC---CCCceEEeecccce
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD---ENFEARVSDFGMAR 1080 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~---~~~~vkl~DfGla~ 1080 (1237)
|+|.|++|..-+-.+ ...++..+-..+.||++|+.|+|.+ +|||||+||+|+++. ...-+|++|||+|.
T Consensus 90 e~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred ecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEE
Confidence 999999998766554 3578888899999999999999999 999999999999995 34569999999999
Q ss_pred eeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1081 LVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1081 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
.+.... ....++|||+|||||+++..+|+.++|||+.||++|-++.|++||.+... ..+ +......
T Consensus 162 ~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~---~rl--ye~I~~g------ 227 (355)
T KOG0033|consen 162 EVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRL--YEQIKAG------ 227 (355)
T ss_pred EeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH---HHH--HHHHhcc------
Confidence 887222 23567899999999999999999999999999999999999999975321 111 1111111
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.+|-..+.-....+ ...+++.+|+..||.+|.|+.|++++=
T Consensus 228 ~yd~~~~~w~~is~---~Ak~LvrrML~~dP~kRIta~EAL~Hp 268 (355)
T KOG0033|consen 228 AYDYPSPEWDTVTP---EAKSLIRRMLTVNPKKRITADEALKHP 268 (355)
T ss_pred ccCCCCcccCcCCH---HHHHHHHHHhccChhhhccHHHHhCCc
Confidence 11111111111122 334677799999999999999998763
No 53
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=356.98 Aligned_cols=260 Identities=26% Similarity=0.342 Sum_probs=214.0
Q ss_pred hCCCCCCceecccCCeEEEEEEECCC-CEEEEEEeccccCcCHHHHHHHHHHHHhcC-CCCcccccce-EEe------CC
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRDG-SVVAIKKLIHVTGQGDREFMAEMETIGKIK-HRNLVPLLGY-CKI------GE 997 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~~ 997 (1237)
..++++.++|.+|||+.||.|++..+ ..||+|++........+.+.+|+++|++|+ |||||.+++. ... .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 45678889999999999999998876 999999998766666778899999999997 9999999993 221 23
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
++++.||||.||.|-+++..+.. ..+++.++++|+.|+++|+++||.. .++|||||||-+|||++.+++.||||||
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 67899999999999999998765 3599999999999999999999997 5679999999999999999999999999
Q ss_pred cceeeccCC-cceee------eccccCCCcCCcccc---CccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHH
Q 000889 1078 MARLVNALD-THLSV------STLAGTPGYVPPEYY---QSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVG 1147 (1237)
Q Consensus 1078 la~~~~~~~-~~~~~------~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~ 1147 (1237)
.|...-... ..... -...-|+.|+|||++ .+...+.|+|||+|||++|-++....||+...
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--------- 262 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--------- 262 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc---------
Confidence 996432211 11000 123468999999987 46778999999999999999999999997431
Q ss_pred HHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccc
Q 000889 1148 WAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVD 1210 (1237)
Q Consensus 1148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~ 1210 (1237)
-..|++..+..+.. +.....+.+||..|++++|++||++.+|+..+.++...
T Consensus 263 ----------~laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 263 ----------KLAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ----------ceeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 12345555544443 44667888999999999999999999999999888663
No 54
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.1e-35 Score=349.78 Aligned_cols=261 Identities=26% Similarity=0.435 Sum_probs=202.9
Q ss_pred hCCCCCCceecccCCeEEEEEEEC------CCCEEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCe
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEE 998 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 998 (1237)
.++|++.+.||+|+||.||+|++. .+..||||++.... ....+.+.+|+++++.+ +||||+++++++..++.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 346888899999999999999742 35689999886432 22345688999999999 89999999999999999
Q ss_pred EEEEEEeccCCCHHHHHhhhhc----------------------------------------------------------
Q 000889 999 RLLVYEYMKWGSLESVLHDRAK---------------------------------------------------------- 1020 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 1020 (1237)
.++||||+++|+|.++++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999999975321
Q ss_pred ------------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1021 ------------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1021 ------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
.....+++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 0123578889999999999999999999 9999999999999999999999999999866543322
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
.......++..|+|||++.+..++.++|||||||++|||++ |..||...... .....+ ...... ..
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--~~~~~~---~~~~~~------~~-- 337 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--SKFYKM---IKEGYR------ML-- 337 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--HHHHHH---HHhCcc------CC--
Confidence 22223345678999999999899999999999999999998 88888643211 111111 111100 00
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
.+.. ...++.+++.+||+.+|++||++.++++.|++
T Consensus 338 ~~~~---~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 338 SPEC---APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCC---CCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 0011 12357788899999999999999999999986
No 55
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-36 Score=339.71 Aligned_cols=251 Identities=23% Similarity=0.409 Sum_probs=209.5
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCe-EEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEE-RLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 1003 (1237)
++|...+.+|+|+||.++.++++ ++..+++|++.-... ...+....|+.++++++|||||.+++.|..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46888899999999999999877 577899998874332 223457889999999999999999999998888 89999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
+||+||++.+.+.+.. +..+++....+|+.|++.|+.|||++ .|+|||||+.||+++.++.|||+|||+|+...
T Consensus 84 ~Y~eGg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred eecCCCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 9999999999998765 46789999999999999999999998 99999999999999999999999999999887
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.... ...+..||+.||.||.+.+..|..|+||||+||++|||++-+++|..... ...+....+ ....
T Consensus 158 ~~~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m------~~Li~ki~~-----~~~~ 224 (426)
T KOG0589|consen 158 PEDS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM------SELILKINR-----GLYS 224 (426)
T ss_pred Cchh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch------HHHHHHHhh-----ccCC
Confidence 6542 24578899999999999999999999999999999999999999986432 111111111 1111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+ + ...+..++..++..|++.+|+.||++.+++.+
T Consensus 225 P-l-----p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 P-L-----PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred C-C-----CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1 1 12234567788889999999999999999987
No 56
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.9e-36 Score=313.23 Aligned_cols=259 Identities=25% Similarity=0.278 Sum_probs=199.4
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcC--HHHHHHHHHHHHhcCCCCcccccceEEe--CCeEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQG--DREFMAEMETIGKIKHRNLVPLLGYCKI--GEERLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 1003 (1237)
.|+....|++|+||.||+|+++ +++.||+|+++...... .---.+|+.++.+++|||||.+..+... -+..||||
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 4777889999999999999987 57899999997543221 1235789999999999999999987754 35789999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
|||+ -+|..+++... +++...+++.+..|+++|++|||.+ .|+|||+|++|+|+...|.+||+|||+|+.++
T Consensus 157 e~~E-hDLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 157 EYVE-HDLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHH-hhHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9998 68999998653 5889999999999999999999999 99999999999999999999999999999887
Q ss_pred cCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh-cc-ccc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE-KR-INE 1160 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 1160 (1237)
.. ....+..+-|..|+|||.+.+. .|++++|+||+|||+.||+++++-|.+... .+.+......+... +. ...
T Consensus 229 sp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE--~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 229 SP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE--IDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred CC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch--HHHHHHHHHHhCCCccccCCC
Confidence 54 2334567789999999998765 599999999999999999999999986532 12222211111100 00 000
Q ss_pred c------------------cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1161 I------------------LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1161 ~------------------~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+ +.+.+.... -...-.+++..++..||.+|.|+.+.+++
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~----lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALS----LSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccc----cchhHHHHHHHHhccCccccccHHHhhcc
Confidence 0 001111000 11233466778999999999999999987
No 57
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.3e-35 Score=348.69 Aligned_cols=262 Identities=26% Similarity=0.408 Sum_probs=202.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccCc-CHHHHHHHHHHHHhc-CCCCcccccceEEeCCeE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTGQ-GDREFMAEMETIGKI-KHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 999 (1237)
++|++.+.||+|+||.||+|++. ++..||+|++...... ....+.+|+++++.+ +||||+++++++...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 36888999999999999999853 2357999988643322 234678899999999 899999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhc-----------------------------------------------------------
Q 000889 1000 LLVYEYMKWGSLESVLHDRAK----------------------------------------------------------- 1020 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 1020 (1237)
++||||+++|+|.++++....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 999999999999999865321
Q ss_pred ------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeeecc
Q 000889 1021 ------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTL 1094 (1237)
Q Consensus 1021 ------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~ 1094 (1237)
.....+++..+.+++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++..............
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 0113478888999999999999999999 9999999999999999999999999999865433222222233
Q ss_pred ccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCH
Q 000889 1095 AGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDE 1173 (1237)
Q Consensus 1095 ~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1173 (1237)
.++..|||||++.+..++.++|||||||++|||++ |+.||...... ..... ... .. .... .+...
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~--~~~~~---~~~-~~-----~~~~--~~~~~- 340 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN--SKFYK---MVK-RG-----YQMS--RPDFA- 340 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc--HHHHH---HHH-cc-----cCcc--CCCCC-
Confidence 45678999999998899999999999999999997 99998743211 11111 111 00 0000 01111
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1174 TELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1174 ~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
..++.+++.+||+.+|++|||+.++++.|+++.
T Consensus 341 --~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 341 --PPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred --CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 235678888999999999999999999998863
No 58
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.1e-35 Score=338.35 Aligned_cols=245 Identities=22% Similarity=0.275 Sum_probs=199.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999987 58899999885422 123456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 81 EYVPGGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 999999999998753 4688899999999999999999999 99999999999999999999999999997654
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.. .....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ..........
T Consensus 153 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~------~~~~~~i~~~-------- 213 (291)
T cd05612 153 DR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP------FGIYEKILAG-------- 213 (291)
T ss_pred CC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhC--------
Confidence 21 1235689999999999998899999999999999999999999974321 1111111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPT-----MIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~~ 1203 (1237)
....+... ...+.+++.+|++.||.+||+ +.+++++
T Consensus 214 -~~~~~~~~---~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 214 -KLEFPRHL---DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred -CcCCCccC---CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 11111111 124567888999999999995 8888876
No 59
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-36 Score=331.86 Aligned_cols=253 Identities=25% Similarity=0.430 Sum_probs=209.1
Q ss_pred CCCCceecccCCeEEEEEEECC---CC--EEEEEEecc-ccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 930 FSADSMIGSGGFGEVYKAQLRD---GS--VVAIKKLIH-VTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~---~~--~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.+..++||+|-||.||+|.+.+ |+ .||||..+. ....+.+.|..|..+|+.++||||++++|.|. ....|+||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQPMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-ccceeEEE
Confidence 4556789999999999998653 33 588898875 44556778999999999999999999999996 56889999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
|.++.|.|..|++.+. ..++......++.||..||+|||+. .+|||||..+|||+.....||++|||+++.++
T Consensus 470 EL~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred ecccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 9999999999998764 4688889999999999999999999 99999999999999999999999999999887
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.... ++.+...-+..|||||.+.-.+++.++|||-|||+|||++. |..||.+-...+ .+..+-
T Consensus 543 d~~y-YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD---------------VI~~iE 606 (974)
T KOG4257|consen 543 DDAY-YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD---------------VIGHIE 606 (974)
T ss_pred ccch-hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc---------------eEEEec
Confidence 6443 33345556779999999999999999999999999999886 999998643221 111111
Q ss_pred -CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1163 -DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1163 -~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
..+++.+..+++. +..++.+||+++|.+||++.++...|.++..
T Consensus 607 nGeRlP~P~nCPp~---LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 607 NGERLPCPPNCPPA---LYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCCCCChH---HHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 2344555555554 4467789999999999999999999987654
No 60
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=343.79 Aligned_cols=245 Identities=24% Similarity=0.314 Sum_probs=199.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||.||+|+++ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46888899999999999999987 57899999886432 223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 98 EFVVGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred cCCCCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 999999999998753 3678888999999999999999999 99999999999999999999999999998664
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
... ....|++.|+|||++.+..++.++|||||||++|||++|+.||.... ....+ .... .
T Consensus 170 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~-~~i~-~-------- 229 (329)
T PTZ00263 170 DRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-----PFRIY-EKIL-A-------- 229 (329)
T ss_pred CCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC-----HHHHH-HHHh-c--------
Confidence 321 23578999999999999899999999999999999999999996432 11111 1111 1
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPT-----MIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~~ 1203 (1237)
.....+.... ..+.+++.+|++.||.+||+ +.+++++
T Consensus 230 ~~~~~p~~~~---~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 230 GRLKFPNWFD---GRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCcCCCCCCC---HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1111111111 24567888999999999997 6888766
No 61
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-36 Score=342.30 Aligned_cols=259 Identities=25% Similarity=0.414 Sum_probs=213.7
Q ss_pred CCCceecccCCeEEEEEEEC-C----CCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 931 SADSMIGSGGFGEVYKAQLR-D----GSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 931 ~~~~~lG~G~fg~Vy~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
+..++||+|+||+||+|.+- + ..+||+|++.... .+...++.+|+-+|.+++|||+++++++|.... ..+|++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 34678999999999999874 3 3468899886543 344678999999999999999999999998665 889999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+++|+|.+|++..+ ..+.....+.|..|||+||.|||.+ ++|||||..+|||+.+-.++||.|||+|+....
T Consensus 778 ~mP~G~LlDyvr~hr----~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHR----DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred hcccchHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 999999999998753 4788888999999999999999999 999999999999999999999999999998888
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
++.........-.+.|||-|.+....|+.++|||||||++||++| |..|+++....+..++ +...+
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl------le~ge------- 917 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL------LEKGE------- 917 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH------Hhccc-------
Confidence 777766666667889999999999999999999999999999999 9999986553322111 11111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCC
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGD 1214 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~ 1214 (1237)
++.. .+-+..++..++.+||..|+..||+++++...+.++..++...
T Consensus 918 -RLsq---PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqry 964 (1177)
T KOG1025|consen 918 -RLSQ---PPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRY 964 (1177)
T ss_pred -cCCC---CCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceE
Confidence 1222 2224456667888999999999999999999999887766443
No 62
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=336.94 Aligned_cols=245 Identities=29% Similarity=0.416 Sum_probs=199.8
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
|+-.+.||.|+||.||.|++. +.++||||++.....+ ..+++..|++++++++|||++.+.|+|-.....|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 444567999999999999876 6789999999744333 346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
|- |+-.|++.-.. +++.+..+..|..+.+.||+|||+. +.||||||+.|||+++.|.||++|||.|....+
T Consensus 108 Cl-GSAsDlleVhk----KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P- 178 (948)
T KOG0577|consen 108 CL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP- 178 (948)
T ss_pred Hh-ccHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc-
Confidence 96 78888876543 4788999999999999999999999 999999999999999999999999999977654
Q ss_pred CcceeeeccccCCCcCCccccC---ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQ---SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
...++|||.|||||++. .+.|+-++||||+|++..|+...++|+.... .+..... +...-
T Consensus 179 -----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-----AMSALYH-------IAQNe 241 (948)
T KOG0577|consen 179 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYH-------IAQNE 241 (948)
T ss_pred -----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch-----HHHHHHH-------HHhcC
Confidence 35689999999999984 5689999999999999999999999965321 1111111 11111
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.|.+. ..+....|..++..|+++-|.+|||..+++++-
T Consensus 242 sPtLq----s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 242 SPTLQ----SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred CCCCC----CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 22222 234455677777799999999999999998874
No 63
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.6e-35 Score=341.96 Aligned_cols=242 Identities=20% Similarity=0.301 Sum_probs=194.6
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999876 68899999886432 122345778999999999999999999999999999999999999
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcce
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHL 1089 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~ 1089 (1237)
+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~ 150 (323)
T cd05571 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--A 150 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--C
Confidence 999998753 4688999999999999999999999 99999999999999999999999999997532221 1
Q ss_pred eeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCC
Q 000889 1090 SVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQ 1169 (1237)
Q Consensus 1090 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1169 (1237)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... +..++
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~~~~~-------~~~~p-- 215 (323)
T cd05571 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILME-------EIRFP-- 215 (323)
T ss_pred cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH------HHHHHHHHcC-------CCCCC--
Confidence 22346799999999999998999999999999999999999999964321 1111111110 01111
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1170 TSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1170 ~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
... ..++.+++.+|++.||++|| ++.+++++
T Consensus 216 ~~~---~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 216 RTL---SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCC---CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 111 23466788899999999999 89999875
No 64
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.1e-35 Score=342.76 Aligned_cols=253 Identities=22% Similarity=0.325 Sum_probs=202.1
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999987 47899999986432 123456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 81 EYVPGGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 999999999999653 4678899999999999999999999 99999999999999999999999999997654
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... ......... ...
T Consensus 153 ~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~---~~~---~~i~~~~~~--~~~ 219 (333)
T cd05600 153 T-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN---ETW---ENLKYWKET--LQR 219 (333)
T ss_pred c-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH---HHH---HHHHhcccc--ccC
Confidence 3 223467999999999999989999999999999999999999999753311 111 111100000 000
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+... ........++.+++.+|+..+|.+||++.+++++
T Consensus 220 ~~~~--~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 220 PVYD--DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCC--ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1000 0001122356678889999999999999999987
No 65
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.9e-35 Score=335.93 Aligned_cols=265 Identities=22% Similarity=0.273 Sum_probs=199.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
++|++.+.||+|+||+||+|+++ +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999987 57889999886432 2234567889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|++++.+..+... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 81 YVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9998776654432 24688899999999999999999999 999999999999999999999999999986643
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHH-----------HHh
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAK-----------QLH 1153 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~-----------~~~ 1153 (1237)
... .......|++.|+|||++.+..++.++||||+||++|||++|+.||...... ........ ...
T Consensus 153 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 153 GSN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI--DQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred ccc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhhCCCCHHHHHhhh
Confidence 221 1223456899999999999888999999999999999999999999753211 11111000 000
Q ss_pred hhcccccccCccccCCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1154 REKRINEILDPELTMQTSD-----ETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 ~~~~~~~~~~~~l~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..........+........ ......+.+++.+|++.+|++|||+.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000000000000 0112457889999999999999999999864
No 66
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-35 Score=342.35 Aligned_cols=284 Identities=23% Similarity=0.354 Sum_probs=211.5
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
.++|++.+.||+|+||.||+|++. ++..+|+|.+.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 357899999999999999999987 57788888776432 1224568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+++|+|.+++... ..+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 84 HMDGGSLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999998753 35889999999999999999999862 699999999999999999999999999976532
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--c------
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--K------ 1156 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~------ 1156 (1237)
.. .....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ..+.......... .
T Consensus 157 ~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 229 (331)
T cd06649 157 SM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA---KELEAIFGRPVVDGEEGEPHSI 229 (331)
T ss_pred cc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHhcccccccccCCcccc
Confidence 21 2345689999999999998999999999999999999999999964321 1111100000000 0
Q ss_pred --------------------------ccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccc
Q 000889 1157 --------------------------RINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVD 1210 (1237)
Q Consensus 1157 --------------------------~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~ 1210 (1237)
....+.....+ .........++.+++.+||+.+|++|||+.+++++----.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~-- 306 (331)
T cd06649 230 SPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPP-KLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKR-- 306 (331)
T ss_pred CcccccccccccccccccccchhHHHHHHHHHhCCCc-CCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhh--
Confidence 00000000000 0000112346778999999999999999999998743211
Q ss_pred cCCCCCCccCchhhHHHHHH
Q 000889 1211 TEGDSLDSFSLKDTVIEELR 1230 (1237)
Q Consensus 1211 ~~~~~~~~~~~~~~~~~~~~ 1230 (1237)
....+..++.-..++++
T Consensus 307 ---~~~~~~~~~~~~~~~~~ 323 (331)
T cd06649 307 ---SEVEEVDFAGWLCKTLR 323 (331)
T ss_pred ---cccccccHHHHHHHhhc
Confidence 22334555555555555
No 67
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.9e-35 Score=335.88 Aligned_cols=264 Identities=23% Similarity=0.316 Sum_probs=197.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.++||+|+||+||+|+.+ ++..||+|++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888999999999999999886 57899999886432 22345678999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
++ |+|.+++... +..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 85 LD-SDLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred CC-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 98 5899888653 23578899999999999999999999 9999999999999999999999999999765432
Q ss_pred CcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh--hcc-----
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR--EKR----- 1157 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~----- 1157 (1237)
.. ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+......... ...
T Consensus 157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 157 TK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE--ELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred Cc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhccc
Confidence 21 1234567899999999865 568999999999999999999999997543211 11110000000 000
Q ss_pred ----cccccCccccCCC---CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1158 ----INEILDPELTMQT---SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1158 ----~~~~~~~~l~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
......+...... ..+....+..+++.+|++.||.+|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000000000 000012346688889999999999999999864
No 68
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=356.77 Aligned_cols=254 Identities=22% Similarity=0.283 Sum_probs=201.3
Q ss_pred CCCCCceecccCCeEEEEEEECC--CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD--GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.|.+.+.||+|+||.||+|.... +..||+|++..........+.+|+++++.++||||+++++++..++..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 38888999999999999998653 5678888765433333445778999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++|+|.+++..... ...++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 148 ~gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 148 SGGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 99999999875432 234688999999999999999999999 99999999999999999999999999998765433
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... . .+ ..
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~------~~~~~~~~~~-~----~~-~~ 291 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ------REIMQQVLYG-K----YD-PF 291 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhC-C----CC-CC
Confidence 22223456799999999999998999999999999999999999999964321 1111111111 0 00 01
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+.. ....+.+++.+|++.+|++||++.+++++
T Consensus 292 --~~~---~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 292 --PCP---VSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred --Ccc---CCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 111 12356788889999999999999999764
No 69
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.9e-35 Score=333.81 Aligned_cols=259 Identities=27% Similarity=0.472 Sum_probs=204.7
Q ss_pred CCCCCceecccCCeEEEEEEECCC------CEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRDG------SVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~~------~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
+|++.+.||+|+||.||+|..... ..||+|.+..... .....+.+|++++++++||||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 578889999999999999987532 4689998764322 223568899999999999999999999998899999
Q ss_pred EEEeccCCCHHHHHhhhhcCCC-----------CccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCc
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGG-----------TKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFE 1070 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~-----------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~ 1070 (1237)
+|||+++|+|.+++........ ..+++..+..++.|++.|++|||+. +++||||||+||++++++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCCc
Confidence 9999999999999976432211 4678899999999999999999999 9999999999999999999
Q ss_pred eEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHH
Q 000889 1071 ARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWA 1149 (1237)
Q Consensus 1071 vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 1149 (1237)
+||+|||+++.....+.........+++.|+|||++.+..++.++|||||||++|||++ |..||..... ... .
T Consensus 163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~---~~~---~ 236 (283)
T cd05048 163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN---QEV---I 236 (283)
T ss_pred EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH---HHH---H
Confidence 99999999986544333223334556889999999988889999999999999999998 9999875321 111 1
Q ss_pred HHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1150 KQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
.... ..... ..+ .....++.+++.+||+.+|.+||++.+++++|+.+
T Consensus 237 ~~i~-~~~~~-------~~~---~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 237 EMIR-SRQLL-------PCP---EDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHH-cCCcC-------CCc---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1111 11110 011 11234677888899999999999999999999763
No 70
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=341.62 Aligned_cols=245 Identities=24% Similarity=0.320 Sum_probs=198.3
Q ss_pred CCCCCCceecccCCeEEEEEEECC--CCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD--GSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
++|++.+.||+|+||.||+|+++. +..||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 368889999999999999998653 3589999886432 22345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 ~Ey~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 9999999999999753 4688999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
... .....||+.|||||++.+..++.++||||+||++|||++|+.||.... ....+.. ... .
T Consensus 182 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~-i~~-~------ 243 (340)
T PTZ00426 182 DTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE-----PLLIYQK-ILE-G------ 243 (340)
T ss_pred CCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC-----HHHHHHH-Hhc-C------
Confidence 432 134579999999999998889999999999999999999999997432 1111111 111 1
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
....+.... ..+.+++.+|++.+|++|+ ++.+++++
T Consensus 244 --~~~~p~~~~---~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 244 --IIYFPKFLD---NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred --CCCCCCCCC---HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 010111111 2356788899999999995 89998876
No 71
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=4.9e-35 Score=344.83 Aligned_cols=264 Identities=25% Similarity=0.422 Sum_probs=205.6
Q ss_pred hCCCCCCceecccCCeEEEEEEECC------CCEEEEEEeccccC-cCHHHHHHHHHHHHhcC-CCCcccccceEEeCCe
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD------GSVVAIKKLIHVTG-QGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEE 998 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 998 (1237)
.++|++.++||+|+||.||+|++.. +..||||++..... ...+.+.+|+++++++. ||||+++++++.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 4578889999999999999998642 34699998864332 22456889999999996 9999999999999999
Q ss_pred EEEEEEeccCCCHHHHHhhhhcC---------------------------------------------------------
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKG--------------------------------------------------------- 1021 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------------- 1021 (1237)
.++||||+++|+|.+++......
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 99999999999999998754210
Q ss_pred ----------------------------------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC
Q 000889 1022 ----------------------------------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE 1067 (1237)
Q Consensus 1022 ----------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~ 1067 (1237)
....+++..+.+++.|+++|++|||+. +|+||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 113477888899999999999999999 9999999999999999
Q ss_pred CCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHH
Q 000889 1068 NFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLV 1146 (1237)
Q Consensus 1068 ~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~ 1146 (1237)
++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...... ....
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~--~~~~ 350 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD--STFY 350 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh--HHHH
Confidence 99999999999986644333222234456788999999998889999999999999999997 99998643211 1111
Q ss_pred HHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1147 GWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
....... . .... ......+.+++.+||+.+|++|||+.++.++|+++..
T Consensus 351 ---~~~~~~~------~--~~~~---~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 351 ---NKIKSGY------R--MAKP---DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---HHHhcCC------C--CCCC---ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1111110 0 0011 1123457788899999999999999999999998643
No 72
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.8e-35 Score=331.45 Aligned_cols=264 Identities=26% Similarity=0.455 Sum_probs=208.2
Q ss_pred hCCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 1000 (1237)
.++|.+.+.||+|+||.||++... ++..+|+|.+........+.+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 356888999999999999999852 24568888876544444567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhhc--------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceE
Q 000889 1001 LVYEYMKWGSLESVLHDRAK--------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEAR 1072 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vk 1072 (1237)
+||||+++++|.+++..... .....+++..+..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 99999999999999975421 1123589999999999999999999999 999999999999999999999
Q ss_pred EeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHH
Q 000889 1073 VSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQ 1151 (1237)
Q Consensus 1073 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 1151 (1237)
|+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... .. ....
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---~~---~~~~ 234 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NE---VIEC 234 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HH---HHHH
Confidence 999999986543332222233445778999999998889999999999999999998 8999864321 11 1111
Q ss_pred HhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccc
Q 000889 1152 LHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVD 1210 (1237)
Q Consensus 1152 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~ 1210 (1237)
.. ..... .. ... ....+.+++.+||+.+|.+|||+.++.+.|+.+...
T Consensus 235 i~-~~~~~-----~~--~~~---~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 IT-QGRVL-----QR--PRT---CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HH-cCCcC-----CC--CCC---CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 11 11100 00 111 123577889999999999999999999999998764
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6e-35 Score=337.00 Aligned_cols=242 Identities=21% Similarity=0.301 Sum_probs=193.7
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
+.||+|+||.||+|+.. ++..||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999976 58899999986432 223345778999999999999999999999999999999999999
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcce
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHL 1089 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~ 1089 (1237)
+|..++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~ 150 (323)
T cd05595 81 ELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--A 150 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--C
Confidence 999888653 4688999999999999999999999 99999999999999999999999999987532211 1
Q ss_pred eeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCC
Q 000889 1090 SVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQ 1169 (1237)
Q Consensus 1090 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1169 (1237)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... . ......... +..++
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---~---~~~~~~~~~-------~~~~p-- 215 (323)
T cd05595 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---E---RLFELILME-------EIRFP-- 215 (323)
T ss_pred ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---H---HHHHHHhcC-------CCCCC--
Confidence 22346799999999999998999999999999999999999999964321 0 111111100 00111
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1170 TSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1170 ~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
... ...+.+++.+|++++|++|| ++.+++++
T Consensus 216 ~~~---~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 216 RTL---SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCC---CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 111 23456788899999999998 88888875
No 74
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.9e-35 Score=316.07 Aligned_cols=270 Identities=24% Similarity=0.310 Sum_probs=202.8
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCC-cccccceEEeCC------e
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRN-LVPLLGYCKIGE------E 998 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------~ 998 (1237)
.|+..++||+|+||+||+|+.+ +|+.||+|++.-...+ ......+|+.++++++|+| |+++++++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 3555667999999999999876 6889999999754332 3345689999999999999 999999998877 7
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1078 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGl 1078 (1237)
.++||||++ -+|..++....... ..++...++.++.|++.|++|||++ +|+||||||+||+++++|.+||+|||+
T Consensus 92 l~lvfe~~d-~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 92 LYLVFEFLD-RDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred EEEEEEeec-ccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 899999997 79999998765321 3466688899999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--
Q 000889 1079 ARLVNALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE-- 1155 (1237)
Q Consensus 1079 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-- 1155 (1237)
|+...-... ..+..++|..|+|||++.+. .|+..+||||+||+++||++++.-|.+... .+.+....+.....
T Consensus 167 Ara~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se--~~ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 167 ARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE--IDQLFRIFRLLGTPNE 242 (323)
T ss_pred HHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHHcCCCCc
Confidence 986542221 24567789999999999876 699999999999999999999999876532 11111111111111
Q ss_pred cccccc---cCccccCCCCC-----HH----HHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhc
Q 000889 1156 KRINEI---LDPELTMQTSD-----ET----ELYQYLRISFECLDDRPFKRPTMIQVMAM--FKEL 1207 (1237)
Q Consensus 1156 ~~~~~~---~~~~l~~~~~~-----~~----~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l 1207 (1237)
...+.. .+......... .. -.....+++.+|++.+|.+|.|+..++++ +.++
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 111110 01110000000 00 01256678889999999999999999987 5544
No 75
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.5e-35 Score=328.06 Aligned_cols=255 Identities=23% Similarity=0.377 Sum_probs=200.4
Q ss_pred CCCCCCceecccCCeEEEEEEEC----CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR----DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
++|++.+.||+|+||.||+|.++ .+..||+|.+..... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888999999999999999864 356899998865322 2235688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++|+|.+++... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+...
T Consensus 85 ~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 85 TEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 9999999999998753 24689999999999999999999999 9999999999999999999999999987653
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
.... ........++..|+|||++.+..++.++|||||||++||+++ |+.||..... . ..........
T Consensus 158 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~---~---~~~~~~~~~~----- 225 (266)
T cd05064 158 KSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG---Q---DVIKAVEDGF----- 225 (266)
T ss_pred cccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH---H---HHHHHHHCCC-----
Confidence 2211 111112335678999999999899999999999999999875 9999864321 1 1111111110
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
. .+.+. .....+.+++.+||+.+|++||++.++.+.|.++
T Consensus 226 -~--~~~~~---~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 -R--LPAPR---NCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -C--CCCCC---CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0 01111 1223567788899999999999999999998764
No 76
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.6e-34 Score=334.78 Aligned_cols=200 Identities=27% Similarity=0.438 Sum_probs=173.1
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
.++|++.++||+|+||.||+|++. ++..+|+|.+.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999987 57778888765432 2223568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+++|+|.+++... ..+++..+..++.+++.|++|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 84 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 84 HMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999998753 35788999999999999999999752 799999999999999999999999999875532
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCC
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
.. .....|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 157 SM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred hc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 11 13456899999999999888999999999999999999999999753
No 77
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=9.2e-35 Score=329.10 Aligned_cols=259 Identities=25% Similarity=0.454 Sum_probs=204.2
Q ss_pred CCCCCCceecccCCeEEEEEEECC------CCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD------GSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 1000 (1237)
++|.+.+.||+|+||.||+|+..+ +..||+|++...... ..+.+.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457788899999999999998743 468999988654333 3467899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhh---------cCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCce
Q 000889 1001 LVYEYMKWGSLESVLHDRA---------KGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEA 1071 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~---------~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~v 1071 (1237)
+||||+++++|.++++... ......+++..+..++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999997642 11234578999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHH
Q 000889 1072 RVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAK 1150 (1237)
Q Consensus 1072 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 1150 (1237)
||+|||+++...............+++.|+|||++.+..++.++||||+||++|||++ |..||..... ... ..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~---~~~---~~ 235 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN---EEV---IE 235 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH---HHH---HH
Confidence 9999999986543322222233446788999999999999999999999999999998 9999864321 111 11
Q ss_pred HHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1151 QLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
... ...... . . ......+.+++.+||..+|++||++.|+++.|++
T Consensus 236 ~~~-~~~~~~-----~--~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 236 CIT-QGRLLQ-----R--P---RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHH-cCCcCC-----C--C---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111 111100 0 0 1122356788889999999999999999998863
No 78
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.1e-35 Score=324.65 Aligned_cols=249 Identities=31% Similarity=0.532 Sum_probs=192.4
Q ss_pred CceecccCCeEEEEEEEC-----CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 933 DSMIGSGGFGEVYKAQLR-----DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.+.||.|.||.||+|++. .+..|+||.+..... +..+.+.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 468999999999999987 256799998854322 23578999999999999999999999999888899999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++|+|.+++.... ...+++..+..|+.|+++||+|||+. +++|+||+++||+++.++.+||+|||+++......
T Consensus 84 ~~g~L~~~L~~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 84 PGGSLDDYLKSKN---KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp TTEBHHHHHHHTC---TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccc---cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999998762 24789999999999999999999999 99999999999999999999999999998763333
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.............|+|||.+.+..++.++||||||+++||+++ |+.||... ....+...........
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~------~~~~~~~~~~~~~~~~------ 225 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY------DNEEIIEKLKQGQRLP------ 225 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS------CHHHHHHHHHTTEETT------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc------ccccccccccccccce------
Confidence 3333344557789999999998889999999999999999999 67887532 1122222222222111
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.+.. ....+.+++.+||+.+|++|||+.++++.|
T Consensus 226 --~~~~---~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 --IPDN---CPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --SBTT---SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --eccc---hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1111 123466788899999999999999999876
No 79
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=7.4e-35 Score=335.74 Aligned_cols=260 Identities=24% Similarity=0.400 Sum_probs=204.1
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CC----EEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GS----VVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
.+|+..+.||+|+||.||+|++.. +. .||+|++.... ....+++.+|+.+++.++||||+++++++.. +..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~-~~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-CCcee
Confidence 468899999999999999998652 33 38899876432 2334578899999999999999999999875 45789
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
|+||+++|+|.+++.... ..+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 86 v~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 999999999999997642 3578889999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
..............++..|+|||++.+..++.++|||||||++|||++ |+.||..... ..+........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~------~~~~~~~~~~~---- 228 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------SEISSILEKGE---- 228 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHhCCC----
Confidence 654433333233345678999999999899999999999999999998 9999864321 11111111110
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccC
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTE 1212 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~ 1212 (1237)
..+.+.. ....+.+++.+||+.+|++||++.++++.+..+..+..
T Consensus 229 ----~~~~~~~---~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 229 ----RLPQPPI---CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred ----CCCCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 0111111 12356788889999999999999999999998876553
No 80
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-34 Score=323.90 Aligned_cols=261 Identities=23% Similarity=0.373 Sum_probs=208.2
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57899999999999999999876 688999998753221 22346788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++..... ....+++..+..++.|+++|++|||+. +++||||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 82 ELADAGDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999999999875432 234678899999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.... ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ....+....... ..
T Consensus 158 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~~------~~ 225 (267)
T cd08228 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKIEQC------DY 225 (267)
T ss_pred chhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHHhcC------CC
Confidence 3221 11234688899999999888899999999999999999999999864321 111222211110 11
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
+... .......+.+++.+||+.+|++||++.++++.+++++
T Consensus 226 ~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 226 PPLP----TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCCC----hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1111 1122346778889999999999999999999999875
No 81
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.1e-34 Score=321.58 Aligned_cols=250 Identities=27% Similarity=0.455 Sum_probs=200.5
Q ss_pred CCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+|++.+.||+|+||.||+|+++++..+|+|.+... ....+++.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 47788899999999999999988888999987532 33456789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.++........
T Consensus 84 ~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 84 GCLLNYLRQRQ----GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred CcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 99999987532 3588999999999999999999999 9999999999999999999999999999765332211
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
......++..|+|||++.+..++.++||||||+++|||++ |+.||..... ............ ...+.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~------~~~~~~i~~~~~---~~~~~-- 224 (256)
T cd05114 157 -SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN------YEVVEMISRGFR---LYRPK-- 224 (256)
T ss_pred -ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHCCCC---CCCCC--
Confidence 1122335668999999998889999999999999999999 8999864321 111111111111 00111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
. ....+.+++.+||+.+|++||++.++++.|
T Consensus 225 ---~---~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 ---L---ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---C---CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1 123567889999999999999999999876
No 82
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-34 Score=340.33 Aligned_cols=261 Identities=19% Similarity=0.213 Sum_probs=197.1
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
..+|++.+.||+|+||.||+|++. +++.||+|+.. ...+.+|++++++++||||+++++++......++|||+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999986 57889999643 23567899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+. ++|..++... ..+++..++.++.|++.||+|||+. +||||||||+||+++.++.+||+|||+|+.....
T Consensus 165 ~~-~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 165 YK-TDLYCYLAAK-----RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred CC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 95 7888887653 3578999999999999999999999 9999999999999999999999999999754322
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCC-----chHHHHHHHHhhh-----
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDD-----NNLVGWAKQLHRE----- 1155 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~----- 1155 (1237)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ..+..........
T Consensus 236 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 236 NA-NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred cc-cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 21 122346799999999999988999999999999999999999988754321110 0111111000000
Q ss_pred ----cccccc---------cCccccCCC-CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1156 ----KRINEI---------LDPELTMQT-SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1156 ----~~~~~~---------~~~~l~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
...... ..+...... .......++.+++.+|++.||++|||+.|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000 000000000 001123467788999999999999999999975
No 83
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.6e-35 Score=334.09 Aligned_cols=266 Identities=22% Similarity=0.299 Sum_probs=197.5
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367999999999999999999987 688999998864332 223457789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 84 YVH-TDLCQYMDKH----PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred CCC-cCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 996 6888887653 24578889999999999999999999 999999999999999999999999999975432
Q ss_pred CCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh--hccc---
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR--EKRI--- 1158 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~--- 1158 (1237)
.. .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||...... ...+......... ....
T Consensus 156 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 156 PS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI-QDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred CC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHhCCCChhhccch
Confidence 22 12234568999999999865 45788999999999999999999999753210 0001000000000 0000
Q ss_pred ---ccccCccccC--CCCCH------HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 ---NEILDPELTM--QTSDE------TELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ---~~~~~~~l~~--~~~~~------~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.......... +.... .....+.+++.+|++.||++|||+.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0000000000 00000 011346688889999999999999999875
No 84
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9.4e-35 Score=335.98 Aligned_cols=242 Identities=21% Similarity=0.305 Sum_probs=194.4
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999876 58899999886432 223456788999999999999999999999999999999999999
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcce
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHL 1089 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~ 1089 (1237)
+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~ 150 (328)
T cd05593 81 ELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--A 150 (328)
T ss_pred CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--c
Confidence 999888653 4688999999999999999999999 99999999999999999999999999987532211 1
Q ss_pred eeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCC
Q 000889 1090 SVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQ 1169 (1237)
Q Consensus 1090 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1169 (1237)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... +..++
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~------~~~~~~~~~~-------~~~~p-- 215 (328)
T cd05593 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILME-------DIKFP-- 215 (328)
T ss_pred ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH------HHHHHHhccC-------CccCC--
Confidence 22346799999999999988999999999999999999999999964321 1111111100 01111
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1170 TSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1170 ~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
... ..++.+++.+|++++|++|| ++.+++++
T Consensus 216 ~~~---~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 216 RTL---SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCC---CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 111 13456788899999999997 89999876
No 85
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.3e-34 Score=324.29 Aligned_cols=255 Identities=24% Similarity=0.399 Sum_probs=204.6
Q ss_pred CCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
++|++.++||+|+||.||+|...++..||+|++... ....+.+.+|+.++++++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 468889999999999999999888888999987542 2345678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.+++.... ...+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~L~~~l~~~~---~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 85 KGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 999999997542 24678889999999999999999999 999999999999999999999999999987643221
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .... ....... ..
T Consensus 159 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~---~~~~~~~------~~-- 223 (261)
T cd05072 159 T-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---SDVM---SALQRGY------RM-- 223 (261)
T ss_pred e-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---HHHH---HHHHcCC------CC--
Confidence 1 1123345678999999988889999999999999999998 9999864321 1111 1111110 00
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
+.... ....+.+++.+|++.+|++||++.++.+.|+++
T Consensus 224 ~~~~~---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 PRMEN---CPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCC---CCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 01111 123567888899999999999999999999864
No 86
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=7.2e-35 Score=334.89 Aligned_cols=240 Identities=24% Similarity=0.350 Sum_probs=191.9
Q ss_pred ecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 936 IGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 936 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999987 47889999886422 22345678899999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceee
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSV 1091 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~ 1091 (1237)
.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 ~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~ 150 (312)
T cd05585 81 FHHLQRE-----GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD--KT 150 (312)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC--cc
Confidence 9998753 3688999999999999999999999 999999999999999999999999999975432221 22
Q ss_pred eccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCC
Q 000889 1092 STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTS 1171 (1237)
Q Consensus 1092 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1171 (1237)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......... .....+..
T Consensus 151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~------~~~~~~~~~~---------~~~~~~~~ 215 (312)
T cd05585 151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN------VNEMYRKILQ---------EPLRFPDG 215 (312)
T ss_pred ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC------HHHHHHHHHc---------CCCCCCCc
Confidence 34679999999999999899999999999999999999999997432 1111111111 11111111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCC---HHHHHHH
Q 000889 1172 DETELYQYLRISFECLDDRPFKRPT---MIQVMAM 1203 (1237)
Q Consensus 1172 ~~~~~~~l~~li~~cl~~dP~~RPt---~~ell~~ 1203 (1237)
.+ ..+.+++.+|++.+|++||+ +.+++++
T Consensus 216 ~~---~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 216 FD---RDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CC---HHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 11 34567888999999999985 6666654
No 87
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-35 Score=325.04 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=211.4
Q ss_pred CCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 930 FSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
.....+||-|.||.||.|.|+. .-.||||.++... ...++|.+|..+|+.++|||+|+++|+|..+..+|||+|||..
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 4456789999999999999985 5579999886533 4567899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+|+++..+ ..++......++.||+.|++||..+ ++||||+.++|+|+.++..|||+|||+++.+.. +++
T Consensus 348 GNLLdYLRecnr---~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg-DTY 420 (1157)
T KOG4278|consen 348 GNLLDYLRECNR---SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTG-DTY 420 (1157)
T ss_pred ccHHHHHHHhch---hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcC-Cce
Confidence 999999998754 4677788899999999999999999 999999999999999999999999999998865 333
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
.......-+..|.|||.+....++.|+|||+|||++||+.| |..||.+ .++.+....+.... ++.
T Consensus 421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG------idlSqVY~LLEkgy--------RM~ 486 (1157)
T KOG4278|consen 421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYGLLEKGY--------RMD 486 (1157)
T ss_pred ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC------ccHHHHHHHHhccc--------ccc
Confidence 33334455778999999999999999999999999999998 8888764 23333333333222 233
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccc
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVD 1210 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~ 1210 (1237)
.+..+++ .+.++++.||++.|.+||++.|+-+.++.+..+
T Consensus 487 ~PeGCPp---kVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 487 GPEGCPP---KVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred CCCCCCH---HHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 3344444 455677799999999999999999999877543
No 88
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2e-34 Score=322.75 Aligned_cols=256 Identities=27% Similarity=0.440 Sum_probs=205.2
Q ss_pred hCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.++|++.+.||+|+||.||+|.+.+++.||+|.+... ....+++.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCC-cccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 3568889999999999999999887888999988643 234567899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.... +..+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 84 KYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred cCCcHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 9999999997643 34689999999999999999999999 99999999999999999999999999998765321
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.. .......+..|+|||++.+..++.++||||||+++|||++ |+.||..... ... ........ .
T Consensus 158 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~---~~~~~~~~------~-- 222 (261)
T cd05068 158 YE-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AEV---LQQVDQGY------R-- 222 (261)
T ss_pred cc-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HHH---HHHHHcCC------C--
Confidence 11 1111223457999999998899999999999999999999 9999864321 111 11111110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
.... ......+.+++.+|++.+|++||++.++++.|+++
T Consensus 223 ~~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 MPCP---PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCCC---CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0001 11224577888999999999999999999999864
No 89
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.5e-34 Score=329.24 Aligned_cols=264 Identities=27% Similarity=0.446 Sum_probs=208.2
Q ss_pred CCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
.+|.+.+.||+|+||.||+|+.. ++..+++|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35778889999999999999753 245688888765444445678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhc-----------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCc
Q 000889 1002 VYEYMKWGSLESVLHDRAK-----------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFE 1070 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~ 1070 (1237)
||||+++++|.+++..... .....+++..++.++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 9999999999999975421 1123588999999999999999999999 9999999999999999999
Q ss_pred eEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHH
Q 000889 1071 ARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWA 1149 (1237)
Q Consensus 1071 vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 1149 (1237)
+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||..... .. ..
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~---~~ 235 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN---TE---VI 235 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HH---HH
Confidence 99999999976544332222234456788999999998899999999999999999998 9999864321 11 11
Q ss_pred HHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccccc
Q 000889 1150 KQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDT 1211 (1237)
Q Consensus 1150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~ 1211 (1237)
.... ...... . . ......+.+++.+||+++|++|||+.++++.|+++....
T Consensus 236 ~~~~-~~~~~~-----~--~---~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 236 ECIT-QGRVLE-----R--P---RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred HHHh-CCCCCC-----C--C---ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 1111 111110 0 0 112245778899999999999999999999999987644
No 90
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-35 Score=298.96 Aligned_cols=254 Identities=24% Similarity=0.341 Sum_probs=203.5
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc----CcCHH----HHHHHHHHHHhc-CCCCcccccceEEe
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT----GQGDR----EFMAEMETIGKI-KHRNLVPLLGYCKI 995 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~----~~~~E~~~l~~l-~h~niv~l~~~~~~ 995 (1237)
..+.|...+.+|.|..++|.++.++ +|+.+|+|++.... .+... .-.+|+.+++++ .||+|+++.++++.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3456888889999999999998776 57889999886322 12222 345699999998 59999999999999
Q ss_pred CCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEee
Q 000889 996 GEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSD 1075 (1237)
Q Consensus 996 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~D 1075 (1237)
..-.++|+|.|+.|.|.+|+... ..+++...++|+.|+.+|++|||.. .|||||+||+|||+|++.++||+|
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEec
Confidence 99999999999999999999875 5789999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeeeccccCCCcCCccccCc------cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHH
Q 000889 1076 FGMARLVNALDTHLSVSTLAGTPGYVPPEYYQS------FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWA 1149 (1237)
Q Consensus 1076 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~ 1149 (1237)
||+|+...... +....||||+|.|||.+.. ..|+..+|+|++||+||-++.|.+||.... .-.+
T Consensus 167 FGFa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-------QmlM 236 (411)
T KOG0599|consen 167 FGFACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-------QMLM 236 (411)
T ss_pred cceeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-------HHHH
Confidence 99999876543 3467899999999999853 357888999999999999999999985321 1111
Q ss_pred HHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1150 KQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
-....++.... -.+ ...+......++|.+|++.||++|.|+.|++++=
T Consensus 237 LR~ImeGkyqF-~sp------eWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 237 LRMIMEGKYQF-RSP------EWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred HHHHHhccccc-CCc------chhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 11222221110 111 1123344567888999999999999999999873
No 91
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.6e-34 Score=333.52 Aligned_cols=242 Identities=23% Similarity=0.318 Sum_probs=193.3
Q ss_pred ceecccCCeEEEEEEEC----CCCEEEEEEecccc----CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 934 SMIGSGGFGEVYKAQLR----DGSVVAIKKLIHVT----GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+.||+|+||.||+++.. .++.||+|.+.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999863 57889999886422 12234577899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++|+|.+++... ..+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 82 LSGGELFMHLERE-----GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred CCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 9999999998653 3578888889999999999999999 9999999999999999999999999999754322
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.. ......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ........ ...
T Consensus 154 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~------~~~~~~~~---------~~~ 216 (323)
T cd05584 154 GT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR------KKTIDKIL---------KGK 216 (323)
T ss_pred CC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH------HHHHHHHH---------cCC
Confidence 21 12345799999999999988899999999999999999999999974321 11111111 111
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
...+... ...+.+++.+|++++|++|| ++.+++++
T Consensus 217 ~~~~~~~---~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 217 LNLPPYL---TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCCCCCC---CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 1111111 13466788899999999999 88888875
No 92
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.4e-35 Score=351.84 Aligned_cols=257 Identities=27% Similarity=0.361 Sum_probs=203.2
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCC-----
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE----- 997 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 997 (1237)
..++|++.+.||+|+||+||+|++. +++.||+|++.... ......+.+|+..+..++|+||+++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 3568999999999999999999875 68999999886432 223345788999999999999999988775432
Q ss_pred ---eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEe
Q 000889 998 ---ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVS 1074 (1237)
Q Consensus 998 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~ 1074 (1237)
..++||||+++|+|.+++..+... ...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~-~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKT-NRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 368999999999999999765432 35789999999999999999999999 99999999999999999999999
Q ss_pred ecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh
Q 000889 1075 DFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR 1154 (1237)
Q Consensus 1075 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1154 (1237)
|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..........
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~~~~ 259 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHKTLA 259 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHhc
Confidence 9999987654332223345679999999999999899999999999999999999999997432 1111111111
Q ss_pred hcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1155 EKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1155 ~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. . .++ + +.. ....+.+++.+||+.+|.+||++.+++++
T Consensus 260 ~-~----~~~-~--~~~---~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 260 G-R----YDP-L--PPS---ISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred C-C----CCC-C--CCC---CCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1 0 010 1 111 12356788889999999999999999875
No 93
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.1e-34 Score=338.13 Aligned_cols=269 Identities=23% Similarity=0.332 Sum_probs=197.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeC-----CeEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG-----EERL 1000 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 1000 (1237)
+|++.++||+|+||.||+|++. ++..||+|++.... ......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999976 58899999886422 22345688999999999999999999987543 2479
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccce
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1080 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~ 1080 (1237)
+||||+. ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 81 VVFELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 9999995 7898888653 4689999999999999999999999 99999999999999999999999999997
Q ss_pred eeccCCc-ceeeeccccCCCcCCccccCc--cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh----
Q 000889 1081 LVNALDT-HLSVSTLAGTPGYVPPEYYQS--FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH---- 1153 (1237)
Q Consensus 1081 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---- 1153 (1237)
....... ........|++.|+|||++.+ ..++.++||||+||++|||++|+.||....... .........
T Consensus 152 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~---~~~~~~~~~~~~~ 228 (338)
T cd07859 152 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH---QLDLITDLLGTPS 228 (338)
T ss_pred ccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCC
Confidence 5432221 112234578999999999875 578899999999999999999999996532110 000000000
Q ss_pred -------hhcc---cccccCccccCCC--CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhccc
Q 000889 1154 -------REKR---INEILDPELTMQT--SDETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQV 1209 (1237)
Q Consensus 1154 -------~~~~---~~~~~~~~l~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~ 1209 (1237)
.... ....+........ ..+.....+.+++.+|++.+|++|||+.+++++ +..+..
T Consensus 229 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0000 0000000000000 000112346788899999999999999999987 444433
No 94
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.2e-34 Score=338.02 Aligned_cols=202 Identities=25% Similarity=0.370 Sum_probs=174.4
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46889999999999999999876 57899999886432 122346788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 81 EFLPGGDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred cCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 999999999999753 4689999999999999999999999 99999999999999999999999999997543
Q ss_pred cCCcc---------------------------------eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcC
Q 000889 1084 ALDTH---------------------------------LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSG 1130 (1237)
Q Consensus 1084 ~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg 1130 (1237)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence 21100 001235799999999999998999999999999999999999
Q ss_pred CCCCCCC
Q 000889 1131 KRPIDPS 1137 (1237)
Q Consensus 1131 ~~p~~~~ 1137 (1237)
+.||...
T Consensus 233 ~~Pf~~~ 239 (363)
T cd05628 233 YPPFCSE 239 (363)
T ss_pred CCCCCCC
Confidence 9999743
No 95
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.5e-34 Score=325.11 Aligned_cols=260 Identities=26% Similarity=0.395 Sum_probs=201.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCC----EEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGS----VVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
++|++.+.||+|+||+||+|++. ++. .+++|++..... ....++..|+..+++++||||+++++++. +...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 46788899999999999999875 344 367776643221 12346777888999999999999999875 456789
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
++||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 86 i~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR----DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEeCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 999999999999997542 4689999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
..............++..|+|||++.+..++.++||||||+++||+++ |+.||..... ... ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~---~~~~~~~~~~-- 230 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP---HEV---PDLLEKGERL-- 230 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHH---HHHHHCCCcC--
Confidence 654333333344567789999999998899999999999999999998 9999864321 111 1111111110
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccC
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTE 1212 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~ 1212 (1237)
..+ ... ...+.+++.+||..+|++|||+.++++.|..+..+..
T Consensus 231 -~~~-----~~~---~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~ 273 (279)
T cd05111 231 -AQP-----QIC---TIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPP 273 (279)
T ss_pred -CCC-----CCC---CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCc
Confidence 011 111 1245678889999999999999999999999887663
No 96
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.1e-34 Score=321.16 Aligned_cols=256 Identities=25% Similarity=0.452 Sum_probs=203.6
Q ss_pred CCCCCCceecccCCeEEEEEEECC----CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD----GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
++|++.+.||+|+||+||+|+++. ...||+|++..... ....++.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 468889999999999999998753 35789998764322 2345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++++|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++..
T Consensus 84 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 84 TEYMENGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEcCCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 99999999999987532 3689999999999999999999999 9999999999999999999999999999877
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
.............++..|+|||.+.+..++.++||||||+++|||++ |..||.... .... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~---~~~~---~~~~~~~~~~--- 227 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS---NQDV---IKAVEDGYRL--- 227 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC---HHHH---HHHHHcCCCC---
Confidence 53232222223345678999999998889999999999999999998 999985322 1111 1111111000
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
+... .....+.+++.+|++.+|++||++.+++++|+++
T Consensus 228 -----~~~~---~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 -----PPPM---DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -----CCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011 1223567889999999999999999999999875
No 97
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.6e-34 Score=323.55 Aligned_cols=256 Identities=27% Similarity=0.462 Sum_probs=207.5
Q ss_pred hCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
..+|++.++||+|+||.||+|++.++..+|+|.+.........++.+|+++++.++||||+++++++...+..++||||+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 34688889999999999999999888999999987655445667899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.... +..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 85 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 85 EKGSLLAFLRSPE---GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred ccCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 9999999997642 34689999999999999999999999 99999999999999999999999999997654321
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
. ......++..|+|||++.+..++.++||||||+++|+|++ |+.||..... ..... ...... .
T Consensus 159 ~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~~---~~~~~~--------~ 222 (261)
T cd05148 159 Y--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVYD---QITAGY--------R 222 (261)
T ss_pred c--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHHH---HHHhCC--------c
Confidence 1 1123345678999999988889999999999999999998 8999864321 11111 111110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
...+.. ....+.+++.+|++.+|.+|||+.++++.|+.+
T Consensus 223 ~~~~~~---~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 MPCPAK---CPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCCCC---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 111111 223567888899999999999999999999864
No 98
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.7e-34 Score=326.22 Aligned_cols=261 Identities=24% Similarity=0.370 Sum_probs=202.0
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCe
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEE 998 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 998 (1237)
+.++|++.+.||+|+||.||+|.+. .+..||+|++..... ....++.+|+.+++.++||||+++++++..+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567999999999999999999864 245799998753221 223468899999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHHhhhhcC-----CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEE
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKG-----GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARV 1073 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl 1073 (1237)
.++||||+++|+|.++++..... .....++..+..++.|+++|++|||+. +++||||||+||++++++.+|+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999999753221 123467888999999999999999999 9999999999999999999999
Q ss_pred eecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHH
Q 000889 1074 SDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQL 1152 (1237)
Q Consensus 1074 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 1152 (1237)
+|||+++...............+++.|||||++.+..++.++|||||||++|||++ |..||..... .......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~------~~~~~~~ 234 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN------EQVLRFV 234 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH
Confidence 99999976543332222223345778999999998889999999999999999999 7888864321 1111111
Q ss_pred hhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1153 HREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1153 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
. ...... .+.. ....+.+++.+|++.+|++|||+.++++.|++
T Consensus 235 ~-~~~~~~-------~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 M-EGGLLD-------KPDN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred H-cCCcCC-------CCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1 111100 0111 22357788899999999999999999998864
No 99
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-35 Score=324.96 Aligned_cols=254 Identities=25% Similarity=0.405 Sum_probs=207.4
Q ss_pred hCCCCCCceecccCCeEEEEEEECCCCEEEEEEecccc--CcCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVT--GQGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
...|++.+.||+||.+.||++...+.+.+|+|++.... .+...-|..|+..+.+++ |.+||++++|-..++..||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 34588899999999999999999888899999886432 223456899999999995 999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||-+ .+|..+++++.. ....| .++.+..|++.|+.++|.. ||||.|+||.|+++-+ |.+||+|||.|..+.
T Consensus 440 E~Gd-~DL~kiL~k~~~---~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 440 ECGD-IDLNKILKKKKS---IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred eccc-ccHHHHHHhccC---CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 9865 799999987532 23334 7788999999999999999 9999999999999865 589999999999988
Q ss_pred cCCcceeeeccccCCCcCCccccCcc-----------ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHH
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSF-----------RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQL 1152 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1152 (1237)
...+.......+||+.|||||.+... +.+.++||||+|||+|+|+.|++||.. +.
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~--------~~------ 576 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ--------II------ 576 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH--------HH------
Confidence 87788878889999999999998543 256789999999999999999999852 11
Q ss_pred hhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1153 HREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1153 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
....++..+.++.-.+++.......++++++..|+..||++|||+.+++++
T Consensus 577 n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 577 NQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 112234445555444444333333448899999999999999999999986
No 100
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.6e-34 Score=334.96 Aligned_cols=263 Identities=27% Similarity=0.440 Sum_probs=202.6
Q ss_pred CCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccC-cCHHHHHHHHHHHHhc-CCCCcccccceEEe-CCe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTG-QGDREFMAEMETIGKI-KHRNLVPLLGYCKI-GEE 998 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~~ 998 (1237)
++|++.+.||+|+||.||+|+.. .++.||+|++..... ...+.+..|+.+++++ +||||+++++++.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46888999999999999999743 246899998864322 2234577899999999 89999999998764 456
Q ss_pred EEEEEEeccCCCHHHHHhhhhcC--------------------------------------------------------C
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKG--------------------------------------------------------G 1022 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------------~ 1022 (1237)
.+++|||+++++|.+++...... .
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 78999999999999998643210 0
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCC
Q 000889 1023 GTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVP 1102 (1237)
Q Consensus 1023 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~a 1102 (1237)
...+++..+.+++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.+.............++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 13678999999999999999999999 999999999999999999999999999987644333222334456778999
Q ss_pred ccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHH
Q 000889 1103 PEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLR 1181 (1237)
Q Consensus 1103 PE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 1181 (1237)
||++.+..++.++||||+||++|||++ |..||...... ..+. ........ ... + .....++.+
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--~~~~---~~~~~~~~------~~~--~---~~~~~~~~~ 307 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--EEFC---RRLKEGTR------MRA--P---EYATPEIYS 307 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--HHHH---HHHhccCC------CCC--C---ccCCHHHHH
Confidence 999999999999999999999999997 99998653221 1111 11111100 000 0 112245778
Q ss_pred HHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1182 ISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1182 li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
++.+||+.+|++||++.+++++|+++..
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 8899999999999999999999987643
No 101
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.3e-34 Score=338.71 Aligned_cols=247 Identities=28% Similarity=0.423 Sum_probs=191.3
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
+|+..++||+|+||.||+|++. +++.||+|++..... .....+.+|++++++++|+||+++++++...+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4566788999999999999976 588999998854322 22356889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++|+|.+. ....+..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 155 ~~~~L~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 155 DGGSLEGT---------HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred CCCccccc---------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99998642 2345677788999999999999999 99999999999999999999999999998664322
Q ss_pred cceeeeccccCCCcCCccccCc-----cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQS-----FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
. ......||..|+|||++.. ...+.++|||||||++|||++|+.||...... .+...........
T Consensus 223 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~---~~~~~~~~~~~~~----- 292 (353)
T PLN00034 223 D--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG---DWASLMCAICMSQ----- 292 (353)
T ss_pred c--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc---cHHHHHHHHhccC-----
Confidence 1 1234578999999998743 23456899999999999999999999743221 1111111110000
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+.. . .....++.+++.+||+.+|++|||+.|++++
T Consensus 293 -~~~~--~---~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 -PPEA--P---ATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -CCCC--C---CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0 1122357788889999999999999999987
No 102
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.4e-34 Score=329.38 Aligned_cols=264 Identities=23% Similarity=0.341 Sum_probs=193.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC--CCCEEEEEEeccccC--cCHHHHHHHHHHHHhc---CCCCcccccceEEe-----
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR--DGSVVAIKKLIHVTG--QGDREFMAEMETIGKI---KHRNLVPLLGYCKI----- 995 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 995 (1237)
++|++.+.||+|+||+||+|++. ++..||+|++..... .....+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36889999999999999999874 367899998864322 2234566777777766 69999999998852
Q ss_pred CCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEee
Q 000889 996 GEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSD 1075 (1237)
Q Consensus 996 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~D 1075 (1237)
....++||||++ ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcc
Confidence 456899999997 68999987542 24588999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh-
Q 000889 1076 FGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR- 1154 (1237)
Q Consensus 1076 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~- 1154 (1237)
||+++..... .......|++.|+|||++.+..++.++||||+||++|||++|++||...... ..+.........
T Consensus 154 fg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~--~~~~~i~~~~~~~ 228 (290)
T cd07862 154 FGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--DQLGKILDVIGLP 228 (290)
T ss_pred ccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHHhCCC
Confidence 9999865432 1224457899999999998888999999999999999999999999754211 111111110000
Q ss_pred -hcccc-------cccCccccCC--CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1155 -EKRIN-------EILDPELTMQ--TSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1155 -~~~~~-------~~~~~~l~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..... ....+..... ...+.....+.+++.+|++.+|++|||+.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred ChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00000 0000000000 0000112345688999999999999999999863
No 103
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=8.4e-35 Score=340.71 Aligned_cols=253 Identities=24% Similarity=0.345 Sum_probs=202.2
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||+||+|++. +++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999987 68899999986432 233456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 81 EYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 999999999999764 4688999999999999999999998 99999999999999999999999999998654
Q ss_pred cCC---------------------------cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCC
Q 000889 1084 ALD---------------------------THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDP 1136 (1237)
Q Consensus 1084 ~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~ 1136 (1237)
... .........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 332 01122345689999999999999999999999999999999999999975
Q ss_pred CCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCC-HHHHHHH
Q 000889 1137 SEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPT-MIQVMAM 1203 (1237)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~ell~~ 1203 (1237)
... ...+.......... ..+.... ....+.+++.+|+. +|.+||+ +.+++++
T Consensus 233 ~~~-----~~~~~~i~~~~~~~------~~p~~~~---~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 233 DTL-----QETYNKIINWKESL------RFPPDPP---VSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCH-----HHHHHHHhccCCcc------cCCCCCC---CCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 431 11111111000000 0111000 12356677889997 9999999 9999987
No 104
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.7e-34 Score=339.50 Aligned_cols=253 Identities=22% Similarity=0.266 Sum_probs=194.0
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
.|+..+.||+|+||+||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999876 57899999986432 1224568889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++.+..
T Consensus 82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~ 153 (381)
T cd05626 82 YIPGGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRW 153 (381)
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccc
Confidence 99999999998753 3578889999999999999999999 999999999999999999999999999864311
Q ss_pred CCc---------------------------------------------ceeeeccccCCCcCCccccCccccCcccchHH
Q 000889 1085 LDT---------------------------------------------HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYS 1119 (1237)
Q Consensus 1085 ~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS 1119 (1237)
... .......+||+.|||||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (381)
T cd05626 154 THNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWS 233 (381)
T ss_pred ccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceee
Confidence 000 00012357999999999999888999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHh--ccccCCCCCCCH
Q 000889 1120 YGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFE--CLDDRPFKRPTM 1197 (1237)
Q Consensus 1120 lGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~--cl~~dP~~RPt~ 1197 (1237)
+||++|||++|+.||...... . .... ...... ....+....... ++.+++.+ |+..+|..||++
T Consensus 234 lG~il~elltG~~Pf~~~~~~---~--~~~~-i~~~~~-----~~~~~~~~~~s~---~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 234 VGVILFEMLVGQPPFLAPTPT---E--TQLK-VINWEN-----TLHIPPQVKLSP---EAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred hhhHHHHHHhCCCCCcCCCHH---H--HHHH-HHcccc-----ccCCCCCCCCCH---HHHHHHHHHccCcccccCCCCH
Confidence 999999999999999753211 0 0000 000000 001111111122 34455555 556677779999
Q ss_pred HHHHHH
Q 000889 1198 IQVMAM 1203 (1237)
Q Consensus 1198 ~ell~~ 1203 (1237)
.+++++
T Consensus 300 ~~~l~h 305 (381)
T cd05626 300 DDIKAH 305 (381)
T ss_pred HHHhcC
Confidence 999987
No 105
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-34 Score=333.98 Aligned_cols=252 Identities=20% Similarity=0.291 Sum_probs=196.8
Q ss_pred CCCCCceecccCCeEEEEEEEC----CCCEEEEEEecccc----CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR----DGSVVAIKKLIHVT----GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 999 (1237)
+|++.+.||+|+||.||+|+.. ++..||+|++.... ....+.+..|+++++++ +||+|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4788899999999999999863 57899999886422 12234577899999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~ 152 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLS 152 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCC
Confidence 9999999999999998753 4688999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+........ ......||+.|||||++.+. .++.++|||||||++|||++|+.||........ ..........
T Consensus 153 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~~~~~~~~---- 225 (332)
T cd05614 153 KEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT--QSEVSRRILK---- 225 (332)
T ss_pred ccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--HHHHHHHHhc----
Confidence 865432221 12345799999999999865 478899999999999999999999974322211 1111111110
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
.++.++ ... ...+.+++.+|++.||++|| ++.+++++
T Consensus 226 ---~~~~~~--~~~---~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 226 ---CDPPFP--SFI---GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred ---CCCCCC--CCC---CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 111111 111 12456788899999999999 77788765
No 106
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.4e-34 Score=334.64 Aligned_cols=242 Identities=20% Similarity=0.294 Sum_probs=193.3
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
+.||+|+||.||+|+.. ++..||+|.+.... ......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999876 68899999886432 122345678999999999999999999999999999999999999
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHH-SCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~- 151 (325)
T cd05594 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA- 151 (325)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-
Confidence 999888653 468999999999999999999997 6 999999999999999999999999999875432221
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
......||+.|||||++.+..++.++||||+||++|||++|+.||..... ........ .. ...+
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~------~~~~~~i~-~~------~~~~-- 215 (325)
T cd05594 152 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELIL-ME------EIRF-- 215 (325)
T ss_pred -ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH------HHHHHHHh-cC------CCCC--
Confidence 22345799999999999998999999999999999999999999964321 11111110 00 0011
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
+... ..++.+++.+|++.||++|+ ++.+++++
T Consensus 216 p~~~---~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 216 PRTL---SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCC---CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 1111 12456788899999999996 89999876
No 107
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.5e-34 Score=331.40 Aligned_cols=242 Identities=26% Similarity=0.367 Sum_probs=191.8
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
++||+|+||+||+|+++ +++.||+|++.... ....+.+..|.++++.. +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999987 57899999886432 23345677888888876 699999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~- 151 (320)
T cd05590 81 GDLMFHIQKS-----RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK- 151 (320)
T ss_pred chHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-
Confidence 9999988753 4688999999999999999999999 999999999999999999999999999875432211
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... ....
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~------~~~~~~i~~~---------~~~~ 215 (320)
T cd05590 152 -TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAILND---------EVVY 215 (320)
T ss_pred -cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcC---------CCCC
Confidence 22346799999999999988999999999999999999999999974321 1111111111 1111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTM------IQVMAM 1203 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~ell~~ 1203 (1237)
+.. ....+.+++.+|++.||++||++ .+++++
T Consensus 216 ~~~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 216 PTW---LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCC---CCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 111 12345678889999999999998 556554
No 108
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.5e-34 Score=324.93 Aligned_cols=252 Identities=27% Similarity=0.346 Sum_probs=199.3
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
+|++.++||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999976 58899999886422 1223457789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+++|+|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||+++....
T Consensus 81 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05605 81 LMNGGDLKFHIYNMG---NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPE 154 (285)
T ss_pred ccCCCcHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 999999998886532 24689999999999999999999999 999999999999999999999999999986543
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
... .....|++.|+|||++.+..++.++||||+||++|||++|+.||....... ....+..... .. ..
T Consensus 155 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~--~~~~~~~~~~-~~------~~ 222 (285)
T cd05605 155 GET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV--KREEVERRVK-ED------QE 222 (285)
T ss_pred CCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh--HHHHHHHHhh-hc------cc
Confidence 221 234578999999999998889999999999999999999999997532110 1111111100 00 00
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
.. .......+.+++.+|++.||++|| ++.+++++
T Consensus 223 ~~-----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 223 EY-----SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cc-----CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00 111223567888899999999999 88888766
No 109
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.8e-34 Score=330.37 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=194.2
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
++||+|+||.||+|++. +++.||+|.+.... ....+.+.+|..+++++ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999986 57899999886432 12234577899999998 699999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-- 150 (329)
T cd05588 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-- 150 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCC--
Confidence 9999888653 4689999999999999999999999 99999999999999999999999999987432211
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCC--CchHHHHHHHHhhhcccccccCccc
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGD--DNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||+.....+ ......+......... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 222 (329)
T cd05588 151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--------I 222 (329)
T ss_pred CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--------C
Confidence 12234679999999999999899999999999999999999999997432211 1111112111111111 1
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCC------HHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPT------MIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt------~~ell~~ 1203 (1237)
..+... ...+.+++.+|++.+|.+||+ +.+++++
T Consensus 223 ~~p~~~---~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 223 RIPRSL---SVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CCCCCC---CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 111111 124567888999999999997 6777765
No 110
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.6e-34 Score=339.36 Aligned_cols=253 Identities=24% Similarity=0.329 Sum_probs=198.5
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 457889999999999999999986 57899999886422 22334577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 122 ~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 122 MEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 999999999999864 2477888889999999999999999 9999999999999999999999999999865
Q ss_pred ccCCcceeeeccccCCCcCCccccCcc----ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSF----RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
..... .......||+.|||||++.+. .++.++||||+||++|||++|+.||..... ...+.........
T Consensus 193 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~~i~~~~~~- 265 (370)
T cd05596 193 DANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMDHKNS- 265 (370)
T ss_pred cCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-----HHHHHHHHcCCCc-
Confidence 43221 122356799999999998653 478899999999999999999999975321 1111111110000
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFK--RPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~ell~~ 1203 (1237)
...+... .....+.+++.+|+..+|.+ ||++.+++++
T Consensus 266 -----~~~~~~~---~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 266 -----LTFPDDI---EISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -----CCCCCcC---CCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0111100 11235567888999999987 9999999887
No 111
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.4e-34 Score=339.13 Aligned_cols=254 Identities=23% Similarity=0.329 Sum_probs=196.4
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
..++|++.+.||+|+||.||+|++. +++.+|+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3567999999999999999999987 47789999885322 2234457889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+|+.
T Consensus 121 v~Ey~~gg~L~~~l~~------~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 121 VMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEeccccee
Confidence 9999999999999864 2578888999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeeeccccCCCcCCccccCcc----ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSF----RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR 1157 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1157 (1237)
..... ........||+.|||||++.+. .++.++||||+||++|||++|+.||..... ...+ ........
T Consensus 192 ~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-----~~~~-~~i~~~~~ 264 (370)
T cd05621 192 MDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-----VGTY-SKIMDHKN 264 (370)
T ss_pred cccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-----HHHH-HHHHhCCc
Confidence 64322 1222456799999999998754 378899999999999999999999974321 1111 11111100
Q ss_pred cccccCccccCCCCCHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 000889 1158 INEILDPELTMQTSDETELYQYLRISFECLDDRPFK--RPTMIQVMAM 1203 (1237)
Q Consensus 1158 ~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~ell~~ 1203 (1237)
....+... .....+.+++.+|+..++.+ ||++.+++++
T Consensus 265 -----~~~~p~~~---~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 265 -----SLNFPEDV---EISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -----ccCCCCcc---cCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 00111111 11224456677888755543 8999999988
No 112
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.9e-34 Score=330.12 Aligned_cols=249 Identities=24% Similarity=0.340 Sum_probs=192.5
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999986 578899998875322 2234567888888777 799999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|..++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~- 151 (329)
T cd05618 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD- 151 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-
Confidence 9999888653 4689999999999999999999999 999999999999999999999999999975322111
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCC--CchHHHHHHHHhhhcccccccCccc
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGD--DNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+......... .
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--------~ 222 (329)
T cd05618 152 -TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--------I 222 (329)
T ss_pred -ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC--------C
Confidence 1234679999999999999999999999999999999999999996422111 1111111111111111 1
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCC------HHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPT------MIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt------~~ell~~ 1203 (1237)
..+... ...+.+++.+|++.||++||+ +.+++++
T Consensus 223 ~~p~~~---~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 223 RIPRSL---SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCC---CHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 111111 234567888999999999998 4676655
No 113
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.8e-34 Score=331.49 Aligned_cols=242 Identities=25% Similarity=0.356 Sum_probs=192.6
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
++||+|+||.||+|++. +++.||+|++.... ....+.+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36899999999999987 47899999886432 22334577889988876 799999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~- 151 (321)
T cd05591 81 GDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV- 151 (321)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCc-
Confidence 9999988653 4688899999999999999999999 999999999999999999999999999975432221
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... ....
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~------~~~~~~i~~~---------~~~~ 215 (321)
T cd05591 152 -TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE------DDLFESILHD---------DVLY 215 (321)
T ss_pred -cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH------HHHHHHHHcC---------CCCC
Confidence 22346789999999999988999999999999999999999999974321 1111111111 1111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCC-------CHHHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRP-------TMIQVMAM 1203 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RP-------t~~ell~~ 1203 (1237)
+... ..++.+++.+|++.+|++|| ++.+++++
T Consensus 216 p~~~---~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 216 PVWL---SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCC---CHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1111 13466788899999999999 78888766
No 114
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.6e-34 Score=338.19 Aligned_cols=253 Identities=22% Similarity=0.287 Sum_probs=197.4
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||+||+|++. +++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46889999999999999999986 58899999986432 223345778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 81 EYLPGGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred CCCCCcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 999999999998753 3689999999999999999999999 99999999999999999999999999997543
Q ss_pred cCCcce------------------------------------eeeccccCCCcCCccccCccccCcccchHHHHHHHHHH
Q 000889 1084 ALDTHL------------------------------------SVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLEL 1127 (1237)
Q Consensus 1084 ~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el 1127 (1237)
...... .....+||+.|+|||++.+..++.++||||+||++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 211100 01124699999999999998999999999999999999
Q ss_pred HcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCC---HHHHHHH
Q 000889 1128 LSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPT---MIQVMAM 1203 (1237)
Q Consensus 1128 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~ell~~ 1203 (1237)
++|+.||..... ........... . ....+...... ..+.+++.+|+. +|.+|++ +.+++++
T Consensus 233 ~~G~~Pf~~~~~------~~~~~~i~~~~---~--~~~~~~~~~~s---~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 233 LVGYPPFCSDNP------QETYRKIINWK---E--TLQFPDEVPLS---PEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred hcCCCCCCCCCH------HHHHHHHHcCC---C--ccCCCCCCCCC---HHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999999974321 11111111000 0 00011111112 244567778886 8999998 9988875
No 115
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.6e-34 Score=332.15 Aligned_cols=245 Identities=25% Similarity=0.345 Sum_probs=192.7
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHH---HhcCCCCcccccceEEeCCeEEEE
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETI---GKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|.+++ ++++||||+++++++..++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667889999999999999876 58899999986432 22234566676655 566899999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++|+|..+++. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05589 81 MEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEG 151 (324)
T ss_pred EcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence 999999999888753 3689999999999999999999999 9999999999999999999999999998753
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.... .......|++.|||||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 152 ~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~------~~~~~~i~~~------- 216 (324)
T cd05589 152 MGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE------EEVFDSIVND------- 216 (324)
T ss_pred CCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhC-------
Confidence 3222 122456799999999999998999999999999999999999999974321 1111111111
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
....+... ...+.+++.+|++.||.+|| ++.+++++
T Consensus 217 --~~~~p~~~---~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 217 --EVRYPRFL---SREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred --CCCCCCCC---CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 00111111 23456788899999999999 57777765
No 116
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.5e-34 Score=325.11 Aligned_cols=261 Identities=27% Similarity=0.421 Sum_probs=203.3
Q ss_pred CCCCCceecccCCeEEEEEEECC------CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD------GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
+|++.+.||+|+||.||+|+... ...+++|.+..... ...+++.+|+.++++++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 47788999999999999998642 24678887754322 224568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhc-------------------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 000889 1002 VYEYMKWGSLESVLHDRAK-------------------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSN 1062 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~N 1062 (1237)
||||+++|+|.+++..... .....+++..+..++.|++.|++|||+. +++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 9999999999999875321 1124578999999999999999999999 99999999999
Q ss_pred eeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCC
Q 000889 1063 VLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGD 1141 (1237)
Q Consensus 1063 Ill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~ 1141 (1237)
|++++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-- 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 9999999999999999986543333222233456778999999988889999999999999999998 9999864321
Q ss_pred CchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1142 DNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1142 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
..+..+ .... ..... +.. ...++.+++.+|++.+|++||++.++++.|+++..
T Consensus 236 -~~~~~~---~~~~------~~~~~--~~~---~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 -ERLFNL---LKTG------YRMER--PEN---CSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -HHHHHH---HhCC------CCCCC--CCC---CCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 111111 1110 01111 111 12357788899999999999999999999998753
No 117
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.3e-34 Score=342.17 Aligned_cols=253 Identities=21% Similarity=0.285 Sum_probs=194.6
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888999999999999999876 68899999886432 122356788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 81 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 81 EFLPGGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 999999999998753 4678889999999999999999999 99999999999999999999999999996432
Q ss_pred cCCcc---------------------------------------------eeeeccccCCCcCCccccCccccCcccchH
Q 000889 1084 ALDTH---------------------------------------------LSVSTLAGTPGYVPPEYYQSFRCTTKGDVY 1118 (1237)
Q Consensus 1084 ~~~~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw 1118 (1237)
..... ......+||+.|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 232 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence 11000 000124699999999999998999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCC---C
Q 000889 1119 SYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKR---P 1195 (1237)
Q Consensus 1119 SlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~R---P 1195 (1237)
|+||++|||++|+.||..... ...+ ....... . ...++..... ...+.+++.+|+. +|.+| +
T Consensus 233 SlGvil~elltG~~Pf~~~~~-----~~~~-~~i~~~~---~--~~~~p~~~~~---s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 233 SLGAIMFECLIGWPPFCSENS-----HETY-RKIINWR---E--TLYFPDDIHL---SVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred ecchhhhhhhcCCCCCCCCCH-----HHHH-HHHHccC---C--ccCCCCCCCC---CHHHHHHHHHHhc-CHhhcCCCC
Confidence 999999999999999964321 1111 1111000 0 0001110011 1245677778887 66665 6
Q ss_pred CHHHHHHH
Q 000889 1196 TMIQVMAM 1203 (1237)
Q Consensus 1196 t~~ell~~ 1203 (1237)
++.+++++
T Consensus 298 ~~~~~l~h 305 (377)
T cd05629 298 GAHEIKSH 305 (377)
T ss_pred CHHHHhcC
Confidence 99999887
No 118
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.6e-34 Score=324.72 Aligned_cols=259 Identities=24% Similarity=0.430 Sum_probs=201.5
Q ss_pred CCCCCCceecccCCeEEEEEEEC-----CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-----DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
.+|++.+.||+|+||.||+|+.. .+..||+|.+..... .....+.+|++++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 35778899999999999999852 457899998864322 223568889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhc------------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC
Q 000889 1002 VYEYMKWGSLESVLHDRAK------------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF 1069 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~ 1069 (1237)
||||+++++|.+++..... .....+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999999864321 0123578889999999999999999999 999999999999999999
Q ss_pred ceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHH
Q 000889 1070 EARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGW 1148 (1237)
Q Consensus 1070 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~ 1148 (1237)
.+|++|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||..... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~---~~~--- 235 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN---QEV--- 235 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---HHH---
Confidence 999999999986644332222234456778999999988889999999999999999998 9889864321 111
Q ss_pred HHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1149 AKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1149 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
...... ... +...... ...+.+++.+|++.+|++||++.++.++|..
T Consensus 236 ~~~~~~-~~~-------~~~~~~~---~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 IEMVRK-RQL-------LPCSEDC---PPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHc-CCc-------CCCCCCC---CHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111 110 1111111 2356778889999999999999999998864
No 119
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.9e-34 Score=320.16 Aligned_cols=258 Identities=24% Similarity=0.415 Sum_probs=200.8
Q ss_pred CCCCceecccCCeEEEEEEECC----CCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCe-----
Q 000889 930 FSADSMIGSGGFGEVYKAQLRD----GSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEE----- 998 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 998 (1237)
|++.+.||+|+||.||+|.... +..||+|++..... .....+.+|++.++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999998752 36799998864322 223568899999999999999999998866554
Q ss_pred -EEEEEEeccCCCHHHHHhhhhcC-CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 999 -RLLVYEYMKWGSLESVLHDRAKG-GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 999 -~~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
.++||||+++|+|..++...... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 79999999999999998664322 234689999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhh
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHRE 1155 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1155 (1237)
|+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.... ... ........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~---~~~---~~~~~~~~ 231 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE---NHE---IYDYLRHG 231 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---HHH---HHHHHHcC
Confidence 99987654333222222345678999999988889999999999999999999 888886432 111 11111111
Q ss_pred cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1156 KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1156 ~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
.. ...+. .....+.+++.+|++.+|++|||+.++++.|+++
T Consensus 232 ~~--------~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 NR--------LKQPE---DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC--------CCCCc---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10 00111 1223677888899999999999999999999876
No 120
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.4e-34 Score=318.80 Aligned_cols=251 Identities=26% Similarity=0.415 Sum_probs=200.7
Q ss_pred CCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+|++.+.||+|+||.||+|++.++..+|+|.+... ......+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 57788899999999999999887778999987642 23456789999999999999999999999988899999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++.... ..+++..++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.++.......
T Consensus 84 ~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05113 84 GCLLNYLREHG----KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY- 155 (256)
T ss_pred CcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce-
Confidence 99999987532 3689999999999999999999999 999999999999999999999999999986543221
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||..... . ............ ...
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~---~~~~~~~~~~~~------~~~ 223 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---S---ETVEKVSQGLRL------YRP 223 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---H---HHHHHHhcCCCC------CCC
Confidence 11122345678999999988889999999999999999998 9999864321 1 111111111110 000
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
. .....+.+++.+||+.+|++|||+.++++.++
T Consensus 224 --~---~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 --H---LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --C---CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0 11246778889999999999999999998764
No 121
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-34 Score=327.47 Aligned_cols=252 Identities=25% Similarity=0.314 Sum_probs=207.2
Q ss_pred HhCCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcC---HHHHHHHHHHHHhcC-CCCcccccceEEeCCeEE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQG---DREFMAEMETIGKIK-HRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 1000 (1237)
....|++.+.||+|.||.||+++.+. |+.+|+|.+.+..... ...+.+|+.+|+++. |||||.+++++++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 34568888999999999999999885 9999999997654433 357899999999998 999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC----CCceEEeec
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE----NFEARVSDF 1076 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~----~~~vkl~Df 1076 (1237)
+|||++.||.|.+.+... .+++..+..++.|++.|+.|||+. +|||||+||+|+|+.. ++.+|++||
T Consensus 113 lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DF 183 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDF 183 (382)
T ss_pred EEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeC
Confidence 999999999999999765 289999999999999999999999 9999999999999963 357999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhc
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREK 1156 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1156 (1237)
|+|..... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||....... .. . .....
T Consensus 184 Gla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~--~~---~--~i~~~ 253 (382)
T KOG0032|consen 184 GLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE--IF---L--AILRG 253 (382)
T ss_pred CCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH--HH---H--HHHcC
Confidence 99998765 334567899999999999999999999999999999999999999997543211 00 0 01111
Q ss_pred ccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1157 RINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1157 ~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. .+..+. .+.......+++..|+..||.+|+|+.+++++
T Consensus 254 ~~------~f~~~~-w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 254 DF------DFTSEP-WDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CC------CCCCCC-ccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11 111111 11223445577789999999999999999997
No 122
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.1e-34 Score=328.17 Aligned_cols=241 Identities=27% Similarity=0.378 Sum_probs=188.5
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
++||+|+||.||+|++. +++.||+|++.... ....+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999986 47789999886432 22234456677777654 899999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-- 150 (316)
T cd05592 81 GDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-- 150 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--
Confidence 9999988653 3688899999999999999999999 99999999999999999999999999997643322
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... .+.+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~-------~~~~-- 215 (316)
T cd05592 151 GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE------DELFDSILND-------RPHF-- 215 (316)
T ss_pred CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcC-------CCCC--
Confidence 222456799999999999988899999999999999999999999974321 1111111100 0111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMI-QVMA 1202 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-ell~ 1202 (1237)
+... ..++.+++.+|++.+|++||++. ++++
T Consensus 216 ~~~~---~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 216 PRWI---SKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCC---CHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1111 12456778899999999999875 5544
No 123
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.4e-34 Score=330.30 Aligned_cols=247 Identities=26% Similarity=0.336 Sum_probs=194.4
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCC-CcccccceEEeCCeEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHR-NLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 1003 (1237)
+|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+..|.++++.++|+ +|+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999987 46789999886432 23345678899999999764 6888999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05587 81 EYVNGGDLMYHIQQV-----GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENI 152 (324)
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence 999999999998653 3578899999999999999999999 99999999999999999999999999987532
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ... ..... .
T Consensus 153 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~---~~~i~---------~ 215 (324)
T cd05587 153 FGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---DEL---FQSIM---------E 215 (324)
T ss_pred CCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHH---HHHHH---------c
Confidence 2121 22346799999999999998999999999999999999999999974321 111 11111 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTM-----IQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~ell~~ 1203 (1237)
.....+... ...+.+++.+|++.+|.+|++. .++.++
T Consensus 216 ~~~~~~~~~---~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 216 HNVSYPKSL---SKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CCCCCCCCC---CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 011111111 2345678889999999999986 566554
No 124
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7e-34 Score=350.46 Aligned_cols=264 Identities=23% Similarity=0.322 Sum_probs=203.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.++||+|+||.||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999986 5889999998643222 2346889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcC------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 1004 EYMKWGSLESVLHDRAKG------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
||++||+|.+++...... .....++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998753211 123456778899999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcc----------------eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCC
Q 000889 1078 MARLVNALDTH----------------LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGD 1141 (1237)
Q Consensus 1078 la~~~~~~~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~ 1141 (1237)
+++........ .......||+.|||||++.+..++.++||||+||++|||++|+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 99866211100 01123569999999999999999999999999999999999999997532110
Q ss_pred CchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHHhccc
Q 000889 1142 DNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRP-TMIQVMAMFKELQV 1209 (1237)
Q Consensus 1142 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~ell~~L~~l~~ 1209 (1237)
. .+. ... .++....+ .......+.+++.+|++.+|++|| ++.++++.|+....
T Consensus 239 ---i-~~~------~~i---~~P~~~~p--~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ---I-SYR------DVI---LSPIEVAP--YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred ---h-hhh------hhc---cChhhccc--cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0 000 000 00000000 011223566888899999999996 56777777877543
No 125
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.5e-33 Score=316.79 Aligned_cols=261 Identities=26% Similarity=0.415 Sum_probs=208.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999987 78899999875322 222457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++..... ....+++..+..++.++++|++|||+. +++||||+|+||+++.++.++++|||++....
T Consensus 82 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 82 ELADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 99999999999875422 235689999999999999999999999 99999999999999999999999999987654
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
..... .....+++.|+|||.+.+..++.++||||+||++|+|++|+.||.... ............. . .
T Consensus 158 ~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~-~-----~ 225 (267)
T cd08224 158 SKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIEKC-D-----Y 225 (267)
T ss_pred CCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHHhhhhcC-C-----C
Confidence 32211 233468889999999998889999999999999999999999986432 1111111111110 0 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
+..+ .......+.+++.+|+..+|++|||+.++++.++++.
T Consensus 226 ~~~~----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 226 PPLP----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCC----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1111 1122345678888999999999999999999998864
No 126
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.1e-34 Score=325.33 Aligned_cols=262 Identities=27% Similarity=0.425 Sum_probs=205.0
Q ss_pred hCCCCCCceecccCCeEEEEEEECC------CCEEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCe
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD------GSVVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEE 998 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 998 (1237)
.++|++.+.||+|+||.||+|.... ...+|+|.+.... .....++.+|+++++++ +||||+++++++..++.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 3468888999999999999998752 3578999876432 22334688899999999 79999999999999999
Q ss_pred EEEEEEeccCCCHHHHHhhhhc-----------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC
Q 000889 999 RLLVYEYMKWGSLESVLHDRAK-----------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE 1067 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~ 1067 (1237)
.++||||+++|+|.++++.+.. .....+++..++.++.|++.|++|||+. +|+||||||+||+++.
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence 9999999999999999975421 2245789999999999999999999999 9999999999999999
Q ss_pred CCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHH
Q 000889 1068 NFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLV 1146 (1237)
Q Consensus 1068 ~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~ 1146 (1237)
++.+|++|||+++...............++..|+|||++.+..++.++|||||||++||+++ |..||..... .
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~ 241 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------E 241 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH------H
Confidence 99999999999987654332222223345678999999988889999999999999999997 9999864321 1
Q ss_pred HHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1147 GWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
........... ...+. .....+.+++.+|++.+|++|||+.++++.|+.+.
T Consensus 242 ~~~~~~~~~~~--------~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 242 ELFKLLKEGYR--------MEKPQ---NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHHcCCc--------CCCCC---CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11111111110 01111 12235778889999999999999999999998763
No 127
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6e-34 Score=324.89 Aligned_cols=265 Identities=22% Similarity=0.354 Sum_probs=199.9
Q ss_pred CCCCCCceecccCCeEEEEEEECC---------------CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccc
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD---------------GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLG 991 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~ 991 (1237)
++|++.+.||+|+||.||+++..+ ...||+|++..... .....+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578899999999999999997642 22488998764322 22346889999999999999999999
Q ss_pred eEEeCCeEEEEEEeccCCCHHHHHhhhhcC-------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCee
Q 000889 992 YCKIGEERLLVYEYMKWGSLESVLHDRAKG-------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVL 1064 (1237)
Q Consensus 992 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIl 1064 (1237)
++......++||||+++++|.+++...... ....+++..+.+++.|++.|++|||+. +++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 999999999999999999999999653211 112468889999999999999999999 9999999999999
Q ss_pred eCCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc--CCCCCCCCCCCCC
Q 000889 1065 LDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS--GKRPIDPSEFGDD 1142 (1237)
Q Consensus 1065 l~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t--g~~p~~~~~~~~~ 1142 (1237)
++.++.+|++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~--- 238 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD--- 238 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh---
Confidence 99999999999999976543322222233445778999999988889999999999999999998 5667653221
Q ss_pred chHHHH-HHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1143 NNLVGW-AKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1143 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
...... ............... . +.....+.+++.+|++.+|++||++.++++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 EQVIENTGEFFRNQGRQIYLSQ-----T---PLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHHhhhhccccccCCC-----C---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111111 111110000000000 0 0112367889999999999999999999998863
No 128
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.3e-34 Score=324.84 Aligned_cols=264 Identities=26% Similarity=0.405 Sum_probs=206.6
Q ss_pred hCCCCCCceecccCCeEEEEEEEC--------CCCEEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeC
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR--------DGSVVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIG 996 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 996 (1237)
.++|++.+.||+|+||.||+|++. ++..||+|+..... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 346788899999999999999742 24478999876432 23346788999999999 899999999999999
Q ss_pred CeEEEEEEeccCCCHHHHHhhhhcC-----------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 000889 997 EERLLVYEYMKWGSLESVLHDRAKG-----------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLL 1065 (1237)
Q Consensus 997 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll 1065 (1237)
...++||||+++|+|.+++...... ....+++..+..++.|+++|++|||+. +|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 9999999999999999999864321 124578889999999999999999999 99999999999999
Q ss_pred CCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCch
Q 000889 1066 DENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNN 1144 (1237)
Q Consensus 1066 ~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~ 1144 (1237)
+.++.+||+|||.++...............+++.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------ 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 244 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------
Confidence 9999999999999987654333322233456678999999988889999999999999999998 788876432
Q ss_pred HHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccc
Q 000889 1145 LVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVD 1210 (1237)
Q Consensus 1145 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~ 1210 (1237)
...+.......... .... .....+.+++.+||+.+|.+|||+.++++.|+++..-
T Consensus 245 ~~~~~~~~~~~~~~--------~~~~---~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 245 VEELFKLLKEGHRM--------DKPA---NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHHcCCcC--------CCCC---CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 11111211111110 0111 1234567888899999999999999999999887653
No 129
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=8.2e-34 Score=321.32 Aligned_cols=263 Identities=22% Similarity=0.401 Sum_probs=206.9
Q ss_pred hCCCCCCceecccCCeEEEEEEECC-----CCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEe-CCeE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD-----GSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKI-GEER 999 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 999 (1237)
.++|++.+.||+|+||.||+|.+.. +..|++|++.... ......+.+|+.++++++||||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4578889999999999999999875 6788888876432 2234568889999999999999999998765 5678
Q ss_pred EEEEEeccCCCHHHHHhhhhcC---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKG---GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
++++||+++++|.+++...... .+..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999999764321 125689999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhh
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHRE 1155 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1155 (1237)
|+++.+...+.........++..|+|||++.+..++.++||||||+++||+++ |+.||..... .. +.......
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~---~~~~~~~~ 235 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FE---MAAYLKDG 235 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HH---HHHHHHcC
Confidence 99986654333322233446778999999998889999999999999999999 9999864321 11 11111111
Q ss_pred cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1156 KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1156 ~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
... ..... ....+.+++.+||+.+|++|||+.++++.|+++..
T Consensus 236 ~~~--------~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 236 YRL--------AQPIN---CPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCC--------CCCCc---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 110 00111 12356788889999999999999999999998765
No 130
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7e-34 Score=319.45 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=199.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46899999999999999999975 57889999886544445566788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.++++.. ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 89 GGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 999999998653 3678999999999999999999999 99999999999999999999999999998664322
Q ss_pred cceeeeccccCCCcCCccccC---ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQ---SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
. ......|++.|+|||.+. ...++.++||||+||++|||++|+.||........ ...+ ... ....
T Consensus 161 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~--~~~~-----~~~---~~~~ 228 (267)
T cd06646 161 A--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--LFLM-----SKS---NFQP 228 (267)
T ss_pred c--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh--heee-----ecC---CCCC
Confidence 1 123456888999999884 34578899999999999999999999853221100 0000 000 0000
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
+.... .......+.+++.+||+.+|++|||+.++++++
T Consensus 229 ~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 229 PKLKD---KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCcc---ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 11110 111224567888899999999999999998764
No 131
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=7e-34 Score=324.72 Aligned_cols=267 Identities=23% Similarity=0.392 Sum_probs=204.0
Q ss_pred hCCCCCCceecccCCeEEEEEEECC-----------------CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCccc
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD-----------------GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVP 988 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 988 (1237)
.++|++.+.||+|+||.||+|+... +..||+|++..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578899999999999999998653 24578888764322 23457889999999999999999
Q ss_pred ccceEEeCCeEEEEEEeccCCCHHHHHhhhhcC------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 000889 989 LLGYCKIGEERLLVYEYMKWGSLESVLHDRAKG------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSN 1062 (1237)
Q Consensus 989 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~N 1062 (1237)
+++++..++..++||||+++++|.+++...... ....+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 999999999999999999999999999765321 123689999999999999999999999 99999999999
Q ss_pred eeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc--CCCCCCCCCCC
Q 000889 1063 VLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS--GKRPIDPSEFG 1140 (1237)
Q Consensus 1063 Ill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t--g~~p~~~~~~~ 1140 (1237)
|+++.++.++++|||+++.....+.........+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 9999999999999999986544333222334556788999999988889999999999999999998 667775322
Q ss_pred CCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1141 DDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1141 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
..................... ... .....++.+++.+|++.+|++|||+.++++.|++
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 -DQQVIENAGHFFRDDGRQIYL----PRP---PNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred -hHHHHHHHHhccccccccccC----CCc---cCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 111111111110000000000 001 1122467889999999999999999999998863
No 132
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=8.8e-34 Score=319.00 Aligned_cols=256 Identities=24% Similarity=0.384 Sum_probs=191.8
Q ss_pred ceecccCCeEEEEEEECC---CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 934 SMIGSGGFGEVYKAQLRD---GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
+.||+|+||.||+|.+.+ +..+|+|++..... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998753 35788998764332 22346888999999999999999999999889999999999999
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcce
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHL 1089 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~ 1089 (1237)
+|.++++..........++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 999999765433334567788889999999999999999 99999999999999999999999999997544332222
Q ss_pred eeeccccCCCcCCccccCcc-------ccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1090 SVSTLAGTPGYVPPEYYQSF-------RCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1090 ~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
......++..|+|||++.+. .++.++||||||+++|||++ |+.||..... .....+. . .......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---~~~~~~~---~-~~~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD---EQVLTYT---V-REQQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHH---h-hcccCCC
Confidence 22334577889999998642 35789999999999999996 9999964321 1111110 0 1111111
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
.++.... . ....+.+++.+|| .+|++|||+.++++.|+
T Consensus 231 ~~~~~~~--~---~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLKL--P---LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccCC--C---CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1222111 1 1224566778999 58999999999998874
No 133
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.1e-34 Score=322.06 Aligned_cols=248 Identities=27% Similarity=0.334 Sum_probs=194.3
Q ss_pred ecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 936 IGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 936 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
||+|+||+||++++. +++.||+|++...... ..+.+..|++++++++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999876 6789999988643221 224567899999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceee
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSV 1091 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~ 1091 (1237)
.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......... .
T Consensus 81 ~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~ 154 (280)
T cd05608 81 RYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK--T 154 (280)
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--c
Confidence 988854322 235689999999999999999999999 9999999999999999999999999999866443221 2
Q ss_pred eccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCC
Q 000889 1092 STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTS 1171 (1237)
Q Consensus 1092 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1171 (1237)
....|++.|+|||++.+..++.++||||+||++|||++|+.||....... ........ +.......+
T Consensus 155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~---------~~~~~~~~~-- 221 (280)
T cd05608 155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQR---------ILNDSVTYP-- 221 (280)
T ss_pred cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch--hHHHHHHh---------hcccCCCCc--
Confidence 34578999999999999999999999999999999999999997532111 01110110 111111111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1172 DETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1172 ~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
......+.+++.+|++.+|++|| ++.+++++
T Consensus 222 -~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 222 -DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred -ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 11223566788899999999999 77788775
No 134
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=9.1e-34 Score=317.72 Aligned_cols=254 Identities=24% Similarity=0.412 Sum_probs=202.6
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
+|++.+.||+|+||.||+|.++ .++.||+|++.. .....+++.+|++++++++||||+++++++...+..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecC-CchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4777889999999999999876 477899998754 23345678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.+++.... ...+++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 86 ~~~L~~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 86 YGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 999999987542 24689999999999999999999999 999999999999999999999999999986643221
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......++..|+|||++.+..++.++|||||||++|||++ |..||..... .......... .....
T Consensus 160 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------~~~~~~~~~~------~~~~~ 226 (263)
T cd05052 160 T-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYELLEKG------YRMER 226 (263)
T ss_pred e-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHCC------CCCCC
Confidence 1 1122334668999999998899999999999999999998 9999864321 1111111111 01111
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
+.. ....+.+++.+|++.+|++||++.++++.|+.+
T Consensus 227 --~~~---~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 227 --PEG---CPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred --CCC---CCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 111 123567788899999999999999999999875
No 135
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.2e-34 Score=332.55 Aligned_cols=253 Identities=22% Similarity=0.278 Sum_probs=199.6
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36889999999999999999886 588999999874322 23456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 81 EYQPGGDLLSLLNRYE----DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred CCCCCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 9999999999997642 3689999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeeeccccCCCcCCccccC------ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQ------SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR 1157 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1157 (1237)
..... ......||+.|+|||++. +..++.++||||+||++|||++|+.||..... ...+ ........
T Consensus 154 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~-~~i~~~~~ 226 (330)
T cd05601 154 ANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----AKTY-NNIMNFQR 226 (330)
T ss_pred CCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----HHHH-HHHHcCCC
Confidence 43222 223457899999999986 45678899999999999999999999964321 1111 11111111
Q ss_pred cccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1158 INEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1158 ~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. ..+.. ......+.+++.+|++ +|.+|||+.+++++
T Consensus 227 ~~-----~~~~~---~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 FL-----KFPED---PKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred cc-----CCCCC---CCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 00 01110 1112345677778997 99999999999876
No 136
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.1e-33 Score=318.80 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=197.1
Q ss_pred CCCCceecccCCeEEEEEEECCCC---EEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeC------Ce
Q 000889 930 FSADSMIGSGGFGEVYKAQLRDGS---VVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG------EE 998 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~~~---~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 998 (1237)
|.+.++||+|+||.||+|++.... .+|+|.+.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 356788999999999999986433 58888775432 22345688899999999999999999987432 24
Q ss_pred EEEEEEeccCCCHHHHHhhhhc-CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAK-GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
.++||||+++|+|.+++..... .....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 6899999999999998854322 1234589999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhc
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREK 1156 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1156 (1237)
+++...............+++.|+|||+..+..++.++||||||+++|||++ |+.||.... .. ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---~~---~~~~~~~~~~ 231 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE---NS---EIYDYLRQGN 231 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC---HH---HHHHHHHcCC
Confidence 9987644332212223346778999999999899999999999999999999 888886422 11 1111111111
Q ss_pred ccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1157 RINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1157 ~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
.. .... .....+.+++.+||+.+|++|||+.++++.|+++
T Consensus 232 ~~--------~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 RL--------KQPP---DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CC--------CCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 10 0111 1223567888999999999999999999999874
No 137
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.2e-34 Score=323.02 Aligned_cols=260 Identities=27% Similarity=0.381 Sum_probs=201.0
Q ss_pred hCCCCCCceecccCCeEEEEEEECC------CCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD------GSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 999 (1237)
+++|++.+.||+|+||.||+|.+.. +..||+|.+...... ....+.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4568899999999999999998864 456888877543322 234688999999999999999999999988899
Q ss_pred EEEEEeccCCCHHHHHhhhhcC--CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC---ceEEe
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKG--GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF---EARVS 1074 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~---~vkl~ 1074 (1237)
++||||+++++|.+++...... ....+++..+.+++.||+.|++|||+. +++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 9999999999999999765321 123589999999999999999999999 999999999999998654 69999
Q ss_pred ecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHh
Q 000889 1075 DFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLH 1153 (1237)
Q Consensus 1075 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 1153 (1237)
|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||...... . ......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---~---~~~~~~ 235 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---E---VMEFVT 235 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---H---HHHHHH
Confidence 9999986643222211122334568999999998889999999999999999997 99998743211 1 111111
Q ss_pred hhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1154 REKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1154 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
.... ... +.. ....+.+++.+|++.+|++||++.+++++|++
T Consensus 236 ~~~~------~~~--~~~---~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 236 GGGR------LDP--PKG---CPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred cCCc------CCC--CCC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1111 011 111 12356788889999999999999999999863
No 138
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.4e-34 Score=317.31 Aligned_cols=254 Identities=27% Similarity=0.420 Sum_probs=202.0
Q ss_pred CCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
++|++.++||+|+||.||+|++.++..||+|++... ....+.+.+|++++++++||||+++++++. ....++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 468899999999999999999887778999988642 234567899999999999999999999875 456799999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+|+|.+++.... ...+++..+..++.|+++||+|+|+. +++||||||+||++++++.+||+|||.++.......
T Consensus 84 ~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 84 KGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCcHHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 999999997532 24578999999999999999999999 999999999999999999999999999986643322
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......++..|+|||+..+..++.++||||||+++|||++ |..||..... . ......... .. .
T Consensus 158 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~---~---~~~~~~~~~------~~--~ 222 (262)
T cd05071 158 T-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---R---EVLDQVERG------YR--M 222 (262)
T ss_pred c-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh---H---HHHHHHhcC------CC--C
Confidence 1 1123446678999999988889999999999999999999 8888864321 0 111111100 00 0
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
.. .......+.+++.+|++.+|++||++.++++.|++.
T Consensus 223 ~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 PC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CC---ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00 112334677899999999999999999999999864
No 139
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=325.99 Aligned_cols=245 Identities=23% Similarity=0.402 Sum_probs=197.5
Q ss_pred eecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCHHH
Q 000889 935 MIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLES 1013 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 1013 (1237)
++|+|.||+||-|++.+ ...+|||-+........+.+.+|+...++++|.|||+++|++.+++..-|.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 79999999999999875 45688998865555556678899999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCCCcc--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC-CCCceEEeecccceeeccCCccee
Q 000889 1014 VLHDRAKGGGTKL--DWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD-ENFEARVSDFGMARLVNALDTHLS 1090 (1237)
Q Consensus 1014 ~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~-~~~~vkl~DfGla~~~~~~~~~~~ 1090 (1237)
+++..- +++ .+..+-.+..||++||.|||++ .|||||||-+|||+. -.|.+||+|||-+++...... .
T Consensus 662 LLrskW----GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP--~ 732 (1226)
T KOG4279|consen 662 LLRSKW----GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP--C 732 (1226)
T ss_pred HHHhcc----CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCc--c
Confidence 998753 345 7778888999999999999999 999999999999996 689999999999998765432 2
Q ss_pred eeccccCCCcCCccccCcc--ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1091 VSTLAGTPGYVPPEYYQSF--RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1091 ~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
..++.||..|||||++..+ .|+.++|||||||++.||.||++||-... +. .. .+.+-+.. .+.|++
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elg--sp---qA---AMFkVGmy--KvHP~i-- 800 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELG--SP---QA---AMFKVGMY--KVHPPI-- 800 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecC--Ch---hH---hhhhhcce--ecCCCC--
Confidence 3567899999999999764 58899999999999999999999996422 11 00 00111111 112222
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+ .+...+...+|.+|+.+||.+||++.++++-
T Consensus 801 P---eelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 801 P---EELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred c---HHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 1 2334456678889999999999999999853
No 140
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.5e-34 Score=327.33 Aligned_cols=241 Identities=27% Similarity=0.404 Sum_probs=189.9
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
++||+|+||.||+|+++ +++.||+|++.... ....+.+..|.+++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999987 57899999886432 22344567788888764 899999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05620 81 GDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN- 151 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC-
Confidence 9999988653 4678899999999999999999999 999999999999999999999999999875322121
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... .+..+
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~------~~~~~~~~~~-------~~~~~- 216 (316)
T cd05620 152 -RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE------DELFESIRVD-------TPHYP- 216 (316)
T ss_pred -ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhC-------CCCCC-
Confidence 22456799999999999998999999999999999999999999964321 1111111100 11111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMI-QVMA 1202 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-ell~ 1202 (1237)
... ..++.+++.+|++.||++||++. ++.+
T Consensus 217 -~~~---~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 217 -RWI---TKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred -CCC---CHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111 12456788899999999999985 5553
No 141
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.3e-33 Score=317.30 Aligned_cols=261 Identities=25% Similarity=0.397 Sum_probs=207.4
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||.||+|+.. ++..+|+|++..... ....++.+|+++++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46888899999999999999975 788999998754222 22346888999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++++|.+++..... ....+++..++.++.|+++|++|||+. +++|+||||+||+++.++.++++|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 82 ELADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999999875332 235689999999999999999999999 99999999999999999999999999987654
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
..... .....++..|+|||++.+..++.++||||+|+++|||++|..||..... ....+... +.....
T Consensus 158 ~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~------~~~~~~ 225 (267)
T cd08229 158 SKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKK------IEQCDY 225 (267)
T ss_pred cCCcc--cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc----hHHHHhhh------hhcCCC
Confidence 32211 2345688899999999888899999999999999999999999864321 11111111 111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
+... .......+.+++.+||+.+|++|||+.+|++.++++.
T Consensus 226 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 226 PPLP----SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCC----cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1111 1112346778888999999999999999999998764
No 142
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.9e-34 Score=336.06 Aligned_cols=261 Identities=25% Similarity=0.416 Sum_probs=202.2
Q ss_pred CCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccCc-CHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTGQ-GDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 1000 (1237)
+|.+.++||+|+||.||+|+++ .+..||+|++...... ..+.+.+|++++.++. ||||+++++++...+..+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~ 117 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY 117 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence 5777889999999999999864 2457999999753322 2346889999999997 999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhhc------------------------------------------------------------
Q 000889 1001 LVYEYMKWGSLESVLHDRAK------------------------------------------------------------ 1020 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~------------------------------------------------------------ 1020 (1237)
+||||+++|+|.++++....
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 99999999999999975321
Q ss_pred ---------------------------------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC
Q 000889 1021 ---------------------------------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE 1067 (1237)
Q Consensus 1021 ---------------------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~ 1067 (1237)
.....+++..+..++.|++.||+|||+. +|+||||||+||++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICE 274 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeC
Confidence 0112467788899999999999999999 9999999999999999
Q ss_pred CCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHH
Q 000889 1068 NFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLV 1146 (1237)
Q Consensus 1068 ~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~ 1146 (1237)
++.+|++|||+++...............+++.|||||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~--~--- 349 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN--E--- 349 (401)
T ss_pred CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch--H---
Confidence 99999999999986543222222233456789999999998889999999999999999998 88898643211 0
Q ss_pred HHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1147 GWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
.......... +...+.. ...++.+++.+||+.+|++||++.++++.|+.+.
T Consensus 350 ~~~~~~~~~~--------~~~~p~~---~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 QFYNAIKRGY--------RMAKPAH---ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHHHcCC--------CCCCCCC---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0111111110 0111111 1235678888999999999999999999998763
No 143
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.6e-34 Score=326.11 Aligned_cols=241 Identities=27% Similarity=0.394 Sum_probs=190.1
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+.||+|+||+||+|++. +++.||+|++.... ....+.+..|..+++.. +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999987 47789999886432 23344566788888764 899999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05619 81 GDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA- 151 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-
Confidence 9999998753 3678899999999999999999999 999999999999999999999999999975322221
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... . ......... .+..+
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~---~~~~~i~~~-------~~~~~- 216 (316)
T cd05619 152 -KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---E---ELFQSIRMD-------NPCYP- 216 (316)
T ss_pred -ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---H---HHHHHHHhC-------CCCCC-
Confidence 22346789999999999998999999999999999999999999974321 1 111111100 01111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMI-QVMA 1202 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-ell~ 1202 (1237)
.. ....+.+++.+|++.+|++||++. ++.+
T Consensus 217 -~~---~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 217 -RW---LTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred -cc---CCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 11 112456788899999999999997 6654
No 144
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.7e-33 Score=321.29 Aligned_cols=267 Identities=21% Similarity=0.377 Sum_probs=201.3
Q ss_pred hCCCCCCceecccCCeEEEEEEECC-----------------CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCccc
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD-----------------GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVP 988 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 988 (1237)
.++|++.+.||+|+||.||+++..+ ...||+|++..... ....++.+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 3468899999999999999986432 33688888764322 23457889999999999999999
Q ss_pred ccceEEeCCeEEEEEEeccCCCHHHHHhhhhcC------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 000889 989 LLGYCKIGEERLLVYEYMKWGSLESVLHDRAKG------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSN 1062 (1237)
Q Consensus 989 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~N 1062 (1237)
+++++...+..++||||+++|+|.+++...... ....+++..+..++.|++.|++|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 999999999999999999999999999764321 123578889999999999999999999 99999999999
Q ss_pred eeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc--CCCCCCCCCCC
Q 000889 1063 VLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS--GKRPIDPSEFG 1140 (1237)
Q Consensus 1063 Ill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t--g~~p~~~~~~~ 1140 (1237)
|+++.++.+|++|||+++.+.............++..|+|||+..++.++.++|||||||++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD- 239 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh-
Confidence 9999999999999999986543322222223345678999999888889999999999999999998 7778754321
Q ss_pred CCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1141 DDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1141 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
............... .... .+.+.. ....+.+++.+||+.+|++||++.++.+.|++
T Consensus 240 --~~~~~~~~~~~~~~~-~~~~---~~~~~~---~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 --EQVIENTGEFFRDQG-RQVY---LPKPAL---CPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred --HHHHHHHHHHHhhcc-cccc---CCCCCC---CCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111111111000000 0000 011111 12467788899999999999999999998863
No 145
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.9e-34 Score=329.04 Aligned_cols=247 Identities=25% Similarity=0.332 Sum_probs=194.1
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
+|++.+.||+|+||.||+|++. +++.||+|.+.... ....+.+..|.+++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999887 46789999886432 12234566788888777 5899999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~ 152 (323)
T cd05616 81 EYVNGGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENM 152 (323)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence 999999999988653 3588899999999999999999999 99999999999999999999999999997543
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ... ......
T Consensus 153 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~---~~~i~~--------- 215 (323)
T cd05616 153 WDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DEL---FQSIME--------- 215 (323)
T ss_pred CCCC--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHH---HHHHHh---------
Confidence 2221 22356799999999999999999999999999999999999999974321 111 111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTM-----IQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~ell~~ 1203 (1237)
.....+.. ...++.+++.+|++.+|++|+++ .++.++
T Consensus 216 ~~~~~p~~---~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 216 HNVAYPKS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred CCCCCCCc---CCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 11111111 12345678889999999999984 555543
No 146
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.1e-33 Score=320.03 Aligned_cols=259 Identities=25% Similarity=0.405 Sum_probs=202.7
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCC----EEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGS----VVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
.+|+..++||+|+||+||+|++. ++. .||+|++.... ....+.+.+|+.+++.++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 46888899999999999999864 344 47888876432 2234568889999999999999999999864 45789
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
+|||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~~~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK----DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEcCCCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 999999999999987532 4689999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
..............+++.|+|||...+..++.++|||||||++|||++ |..||..... .....+.. .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~---~~~~~-- 230 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---REIPDLLE---KGERL-- 230 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH---CCCcC--
Confidence 654333222223345678999999998899999999999999999998 8999864321 11111111 11100
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccccc
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDT 1211 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~ 1211 (1237)
. .. ......+.+++.+||+.+|++||++.++++.++++..++
T Consensus 231 ----~--~~---~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 231 ----P--QP---PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ----C--CC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0 00 112235678888999999999999999999999887766
No 147
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6e-34 Score=317.03 Aligned_cols=249 Identities=25% Similarity=0.390 Sum_probs=194.0
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
+.||+|+||.||+|++. +++.||+|.+.... .+....+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36899999999999986 68889999875432 22345688999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceee
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSV 1091 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~ 1091 (1237)
.+++... +..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++............
T Consensus 81 ~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 81 LTFLRTE----GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred HHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9998643 23578999999999999999999999 9999999999999999999999999998754422111111
Q ss_pred eccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCC
Q 000889 1092 STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQT 1170 (1237)
Q Consensus 1092 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1170 (1237)
.....+..|+|||.+.+..++.++||||+|+++|||++ |..||..... .. ........ ..... ..
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~---~~---~~~~~~~~------~~~~~--~~ 219 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN---QQ---TREAIEQG------VRLPC--PE 219 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH---HH---HHHHHHcC------CCCCC--cc
Confidence 11223457999999998889999999999999999998 8888853211 01 01111110 00011 11
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1171 SDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1171 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
.....+.+++.+|++.+|++|||+.++++.|++
T Consensus 220 ---~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 220 ---LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 112357788889999999999999999998863
No 148
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8e-34 Score=316.81 Aligned_cols=250 Identities=27% Similarity=0.428 Sum_probs=199.2
Q ss_pred CCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+|++.+.||+|+||.||+|+++++..+|+|.+... ......+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 47788899999999999999887778999987532 23456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
++|.+++.... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 84 ~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 84 GCLLNYLRERK----GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 99999987532 3689999999999999999999999 9999999999999999999999999999765422111
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ... ....... .....
T Consensus 157 -~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~---~~~~~~~------~~~~~- 222 (256)
T cd05059 157 -SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN---SEV---VESVSAG------YRLYR- 222 (256)
T ss_pred -ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH---HHH---HHHHHcC------CcCCC-
Confidence 1112234457999999998899999999999999999999 8999864321 111 1111111 11111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
+. .....+.+++.+||+.+|++|||+.++++.|
T Consensus 223 -~~---~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 -PK---LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -CC---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 11 1233677889999999999999999999886
No 149
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.5e-34 Score=337.32 Aligned_cols=201 Identities=25% Similarity=0.331 Sum_probs=171.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
.|+..++||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999876 57889999886432 1223467889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~ 153 (382)
T cd05625 82 YIPGGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (382)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence 99999999998653 3578888999999999999999999 999999999999999999999999999753211
Q ss_pred CCc---------------------------------------------ceeeeccccCCCcCCccccCccccCcccchHH
Q 000889 1085 LDT---------------------------------------------HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYS 1119 (1237)
Q Consensus 1085 ~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS 1119 (1237)
... .......+||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (382)
T cd05625 154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence 000 00012346899999999999989999999999
Q ss_pred HHHHHHHHHcCCCCCCCC
Q 000889 1120 YGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1120 lGv~l~el~tg~~p~~~~ 1137 (1237)
+||++|||++|+.||...
T Consensus 234 lGvil~elltG~~Pf~~~ 251 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred chHHHHHHHhCCCCCCCC
Confidence 999999999999999753
No 150
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=9.6e-34 Score=321.25 Aligned_cols=268 Identities=25% Similarity=0.381 Sum_probs=199.1
Q ss_pred CCCCceecccCCeEEEEEEE-----CCCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeEEE
Q 000889 930 FSADSMIGSGGFGEVYKAQL-----RDGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EERLL 1001 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 1001 (1237)
|+..+.||+|+||+||++.. .++..||+|.+..... .....+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37889999999999988753 2577899998864322 2356788999999999999999999988653 45789
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
||||+++++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 86 v~e~~~~~~l~~~~~~------~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 86 IMEYVPLGSLRDYLPK------HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EecCCCCCCHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 9999999999999865 2589999999999999999999999 999999999999999999999999999986
Q ss_pred eccCCccee-eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1082 VNALDTHLS-VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1082 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
......... .....++..|+|||.+.+..++.++||||||+++|||++|..||....... ..................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIE 235 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhh
Confidence 654222111 122345667999999988889999999999999999999999986432100 000000000000000111
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
..+.....+ ........+.+++.+||+.+|++|||+.++++.|+++.
T Consensus 236 ~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 236 LLERGMRLP-CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhcCCCCC-CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111110000 01112346778888999999999999999999998875
No 151
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-33 Score=332.27 Aligned_cols=195 Identities=23% Similarity=0.287 Sum_probs=168.2
Q ss_pred hCCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
..+|.+.+.||+|+||.||+|++.. ++.||+|... ...+.+|++++++++|||||++++++..++..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4479999999999999999999874 7789999542 23456899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+. ++|.+++.... ..+++..+..++.|+++||+|||+. +||||||||+|||++.++.+||+|||+++.....
T Consensus 242 ~~-~~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 242 YR-SDLYTYLGARL----RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred cC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 95 78888886532 3689999999999999999999999 9999999999999999999999999999866432
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCC
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPID 1135 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~ 1135 (1237)
..........||+.|||||++.+..++.++|||||||++|||++|..|+.
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 22222234579999999999999899999999999999999999887653
No 152
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=327.46 Aligned_cols=250 Identities=23% Similarity=0.382 Sum_probs=201.2
Q ss_pred CCCCceecccCCeEEEEEEECCCCEE-EEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 930 FSADSMIGSGGFGEVYKAQLRDGSVV-AIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~~~~v-avK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
|.++..||.|+||.||+|..++.... |.|++.-...+...+|+-|++|+..++||+||++++.|-..+..||+.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 56677899999999999998865554 45555444555667899999999999999999999998889999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|-.+.++-.. +..+.+.++..+++|++.||.|||++ .|||||+|+.|||++-+|.++++|||.+.... .+.
T Consensus 114 GAVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~ 184 (1187)
T KOG0579|consen 114 GAVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STR 184 (1187)
T ss_pred chHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch--hHH
Confidence 9999988765 35899999999999999999999999 99999999999999999999999999986433 233
Q ss_pred eeeeccccCCCcCCccccC-----ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQ-----SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.+...+.|||.|||||+.. ..+|++++||||||+++.||..+.+|..... .+......... -.
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln-----pMRVllKiaKS-------eP 252 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKS-------EP 252 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc-----hHHHHHHHhhc-------CC
Confidence 3456789999999999874 4689999999999999999999999964321 11111111111 11
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
|.+. ........|.+++.+|+.++|..||++++++++
T Consensus 253 PTLl---qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 253 PTLL---QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred Cccc---CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 2222 233344567777789999999999999999876
No 153
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.3e-33 Score=326.55 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=193.7
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|..++.++ +||+|+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999986 578899999874322 2234577899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|..++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 151 (327)
T cd05617 81 GDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD- 151 (327)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-
Confidence 9999888653 4689999999999999999999999 999999999999999999999999999975322111
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||.............+......... ...
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 222 (327)
T cd05617 152 -TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP--------IRI 222 (327)
T ss_pred -ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC--------CCC
Confidence 22456799999999999999999999999999999999999999975332222122222111111111 111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTM------IQVMAM 1203 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~ell~~ 1203 (1237)
+...+ ..+.+++.+|++.||.+|+++ .+++++
T Consensus 223 p~~~~---~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 223 PRFLS---VKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCC---HHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 11111 245678889999999999984 566654
No 154
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.9e-34 Score=337.16 Aligned_cols=253 Identities=21% Similarity=0.247 Sum_probs=194.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999976 57899999885422 223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|..+.
T Consensus 81 E~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~ 152 (376)
T cd05598 81 DYIPGGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (376)
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccc
Confidence 999999999999753 3578888899999999999999999 99999999999999999999999999985321
Q ss_pred cCC-----------------------------------------cceeeeccccCCCcCCccccCccccCcccchHHHHH
Q 000889 1084 ALD-----------------------------------------THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGV 1122 (1237)
Q Consensus 1084 ~~~-----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv 1122 (1237)
... .........||+.|||||++.+..++.++||||+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 232 (376)
T cd05598 153 WTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 232 (376)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence 000 000012357999999999999989999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCC---CHHH
Q 000889 1123 ILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRP---TMIQ 1199 (1237)
Q Consensus 1123 ~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP---t~~e 1199 (1237)
++|||++|+.||...... ........... ....+...... ..+.+++.+|+ .+|.+|+ ++.+
T Consensus 233 ilyell~G~~Pf~~~~~~------~~~~~i~~~~~-----~~~~~~~~~~s---~~~~~li~~l~-~~p~~R~~~~t~~e 297 (376)
T cd05598 233 ILYEMLVGQPPFLADTPA------ETQLKVINWET-----TLHIPSQAKLS---REASDLILRLC-CGAEDRLGKNGADE 297 (376)
T ss_pred eeeehhhCCCCCCCCCHH------HHHHHHhccCc-----cccCCCCCCCC---HHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence 999999999999754311 11111110000 00011111111 23445566665 4999999 8999
Q ss_pred HHHH
Q 000889 1200 VMAM 1203 (1237)
Q Consensus 1200 ll~~ 1203 (1237)
++++
T Consensus 298 ll~h 301 (376)
T cd05598 298 IKAH 301 (376)
T ss_pred HhCC
Confidence 9987
No 155
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-33 Score=322.29 Aligned_cols=250 Identities=26% Similarity=0.380 Sum_probs=201.7
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.+|++.+.||+|+||.||+|+.. ++..||+|++..........+.+|+.++++++||||+++++++..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 46888899999999999999875 58899999887655455667889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 100 ~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 100 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred CCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 99999999864 3578889999999999999999999 99999999999999999999999999987654322
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+... .... .+..
T Consensus 171 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-----~~~~~~-~~~~------~~~~ 236 (296)
T cd06654 171 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-----RALYLI-ATNG------TPEL 236 (296)
T ss_pred c--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-----HhHHHH-hcCC------CCCC
Confidence 1 123356889999999999888999999999999999999999999643211 111110 0000 0011
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. .......+.+++.+||.++|++|||+.+++++
T Consensus 237 ~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 QN---PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CC---ccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 10 11122456788889999999999999999985
No 156
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.7e-34 Score=326.74 Aligned_cols=242 Identities=26% Similarity=0.356 Sum_probs=192.9
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+.||+|+||+||+|++. ++..||+|++.... ......+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999987 47789999887432 22344567899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 151 (318)
T cd05570 81 GDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV- 151 (318)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-
Confidence 9999888653 3689999999999999999999999 999999999999999999999999999975322221
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
.....+|++.|+|||++.+..++.++||||+||++|||++|+.||..... .......... ....
T Consensus 152 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~------~~~~~~i~~~---------~~~~ 215 (318)
T cd05570 152 -TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE------DELFQSILED---------EVRY 215 (318)
T ss_pred -cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH------HHHHHHHHcC---------CCCC
Confidence 12345689999999999999999999999999999999999999974321 1111111110 1111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTM-----IQVMAM 1203 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~ell~~ 1203 (1237)
+.. ....+.+++.+|++.||.+||++ .+++++
T Consensus 216 ~~~---~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 216 PRW---LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCc---CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 111 12356688889999999999999 888765
No 157
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.9e-33 Score=313.13 Aligned_cols=253 Identities=27% Similarity=0.432 Sum_probs=201.3
Q ss_pred CCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
++|++.+.||+|+||.||+|...++..+|+|++.... ...+.+.+|+.++++++||+++++++++. ....+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 4688889999999999999998888889999886533 34567899999999999999999999875 456899999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.++++... ...+++..+..++.+++.|++|||+. +++||||||+||++++++.+||+|||.+........
T Consensus 84 ~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 84 KGSLLDFLKDGE---GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 999999987532 24689999999999999999999999 999999999999999999999999999986643221
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......++..|+|||++.+..++.++||||||+++|||++ |..||..... ........... ..
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~------~~~~~~~~~~~------~~-- 222 (260)
T cd05070 158 T-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN------REVLEQVERGY------RM-- 222 (260)
T ss_pred c-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHcCC------CC--
Confidence 1 1122345668999999988889999999999999999999 8889864321 11111111110 00
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
+.+. .....+.+++.+|+.++|++|||+.++.+.|+.
T Consensus 223 ~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQ---DCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCC---cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1111 122357788899999999999999999998875
No 158
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-33 Score=323.47 Aligned_cols=263 Identities=25% Similarity=0.393 Sum_probs=204.0
Q ss_pred CCCCCCceecccCCeEEEEEEECC--------CCEEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCC
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD--------GSVVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGE 997 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 997 (1237)
++|.+.+.||+|+||.||+|++.. ...+|+|.+.... ......+.+|+++++++ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 468899999999999999998632 3469999886432 22345688899999999 7999999999999999
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcC-----------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKG-----------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD 1066 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~ 1066 (1237)
..++||||+++|+|.+++...... ....+++..+.+++.|++.||+|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 999999999999999999764321 123588999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchH
Q 000889 1067 ENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNL 1145 (1237)
Q Consensus 1067 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~ 1145 (1237)
.++.+||+|||.++...............+++.|+|||++.+..++.++||||+||++|||++ |..||.... .
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~------~ 248 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------V 248 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC------H
Confidence 999999999999976543222111122234568999999998889999999999999999998 888885432 1
Q ss_pred HHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccc
Q 000889 1146 VGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVD 1210 (1237)
Q Consensus 1146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~ 1210 (1237)
........... ...... .....+.+++.+|++.+|++|||+.++++.|+++...
T Consensus 249 ~~~~~~~~~~~--------~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 249 EELFKLLKEGH--------RMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHcCC--------CCCCCC---cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 11111111111 001111 1223667888899999999999999999999987654
No 159
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.4e-34 Score=323.36 Aligned_cols=258 Identities=24% Similarity=0.353 Sum_probs=200.2
Q ss_pred CCCCCceecccCCeEEEEEEECC------CCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD------GSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
+|++.+.||+|+||.||+|++.+ +..||+|++...... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 36667889999999999998642 467999988643322 23468889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhc-----------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCc
Q 000889 1002 VYEYMKWGSLESVLHDRAK-----------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFE 1070 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~ 1070 (1237)
++||+++++|.+++..... .....+++..+.+++.|++.||+|+|+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 9999999999999864321 1123578888999999999999999999 9999999999999999999
Q ss_pred eEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHH
Q 000889 1071 ARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWA 1149 (1237)
Q Consensus 1071 vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 1149 (1237)
+||+|||+++...............+++.|+|||++.+..++.++||||+|+++|||++ |..||..... ..+.
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~~ 236 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDVI 236 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH------HHHH
Confidence 99999999886544332222234456789999999988889999999999999999998 8888764321 1111
Q ss_pred HHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1150 KQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
....... .. ..+.. ....+.+++.+||+.+|++||++.++++.|+.
T Consensus 237 ~~i~~~~-~~-------~~~~~---~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 EMIRNRQ-VL-------PCPDD---CPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHcCC-cC-------CCCCC---CCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111111 00 11111 22346688889999999999999999999864
No 160
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.5e-33 Score=318.39 Aligned_cols=247 Identities=24% Similarity=0.318 Sum_probs=192.3
Q ss_pred ecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 936 IGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 936 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
||+|+||.||+++.+ +|+.||+|++.... ....+.+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999876 58899999886322 12234456799999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceee
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSV 1091 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~ 1091 (1237)
.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~ 151 (277)
T cd05607 81 KYHIYNVG---ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TI 151 (277)
T ss_pred HHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---ee
Confidence 98886532 24588999999999999999999999 99999999999999999999999999998664322 22
Q ss_pred eccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCC
Q 000889 1092 STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTS 1171 (1237)
Q Consensus 1092 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1171 (1237)
....|+..|+|||++.+..++.++||||+||++|||++|+.||...... ........... .......
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~--~~~~~~~~~~~---------~~~~~~~-- 218 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK--VAKEELKRRTL---------EDEVKFE-- 218 (277)
T ss_pred eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch--hhHHHHHHHhh---------ccccccc--
Confidence 3456899999999999888999999999999999999999998643211 11111111100 0011000
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1172 DETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1172 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
......++.+++.+|++.+|++||++.|+++..
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 001123467888899999999999997766443
No 161
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=6.5e-34 Score=326.87 Aligned_cols=264 Identities=23% Similarity=0.325 Sum_probs=197.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.+.||+|+||.||+|+++ +++.||+|++..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888999999999999999886 577899998864332 2334677899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
++ ++|.+++... +..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 86 LD-KDLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 98 5888887653 23578899999999999999999999 9999999999999999999999999999764332
Q ss_pred CcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--cccc---
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--KRIN--- 1159 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~--- 1159 (1237)
.. ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ........... ....
T Consensus 158 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 158 TK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE--LHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred cc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCCHHHHhhhc
Confidence 21 1233467899999998865 4688999999999999999999999975432111 11111000000 0000
Q ss_pred ---cccCccccCCC------CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1160 ---EILDPELTMQT------SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1160 ---~~~~~~l~~~~------~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
...+...+... ..+....++.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00000000000 000112345688889999999999999999985
No 162
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=8.1e-34 Score=320.84 Aligned_cols=259 Identities=25% Similarity=0.385 Sum_probs=203.3
Q ss_pred CCCCCCceecccCCeEEEEEEECC------CCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD------GSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 1000 (1237)
++|++.+.||+|+||.||+|.+++ +..||+|.+.... ......+.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 468888999999999999998753 3579999875332 122346889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhhcC-----CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEee
Q 000889 1001 LVYEYMKWGSLESVLHDRAKG-----GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSD 1075 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~D 1075 (1237)
+||||+++|+|.+++...... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECC
Confidence 999999999999999764321 123578899999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhh
Q 000889 1076 FGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHR 1154 (1237)
Q Consensus 1076 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1154 (1237)
||+++.....+.........++..|+|||.+.+..++.++|||||||++||+++ |..||..... ..... ...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~~---~~~- 235 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---EEVLK---FVI- 235 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---HHHHH---HHh-
Confidence 999986544332222234456789999999988889999999999999999998 8999864221 11111 111
Q ss_pred hcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1155 EKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1155 ~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
.... ... +... ...+.+++.+||+.+|++|||+.++++.|++
T Consensus 236 ~~~~-----~~~--~~~~---~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 236 DGGH-----LDL--PENC---PDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred cCCC-----CCC--CCCC---CHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 1110 011 1111 3467788899999999999999999998863
No 163
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.4e-33 Score=326.59 Aligned_cols=263 Identities=25% Similarity=0.418 Sum_probs=201.0
Q ss_pred CCCCCCceecccCCeEEEEEEE------CCCCEEEEEEeccccC-cCHHHHHHHHHHHHhc-CCCCcccccceEEeC-Ce
Q 000889 928 NGFSADSMIGSGGFGEVYKAQL------RDGSVVAIKKLIHVTG-QGDREFMAEMETIGKI-KHRNLVPLLGYCKIG-EE 998 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 998 (1237)
++|++.+.||+|+||+||+|++ .+++.||||++..... ...+.+.+|+.++.++ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4688999999999999999974 2467899998864322 2235688899999999 689999999988654 46
Q ss_pred EEEEEEeccCCCHHHHHhhhhcC---------------------------------------------------------
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKG--------------------------------------------------------- 1021 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------------- 1021 (1237)
.++||||+++|+|.++++.....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 78999999999999998753210
Q ss_pred -----CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeeecccc
Q 000889 1022 -----GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAG 1096 (1237)
Q Consensus 1022 -----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~g 1096 (1237)
....+++..+.+++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++...............+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 012467888899999999999999999 999999999999999999999999999986543322222223445
Q ss_pred CCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHH
Q 000889 1097 TPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETE 1175 (1237)
Q Consensus 1097 t~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1175 (1237)
+..|+|||++.+..++.++||||||+++|||++ |..||...... .. .......... ...+...
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~---~~~~~~~~~~--------~~~~~~~--- 307 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EE---FCRRLKEGTR--------MRAPDYT--- 307 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HH---HHHHHhccCC--------CCCCCCC---
Confidence 678999999988889999999999999999997 99998643211 11 1111111110 0001111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1176 LYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1176 ~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
..++.+++.+||+.+|++|||+.+++++|+.+..
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1256788889999999999999999999998754
No 164
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=8.5e-34 Score=321.92 Aligned_cols=264 Identities=25% Similarity=0.425 Sum_probs=200.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-----CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEe--CCeEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-----DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKI--GEERL 1000 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 1000 (1237)
.+|++.+.||+|+||.||+|..+ ++..||+|++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888899999999999999753 478899999865544445678899999999999999999998754 34679
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccce
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1080 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~ 1080 (1237)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 84 lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred EEEEecCCCCHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccc
Confidence 9999999999999986532 3589999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceee-eccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc--
Q 000889 1081 LVNALDTHLSV-STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR-- 1157 (1237)
Q Consensus 1081 ~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1157 (1237)
........... ....++..|+|||++.+..++.++||||||+++|||++|..|+...... +.........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-------~~~~~~~~~~~~ 229 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-------FMRMMGNDKQGQ 229 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-------hhhhcccccccc
Confidence 76543322111 1122345699999999888999999999999999999988775432110 0000000000
Q ss_pred -----cccccC--ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1158 -----INEILD--PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1158 -----~~~~~~--~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
+.+.+. ....... .....+.+++.+||+.+|++|||+.++++.|+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 230 MIVYHLIELLKNNGRLPAPP---GCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred cchHHHHHHHhcCCcCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 000000 0011111 12235778888999999999999999999998763
No 165
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.7e-34 Score=341.19 Aligned_cols=262 Identities=24% Similarity=0.308 Sum_probs=192.3
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeC--------C
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIG--------E 997 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~ 997 (1237)
..+|++.++||+|+||+||+|+.. +++.||||++... .....+|+.++++++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999986 5789999988532 22345799999999999999999876432 2
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC-ceEEeec
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF-EARVSDF 1076 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~-~vkl~Df 1076 (1237)
..++||||++ +++.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 4679999998 578777764322 235789999999999999999999999 999999999999999654 7999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE 1155 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1155 (1237)
|+|+....... .....||+.|||||++.+. .++.++||||+||++|||++|++||.+.... ..+..........
T Consensus 216 Gla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--~~~~~i~~~~~~p 290 (440)
T PTZ00036 216 GSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV--DQLVRIIQVLGTP 290 (440)
T ss_pred ccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCC
Confidence 99986643222 2345789999999998654 6899999999999999999999999753211 1111111110000
Q ss_pred --c-------cc-----ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1156 --K-------RI-----NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1156 --~-------~~-----~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+ .. ..+....+... .......++.+++.+||+++|.+|||+.+++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKV-FPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHH-hccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0 00 00000000000 000112356788889999999999999999977
No 166
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.6e-33 Score=318.84 Aligned_cols=259 Identities=25% Similarity=0.423 Sum_probs=201.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
.+|+..++||+|+||.||+|+.. ++..+|+|++..........+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 35777889999999999999743 355788888765544445678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhc----------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCce
Q 000889 1002 VYEYMKWGSLESVLHDRAK----------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEA 1071 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~v 1071 (1237)
||||+++++|.+++..... .....+++..+..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999975421 0113578999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHH
Q 000889 1072 RVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAK 1150 (1237)
Q Consensus 1072 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 1150 (1237)
||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||...... . ...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~---~~~ 235 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT---E---AIE 235 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH---H---HHH
Confidence 9999999986543332222223345778999999998899999999999999999998 89998532210 1 111
Q ss_pred HHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1151 QLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
....... .. ..... ...+.+++.+||+.+|.+||++.++.+.|+.
T Consensus 236 ~~~~~~~------~~--~~~~~---~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 236 CITQGRE------LE--RPRTC---PPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHcCcc------CC--CCCCC---CHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1111100 00 01111 2346688889999999999999999998863
No 167
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=326.56 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=202.4
Q ss_pred CCCceecccCCeEEEEEEECC--CC--EEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 931 SADSMIGSGGFGEVYKAQLRD--GS--VVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 931 ~~~~~lG~G~fg~Vy~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
...++||+|.||+|++|.|.. |+ .||||.+...... ...+|.+|+.+|.+|+|||++++||...+ ....||||.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 345689999999999999873 33 5899999765443 56789999999999999999999999876 788999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
++.|+|.+.+++.. ...+.......++.|||.|+.||.++ ++||||+..+|+++-....|||+|||+.+-+...
T Consensus 192 aplGSLldrLrka~---~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAK---KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred cccchHHHHHhhcc---ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999998732 35788888899999999999999999 9999999999999999889999999999987765
Q ss_pred Ccceee-eccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1086 DTHLSV-STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1086 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
+..+.+ ....-...|+|||.+....++.++|||+|||++|||++ |..||.+-.. ....+.... .
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g------~qIL~~iD~--------~ 331 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG------IQILKNIDA--------G 331 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH------HHHHHhccc--------c
Confidence 544433 23445668999999999999999999999999999999 8889875431 111111111 1
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.++..+..+ .+++.+++.+||...|.+|||+..+.+.+
T Consensus 332 erLpRPk~c---sedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 332 ERLPRPKYC---SEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccCCCCCCC---hHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 233333334 44667788899999999999999998554
No 168
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.7e-33 Score=316.64 Aligned_cols=255 Identities=24% Similarity=0.341 Sum_probs=187.1
Q ss_pred eecccCCeEEEEEEECC---CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCC
Q 000889 935 MIGSGGFGEVYKAQLRD---GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGS 1010 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 1010 (1237)
.||+|+||.||+|+... ...+|+|.+..... .....+.+|+++++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997653 34677776653222 223467889999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCccee
Q 000889 1011 LESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLS 1090 (1237)
Q Consensus 1011 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~ 1090 (1237)
|.+++...........++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999775432233456788899999999999999999 999999999999999999999999999875433222222
Q ss_pred eeccccCCCcCCccccCc-------cccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1091 VSTLAGTPGYVPPEYYQS-------FRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1091 ~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.....++..|+|||++.. ..++.++||||+||++|||++ |..||..... ...... ..... ...+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~-~~~~~-~~~~~ 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD-----EQVLKQ-VVREQ-DIKLP 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHH-Hhhcc-CccCC
Confidence 233446678999998743 356789999999999999999 7788764321 111111 11111 11111
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
++.. .......+.+++..|| .||++|||+.+|++.|.
T Consensus 232 ~~~~-----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KPQL-----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCcc-----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111 1112234456777888 59999999999998863
No 169
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-33 Score=323.88 Aligned_cols=268 Identities=26% Similarity=0.416 Sum_probs=206.1
Q ss_pred CCCCCCceecccCCeEEEEEEEC--------CCCEEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCC
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR--------DGSVVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGE 997 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 997 (1237)
++|.+.+.||+|+||.||+|+.. ....+|+|++.... ......+..|+++++++ +||||+++++++....
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46778899999999999999752 24568888876432 22345688899999999 6999999999999889
Q ss_pred eEEEEEEeccCCCHHHHHhhhhc-----------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAK-----------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD 1066 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~ 1066 (1237)
..++||||+++|+|.+++..... .....+++..+.+++.|++.|++|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 99999999999999999976431 1124588999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchH
Q 000889 1067 ENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNL 1145 (1237)
Q Consensus 1067 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~ 1145 (1237)
.++.+||+|||+++...............++..|||||++.+..++.++||||||+++|||++ |..||..... ...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---~~~ 245 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV---EEL 245 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---HHH
Confidence 999999999999986643322211122234567999999988889999999999999999999 8888864321 111
Q ss_pred HHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCCC
Q 000889 1146 VGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGDS 1215 (1237)
Q Consensus 1146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~~ 1215 (1237)
. .... .... ...... ...++.+++.+|++.+|++|||+.++++.|.++........
T Consensus 246 ~---~~~~-~~~~-------~~~~~~---~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 301 (314)
T cd05099 246 F---KLLR-EGHR-------MDKPSN---CTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEY 301 (314)
T ss_pred H---HHHH-cCCC-------CCCCCC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCCc
Confidence 1 1111 1100 011111 12356688889999999999999999999999877554433
No 170
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.8e-33 Score=313.20 Aligned_cols=254 Identities=26% Similarity=0.437 Sum_probs=203.1
Q ss_pred hCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.++|++.++||+|+||.||+|..++++.||+|++.... ....++.+|+.++++++||||+++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 35688899999999999999999889999999886433 34567899999999999999999999874 56789999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.... +..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||++.......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 83 ENGSLVDFLKTPE---GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 9999999986532 34689999999999999999999999 99999999999999999999999999997665322
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.. ......++..|+|||++.+..++.++||||||+++||+++ |+.||..... ... .........
T Consensus 157 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~---~~~~~~~~~-------- 221 (260)
T cd05067 157 YT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN---PEV---IQNLERGYR-------- 221 (260)
T ss_pred cc-cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh---HHH---HHHHHcCCC--------
Confidence 11 1123345678999999998889999999999999999999 9999864321 111 111111110
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
...... ...++.+++.+|++.+|++|||++++.+.|+.
T Consensus 222 ~~~~~~---~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 MPRPDN---CPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCC---CCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 011111 12357788889999999999999999999875
No 171
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.4e-34 Score=329.46 Aligned_cols=238 Identities=23% Similarity=0.317 Sum_probs=189.8
Q ss_pred ceecccCCeEEEEEEE----CCCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 934 SMIGSGGFGEVYKAQL----RDGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
+.||+|+||.||+++. .+++.||+|++..... .....+..|++++++++||||+++++++...+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999975 2578999998864321 233456789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 82 GGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 99999998653 4689999999999999999999999 999999999999999999999999999976543211
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......... ....
T Consensus 154 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~------~~~~~~i~~---------~~~~ 216 (318)
T cd05582 154 --KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR------KETMTMILK---------AKLG 216 (318)
T ss_pred --ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH------HHHHHHHHc---------CCCC
Confidence 22346789999999999988899999999999999999999999974321 111111110 0111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHH
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQ 1199 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 1199 (1237)
.+... ...+.+++.+|++.||++||++.+
T Consensus 217 ~p~~~---~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 MPQFL---SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCC---CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 11111 134567888999999999999544
No 172
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.6e-33 Score=330.62 Aligned_cols=256 Identities=23% Similarity=0.315 Sum_probs=196.8
Q ss_pred HHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEE
Q 000889 925 EATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 925 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 1000 (1237)
...++|++.+.||+|+||.||+|+++ +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..+...+
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 34578999999999999999999987 57789999875322 122345778999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccce
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1080 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~ 1080 (1237)
+||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 120 lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 120 MVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 99999999999999864 2478888899999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccCCCcCCccccCcc----ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhc
Q 000889 1081 LVNALDTHLSVSTLAGTPGYVPPEYYQSF----RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREK 1156 (1237)
Q Consensus 1081 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1156 (1237)
....... .......||+.|||||++.+. .++.++||||+||++|||++|+.||..... ...+ .......
T Consensus 191 ~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~-~~i~~~~ 263 (371)
T cd05622 191 KMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTY-SKIMNHK 263 (371)
T ss_pred EcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-----HHHH-HHHHcCC
Confidence 7643221 122456799999999998754 378899999999999999999999974321 1111 1111110
Q ss_pred ccccccCccccCCCCCHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHH
Q 000889 1157 RINEILDPELTMQTSDETELYQYLRISFECLDDRPFK--RPTMIQVMAMF 1204 (1237)
Q Consensus 1157 ~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~ell~~L 1204 (1237)
. ...++... .....+.+++.+|+..++.+ ||++.+++++.
T Consensus 264 ~-----~~~~~~~~---~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 264 N-----SLTFPDDN---DISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred C-----cccCCCcC---CCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 0 00111111 11234557777899744433 78999999874
No 173
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.1e-33 Score=323.40 Aligned_cols=258 Identities=28% Similarity=0.443 Sum_probs=202.4
Q ss_pred CCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccC-cCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTG-QGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 999 (1237)
++|++.+.||+|+||.||+|... .+..||+|++..... ...+.+.+|+++++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 46888999999999999999752 245789998764322 2235688999999999 799999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||+++|+|.++++.... ..+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+|++|||++
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRE---SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence 999999999999999975321 3489999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+...............++..|+|||++.+..++.++||||+||++|||++ |..||...... ... ..... .. .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--~~~---~~~~~-~~-~ 261 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--SKF---YKLIK-EG-Y 261 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--HHH---HHHHH-cC-C
Confidence 86543322222223446778999999998889999999999999999998 99998643211 111 11111 10 0
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
... .+.. ....+.+++.+|++++|++|||+.++++.|+++
T Consensus 262 ----~~~--~~~~---~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 ----RMA--QPEH---APAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----cCC--CCCC---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 000 0111 123577888999999999999999999999874
No 174
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.6e-33 Score=312.64 Aligned_cols=250 Identities=27% Similarity=0.412 Sum_probs=201.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc--cCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV--TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.+.||+|+||.||+|+.. +++.|++|.+... .....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999986 5888999987532 223455788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.++++... ...+++..++.++.+++.|+.|||+. +++||||||+||+++.++.+|++|||+++.....
T Consensus 81 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 81 AENGDLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred CCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 99999999998642 24788999999999999999999999 9999999999999999999999999999866543
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
... .....|++.|+|||+..+..++.++||||||+++|||++|+.||..... . ....... .... +.
T Consensus 155 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~---~~~~~~~-~~~~-----~~ 220 (256)
T cd08529 155 TNF--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ---G---ALILKII-RGVF-----PP 220 (256)
T ss_pred cch--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---H---HHHHHHH-cCCC-----CC
Confidence 221 2345688899999999988899999999999999999999999974321 0 1111111 1100 01
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. ......+.+++.+||+.+|++||++.+++++
T Consensus 221 ~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 221 VS-----QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred Cc-----cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 10 1122457788899999999999999999874
No 175
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-33 Score=334.00 Aligned_cols=263 Identities=21% Similarity=0.245 Sum_probs=199.8
Q ss_pred hCCCCCCceecccCCeEEEEEEEC---CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR---DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
..+|++.+.||+|+||.||+|... .+..||+|.+... +...+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999764 3567888877532 34568999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+. ++|.+++... ..+++..++.++.|++.||+|||+. +||||||||+||+++.++.+||+|||+++...
T Consensus 166 e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 166 PKYK-CDLFTYVDRS-----GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred hhcC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 9996 6888888432 4689999999999999999999999 99999999999999999999999999998665
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCc-hHHHHHHHHhhh-------
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDN-NLVGWAKQLHRE------- 1155 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~------- 1155 (1237)
............||+.|+|||++.+..++.++||||+||++|||++|+.||.+....... .+..........
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 316 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN 316 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence 433333334567999999999999989999999999999999999999999765432211 111111110000
Q ss_pred ---------cccccccCccccCCCC--CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1156 ---------KRINEILDPELTMQTS--DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1156 ---------~~~~~~~~~~l~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
........+....+.. ......++.+++.+|++.+|++|||+.+++.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000110100000 00112356678889999999999999999987
No 176
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.1e-34 Score=327.48 Aligned_cols=237 Identities=26% Similarity=0.347 Sum_probs=186.2
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHH-HHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEME-TIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+.||+|+||+||+|++. +++.||+|++.... .....++..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999986 58899999886432 122234455544 56789999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 150 (323)
T cd05575 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-- 150 (323)
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--
Confidence 9999988753 4688899999999999999999999 99999999999999999999999999987532211
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......... .....
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~------~~~~~~i~~---------~~~~~ 215 (323)
T cd05575 151 KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT------AEMYDNILN---------KPLRL 215 (323)
T ss_pred CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH------HHHHHHHHc---------CCCCC
Confidence 122345799999999999998999999999999999999999999974321 111111111 11111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMI 1198 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 1198 (1237)
.... ...+.+++.+|++.+|.+||++.
T Consensus 216 ~~~~---~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 KPNI---SVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCC---CHHHHHHHHHHhhcCHHhCCCCC
Confidence 1111 23466788899999999999984
No 177
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9.3e-34 Score=317.04 Aligned_cols=253 Identities=31% Similarity=0.481 Sum_probs=198.9
Q ss_pred CCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHH--HHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 930 FSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDR--EFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
|++.+.||+|+||+||+|+... ++.+|+|.+......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5677899999999999999885 558999988754322222 2356999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||.+.... .
T Consensus 81 ~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~ 150 (260)
T PF00069_consen 81 PGGSLQDYLQKN-----KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS--E 150 (260)
T ss_dssp TTEBHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST--S
T ss_pred cccccccccccc-----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc--c
Confidence 999999999832 4789999999999999999999999 99999999999999999999999999998642 2
Q ss_pred cceeeeccccCCCcCCccccC-ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQ-SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.........++..|+|||++. +..++.++||||+|+++|+|++|..||...... ............... . .
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~~-~-----~ 222 (260)
T PF00069_consen 151 NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKILKRPLP-S-----S 222 (260)
T ss_dssp TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHHHTHHH-H-----H
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhccccccc-c-----c
Confidence 222345667899999999998 888999999999999999999999998754110 111111111110100 0 0
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... .......+.+++.+|++.+|++||++.+++++
T Consensus 223 ~~~---~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 223 SQQ---SREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp TTS---HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ccc---cchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 00011567888999999999999999999864
No 178
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.2e-33 Score=315.18 Aligned_cols=250 Identities=23% Similarity=0.356 Sum_probs=196.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
+|++.++||+|+||.||+|++. ++..||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5788899999999999999875 67889999875432 223456889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~ 149 (279)
T cd06619 82 DGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI 149 (279)
T ss_pred CCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence 999986542 467888889999999999999999 99999999999999999999999999997654322
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCch-HHHHHHHHhhhcccccccCcc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNN-LVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.....|+..|+|||++.+..++.++||||+|+++|+|++|+.||.......... ........... ..+.
T Consensus 150 ----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------~~~~ 219 (279)
T cd06619 150 ----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE------DPPV 219 (279)
T ss_pred ----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc------CCCC
Confidence 234578999999999998889999999999999999999999997532111111 00111100000 0111
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.... ....++.+++.+|++.+|++||++.+++++-
T Consensus 220 ~~~~----~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 220 LPVG----QFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred CCCC----cCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 1111 1123567888899999999999999999873
No 179
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.7e-33 Score=319.90 Aligned_cols=263 Identities=24% Similarity=0.363 Sum_probs=202.8
Q ss_pred hCCCCCCceecccCCeEEEEEEECC------CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD------GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 999 (1237)
.++|++.++||+|+||.||+|..++ +..||+|.+..... .....+.+|+.++++++||||+++++++.+.+..
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 4678999999999999999997542 45799998753321 2234578899999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhcC-----CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEe
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKG-----GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVS 1074 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~ 1074 (1237)
++||||+++|+|.++++..... .....++..+..++.|++.|++|||++ +|+||||||+||+++.++.+|++
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence 9999999999999999764221 123456778899999999999999999 99999999999999999999999
Q ss_pred ecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHh
Q 000889 1075 DFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLH 1153 (1237)
Q Consensus 1075 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 1153 (1237)
|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||..... ..+.....
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~ 235 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN------EQVLKFVM 235 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHH
Confidence 9999986543332222223345678999999998889999999999999999998 7888864321 11111111
Q ss_pred hhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1154 REKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1154 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
..... .. ... ....+.+++.+|++.+|++|||+.++++.+++...
T Consensus 236 ~~~~~------~~--~~~---~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 280 (288)
T cd05061 236 DGGYL------DQ--PDN---CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 280 (288)
T ss_pred cCCCC------CC--CCC---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence 11100 00 111 12467788889999999999999999999987643
No 180
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.1e-33 Score=317.01 Aligned_cols=251 Identities=26% Similarity=0.336 Sum_probs=197.7
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
|+..+.||+|+||.||+|.+. +++.||+|++...... ..+.+.+|+.++++++|++|+++++++.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 677789999999999999887 5789999988643222 224567899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 82 ~~g~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 82 MNGGDLKFHIYHMG---EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred cCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 99999999886532 24588999999999999999999999 9999999999999999999999999999765422
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.. .....|+..|+|||++.+..++.++||||+|+++|||++|+.||....... ........ ... .. ..
T Consensus 156 ~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~~~~~-~~~--~~----~~ 223 (285)
T cd05630 156 QT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERL-VKE--VQ----EE 223 (285)
T ss_pred cc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHHHHhh-hhh--hh----hh
Confidence 21 234578999999999999899999999999999999999999997532111 11111110 000 00 00
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPT-----MIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~~ 1203 (1237)
.. . .....+.+++.+|++.+|++||| +.+++++
T Consensus 224 ~~--~---~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 224 YS--E---KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred cC--c---cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 11 0 11224667888999999999999 8888874
No 181
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.4e-33 Score=320.76 Aligned_cols=260 Identities=27% Similarity=0.443 Sum_probs=202.0
Q ss_pred hCCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 999 (1237)
.++|++.+.||+|+||.||+|.+. ++..||+|++..... ...+++.+|+.++++++||||+++++++..++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457889999999999999999864 367899998764322 2245688999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhc-----------------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 000889 1000 LLVYEYMKWGSLESVLHDRAK-----------------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSN 1062 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~N 1062 (1237)
++||||+++|+|.+++..... .....+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 999999999999999975421 1123578889999999999999999999 99999999999
Q ss_pred eeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCC
Q 000889 1063 VLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGD 1141 (1237)
Q Consensus 1063 Ill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~ 1141 (1237)
|+++.++.+||+|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999876543322111222345667999999998899999999999999999997 8888753221
Q ss_pred CchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1142 DNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1142 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
......... .... ..+. .....+.+++.+|++.+|++|||+.|+++.|++
T Consensus 239 ----~~~~~~~~~-~~~~-------~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 ----EEVIYYVRD-GNVL-------SCPD---NCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----HHHHHHHhc-CCCC-------CCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111111111 1100 0011 122457788899999999999999999999874
No 182
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.1e-33 Score=318.28 Aligned_cols=262 Identities=26% Similarity=0.433 Sum_probs=201.8
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CC--EEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GS--VVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 1002 (1237)
++|++.++||+|+||.||+|+.++ +. .+++|.+.... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 478899999999999999998764 32 46777765322 22345688999999999 799999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcC-----------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCce
Q 000889 1003 YEYMKWGSLESVLHDRAKG-----------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEA 1071 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~v 1071 (1237)
|||+++++|.++++..... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 9999999999999753211 123588899999999999999999999 99999999999999999999
Q ss_pred EEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHH
Q 000889 1072 RVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAK 1150 (1237)
Q Consensus 1072 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 1150 (1237)
||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||..... .....
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~------~~~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC------AELYE 229 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHH
Confidence 99999998643211 11112233557999999998889999999999999999997 9999864321 11111
Q ss_pred HHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccC
Q 000889 1151 QLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTE 1212 (1237)
Q Consensus 1151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~ 1212 (1237)
..... ..... +.. ....+.+++.+|++.+|.+|||+.++++.|+.+.....
T Consensus 230 ~~~~~------~~~~~--~~~---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 230 KLPQG------YRMEK--PRN---CDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred HHhcC------CCCCC--CCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11111 01111 111 12356788889999999999999999999988876553
No 183
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6.6e-33 Score=310.78 Aligned_cols=252 Identities=23% Similarity=0.371 Sum_probs=199.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc-----CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ-----GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
++|++.+.||+|++|.||+|... ++..||+|.+...... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46889999999999999999875 5889999987533211 23467889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
||||+++++|.+++... ..+++..+.+++.|++.|++|||+. +++||||+|+||+++.++.++|+|||+++.
T Consensus 82 v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~ 153 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 153 (263)
T ss_pred EEEECCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 99999999999998753 3578889999999999999999999 999999999999999999999999999986
Q ss_pred eccCCccee-eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1082 VNALDTHLS-VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1082 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
......... .....++..|+|||++.+..++.++||||+|+++|||++|+.||...+. ....... ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~-~~~~---- 223 (263)
T cd06625 154 LQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA-----MAAIFKI-ATQP---- 223 (263)
T ss_pred ccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch-----HHHHHHH-hccC----
Confidence 543221111 1234578899999999998899999999999999999999999864321 1111111 0000
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.....+ ......+.+++.+|+..+|++|||+.+++++
T Consensus 224 -~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 224 -TNPQLP-----SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -CCCCCC-----ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 011111 1122356678889999999999999999875
No 184
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.3e-33 Score=312.61 Aligned_cols=253 Identities=27% Similarity=0.424 Sum_probs=200.1
Q ss_pred CCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
++|++.+.||+|+||.||+|.+..+..+|+|++... ....+.+.+|++++++++|||++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC-CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 458888999999999999999887778999987542 234567889999999999999999999875 456899999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.++++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++.......
T Consensus 84 ~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 84 KGSLLDFLKEGD---GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence 999999997532 24578999999999999999999999 999999999999999999999999999986543221
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......++..|+|||+..+..++.++||||||+++|||++ |+.||..... ... ........ ..
T Consensus 158 ~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~---~~~~~~~~------~~-- 222 (260)
T cd05069 158 T-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN---REV---LEQVERGY------RM-- 222 (260)
T ss_pred c-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHH---HHHHHcCC------CC--
Confidence 1 1122345678999999988889999999999999999999 8999864321 111 11111110 00
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
... ......+.+++.+|++++|++||++.++++.|++
T Consensus 223 ~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 PCP---QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCC---cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 011 1122457788889999999999999999999875
No 185
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.9e-33 Score=324.55 Aligned_cols=241 Identities=26% Similarity=0.351 Sum_probs=190.5
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
+|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+..|.++++.+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999876 58899999886432 223345778899988885 577888999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 Ey~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~ 152 (323)
T cd05615 81 EYVNGGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 152 (323)
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccC
Confidence 999999999988653 4689999999999999999999999 99999999999999999999999999987543
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ... ......
T Consensus 153 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~---~~~i~~--------- 215 (323)
T cd05615 153 VDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DEL---FQSIME--------- 215 (323)
T ss_pred CCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---HHH---HHHHHh---------
Confidence 2211 12345689999999999988899999999999999999999999975321 111 111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTM 1197 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 1197 (1237)
.....+... ...+.+++.+|++.+|.+|++.
T Consensus 216 ~~~~~p~~~---~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 216 HNVSYPKSL---SKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCCCCCccC---CHHHHHHHHHHcccCHhhCCCC
Confidence 011111111 1345678889999999999984
No 186
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.6e-33 Score=324.28 Aligned_cols=263 Identities=27% Similarity=0.400 Sum_probs=204.9
Q ss_pred CCCCCceecccCCeEEEEEEECC--------CCEEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD--------GSVVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEE 998 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 998 (1237)
+|++.+.||+|+||.||+|++.. +..||+|.+.... ....+++.+|+++++++ +||||+++++++...+.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 58889999999999999997531 2368899776432 22345788999999999 79999999999999999
Q ss_pred EEEEEEeccCCCHHHHHhhhhc-----------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC
Q 000889 999 RLLVYEYMKWGSLESVLHDRAK-----------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE 1067 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~ 1067 (1237)
.+++|||+++|+|.+++..... .....+++..+..++.|+++|++|||+. +++||||||+||+++.
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~~ 169 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTE 169 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcC
Confidence 9999999999999999976431 1234588899999999999999999999 9999999999999999
Q ss_pred CCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHH
Q 000889 1068 NFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLV 1146 (1237)
Q Consensus 1068 ~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~ 1146 (1237)
++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.... ..
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~ 243 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------VE 243 (334)
T ss_pred CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC------HH
Confidence 99999999999986654332222222334567999999999899999999999999999998 888886432 11
Q ss_pred HHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccccc
Q 000889 1147 GWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDT 1211 (1237)
Q Consensus 1147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~ 1211 (1237)
.+......... ..... .....+.+++.+|++.+|++|||+.++++.|+++....
T Consensus 244 ~~~~~~~~~~~--------~~~~~---~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 244 ELFKLLKEGHR--------MDKPA---NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHcCCC--------CCCCC---CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11111111110 00111 12235778889999999999999999999999887544
No 187
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.8e-33 Score=319.42 Aligned_cols=250 Identities=26% Similarity=0.374 Sum_probs=201.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.+|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 57889999999999999999975 68999999887544445567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.. ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 99 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred CCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 99999999864 3578889999999999999999999 99999999999999999999999999997654322
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......+++.|+|||.+.+..++.++||||+||++|+|++|+.||........ .. .......+..
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-----~~-------~~~~~~~~~~ 235 (297)
T cd06656 170 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LY-------LIATNGTPEL 235 (297)
T ss_pred c--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-----ee-------eeccCCCCCC
Confidence 1 12345688899999999988899999999999999999999999965321110 00 0000000011
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. .......+.+++.+||+.+|++||++.+++++
T Consensus 236 ~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 236 QN---PERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01 11122345678889999999999999999985
No 188
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.7e-33 Score=324.33 Aligned_cols=193 Identities=23% Similarity=0.327 Sum_probs=165.2
Q ss_pred HHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 925 EATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 925 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
....+|++.+.||+|+||.||+|+.. ++..||+|.... .....|+.++++++||||+++++++......++||
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 34567999999999999999999987 466888886432 12356999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+. ++|.+++... ...+++..+..++.|++.||+|||+. +||||||||+||+++.++.+||+|||+++...
T Consensus 137 e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 137 PHYS-SDLYTYLTKR----SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EccC-CcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 9995 6888888653 24689999999999999999999999 99999999999999999999999999997533
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPI 1134 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~ 1134 (1237)
... ......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 209 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 209 VAP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cCc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 211 123456899999999999989999999999999999999866554
No 189
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.5e-33 Score=324.75 Aligned_cols=201 Identities=28% Similarity=0.371 Sum_probs=172.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc---cCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV---TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||+||+|+.. +++.||+|++... .....+.+.+|..+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46889999999999999999976 5889999988642 1223445788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 81 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred ecCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 999999999999653 24688999999999999999999999 99999999999999999999999999997654
Q ss_pred cCCcceeeeccccCCCcCCccccCc-----cccCcccchHHHHHHHHHHHcCCCCCCC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQS-----FRCTTKGDVYSYGVILLELLSGKRPIDP 1136 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGv~l~el~tg~~p~~~ 1136 (1237)
..... ......||+.|||||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 154 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 154 ADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred CCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 32221 1223468999999999863 4578899999999999999999999964
No 190
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.1e-33 Score=320.07 Aligned_cols=261 Identities=27% Similarity=0.459 Sum_probs=200.7
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CC--EEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GS--VVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 1002 (1237)
++|++.+.||+|+||.||+|+++. +. .+|+|++.... ....+.+.+|++++.++ +||||+++++++..++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 468888999999999999999763 43 45777665322 22345688899999999 899999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhc-----------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCce
Q 000889 1003 YEYMKWGSLESVLHDRAK-----------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEA 1071 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~v 1071 (1237)
|||+++++|.++++.... .....+++..++.++.|+++|++|||+. +++||||||+||+++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999976431 1123578999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHH
Q 000889 1072 RVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAK 1150 (1237)
Q Consensus 1072 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 1150 (1237)
||+|||+++..... .......++..|+|||++.+..++.++|||||||++|||++ |..||...... ....
T Consensus 164 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~ 234 (303)
T cd05088 164 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYE 234 (303)
T ss_pred EeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH------HHHH
Confidence 99999998633211 11112234667999999988889999999999999999998 99998643211 1111
Q ss_pred HHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccccc
Q 000889 1151 QLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDT 1211 (1237)
Q Consensus 1151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~ 1211 (1237)
..... ..... ... ....+.+++.+|++.+|++||++.++++.++++....
T Consensus 235 ~~~~~------~~~~~--~~~---~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 235 KLPQG------YRLEK--PLN---CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred HHhcC------CcCCC--CCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11110 01111 111 1234678888999999999999999999998775544
No 191
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2e-33 Score=318.38 Aligned_cols=251 Identities=23% Similarity=0.372 Sum_probs=196.2
Q ss_pred CCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 930 FSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
|++.+.||+|+||.||+|++.. +..+++|.+........+.+.+|+++++.++||||+++++++..+...++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 5667889999999999999874 667788877544434456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
++|..++... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+|++|||++.......
T Consensus 87 ~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-- 157 (282)
T cd06643 87 GAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-- 157 (282)
T ss_pred CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc--
Confidence 9999987653 24689999999999999999999999 99999999999999999999999999987543221
Q ss_pred eeeeccccCCCcCCccccC-----ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQ-----SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.......+++.|+|||++. +..++.++||||+||++|||++|+.||.... ....... ..... .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~~~-~~~~~------~ 225 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN-----PMRVLLK-IAKSE------P 225 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC-----HHHHHHH-HhhcC------C
Confidence 1223456889999999984 4457789999999999999999999986422 1111111 10000 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
+....+. .....+.+++.+||+.+|++||++.+++++-
T Consensus 226 ~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 226 PTLAQPS---RWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred CCCCCcc---ccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 1111111 1123567888899999999999999988664
No 192
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.2e-33 Score=326.74 Aligned_cols=240 Identities=24% Similarity=0.321 Sum_probs=186.0
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHH-HHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEME-TIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+.||+|+||+||+|++. +++.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999987 46789999886422 122234444444 56788999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++... ..+.+..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-- 150 (325)
T cd05602 81 GELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-- 150 (325)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--
Confidence 9999998753 3577888889999999999999999 99999999999999999999999999997543211
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
.......||+.|||||++.+..++.++||||+||++|||++|+.||..... .......... ....
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~---------~~~~ 215 (325)
T cd05602 151 GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILNK---------PLQL 215 (325)
T ss_pred CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH------HHHHHHHHhC---------CcCC
Confidence 122456799999999999998999999999999999999999999974321 1111111111 1111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMIQVM 1201 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell 1201 (1237)
.... ...+.+++.+|++.+|.+||++.+.+
T Consensus 216 ~~~~---~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 216 KPNI---TNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCC---CHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 1111 22456788899999999999987443
No 193
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.4e-33 Score=312.79 Aligned_cols=255 Identities=27% Similarity=0.463 Sum_probs=204.7
Q ss_pred hCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.++|++.+.||+|+||.||+|..+++..||+|.+... ....+++.+|+.++++++||||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 4578899999999999999999888888999987643 344578999999999999999999999999888999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.... +..+++..+..++.+++.|++|||+. +++|+||||+||+++.++.+|++|||.++......
T Consensus 84 ~~~~L~~~i~~~~---~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 84 SKGSLLDFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred CCCCHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 9999999997642 24689999999999999999999999 99999999999999999999999999998664321
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.. ......++..|+|||.+.+..++.++||||+|+++||+++ |+.||.... .. .......... .
T Consensus 158 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~---~~---~~~~~~~~~~--------~ 222 (261)
T cd05034 158 YT-AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT---NR---EVLEQVERGY--------R 222 (261)
T ss_pred hh-hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC---HH---HHHHHHHcCC--------C
Confidence 11 1122234568999999998889999999999999999998 999986432 11 1111111110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
...+... ...+.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ~~~~~~~---~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MPRPPNC---PEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCC---CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0111111 2356788889999999999999999999875
No 194
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-34 Score=309.25 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=208.4
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.+-|.+.+.||+|.|++|-+|++- +|+.||||++.+.... ...++..|++.|+-++|||||++|++.......|+|+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 345788889999999999999864 7999999999765433 3457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee-CCCCceEEeecccceee
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLL-DENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll-~~~~~vkl~DfGla~~~ 1082 (1237)
|.-++|+|.+|+.+.. ..+.+.-+.+++.||+.|+.|+|+. .|||||+||+||.+ .+-|-||+.|||++-.+
T Consensus 97 ELGD~GDl~DyImKHe----~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHE----EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred EecCCchHHHHHHhhh----ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccC
Confidence 9999999999998764 4688999999999999999999999 99999999999876 46789999999999776
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccC-cccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCT-TKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
.+.. +..+.||...|-|||.+.+..|+ +++||||+|||+|-+++|+.||..... .+.+..|
T Consensus 170 ~PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND---------------SETLTmI 231 (864)
T KOG4717|consen 170 QPGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND---------------SETLTMI 231 (864)
T ss_pred CCcc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc---------------hhhhhhh
Confidence 5433 45778999999999999998886 579999999999999999999975331 2233344
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+|-.+..+.... .+..++|..|+..||.+|.+..+++..
T Consensus 232 mDCKYtvPshvS---~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 232 MDCKYTVPSHVS---KECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred hcccccCchhhh---HHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 554444433333 456678889999999999999999865
No 195
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-33 Score=319.56 Aligned_cols=250 Identities=27% Similarity=0.402 Sum_probs=202.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.+|++.+.||.|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 35888899999999999999875 68899999887555455667889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.. ..+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 99 AGGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred CCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 99999998864 3578999999999999999999999 99999999999999999999999999987654322
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......++..|+|||.+.+..++.++|||||||++|+|++|+.||..... ...... .... . .+.+
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~-----~~~~~~-~~~~-~-----~~~~ 235 (296)
T cd06655 170 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----LRALYL-IATN-G-----TPEL 235 (296)
T ss_pred c--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH-HHhc-C-----Cccc
Confidence 2 12345688899999999988899999999999999999999999965321 111110 0000 0 0011
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..... ....+.+++.+||..+|++||++.+++++
T Consensus 236 ~~~~~---~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 236 QNPEK---LSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CCccc---CCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 11111 12346678889999999999999999976
No 196
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.6e-33 Score=320.32 Aligned_cols=262 Identities=24% Similarity=0.352 Sum_probs=199.4
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.+.||+|+||.||+|++. ++..+|+|.+..... ....++.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36889999999999999999876 467788887753221 2234588899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.++++.. ..+++..+..++.|+++||+|||+.+ +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 81 MDGGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999999753 46788999999999999999999742 8999999999999999999999999998754322
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhc---------
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREK--------- 1156 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 1156 (1237)
. .....++..|+|||++.+..++.++||||||+++|||++|+.||...... ....+........
T Consensus 154 ~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 154 M----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK---ELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred c----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh---hHHHhhcCccccccccCCcccc
Confidence 1 23457889999999998888999999999999999999999998643211 1111000000000
Q ss_pred ---------------ccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1157 ---------------RINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1157 ---------------~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
....+.....+. ........++.+++.+|++.+|++|||+.+++++-
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPK-LPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCcc-CcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000000000000 00001223577889999999999999999999884
No 197
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.8e-33 Score=327.38 Aligned_cols=198 Identities=27% Similarity=0.360 Sum_probs=167.4
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCC-----
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE----- 997 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 997 (1237)
..++|++.+.||+|+||.||+|++. .+..||+|++.... ......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3468999999999999999999876 58899999986432 223456788999999999999999999886443
Q ss_pred -eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 998 -ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 998 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecC
Confidence 57999999974 56666532 478888899999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCC
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
|+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 168 g~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 168 GLARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred CCccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 999754321 1123457899999999999999999999999999999999999999753
No 198
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.2e-33 Score=329.54 Aligned_cols=263 Identities=25% Similarity=0.318 Sum_probs=196.0
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCC-----eEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE-----ERL 1000 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 1000 (1237)
+|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999975 68899999886432 123456889999999999999999999998776 789
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccce
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1080 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~ 1080 (1237)
+||||+. ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~l~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP-----QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEeeccc-cCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecccccee
Confidence 9999997 6788877542 4689999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHH--------
Q 000889 1081 LVNALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQ-------- 1151 (1237)
Q Consensus 1081 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-------- 1151 (1237)
....... .......+++.|+|||++.+. .++.++||||+||++|||++|+.||....... .+......
T Consensus 152 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 152 VEEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ--QLDLITDLLGTPSLEA 228 (372)
T ss_pred ecccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCCCCHHH
Confidence 6543222 122345678999999998774 47899999999999999999999997543211 00000000
Q ss_pred ----H--hhhcccccccCcc-ccCC-CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1152 ----L--HREKRINEILDPE-LTMQ-TSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1152 ----~--~~~~~~~~~~~~~-l~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. ...........+. .... ........++.+++.+|++.||++|||+.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0 0000000000000 0000 0000112356788889999999999999999986
No 199
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.4e-33 Score=311.93 Aligned_cols=247 Identities=23% Similarity=0.393 Sum_probs=193.2
Q ss_pred eecccCCeEEEEEEEC---CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 935 MIGSGGFGEVYKAQLR---DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
.||+|+||.||+|.++ ++..+|+|++..... ...+++.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999763 467899998753322 22456889999999999999999999875 56779999999999
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcce
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHL 1089 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~ 1089 (1237)
+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 81 PLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 999998653 3688999999999999999999999 99999999999999999999999999998665433221
Q ss_pred e-eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1090 S-VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1090 ~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
. .....++..|+|||.+....++.++|||||||++|||++ |+.||..... .. +......... +..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~---~~~~i~~~~~------~~~- 219 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG---NE---VTQMIESGER------MEC- 219 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HH---HHHHHHCCCC------CCC-
Confidence 1 122234578999999988889999999999999999998 9999864321 11 1111111110 111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
+.. ...++.+++.+||+.+|++||++.+|++.|++.
T Consensus 220 -~~~---~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 -PQR---CPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred -CCC---CCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 111 123566888899999999999999999999864
No 200
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.6e-33 Score=325.27 Aligned_cols=237 Identities=26% Similarity=0.351 Sum_probs=185.3
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHH-HHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEME-TIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
++||+|+||.||+|++. +++.||+|++.... ......+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999986 57889999886432 122334555554 57889999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|..++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 150 (321)
T cd05603 81 GELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-- 150 (321)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--
Confidence 9998888643 4678888899999999999999999 99999999999999999999999999987532211
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ......... ......
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~---------~~~~~~ 215 (321)
T cd05603 151 ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD------VSQMYDNIL---------HKPLQL 215 (321)
T ss_pred CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC------HHHHHHHHh---------cCCCCC
Confidence 12234678999999999998889999999999999999999999996432 111111111 111111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMI 1198 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 1198 (1237)
+... ...+.+++.+|++.+|.+||++.
T Consensus 216 ~~~~---~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 PGGK---TVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCC---CHHHHHHHHHHccCCHhhcCCCC
Confidence 1111 23466788899999999999764
No 201
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9.8e-33 Score=308.90 Aligned_cols=252 Identities=29% Similarity=0.443 Sum_probs=202.2
Q ss_pred ceecccCCeEEEEEEECC----CCEEEEEEeccccCcC-HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLRD----GSVVAIKKLIHVTGQG-DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+.||+|+||.||+|.... +..|++|.+....... .+.+.+|++++++++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999999864 7789999887543332 56788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhhcC----CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1009 GSLESVLHDRAKG----GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1009 gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
++|.+++...... ....+++..++.++.|+++|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999875211 125789999999999999999999999 999999999999999999999999999987765
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
...........++..|+|||.+....++.++||||+|+++|||++ |..||.... ............
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~~~------- 224 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS------NEEVLEYLRKGY------- 224 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHcCC-------
Confidence 432223344567889999999988889999999999999999999 699987542 111111111110
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
....+ .....++.+++.+|+..+|++|||+.+++++|+
T Consensus 225 -~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 -RLPKP---EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -CCCCC---ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00011 111346778888999999999999999999874
No 202
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.5e-33 Score=313.09 Aligned_cols=256 Identities=25% Similarity=0.456 Sum_probs=201.1
Q ss_pred CCCCCCceecccCCeEEEEEEECC-C---CEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-G---SVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
++|+..+.||+|+||.||+|+... + ..+|+|++.... ....+.+..|++++++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 467788999999999999998763 3 268888875432 22345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++...
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 85 TEYMENGALDKYLRDH----DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999998653 24689999999999999999999999 9999999999999999999999999999866
Q ss_pred ccCCcceee-eccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1083 NALDTHLSV-STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1083 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
......... .....+..|+|||++.+..++.++|||||||++|||++ |+.||..... . .+.........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~---~~~~~i~~~~~--- 228 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---H---EVMKAINDGFR--- 228 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---H---HHHHHHhcCCC---
Confidence 543222111 11223457999999988889999999999999999997 9999864321 1 11111111100
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
.+.. ......+.+++.+||+.+|++||++.++++.|+++
T Consensus 229 -----~~~~---~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 -----LPAP---MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -----CCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0001 11224567889999999999999999999999875
No 203
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.4e-33 Score=310.83 Aligned_cols=250 Identities=27% Similarity=0.415 Sum_probs=202.3
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
++|+..+.||+|+||.||+|+..+ +..+++|.+..... .+++.+|++++++++||||+++++++......+++|||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578889999999999999999875 78899998864322 668999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.... ..+++..+..++.|+++|+.|||+. +++||||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 81 GAGSVSDIMKITN----KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred CCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 9999999986532 4689999999999999999999999 99999999999999999999999999998664332
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......++..|+|||++.+..++.++||||||+++|+|++|+.||....... .... ......+..
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~-----~~~~-------~~~~~~~~~ 219 (256)
T cd06612 154 A--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR-----AIFM-------IPNKPPPTL 219 (256)
T ss_pred c--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh-----hhhh-------hccCCCCCC
Confidence 1 1234557889999999998899999999999999999999999987432110 0000 000001111
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. .......+.+++.+|++.+|++|||+.+++++
T Consensus 220 ~~---~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 220 SD---PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred Cc---hhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 11 11122457788899999999999999999863
No 204
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.3e-33 Score=314.65 Aligned_cols=251 Identities=24% Similarity=0.324 Sum_probs=196.7
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
|+..+.||+|+||+||+|.+. +++.||+|++..... .....+.+|++++++++|++|+++++++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999886 588999998854321 2234577899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 82 MNGGDLKFHIYNMG---NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred ccCccHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence 99999998886532 23689999999999999999999999 9999999999999999999999999999765432
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.. .....|+..|+|||++.+..++.++|+||+|+++|||++|+.||...... .....+..... . .....
T Consensus 156 ~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~--~~~~~~~~~~~-~--~~~~~--- 224 (285)
T cd05632 156 ES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK--VKREEVDRRVL-E--TEEVY--- 224 (285)
T ss_pred Cc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhhh-c--ccccc---
Confidence 21 23457899999999999888999999999999999999999999743211 00111111000 0 00001
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPT-----MIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~~ 1203 (1237)
.. .....+.+++.+|++.+|++||+ +.+++++
T Consensus 225 ---~~---~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 225 ---SA---KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ---Cc---cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 11 11224567888999999999999 6677765
No 205
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.3e-33 Score=317.44 Aligned_cols=252 Identities=23% Similarity=0.371 Sum_probs=198.6
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
+.|++.++||+|+||.||+|++.. +..+++|.+........+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 568889999999999999999874 7889999886544444567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|..++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 92 PGGAVDAIMLELD----RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred CCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 9999998876532 3589999999999999999999999 99999999999999999999999999987543221
Q ss_pred cceeeeccccCCCcCCccccC-----ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQ-----SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
.......+++.|+|||++. ...++.++|||||||++|||++|+.||..... ... .......
T Consensus 165 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~-~~~~~~~------ 230 (292)
T cd06644 165 --QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRV-LLKIAKS------ 230 (292)
T ss_pred --cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHH-HHHHhcC------
Confidence 1123456888999999984 34567899999999999999999999864221 111 1111100
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+.... ......++.+++.+||+.+|++||++.+++++
T Consensus 231 ~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 231 EPPTLSQ---PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCccCCC---CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0111111 11122356788889999999999999999864
No 206
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.5e-33 Score=313.68 Aligned_cols=239 Identities=21% Similarity=0.349 Sum_probs=186.4
Q ss_pred ceecccCCeEEEEEEECC-------------CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEE
Q 000889 934 SMIGSGGFGEVYKAQLRD-------------GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 1000 (1237)
+.||+|+||.||+|+... ...|++|.+..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998542 2257888765443344456888999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCc-------eEE
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFE-------ARV 1073 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~-------vkl 1073 (1237)
+||||+++|+|..++... ...+++..+.+++.|+++|++|||+. +|+||||||+||+++.++. +|+
T Consensus 81 lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK----SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEecccCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 999999999999988653 24689999999999999999999999 9999999999999986654 899
Q ss_pred eecccceeeccCCcceeeeccccCCCcCCccccC-ccccCcccchHHHHHHHHHHH-cCCCCCCCCCCCCCchHHHHHHH
Q 000889 1074 SDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQ-SFRCTTKGDVYSYGVILLELL-SGKRPIDPSEFGDDNNLVGWAKQ 1151 (1237)
Q Consensus 1074 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~-tg~~p~~~~~~~~~~~~~~~~~~ 1151 (1237)
+|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ .|..||......+ ...
T Consensus 154 ~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------~~~- 220 (262)
T cd05077 154 SDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE------KER- 220 (262)
T ss_pred CCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH------HHH-
Confidence 999998754321 2345788999999886 466889999999999999998 5888876432111 000
Q ss_pred HhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1152 LHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1152 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
... . ...... +....+.+++.+||+.||++||++.++++++
T Consensus 221 ~~~-~--------~~~~~~---~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 221 FYE-G--------QCMLVT---PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHh-c--------CccCCC---CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 0 000001 1123567888999999999999999999876
No 207
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=6.8e-33 Score=309.32 Aligned_cols=250 Identities=28% Similarity=0.476 Sum_probs=202.8
Q ss_pred CCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
++|++.+.||+|+||.||+|... ++.||+|++..... ..+++.+|+.++++++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 46888899999999999999886 78899999875433 45678999999999999999999999998999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++......
T Consensus 84 ~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~- 156 (256)
T cd05039 84 KGSLVDYLRSRGR---AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ- 156 (256)
T ss_pred CCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc-
Confidence 9999999976432 3689999999999999999999999 99999999999999999999999999998653211
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
.....+..|+|||++.+..++.++||||+|+++|||++ |+.||..... ... ........ ....
T Consensus 157 ----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~---~~~~~~~~------~~~~ 220 (256)
T cd05039 157 ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDV---VPHVEKGY------RMEA 220 (256)
T ss_pred ----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HHH---HHHHhcCC------CCCC
Confidence 12334668999999988889999999999999999997 9999864321 111 11111110 0000
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
.. .....+.+++.+|+..+|++|||+.+++++|+.+
T Consensus 221 --~~---~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 221 --PE---GCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred --cc---CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 11 1124567888899999999999999999999764
No 208
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.3e-33 Score=326.36 Aligned_cols=238 Identities=26% Similarity=0.358 Sum_probs=185.9
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHH-HHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEME-TIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+.||+|+||.||+|+.. +++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999876 588999998864321 22234555554 46778999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~- 151 (325)
T cd05604 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD- 151 (325)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC-
Confidence 9999888653 4688999999999999999999999 999999999999999999999999999875322111
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
......|++.|||||++.+..++.++||||+||++|||++|+.||..... ......... .....
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~------~~~~~~~~~---------~~~~~ 215 (325)
T cd05604 152 -TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV------AEMYDNILH---------KPLVL 215 (325)
T ss_pred -CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH------HHHHHHHHc---------CCccC
Confidence 22346799999999999998999999999999999999999999964321 111111111 11111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMIQ 1199 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 1199 (1237)
... ....+.+++.+|++.+|.+||++.+
T Consensus 216 ~~~---~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 216 RPG---ASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred CCC---CCHHHHHHHHHHhccCHHhcCCCCC
Confidence 111 1234567888999999999998753
No 209
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=298.15 Aligned_cols=271 Identities=20% Similarity=0.280 Sum_probs=219.2
Q ss_pred HHHHHHHhCCCCCCceecccCCeEEEEEEECC------CCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccce
Q 000889 920 FAHLLEATNGFSADSMIGSGGFGEVYKAQLRD------GSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGY 992 (1237)
Q Consensus 920 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~ 992 (1237)
..++.....+++...++.+|.||+||.|.+.+ .+.|.||.++... .-+...+..|...+..+.|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 34555566778889999999999999997653 3456677665322 2234467889999999999999999998
Q ss_pred EEe-CCeEEEEEEeccCCCHHHHHhhhhc---CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC
Q 000889 993 CKI-GEERLLVYEYMKWGSLESVLHDRAK---GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN 1068 (1237)
Q Consensus 993 ~~~-~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~ 1068 (1237)
+.+ .+..+.+|.++..|+|..|++..+. ...+.++..+...++.|++.|++|||+. +|||.||.++|.+||+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhh
Confidence 865 4567889999999999999984331 2245677888899999999999999999 99999999999999999
Q ss_pred CceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHH
Q 000889 1069 FEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVG 1147 (1237)
Q Consensus 1069 ~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~ 1147 (1237)
.+|||+|=.+++..-+.+.+.-......+..||+||.+....|+.++|||||||++|||+| |+.||.. .+...
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae------IDPfE 506 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE------IDPFE 506 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc------cCHHH
Confidence 9999999999999988888877777778889999999999999999999999999999998 8999753 22333
Q ss_pred HHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccc
Q 000889 1148 WAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVD 1210 (1237)
Q Consensus 1148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~ 1210 (1237)
+......+.++. .+..+++ ++..++.-||+.+|++||++++++..|.++...
T Consensus 507 m~~ylkdGyRla--------QP~NCPD---eLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 507 MEHYLKDGYRLA--------QPFNCPD---ELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred HHHHHhccceec--------CCCCCcH---HHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 444444444433 3334554 456777789999999999999999999987653
No 210
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.9e-34 Score=332.30 Aligned_cols=202 Identities=25% Similarity=0.385 Sum_probs=174.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++.+++||+|+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999886 58899999886422 223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 81 EFLPGGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred eCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence 999999999998753 4688999999999999999999999 99999999999999999999999999987543
Q ss_pred cCCcc---------------------------------eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcC
Q 000889 1084 ALDTH---------------------------------LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSG 1130 (1237)
Q Consensus 1084 ~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg 1130 (1237)
..... ......+||+.|+|||++.+..++.++||||+||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG 232 (360)
T cd05627 153 KAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (360)
T ss_pred cccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence 21100 001235799999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 000889 1131 KRPIDPS 1137 (1237)
Q Consensus 1131 ~~p~~~~ 1137 (1237)
+.||...
T Consensus 233 ~~Pf~~~ 239 (360)
T cd05627 233 YPPFCSE 239 (360)
T ss_pred CCCCCCC
Confidence 9999753
No 211
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.5e-33 Score=312.54 Aligned_cols=252 Identities=25% Similarity=0.407 Sum_probs=198.7
Q ss_pred CCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCc------CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQ------GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
+|+..+.||+|+||+||+|...+++.+|+|.+...... ....+.+|++++++++|+||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47888999999999999999888999999987643211 124578899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++...
T Consensus 81 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 81 MEFVPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 9999999999999653 3578899999999999999999999 9999999999999999999999999998755
Q ss_pred ccCCc----ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1083 NALDT----HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1083 ~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
..... ........|+..|+|||++.+..++.++||||+|+++|||++|+.||..... ..............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~ 227 (265)
T cd06631 153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-----LAAMFYIGAHRGLM 227 (265)
T ss_pred hhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-----HHHHHHhhhccCCC
Confidence 32111 1112335688999999999988899999999999999999999999964321 11111100000111
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+..+ . .....+.+++.+|++.+|++||++.+++++
T Consensus 228 -----~~~~--~---~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 228 -----PRLP--D---SFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred -----CCCC--C---CCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1111 1 122356778889999999999999998763
No 212
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=297.05 Aligned_cols=249 Identities=23% Similarity=0.323 Sum_probs=198.4
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
-++|...++||+|.||.|-+++-+ .++.+|+|.+++...- ...+-..|-++++..+||.+..+...|+..++.|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 356888899999999999999876 6889999988754322 233456799999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+.||.|.-++... ..+++...+.+...|+.||.|||++ +||+||+|.+|.|+|++|++||+|||+++.-
T Consensus 247 MeyanGGeLf~HLsre-----r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred EEEccCceEeeehhhh-----hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc
Confidence 9999999999888753 4688888899999999999999999 9999999999999999999999999999743
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
- .......++||||.|.|||++....|+.++|+|.+||+||||++|+.||.... ...+.. -|.
T Consensus 319 I--~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d---h~kLFe------------LIl 381 (516)
T KOG0690|consen 319 I--KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD---HEKLFE------------LIL 381 (516)
T ss_pred c--cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc---hhHHHH------------HHH
Confidence 2 23344578999999999999999999999999999999999999999997432 111111 111
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
-.++..+..-.++. ..+....+.+||.+|. ++.|+.++
T Consensus 382 ~ed~kFPr~ls~eA---ktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 382 MEDLKFPRTLSPEA---KTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred hhhccCCccCCHHH---HHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 11111121122232 2445578899999996 46666655
No 213
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.6e-33 Score=311.74 Aligned_cols=249 Identities=24% Similarity=0.383 Sum_probs=197.3
Q ss_pred ceecccCCeEEEEEEECC--C--CEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLRD--G--SVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
++||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|++++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998753 2 2689998875444 445678899999999999999999999987 889999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
++|.+++..... ..+++..++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 80 GSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 999999976532 4689999999999999999999999 9999999999999999999999999999876543322
Q ss_pred ee-eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1089 LS-VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1089 ~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
.. .....++..|+|||++.+..++.++|||||||++|||++ |+.||..... .. ......... ...
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~---~~~~~~~~~-------~~~ 220 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG---SQ---ILKKIDKEG-------ERL 220 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HH---HHHHHHhcC-------CcC
Confidence 11 123456789999999998899999999999999999998 9999863221 11 111111100 011
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
.... .....+.+++.+|++.+|++||++.++++.|.
T Consensus 221 ~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ERPE---ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCCc---cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 1111 12245778888999999999999999999875
No 214
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6e-33 Score=312.22 Aligned_cols=255 Identities=24% Similarity=0.450 Sum_probs=199.3
Q ss_pred CCCCCceecccCCeEEEEEEECC-C---CEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD-G---SVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.|++.+.||+|+||.||+|++.. + ..||+|++.... ....++|..|+.++++++||||+++++++..+...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 47788999999999999998763 3 359999876432 223457899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++++|.+++... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++...
T Consensus 85 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 85 EFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred ecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 999999999998753 24688999999999999999999999 99999999999999999999999999987654
Q ss_pred cCCcceeeeccc---cCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccc
Q 000889 1084 ALDTHLSVSTLA---GTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRIN 1159 (1237)
Q Consensus 1084 ~~~~~~~~~~~~---gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1159 (1237)
............ .+..|+|||++.+..++.++||||+||++|||++ |..||..... .....+. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~---~~~~~~i---~~~~--- 228 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVINAI---EQDY--- 228 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH---HHHHHHH---HcCC---
Confidence 322211111111 2357999999998899999999999999999886 9999864321 1111111 1110
Q ss_pred cccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1160 EILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1160 ~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
..+.... ....+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 229 -----~~~~~~~---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 -----RLPPPMD---CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -----cCCCccc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111111 123467888899999999999999999998865
No 215
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.8e-33 Score=309.35 Aligned_cols=249 Identities=26% Similarity=0.415 Sum_probs=198.2
Q ss_pred CCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEE-eCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCK-IGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 1006 (1237)
.+|++.+.||+|+||.||+|... +..||+|..... ...+.+.+|+.++++++|+|++++++++. .++..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 36888899999999999999876 778999987532 33567889999999999999999999764 456789999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.++++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 83 AKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred CCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 9999999987642 23588999999999999999999999 99999999999999999999999999997554322
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
....++..|+|||++.+..++.++||||||+++|||++ |+.||.... ............ .+.
T Consensus 157 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~~~~~------~~~ 219 (256)
T cd05082 157 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPRVEKGY------KMD 219 (256)
T ss_pred -----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhcCC------CCC
Confidence 22344668999999998889999999999999999997 999986322 111111111110 011
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
. . ......+.+++.+|++.+|++|||+.++++.|+++
T Consensus 220 ~--~---~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 220 A--P---DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred C--C---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 1 0 11223567888899999999999999999998764
No 216
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.5e-33 Score=316.75 Aligned_cols=261 Identities=23% Similarity=0.369 Sum_probs=200.0
Q ss_pred CCCCCceecccCCeEEEEEEEC-----CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-----DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EERL 1000 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 1000 (1237)
.|++.+.||+|+||.||+|++. ++..||+|.+.... ......+.+|++++++++||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 4678899999999999999752 47789999886432 22345788999999999999999999998765 5689
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccce
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1080 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~ 1080 (1237)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 85 lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK----NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEccCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 9999999999999986532 3589999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcce-eeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCC---------CCCchHHHHHH
Q 000889 1081 LVNALDTHL-SVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEF---------GDDNNLVGWAK 1150 (1237)
Q Consensus 1081 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~---------~~~~~~~~~~~ 1150 (1237)
......... ......++..|+|||++.+..++.++||||||+++|||++++.|+..... ...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 664432221 11234567789999999888899999999999999999998776432110 00001111111
Q ss_pred HHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1151 QLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
...... ..+... .....+.+++.+|++.+|++|||+.++++.++.+
T Consensus 238 ~~~~~~--------~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGK--------RLPRPP---NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCc--------cCCCCC---CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111000 011111 1234677899999999999999999999999875
No 217
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.3e-33 Score=317.60 Aligned_cols=252 Identities=25% Similarity=0.379 Sum_probs=199.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
++|++.+.||+|+||.||+|++. ++..+|+|.+........+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 46888899999999999999986 57889999886544444567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~L~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 85 DGGALDSIMLELE----RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred CCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 9999999987642 4689999999999999999999999 99999999999999999999999999987543322
Q ss_pred cceeeeccccCCCcCCccccC-----ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQ-----SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
. ......+++.|+|||++. ...++.++||||+|+++|||++|+.||..... . .........
T Consensus 158 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----~-~~~~~~~~~------ 223 (280)
T cd06611 158 Q--KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----M-RVLLKILKS------ 223 (280)
T ss_pred c--ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----H-HHHHHHhcC------
Confidence 1 223456889999999974 34567899999999999999999999864321 1 111111110
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+.+..+ ......+.+++.+||+.+|.+||++.+++++
T Consensus 224 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 224 EPPTLDQP---SKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCCCcCCc---ccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00111111 1112356678889999999999999999876
No 218
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.7e-33 Score=315.59 Aligned_cols=253 Identities=27% Similarity=0.420 Sum_probs=197.6
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEEeC------C
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCKIG------E 997 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------~ 997 (1237)
+.+.|++.+.||+|+||.||+|+.. +++.||+|++... ......+..|+.+++++ +||||+++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 4567888899999999999999876 4778899987543 34456788999999998 699999999998753 4
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
..++||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCC
Confidence 6799999999999999987632 24688999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccC-----ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHH
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQ-----SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQL 1152 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1152 (1237)
+++....... ......|++.|+|||++. +..++.++||||+||++|||++|+.||..... .......
T Consensus 157 ~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~-----~~~~~~~- 228 (272)
T cd06637 157 VSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-----MRALFLI- 228 (272)
T ss_pred Cceecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-----HHHHHHH-
Confidence 9986543221 223467899999999986 34578899999999999999999999864221 1111110
Q ss_pred hhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1153 HREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1153 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.... ...... ......+.+++.+||..+|.+|||+.+++++
T Consensus 229 -~~~~-----~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 229 -PRNP-----APRLKS----KKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred -hcCC-----CCCCCC----CCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 0000 111110 1112356788889999999999999999864
No 219
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.1e-32 Score=311.96 Aligned_cols=260 Identities=25% Similarity=0.409 Sum_probs=204.1
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CC----EEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GS----VVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
.+|++.+.||+|+||.||+|.+++ ++ .+|+|....... .....+.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 467888999999999999998753 32 588887754332 234568899999999999999999999876 78899
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 86 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK----DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEecCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 999999999999987542 3589999999999999999999998 999999999999999999999999999987
Q ss_pred eccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
..............++..|+|||.+....++.++||||||+++||+++ |+.||..... ..+.........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~~~~--- 229 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA------VEIPDLLEKGER--- 229 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHHhCCCC---
Confidence 654333222222334568999999988889999999999999999998 9999864321 111111111110
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccC
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTE 1212 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~ 1212 (1237)
...+.. ....+.+++.+||..+|.+||++.++++.|.++..++.
T Consensus 230 -----~~~~~~---~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 230 -----LPQPPI---CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred -----CCCCCC---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 011111 11356678889999999999999999999999877554
No 220
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.3e-33 Score=313.96 Aligned_cols=253 Identities=25% Similarity=0.352 Sum_probs=197.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
++|++.+.||+|+||.||+|+.. +++.||+|.+..........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 35777788999999999999876 57889999886544444456788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++... ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 89 GGGSLQDIYHVT-----GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI 160 (267)
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence 999999998653 4688999999999999999999999 99999999999999999999999999997654321
Q ss_pred cceeeeccccCCCcCCccccC---ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQ---SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.......|+..|+|||++. ...++.++||||+||++|||++|+.||....... .... .. .... ..
T Consensus 161 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~--~~~~----~~-~~~~---~~ 228 (267)
T cd06645 161 --AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR--ALFL----MT-KSNF---QP 228 (267)
T ss_pred --cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh--hHHh----hh-ccCC---CC
Confidence 1223457899999999974 4458889999999999999999999985432110 0000 00 0000 00
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+...... .....+.+++.+|++.+|++||++.+++++
T Consensus 229 ~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 229 PKLKDKM---KWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CcccccC---CCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 1110000 112346678889999999999999998864
No 221
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.5e-33 Score=310.62 Aligned_cols=256 Identities=26% Similarity=0.451 Sum_probs=200.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-C---CCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-D---GSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
++|++.+.||+|+||.||+|++. + +..+|+|.+.... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888899999999999999874 2 3378998875422 22345788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++...
T Consensus 84 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 84 TEYMENGSLDAFLRKHD----GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 99999999999997532 4679999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCccee-eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1083 NALDTHLS-VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1083 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
........ .....++..|+|||++.+..++.++||||||+++||+++ |+.||..... .... ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~---~~~~---~~~~~~~~--- 227 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN---QDVI---KAIEEGYR--- 227 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH---HHHH---HHHhCCCc---
Confidence 54332211 112223568999999998889999999999999999886 9999864321 1111 11111100
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
.+.... ....+.+++.+|++.+|++||++.++++.|+++
T Consensus 228 -----~~~~~~---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 -----LPAPMD---CPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -----CCCCCC---CCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111111 123567888899999999999999999999874
No 222
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.4e-33 Score=310.30 Aligned_cols=254 Identities=25% Similarity=0.447 Sum_probs=201.6
Q ss_pred hCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.++|++.+.||+|+||.||+|.+.++..+|+|.+... ....+.+.+|++++++++|+||+++++++.. ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 3578889999999999999999887888999987542 2334678899999999999999999999877 7789999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 83 AKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred CCCcHHHHHHhCC---ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 9999999997642 24678889999999999999999999 99999999999999999999999999997654322
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.. ......++..|+|||++.+..++.++|+|||||++|++++ |+.||..... ..... .......
T Consensus 157 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~---~~~~~~~-------- 221 (260)
T cd05073 157 YT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---PEVIR---ALERGYR-------- 221 (260)
T ss_pred cc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH---HHHHH---HHhCCCC--------
Confidence 11 1123345678999999998889999999999999999998 8999864321 11111 1111100
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
.... ......+.+++.+|++++|++||++.++.+.|+.
T Consensus 222 ~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 MPRP---ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCc---ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0001 1122457788889999999999999999999875
No 223
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1e-32 Score=307.67 Aligned_cols=250 Identities=24% Similarity=0.396 Sum_probs=200.4
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc-cCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV-TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
+|++.+.||+|+||.||++++. ++..+|+|.+... .....+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788899999999999999986 5888999987532 2233456788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++|+|.+++.... +..+++..+..++.|++.|+.|||+. +|+|+||||+||++++++.++++|||.++......
T Consensus 81 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 81 DGGDLMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred CCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 9999999886532 24678899999999999999999999 99999999999999999999999999998664322
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......... .... ..
T Consensus 155 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~~~~~~~-~~~~-----~~ 220 (255)
T cd08219 155 A--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW------KNLILKVCQ-GSYK-----PL 220 (255)
T ss_pred c--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH------HHHHHHHhc-CCCC-----CC
Confidence 2 12345688899999999988899999999999999999999999974321 111111111 1100 01
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+ ......+.+++.+||+.+|++|||+.+++..
T Consensus 221 --~---~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 --P---SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --C---cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0 1112356788889999999999999999864
No 224
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-32 Score=307.31 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=192.6
Q ss_pred eecccCCeEEEEEEEC---CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCC
Q 000889 935 MIGSGGFGEVYKAQLR---DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGS 1010 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 1010 (1237)
.||+|+||.||+|.+. .+..||+|.+..... ...+.+.+|+.++++++||||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999765 345689998764332 22356889999999999999999999885 457899999999999
Q ss_pred HHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCccee
Q 000889 1011 LESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLS 1090 (1237)
Q Consensus 1011 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~ 1090 (1237)
|.+++.... ..+++..+.+++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++..........
T Consensus 81 L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 81 LNKFLSGKK----DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 999987532 4689999999999999999999999 999999999999999999999999999986543332211
Q ss_pred -eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1091 -VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1091 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
.....++..|+|||++.+..++.++||||||+++||+++ |..||..... ..+......... .. .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~~~~------~~--~ 219 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG------PEVMSFIEQGKR------LD--C 219 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHHHCCCC------CC--C
Confidence 112233578999999988889999999999999999996 9999864321 111111111111 01 1
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
+.. ...++.+++.+||..+|++||++.++.+.|+.+
T Consensus 220 ~~~---~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 PAE---CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 111 223566788899999999999999999999875
No 225
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.2e-33 Score=323.77 Aligned_cols=255 Identities=23% Similarity=0.301 Sum_probs=195.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||+||+++.. +++.||+|.+.... ......+.+|..+++.++|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999987 57789999886421 122345778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||++||+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 Ey~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 81 DYYVGGDLLTLLSKFE----DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred eCCCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 9999999999997632 3688899999999999999999999 99999999999999999999999999998664
Q ss_pred cCCcceeeeccccCCCcCCccccCc-----cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQS-----FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
.... .......|++.|||||++.+ ..++.++||||+||++|||++|+.||..... ...+.........
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~- 226 (331)
T cd05624 154 QDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHEER- 226 (331)
T ss_pred CCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-----HHHHHHHHcCCCc-
Confidence 3322 12234579999999999875 4678899999999999999999999964321 1111111111110
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFK--RPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~ell~~ 1203 (1237)
...+.........+.+++.+|+..++.+ |+++.+++++
T Consensus 227 -------~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 227 -------FQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred -------ccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 1111111111234566777888765543 5688888876
No 226
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=9.6e-33 Score=322.08 Aligned_cols=262 Identities=26% Similarity=0.328 Sum_probs=195.0
Q ss_pred HHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeC-----
Q 000889 925 EATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIG----- 996 (1237)
Q Consensus 925 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 996 (1237)
+..++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 45678999999999999999999875 578899998864221 2234577899999999999999999987543
Q ss_pred -CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEee
Q 000889 997 -EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSD 1075 (1237)
Q Consensus 997 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~D 1075 (1237)
...+++||++ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcC
Confidence 3568999988 6899887753 3689999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh
Q 000889 1076 FGMARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR 1154 (1237)
Q Consensus 1076 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1154 (1237)
||+++..... .....|++.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+..+......
T Consensus 162 fg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~ 234 (343)
T cd07878 162 FGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI--DQLKRIMEVVGT 234 (343)
T ss_pred CccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCC
Confidence 9999865432 234568999999999876 56889999999999999999999999653211 011111100000
Q ss_pred h--ccccccc-------CccccC-CCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1155 E--KRINEIL-------DPELTM-QTSD-----ETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1155 ~--~~~~~~~-------~~~l~~-~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. .....+. ...+.. .... ......+.+++.+|++.||++|||+.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0000000 000000 0000 0011245688899999999999999999987
No 227
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-32 Score=317.93 Aligned_cols=199 Identities=24% Similarity=0.365 Sum_probs=162.1
Q ss_pred CceecccCCeEEEEEEEC---CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEe--CCeEEEEEEecc
Q 000889 933 DSMIGSGGFGEVYKAQLR---DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKI--GEERLLVYEYMK 1007 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 1007 (1237)
.++||+|+||+||+|+.. ++..||+|++... .....+.+|++++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 357999999999999875 4578999988542 223457889999999999999999998854 456789999986
Q ss_pred CCCHHHHHhhhhc----CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee----CCCCceEEeecccc
Q 000889 1008 WGSLESVLHDRAK----GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLL----DENFEARVSDFGMA 1079 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll----~~~~~vkl~DfGla 1079 (1237)
++|.+++..... .....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+|
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 688888764321 1123588999999999999999999999 99999999999999 46689999999999
Q ss_pred eeeccCCc-ceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCC
Q 000889 1080 RLVNALDT-HLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1080 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
+....... ........||+.|+|||++.+. .++.++||||+||++|||++|++||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 87643221 1122346789999999998764 5889999999999999999999999753
No 228
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-34 Score=290.62 Aligned_cols=271 Identities=23% Similarity=0.391 Sum_probs=208.2
Q ss_pred CCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEEEeccC
Q 000889 932 ADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
....||.|+.|.||+++++ .|...|||.+.+... +..+++...++++...+ +|.||+.+|||..+...++.||.|.
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs- 174 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS- 174 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-
Confidence 3456999999999999987 478899999975432 33456777788777665 8999999999999999999999985
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
.-.+.+++... +++++..+-++...+++||.||.+++ +|+|||+||+|||+|+.|++|+||||.+.++-....
T Consensus 175 ~C~ekLlkrik----~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA- 247 (391)
T KOG0983|consen 175 TCAEKLLKRIK----GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA- 247 (391)
T ss_pred HHHHHHHHHhc----CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccc-
Confidence 34555555432 47899989999999999999999997 999999999999999999999999999987654333
Q ss_pred eeeeccccCCCcCCccccCc---cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1089 LSVSTLAGTPGYVPPEYYQS---FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.+..+|.+.|||||.+.- ..|+-.+||||||+.++|+.||+.||..-. .++......+..+ .|.
T Consensus 248 --htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~----tdFe~ltkvln~e-------PP~ 314 (391)
T KOG0983|consen 248 --HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK----TDFEVLTKVLNEE-------PPL 314 (391)
T ss_pred --cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC----ccHHHHHHHHhcC-------CCC
Confidence 255689999999999863 468889999999999999999999997522 1222222222211 122
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCCCCCccCchhhHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGDSLDSFSLKDTVIEE 1228 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~~~~~~~~~~~~~~~ 1228 (1237)
++...... ..|.+++..|+++|+.+||...+++++ .+...+|..+.+.-+|..|++..
T Consensus 315 L~~~~gFS---p~F~~fv~~CL~kd~r~RP~Y~~Ll~h--~Fi~~ye~a~~dVa~WF~dV~~~ 372 (391)
T KOG0983|consen 315 LPGHMGFS---PDFQSFVKDCLTKDHRKRPKYNKLLEH--PFIKRYETAEVDVASWFKDVMAK 372 (391)
T ss_pred CCcccCcC---HHHHHHHHHHhhcCcccCcchHHHhcC--cceeecchhhccHHHHHHHHHhc
Confidence 32222222 356667779999999999999999886 45556666777777888877653
No 229
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.2e-32 Score=307.40 Aligned_cols=249 Identities=30% Similarity=0.476 Sum_probs=195.0
Q ss_pred ceecccCCeEEEEEEECC----CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLRD----GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
++||+|+||.||+|++.. +..+|+|.+..... ...+++.+|+++++++.||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999997642 26899998864332 23457889999999999999999999875 5578999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 80 GPLLKYLKKR-----REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999764 3688999999999999999999999 9999999999999999999999999999866543322
Q ss_pred ee-eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1089 LS-VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1089 ~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
.. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ......+.. .....
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~---~~~~~~~~~---~~~~~-------- 217 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK---GAEVIAMLE---SGERL-------- 217 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC---HHHHHHHHH---cCCcC--------
Confidence 11 111223467999999998889999999999999999998 999986432 111211111 11110
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
..+.. ....+.+++.+|+..+|++||++.++++.|+.+.
T Consensus 218 ~~~~~---~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 PRPEE---CPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 01111 1235678899999999999999999999998763
No 230
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.2e-32 Score=306.24 Aligned_cols=247 Identities=27% Similarity=0.404 Sum_probs=195.0
Q ss_pred ceecccCCeEEEEEEECCCCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCHH
Q 000889 934 SMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLE 1012 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 1012 (1237)
++||+|+||.||+|...++..+|+|++...... ....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 368999999999999888889999987643322 2346889999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeee
Q 000889 1013 SVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVS 1092 (1237)
Q Consensus 1013 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~ 1092 (1237)
+++.... ..+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++......... ...
T Consensus 81 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~ 152 (250)
T cd05085 81 SFLRKKK----DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSG 152 (250)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccc-cCC
Confidence 9986532 3578999999999999999999999 9999999999999999999999999999754322111 111
Q ss_pred ccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCC
Q 000889 1093 TLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTS 1171 (1237)
Q Consensus 1093 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1171 (1237)
...++..|+|||++.+..++.++||||||+++||+++ |..||..... ........... .... ..
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~------~~~~~~~~~~~------~~~~--~~- 217 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN------QQAREQVEKGY------RMSC--PQ- 217 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHHHcCC------CCCC--CC-
Confidence 2234567999999998889999999999999999998 9999864321 11111111110 0011 11
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1172 DETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1172 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
.....+.+++.+|++.+|++||++.++++.|.
T Consensus 218 --~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 --KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred --CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 12246778889999999999999999999874
No 231
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.7e-33 Score=316.49 Aligned_cols=263 Identities=24% Similarity=0.321 Sum_probs=192.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhc---CCCCcccccceEEe-----CC
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKI---KHRNLVPLLGYCKI-----GE 997 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 997 (1237)
+|++.+.||+|+||+||+|++. +++.||+|.+..... .....+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888899999999999999887 578899998864322 2234566777777665 69999999998764 34
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
..++||||++ ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP---PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccC
Confidence 5799999998 58988887542 23589999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh--h
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR--E 1155 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~ 1155 (1237)
+++...... ......|+..|+|||++.+..++.++||||+||++|||++|++||..... ...+......... .
T Consensus 154 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~ 228 (288)
T cd07863 154 LARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE--ADQLGKIFDLIGLPPE 228 (288)
T ss_pred ccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH--HHHHHHHHHHhCCCCh
Confidence 998654322 12345678999999999988899999999999999999999999864321 1111111111000 0
Q ss_pred ccccc-------ccCccccCC--CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1156 KRINE-------ILDPELTMQ--TSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1156 ~~~~~-------~~~~~l~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..... ...+..... ...+.....+.+++.+|+++||++|||+.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 000000000 0001122356788899999999999999999864
No 232
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=9.8e-33 Score=309.18 Aligned_cols=254 Identities=26% Similarity=0.390 Sum_probs=203.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
++|++.+.||+|+||.||+|... +++.+++|.+........+.+.+|++++++++||||+++++++..+...+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888999999999999999886 47789999887555455678899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+.......
T Consensus 83 ~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 83 GGGSLQDIYQVTR----GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred CCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 9999999987642 3688999999999999999999999 99999999999999999999999999997654322
Q ss_pred cceeeeccccCCCcCCccccCcc---ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSF---RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
. ......++..|+|||.+.+. .++.++||||+|+++|||++|+.||..... ...... ...... ..
T Consensus 156 ~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-----~~~~~~--~~~~~~---~~ 223 (262)
T cd06613 156 A--KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP-----MRALFL--ISKSNF---PP 223 (262)
T ss_pred h--ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH--HHhccC---CC
Confidence 1 12345688899999999876 788999999999999999999999864321 001000 000000 00
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... .........+.+++.+||..+|.+|||+.+++++
T Consensus 224 ~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 224 PKL---KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred ccc---cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 011 0112233567889999999999999999999853
No 233
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.9e-33 Score=326.90 Aligned_cols=262 Identities=23% Similarity=0.283 Sum_probs=195.8
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeC------
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIG------ 996 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 996 (1237)
..++|++.+.||+|+||.||+|.+. .++.||+|++..... ...+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568999999999999999999876 578899998864322 2235677899999999999999999988643
Q ss_pred CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 997 EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 997 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
...++||||+++ ++.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 357999999974 67666642 478888999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh---
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH--- 1153 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--- 1153 (1237)
|+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+........
T Consensus 164 g~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~ 238 (355)
T cd07874 164 GLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID--QWNKVIEQLGTPC 238 (355)
T ss_pred cccccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCC
Confidence 999865322 12234578999999999999899999999999999999999999997543111 0100000000
Q ss_pred ----------------hhccccccc------CccccCCC-CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1154 ----------------REKRINEIL------DPELTMQT-SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 ----------------~~~~~~~~~------~~~l~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
......... +....... ........+.+++.+|++.||++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 00000000 001112456788999999999999999999997
No 234
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.2e-33 Score=322.36 Aligned_cols=255 Identities=22% Similarity=0.274 Sum_probs=193.6
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.++||+|+||+||+++.+. ++.+|+|.+.... ......+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 368889999999999999999874 6789999885321 222345788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ey~~~g~L~~~l~~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 81 DYYVGGDLLTLLSKFE----DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred eccCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 9999999999997532 3688899999999999999999999 99999999999999999999999999997653
Q ss_pred cCCcceeeeccccCCCcCCccccC-----ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQ-----SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
.... .......||+.|||||++. ...++.++|||||||++|||++|+.||..... ............
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~------~~~~~~i~~~~~- 225 (332)
T cd05623 154 EDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKE- 225 (332)
T ss_pred cCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH------HHHHHHHhCCCc-
Confidence 3222 1223457999999999986 34678899999999999999999999974321 111111111100
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhcccc--CCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDD--RPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~--dP~~RPt~~ell~~ 1203 (1237)
.... +.........+.+++.+|+.. ++..|+++.+++++
T Consensus 226 ----~~~~--p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 226 ----RFQF--PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ----cccC--CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0001 111111123455666677754 44447899999888
No 235
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-32 Score=309.03 Aligned_cols=252 Identities=28% Similarity=0.470 Sum_probs=193.7
Q ss_pred ceecccCCeEEEEEEECC-CC--EEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLRD-GS--VVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
++||+|+||.||+|++++ +. .+++|.+.... ....+.+.+|+++++++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999864 33 46777775322 23345788999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhhhc-----------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 1009 GSLESVLHDRAK-----------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 1009 gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
|+|.+++..... .....+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999976431 1123578999999999999999999998 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhc
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREK 1156 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1156 (1237)
++..... .........+..|+|||++.+..++.++||||||+++|||++ |..||..... ...........
T Consensus 158 l~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------~~~~~~~~~~~ 228 (270)
T cd05047 158 LSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKLPQGY 228 (270)
T ss_pred Cccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH------HHHHHHHhCCC
Confidence 9863221 111112234567999999988889999999999999999997 9999864321 11111111110
Q ss_pred ccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1157 RINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1157 ~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
. ... ... ....+.+++.+|++.+|.+|||+.++++.|+++.
T Consensus 229 ~------~~~--~~~---~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 R------LEK--PLN---CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred C------CCC--CCc---CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 011 111 1235678889999999999999999999998763
No 236
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2e-32 Score=305.50 Aligned_cols=251 Identities=27% Similarity=0.466 Sum_probs=200.3
Q ss_pred CCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
.+|++.+.||+|+||.||+|.+.++..+|+|++... .....++.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 357778899999999999999887889999987542 3345678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.+++.... ..+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||.++.......
T Consensus 83 ~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 83 HGCLSDYLRAQR----GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred CCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 999999987532 3578999999999999999999999 999999999999999999999999999976533211
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......++.+|+|||++.+..++.++||||+|+++|||++ |+.||..... .......... .....+..
T Consensus 156 ~-~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~~---~~~~~~~~ 225 (256)
T cd05112 156 T-SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN------SEVVETINAG---FRLYKPRL 225 (256)
T ss_pred c-ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH------HHHHHHHhCC---CCCCCCCC
Confidence 1 1122335678999999998889999999999999999998 9999864321 1111111111 01111111
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
....+.+++.+||+.+|++|||+.+++++|
T Consensus 226 --------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 --------ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred --------CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 124577889999999999999999999886
No 237
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1e-32 Score=307.85 Aligned_cols=251 Identities=22% Similarity=0.367 Sum_probs=202.3
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc--cCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV--TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|+..+.||+|+||.||.++.. +++.+++|++... .....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4888999999999999999875 5888999987543 233456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++.... ...+++..+..++.|+++|++|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 81 ANGGTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred cCCCcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 99999999987642 24689999999999999999999999 9999999999999999999999999999866443
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.. ......+++.|+|||++.+..++.++||||+|+++|||++|+.||..... .......... ....
T Consensus 155 ~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~------~~~~~~~~~~-~~~~----- 220 (256)
T cd08221 155 YS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP------LNLVVKIVQG-NYTP----- 220 (256)
T ss_pred cc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcC-CCCC-----
Confidence 32 22345689999999999888889999999999999999999999864321 1111111111 0000
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
. ......++.+++.+|++.+|.+||++.+++++.
T Consensus 221 --~---~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 221 --V---VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred --C---ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0 011223567888899999999999999998763
No 238
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.4e-33 Score=342.40 Aligned_cols=257 Identities=23% Similarity=0.369 Sum_probs=196.4
Q ss_pred HhCCCCCCceecccCCeEEEEEEECC-CCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEe--CCeEE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKI--GEERL 1000 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 1000 (1237)
..++|++.+.||+|+||+||+|++.. +..||+|.+.... ......+..|+.++++++|||||+++++|.. ....|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 34579999999999999999999874 6678888775322 2234568899999999999999999998854 35689
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCC----CCeeecCCCCCCeeeCC---------
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCI----PHIIHRDMKSSNVLLDE--------- 1067 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~----~~ivHrDikp~NIll~~--------- 1067 (1237)
+||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 999999999999999764321 2468999999999999999999998521 25999999999999964
Q ss_pred --------CCceEEeecccceeeccCCcceeeeccccCCCcCCccccCc--cccCcccchHHHHHHHHHHHcCCCCCCCC
Q 000889 1068 --------NFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQS--FRCTTKGDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1068 --------~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
.+.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 3458999999998654322 1234578999999999854 45889999999999999999999999642
Q ss_pred CCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1138 EFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. ....+....... +.++... ....+.+++.+||+.+|.+||++.+++++
T Consensus 247 ~-----~~~qli~~lk~~--------p~lpi~~----~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 247 N-----NFSQLISELKRG--------PDLPIKG----KSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred C-----cHHHHHHHHhcC--------CCCCcCC----CCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 2 122222221111 1111111 12356788889999999999999999954
No 239
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.2e-33 Score=318.90 Aligned_cols=263 Identities=23% Similarity=0.334 Sum_probs=196.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.+.||+|+||.||+|+++ +++.||+|.+.... ......+.+|++++++++||||+++++++......++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888999999999999999886 57889999886432 23345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
++ ++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 86 LD-KDLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred cc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 97 6898888654 23578899999999999999999999 9999999999999999999999999999754322
Q ss_pred CcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh---hcccccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR---EKRINEI 1161 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 1161 (1237)
.. ......+++.|+|||++.+. .++.++||||+||++|||++|+.||...... ........... ......+
T Consensus 158 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 158 TK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE---EQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred CC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCChhhchhh
Confidence 21 12234578899999998653 5788999999999999999999999754221 11100000000 0000000
Q ss_pred cC---------ccccCCC---CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 LD---------PELTMQT---SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 ~~---------~~l~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. +...... ........+.+++.+|++.||.+|||+.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00 0000000 000112346688899999999999999999985
No 240
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=9.5e-33 Score=307.18 Aligned_cols=248 Identities=27% Similarity=0.429 Sum_probs=196.2
Q ss_pred ceecccCCeEEEEEEECCCCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCHH
Q 000889 934 SMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLE 1012 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 1012 (1237)
++||+|+||.||+|.+.+++.||+|++...... ....+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999999877899999988654332 3457889999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeee
Q 000889 1013 SVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVS 1092 (1237)
Q Consensus 1013 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~ 1092 (1237)
+++.... ..+++..+..++.+++.|++|||++ +++||||||+||+++.++.+||+|||.++............
T Consensus 81 ~~l~~~~----~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 81 TFLRKKK----NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 9986532 3578889999999999999999999 99999999999999999999999999997654221111111
Q ss_pred ccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCC
Q 000889 1093 TLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTS 1171 (1237)
Q Consensus 1093 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1171 (1237)
...++..|+|||.+.+..++.++||||+|+++|||++ |..||..... .... ....... ....+
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~---~~~~---~~~~~~~--------~~~~~-- 217 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN---QQTR---ERIESGY--------RMPAP-- 217 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH---HHHH---HHHhcCC--------CCCCC--
Confidence 2234567999999988889999999999999999999 8888864321 1111 1111000 01111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1172 DETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1172 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
......+.+++.+|+..+|.+|||+.++++.|+
T Consensus 218 -~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 -QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 112236778889999999999999999999886
No 241
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1e-32 Score=310.22 Aligned_cols=255 Identities=23% Similarity=0.349 Sum_probs=197.8
Q ss_pred HHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 925 EATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 925 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.+++.+.....||+|+||.||+|++. ++..||+|.+........+.+.+|++++++++|+||+++++++..++..++||
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 34556666778999999999999876 56789999876544445567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCcc--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC-CCceEEeecccce
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKL--DWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE-NFEARVSDFGMAR 1080 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~-~~~vkl~DfGla~ 1080 (1237)
||+++++|.+++.... ..+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||.+.
T Consensus 85 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 85 EQVPGGSLSALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred ecCCCCCHHHHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 9999999999997542 234 7788889999999999999999 9999999999999986 6799999999997
Q ss_pred eeccCCcceeeeccccCCCcCCccccCccc--cCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1081 LVNALDTHLSVSTLAGTPGYVPPEYYQSFR--CTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1081 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
....... ......+++.|+|||++.+.. ++.++||||+|+++|+|++|+.||...... ....+......
T Consensus 158 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~---~~~~~~~~~~~---- 228 (268)
T cd06624 158 RLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP---QAAMFKVGMFK---- 228 (268)
T ss_pred ecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh---hhhHhhhhhhc----
Confidence 6543222 122345789999999986543 788999999999999999999998642210 11111110000
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+..+ .....++.+++.+||+.+|.+|||+.+++++
T Consensus 229 ---~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 ---IHPEIP-----ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ---cCCCCC-----cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 011111 1122356788889999999999999999865
No 242
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.2e-32 Score=312.81 Aligned_cols=263 Identities=23% Similarity=0.289 Sum_probs=196.5
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.+.||+|+||.||+|+.+ ++..||+|++.... ....+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999986 58899999886432 22245678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
++ ++|.+++..... +..+++..++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 81 LS-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred CC-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 97 689888865432 35689999999999999999999999 9999999999999999999999999999765432
Q ss_pred CcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh-----------
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH----------- 1153 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----------- 1153 (1237)
.. ......+++.|+|||++.+. .++.++||||+|+++|||++|+.||...... ...........
T Consensus 155 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 155 VR--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI--DQLFRIFRILGTPTEDVWPGVT 230 (285)
T ss_pred cc--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhhhcch
Confidence 11 12334578899999988654 5788999999999999999999999743210 00000000000
Q ss_pred ----hhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1154 ----REKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 ----~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
................ ......++.+++.+|+..||++|||+.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLRSA--VKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhHHHHhhccccCcchhHHh--cCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000000000000 00012355688889999999999999999864
No 243
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9.1e-33 Score=324.83 Aligned_cols=262 Identities=23% Similarity=0.273 Sum_probs=195.6
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeC------
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG------ 996 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 996 (1237)
..++|++.+.||+|+||.||+|++. .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3568999999999999999999876 57889999886432 22345678899999999999999999987543
Q ss_pred CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 997 EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 997 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
...++||||++ +++.+++.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeC
Confidence 35799999997 577777642 478888999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh---
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH--- 1153 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--- 1153 (1237)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+........
T Consensus 171 G~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~ 245 (364)
T cd07875 171 GLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID--QWNKVIEQLGTPC 245 (364)
T ss_pred CCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCC
Confidence 9997653321 2234578999999999999999999999999999999999999997532110 0000000000
Q ss_pred ----------------hhcccccc----cCccccCCCC---CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1154 ----------------REKRINEI----LDPELTMQTS---DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 ----------------~~~~~~~~----~~~~l~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
........ ..+....+.. .......+.+++.+|++.||.+|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 0000000000 00112356788999999999999999999987
No 244
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.2e-32 Score=309.50 Aligned_cols=250 Identities=26% Similarity=0.429 Sum_probs=197.9
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcC---------HHHHHHHHHHHHhcCCCCcccccceEEeCCe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQG---------DREFMAEMETIGKIKHRNLVPLLGYCKIGEE 998 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 998 (1237)
+|.+.+.||+|+||.||+|... ++..+|+|.+....... .+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778889999999999999875 57889999886432221 1457789999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1078 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGl 1078 (1237)
.++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCC
Confidence 99999999999999999753 3578888999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCc----ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh
Q 000889 1079 ARLVNALDT----HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR 1154 (1237)
Q Consensus 1079 a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1154 (1237)
++....... ........|+..|+|||.+.+..++.++||||+|+++|+|++|+.||.... .......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~---- 223 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT-----QLQAIFK---- 223 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc-----HHHHHHH----
Confidence 986652111 111123457889999999998889999999999999999999999997421 1111100
Q ss_pred hcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1155 EKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1155 ~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
......+..+ ......+.+++.+||+.+|++||++.+++++
T Consensus 224 ---~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 224 ---IGENASPEIP-----SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ---HhccCCCcCC-----cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0001111111 1122356678889999999999999999863
No 245
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=7.1e-33 Score=314.72 Aligned_cols=262 Identities=25% Similarity=0.372 Sum_probs=200.7
Q ss_pred HHHHHHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEE----
Q 000889 921 AHLLEATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCK---- 994 (1237)
Q Consensus 921 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~---- 994 (1237)
..+..+.++|++.+.||+|+||.||+|+.. +++.+|+|+.... .....++.+|+.+++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 89 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV 89 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence 344456778999999999999999999886 4778999977542 22345678899999999 6999999999874
Q ss_pred -eCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEE
Q 000889 995 -IGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARV 1073 (1237)
Q Consensus 995 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl 1073 (1237)
.++..++||||+++++|.+++..... ....+++..+..++.|+++|+.|||+. +++||||||+||+++.++.+|+
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLK-RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhc-cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEE
Confidence 34568999999999999998865322 235688999999999999999999999 9999999999999999999999
Q ss_pred eecccceeeccCCcceeeeccccCCCcCCccccCc-----cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHH
Q 000889 1074 SDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQS-----FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGW 1148 (1237)
Q Consensus 1074 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~ 1148 (1237)
+|||+++....... ......|++.|+|||++.. ..++.++||||+||++|||++|+.||..... ....
T Consensus 166 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~-----~~~~ 238 (286)
T cd06638 166 VDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP-----MRAL 238 (286)
T ss_pred ccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch-----hHHH
Confidence 99999986643221 1234568999999999853 4578899999999999999999999864321 1111
Q ss_pred HHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1149 AKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1149 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.. . .....+....+.. ....+.+++.+||+.+|++|||+.+++++.
T Consensus 239 ~~-~------~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 FK-I------PRNPPPTLHQPEL---WSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hh-c------cccCCCcccCCCC---cCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00 0 0000011111111 123577888899999999999999999864
No 246
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.5e-32 Score=314.58 Aligned_cols=260 Identities=27% Similarity=0.438 Sum_probs=200.7
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCC----EEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGS----VVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
++|+..+.||+|+||.||+|++. ++. .||+|.+...... ....+.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-CCcee
Confidence 45778889999999999999875 343 4677876543221 23367889999999999999999999865 45679
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
++||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 86 v~e~~~~g~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH----KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eehhcCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 99999999999998753 23578899999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
..............++..|+|||++.+..++.++||||||+++|||++ |+.||..... .....+ ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~---~~~~~~---~~~~~~--- 229 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---REIPDL---LEKGER--- 229 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH---HHCCCC---
Confidence 654332222223445778999999998889999999999999999997 8999864321 111111 111111
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccC
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTE 1212 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~ 1212 (1237)
...... ....+.+++.+||..+|++||++.++++.+.++..+..
T Consensus 230 -----~~~~~~---~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 230 -----LPQPPI---CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred -----CCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 111111 12356788889999999999999999999999876654
No 247
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-32 Score=311.35 Aligned_cols=254 Identities=26% Similarity=0.412 Sum_probs=198.1
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.+.||+|+||.||+|++. ++..||+|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 35788899999999999999987 68899999876432 22235688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.++++.... ...+++..+..++.++++|+.|||+.+ +|+||||||+||+++.++.+||+|||.+......
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 81 MDAGSLDKLYAGGVA--TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred cCCCCHHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 999999998875321 246899999999999999999999742 8999999999999999999999999999765322
Q ss_pred CcceeeeccccCCCcCCccccCccc------cCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFR------CTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRIN 1159 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1159 (1237)
. .....+++.|+|||++.+.. ++.++||||+||++|||++|+.||...... ........... ..
T Consensus 157 ~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~-~~-- 226 (286)
T cd06622 157 L----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA---NIFAQLSAIVD-GD-- 226 (286)
T ss_pred c----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh---hHHHHHHHHhh-cC--
Confidence 1 12346788999999985543 478999999999999999999999643211 11111110000 00
Q ss_pred cccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1160 EILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1160 ~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+.. ......++.+++.+|++.+|++||++.+++++
T Consensus 227 ---~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 227 ---PPTL-----PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred ---CCCC-----CcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 0111 11123456688889999999999999999975
No 248
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.5e-32 Score=309.22 Aligned_cols=257 Identities=23% Similarity=0.371 Sum_probs=200.8
Q ss_pred CCCCCCceecccCCeEEEEEEECC----CCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD----GSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
.+|++.+.||+|+||.||+|.+.+ ...||+|...... ....+.+.+|++++++++||||+++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457888999999999999998753 2468888776433 2334578899999999999999999998865 567899
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++|+|.+++.... ..+++..+..++.+++.|++|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 85 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 85 MELAPLGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEcCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 99999999999997532 3589999999999999999999999 9999999999999999999999999999866
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
...... ......++..|+|||.+.+..++.++||||||+++||+++ |..||...... .. ..........
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~---~~~~~~~~~~--- 227 (270)
T cd05056 158 EDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---DV---IGRIENGERL--- 227 (270)
T ss_pred ccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---HH---HHHHHcCCcC---
Confidence 443221 1122334568999999988889999999999999999986 99999644211 11 1111111111
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccc
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVD 1210 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~ 1210 (1237)
...... ...+.+++.+|+..+|.+|||+.++++.|+.+..+
T Consensus 228 -----~~~~~~---~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -----PMPPNC---PPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -----CCCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 111111 23567788899999999999999999999987653
No 249
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.2e-32 Score=310.66 Aligned_cols=249 Identities=26% Similarity=0.378 Sum_probs=201.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.+.||.|+||.||+|++. +++.||+|.+.... ......+.+|++++++++||||+++++++..+...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888899999999999999976 57889999876432 23345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||+++.....
T Consensus 81 ~~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 81 CGGGSCLDLLKPG------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred eCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 9999999998752 688999999999999999999999 9999999999999999999999999999877543
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
.. ......+++.|+|||++.+..++.++||||||+++|||++|+.||..... .. ...... .. ..+.
T Consensus 152 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~---~~---~~~~~~-~~-----~~~~ 217 (274)
T cd06609 152 MS--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP---MR---VLFLIP-KN-----NPPS 217 (274)
T ss_pred cc--ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch---HH---HHHHhh-hc-----CCCC
Confidence 21 22345688899999999988899999999999999999999999964321 00 011000 11 1111
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.... .....+.+++.+|+..+|++|||+.+++++
T Consensus 218 ~~~~----~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 218 LEGN----KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred Cccc----ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1111 022356778889999999999999999875
No 250
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.9e-32 Score=306.38 Aligned_cols=254 Identities=22% Similarity=0.349 Sum_probs=186.5
Q ss_pred eecccCCeEEEEEEECCCC---EEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCC
Q 000889 935 MIGSGGFGEVYKAQLRDGS---VVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGS 1010 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 1010 (1237)
.||+|+||.||+|+..++. .+++|.+.... ....+.+.+|+.+++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5899999999999765433 45566554322 2234678999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCccee
Q 000889 1011 LESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLS 1090 (1237)
Q Consensus 1011 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~ 1090 (1237)
|.++++..... ....++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++...........
T Consensus 82 L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 82 LKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred HHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999764321 23567777889999999999999999 999999999999999999999999999864322211112
Q ss_pred eeccccCCCcCCccccCc-------cccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1091 VSTLAGTPGYVPPEYYQS-------FRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1091 ~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.....++..|+|||++.. ..++.++||||||+++|||++ |..||..... ........... .....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~~~~-~~~~~ 230 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD------REVLNHVIKDQ-QVKLF 230 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHhhc-ccccC
Confidence 234567889999999753 245778999999999999997 5667753221 11111111111 11222
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
++..... ....+.+++..|| .+|++||++.++++.|.
T Consensus 231 ~~~~~~~-----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLELP-----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccCCC-----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3332221 1234566777899 67999999999998874
No 251
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-32 Score=310.88 Aligned_cols=260 Identities=27% Similarity=0.390 Sum_probs=203.7
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.+.||+|+||+||+|+.. ++..||+|++.... ....+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46778889999999999999876 57889998775432 23346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++... ..+++..+..++.+++.|+.|||+.+ +++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 85 MDCGSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred CCCCCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999988653 36899999999999999999999742 8999999999999999999999999998754322
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCc-----hHHHHHHHHhhhccccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDN-----NLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 1160 (1237)
. .....|+..|+|||++.+..++.++|||||||++||+++|+.||......... ....+........
T Consensus 158 ~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 229 (284)
T cd06620 158 I----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP---- 229 (284)
T ss_pred c----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc----
Confidence 1 12456899999999998888999999999999999999999999754322110 1111111111100
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
.+.+. .......+.+++.+|++++|++|||+.+++++..-++
T Consensus 230 --~~~~~----~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 230 --PPRLP----SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred --CCCCC----chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 01111 1112345778889999999999999999998754443
No 252
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.6e-32 Score=317.73 Aligned_cols=199 Identities=21% Similarity=0.293 Sum_probs=164.4
Q ss_pred CCceeccc--CCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 932 ADSMIGSG--GFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 932 ~~~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
+.++||+| +|++||+++.+ +++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45689999 78899999876 688999998864322 22345778999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+.......
T Consensus 82 ~~~~l~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 82 AYGSAKDLICTHFM---DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred CCCcHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 99999999975422 3588999999999999999999999 99999999999999999999999998754332111
Q ss_pred cce-----eeeccccCCCcCCccccCc--cccCcccchHHHHHHHHHHHcCCCCCCC
Q 000889 1087 THL-----SVSTLAGTPGYVPPEYYQS--FRCTTKGDVYSYGVILLELLSGKRPIDP 1136 (1237)
Q Consensus 1087 ~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~tg~~p~~~ 1136 (1237)
... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 110 0122346778999999976 4588999999999999999999999974
No 253
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.9e-33 Score=315.82 Aligned_cols=246 Identities=25% Similarity=0.388 Sum_probs=195.9
Q ss_pred CCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCC
Q 000889 932 ADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGS 1010 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 1010 (1237)
....||+|+||.||++... ++..||+|++........+.+.+|+.++++++||||+++++++..++..++||||+++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 3457999999999999875 588999998865444445668899999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCccee
Q 000889 1011 LESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLS 1090 (1237)
Q Consensus 1011 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~ 1090 (1237)
|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++........ .
T Consensus 106 L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~ 174 (292)
T cd06658 106 LTDIVTH------TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--K 174 (292)
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--c
Confidence 9998753 3578899999999999999999999 999999999999999999999999999875432221 1
Q ss_pred eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCC
Q 000889 1091 VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQT 1170 (1237)
Q Consensus 1091 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1170 (1237)
.....|+..|+|||++.+..++.++||||+|+++|||++|+.||..... .... .. +.....+......
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~-~~------~~~~~~~~~~~~~ 242 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP-----LQAM-RR------IRDNLPPRVKDSH 242 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHH-HH------HHhcCCCcccccc
Confidence 2335688999999999888899999999999999999999999864321 1110 10 0011111111111
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1171 SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1171 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.....+.+++.+|+..+|.+|||+.+++++
T Consensus 243 ---~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 243 ---KVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ---ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 112346678889999999999999999986
No 254
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.7e-33 Score=288.24 Aligned_cols=210 Identities=25% Similarity=0.352 Sum_probs=176.9
Q ss_pred HhCCCCCCceecccCCeEEEEEEECC-----CCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEe-CC
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLRD-----GSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKI-GE 997 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 997 (1237)
....|+....||+|.||.||+|..++ .+.+|+|+++..... -.....+|+..++.++||||+.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 34568999999999999999996543 336899998754322 12456789999999999999999998877 77
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC----CceEE
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN----FEARV 1073 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~----~~vkl 1073 (1237)
..++++||.+ -+|..+++..+....+.++...++.|+.||+.|+.|||++ -|+|||+||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 8899999998 6899999877666667899999999999999999999999 89999999999999876 99999
Q ss_pred eecccceeeccCCcce-eeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCC
Q 000889 1074 SDFGMARLVNALDTHL-SVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEF 1139 (1237)
Q Consensus 1074 ~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~ 1139 (1237)
+|||+|+.+...-... ....++-|..|+|||.+.|. .|+.+.|||++|||+.||++-++-|...+.
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~ 245 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREE 245 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhh
Confidence 9999999876543322 34556789999999999875 589999999999999999999888876543
No 255
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.4e-32 Score=311.08 Aligned_cols=250 Identities=27% Similarity=0.398 Sum_probs=201.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888999999999999999865 57889999886444444567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 99 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred CCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 99999999864 2578889999999999999999999 99999999999999999999999999987654332
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......+++.|+|||++.+..++.++||||||+++|++++|+.||........ ... ....+ .+..
T Consensus 170 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~--~~~----~~~~~------~~~~ 235 (293)
T cd06647 170 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYL----IATNG------TPEL 235 (293)
T ss_pred c--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh--eee----hhcCC------CCCC
Confidence 2 12345688899999999888899999999999999999999999975322110 000 00000 0001
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. ........+.+++.+||..+|++||++.+++++
T Consensus 236 ~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 236 Q---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred C---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 011122356788899999999999999999987
No 256
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.6e-32 Score=308.86 Aligned_cols=264 Identities=25% Similarity=0.347 Sum_probs=199.2
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
++|+..+.||+|+||.||+|+++ +++.||+|++.... ....+.+.+|++++++++||||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999987 58899999886432 2233567899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|++++.+..+.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 81 YCDHTVLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred ccCccHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 99998888776532 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh----------
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH---------- 1153 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---------- 1153 (1237)
... ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||......+ ..........
T Consensus 153 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 153 PGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD--QLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred Ccc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCChHHhhhc
Confidence 332 1223457889999999876 457889999999999999999999997533111 1111000000
Q ss_pred -hhcccccccCccccCCCC----CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1154 -REKRINEILDPELTMQTS----DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 -~~~~~~~~~~~~l~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..........+....... .+.....+.+++.+|++.+|++||++.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000000000000000000 00112457789999999999999999999864
No 257
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=346.53 Aligned_cols=380 Identities=25% Similarity=0.335 Sum_probs=227.2
Q ss_pred CCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCCCceee
Q 000889 226 LNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVIT 305 (1237)
Q Consensus 226 L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 305 (1237)
|+.||+++|++. ..|..+..+..|+.|+++.|.+. ..|.+ ...+.+|++|+|..|.+...+ ..+..+++|++|+
T Consensus 47 L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s--~~~~~~l~~lnL~~n~l~~lP--~~~~~lknl~~Ld 120 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSS--CSNMRNLQYLNLKNNRLQSLP--ASISELKNLQYLD 120 (1081)
T ss_pred eEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchh--hhhhhcchhheeccchhhcCc--hhHHhhhcccccc
Confidence 555555555442 23444444455555555555554 33322 233456666666666665322 2456677777777
Q ss_pred ccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEEEcccCc
Q 000889 306 LSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLRELDLSSNR 385 (1237)
Q Consensus 306 L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~ 385 (1237)
++.|++. .+|..+..++.++.++.++|..... ++... ++.++|..|.+.+.++.++... .. .|||.+|.
T Consensus 121 lS~N~f~--~~Pl~i~~lt~~~~~~~s~N~~~~~-----lg~~~-ik~~~l~~n~l~~~~~~~i~~l-~~--~ldLr~N~ 189 (1081)
T KOG0618|consen 121 LSFNHFG--PIPLVIEVLTAEEELAASNNEKIQR-----LGQTS-IKKLDLRLNVLGGSFLIDIYNL-TH--QLDLRYNE 189 (1081)
T ss_pred cchhccC--CCchhHHhhhHHHHHhhhcchhhhh-----hcccc-chhhhhhhhhcccchhcchhhh-he--eeecccch
Confidence 7777774 3677788888888888888832212 12222 7788888888877777766542 22 58888888
Q ss_pred CCCCCCcCcccccccceeeccCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCC
Q 000889 386 LTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPS 465 (1237)
Q Consensus 386 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 465 (1237)
+. ...+.++.+|+.|....|+++. ..-.-++|+.|+.++|.++...+.. .-.+|+++++++|+++ .+|+
T Consensus 190 ~~---~~dls~~~~l~~l~c~rn~ls~-----l~~~g~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~-~lp~ 258 (1081)
T KOG0618|consen 190 ME---VLDLSNLANLEVLHCERNQLSE-----LEISGPSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLS-NLPE 258 (1081)
T ss_pred hh---hhhhhhccchhhhhhhhcccce-----EEecCcchheeeeccCcceeecccc--ccccceeeecchhhhh-cchH
Confidence 76 2346677788888888887762 2234466777777777776333221 1246777777777776 3445
Q ss_pred CCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCcCcceeecccccccCccccccccc
Q 000889 466 GFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVN 545 (1237)
Q Consensus 466 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~ 545 (1237)
+++ .+.+|+.+...+|++. .+|..+...++|+.|++..|.++ .+|....+++.|+.|+|..|+|. .+|+.++.-
T Consensus 259 wi~---~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v 332 (1081)
T KOG0618|consen 259 WIG---ACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAV 332 (1081)
T ss_pred HHH---hcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhh
Confidence 553 4556667777777774 56666666677777777777776 56666666777777777777776 666655444
Q ss_pred CCC-ccEEEccccccccccc-cccccCCCccEEEeecccccccCCccccCccccceEEecCCccccCCCCCCCCCCCCCE
Q 000889 546 GGN-LETLILNNNHLTGAIP-KSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVW 623 (1237)
Q Consensus 546 l~~-L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 623 (1237)
+.. |..|+.+-|++. ..| ..=..+..|+.|+|.+|+++...-+.+-+.+.|++|+|++|+|.......+.++..|+.
T Consensus 333 ~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~Lee 411 (1081)
T KOG0618|consen 333 LNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEE 411 (1081)
T ss_pred hhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHH
Confidence 433 566666666665 233 11123345566666666666555555566666666666666665333334455666666
Q ss_pred EECCCCccccCCChhHHh
Q 000889 624 LDLNSNNLSGPLPSELAN 641 (1237)
Q Consensus 624 L~L~~N~l~g~ip~~~~~ 641 (1237)
|+||||+|+ .+|..+.+
T Consensus 412 L~LSGNkL~-~Lp~tva~ 428 (1081)
T KOG0618|consen 412 LNLSGNKLT-TLPDTVAN 428 (1081)
T ss_pred Hhcccchhh-hhhHHHHh
Confidence 666666665 55555443
No 258
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.7e-33 Score=317.50 Aligned_cols=197 Identities=28% Similarity=0.403 Sum_probs=170.9
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcC-C-----CCcccccceEEeCCeEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIK-H-----RNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 1001 (1237)
+|.+.++||+|+||.|.+|.+. +++.||||.++... .-..+...|++++..++ | -|+|++++||...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7899999999999999999876 58999999987543 22345567999999997 4 389999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC--CCceEEeecccc
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE--NFEARVSDFGMA 1079 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~--~~~vkl~DfGla 1079 (1237)
|+|.+. .+|.++++.... ..++...++.|+.||+.||.+||+. +|||+||||+|||+.+ ...|||+|||.|
T Consensus 266 VfELL~-~NLYellK~n~f---~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKF---RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eehhhh-hhHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccc
Confidence 999986 899999987654 4689999999999999999999999 9999999999999964 347999999999
Q ss_pred eeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCC
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSE 1138 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~ 1138 (1237)
+..... ....+.+..|+|||++.|.+|+.+.||||||||++||++|.+-|.++.
T Consensus 339 c~~~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 339 CFESQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred cccCCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 865421 125667889999999999999999999999999999999988887653
No 259
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.2e-32 Score=314.08 Aligned_cols=246 Identities=24% Similarity=0.368 Sum_probs=196.4
Q ss_pred CCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCC
Q 000889 932 ADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGS 1010 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 1010 (1237)
....||+|+||.||+|... ++..||+|++........+.+.+|+.+++.++||||+++++++..++..++||||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3457999999999999876 588999998865444455678899999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCccee
Q 000889 1011 LESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLS 1090 (1237)
Q Consensus 1011 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~ 1090 (1237)
|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........ .
T Consensus 105 L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~ 173 (297)
T cd06659 105 LTDIVSQ------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--K 173 (297)
T ss_pred HHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--c
Confidence 9987754 3578999999999999999999999 999999999999999999999999999875433221 1
Q ss_pred eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCC
Q 000889 1091 VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQT 1170 (1237)
Q Consensus 1091 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1170 (1237)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||..... ... ....... . .......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~-~~~~~~~-~-----~~~~~~~- 240 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-----VQA-MKRLRDS-P-----PPKLKNA- 240 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHH-HHHHhcc-C-----CCCcccc-
Confidence 2345688999999999988899999999999999999999999864321 111 1111100 0 0001000
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1171 SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1171 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
......+.+++.+|++.+|++||++.+++++
T Consensus 241 --~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 241 --HKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred --CCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0112346678889999999999999999986
No 260
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=9.9e-33 Score=313.16 Aligned_cols=262 Identities=22% Similarity=0.369 Sum_probs=203.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-----CCCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEe--CCeE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-----DGSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKI--GEER 999 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 999 (1237)
..|+..+.||+|+||.||+|++. .+..+|+|++...... ..+.+.+|++++++++||||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35777889999999999999864 3678999988754332 35678999999999999999999999877 5578
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 99999999999999997642 2589999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCccee-eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCc---------hHHHHH
Q 000889 1080 RLVNALDTHLS-VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDN---------NLVGWA 1149 (1237)
Q Consensus 1080 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~---------~~~~~~ 1149 (1237)
........... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+......... ....+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 87653222111 11234456799999998888999999999999999999999998643221100 011111
Q ss_pred HHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1150 KQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
....... ..... .....++.+++.+|++.+|++|||+.+++++|+.+
T Consensus 237 ~~~~~~~--------~~~~~---~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGE--------RLPRP---PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHcCC--------cCCCC---ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111110 11111 11224677889999999999999999999999876
No 261
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.3e-32 Score=307.48 Aligned_cols=252 Identities=28% Similarity=0.480 Sum_probs=196.1
Q ss_pred eecccCCeEEEEEEECC-------CCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 935 MIGSGGFGEVYKAQLRD-------GSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.||+|+||.||+|++.+ +..+|+|.+.... ......+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 68999999999998753 2478888775432 234567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcC--CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC-----ceEEeecccc
Q 000889 1007 KWGSLESVLHDRAKG--GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF-----EARVSDFGMA 1079 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~-----~vkl~DfGla 1079 (1237)
++++|.+++...... ....+++..+..++.|++.|++|||+. +++|+||||+||+++.++ .+|++|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999764321 224578899999999999999999999 999999999999999877 8999999999
Q ss_pred eeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+...............++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..... .......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~---~~~~~---~~~~~~~-- 230 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN---NQEVL---QHVTAGG-- 230 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC---HHHHH---HHHhcCC--
Confidence 76543322222223345678999999998899999999999999999998 999986332 11111 1111111
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
....... ....+.+++.+||..+|.+||++.++++.|++
T Consensus 231 ------~~~~~~~---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 ------RLQKPEN---CPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ------ccCCccc---chHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111111 22456788899999999999999999998863
No 262
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.4e-32 Score=307.29 Aligned_cols=238 Identities=24% Similarity=0.403 Sum_probs=187.4
Q ss_pred ceecccCCeEEEEEEECCCC-----------EEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 934 SMIGSGGFGEVYKAQLRDGS-----------VVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
+.||+|+||.||+|.+.+.. .+++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 36899999999999987433 4667765433222 6778999999999999999999999987 788999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC-------ceEEee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF-------EARVSD 1075 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~-------~vkl~D 1075 (1237)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|++|
T Consensus 79 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 79 EEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 99999999999997642 2688999999999999999999999 999999999999999887 799999
Q ss_pred cccceeeccCCcceeeeccccCCCcCCccccCcc--ccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHH
Q 000889 1076 FGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSF--RCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQL 1152 (1237)
Q Consensus 1076 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 1152 (1237)
||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..||...... ....+ .
T Consensus 152 fg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~---~~~~~---~ 219 (259)
T cd05037 152 PGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS---EKERF---Y 219 (259)
T ss_pred CCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch---hHHHH---H
Confidence 999986543 1234567789999999876 78899999999999999999 57776543211 11111 0
Q ss_pred hhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1153 HREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1153 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
... ...+... ...+.+++.+||..+|++|||+.++++.|+
T Consensus 220 ~~~--------~~~~~~~-----~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 220 QDQ--------HRLPMPD-----CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hcC--------CCCCCCC-----chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000 0011111 146778899999999999999999998763
No 263
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.2e-32 Score=333.81 Aligned_cols=263 Identities=21% Similarity=0.255 Sum_probs=191.9
Q ss_pred HHHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCC------CCcccccceEEeC
Q 000889 924 LEATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKH------RNLVPLLGYCKIG 996 (1237)
Q Consensus 924 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~~ 996 (1237)
....++|++.++||+|+||+||+|++. .++.||||++.... ...+.+..|+++++.++| ++++++++++...
T Consensus 125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 345678999999999999999999876 47789999885422 223456678888777754 4588888888764
Q ss_pred -CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeeeCCCC-----
Q 000889 997 -EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHH-SCIPHIIHRDMKSSNVLLDENF----- 1069 (1237)
Q Consensus 997 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrDikp~NIll~~~~----- 1069 (1237)
...++|||++ +++|.+++... ..+++..+..|+.|++.||+|||+ . +||||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccccc
Confidence 5788999988 68888888653 468999999999999999999997 5 999999999999998765
Q ss_pred -----------ceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCC
Q 000889 1070 -----------EARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSE 1138 (1237)
Q Consensus 1070 -----------~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~ 1138 (1237)
.+||+|||.+..... .....+||+.|||||++.+..++.++|||||||++|||++|+.||+...
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred ccccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 499999998864322 1235679999999999999999999999999999999999999997533
Q ss_pred CCCCchHHHHHHHHh--------------------hhcccccccCcccc------CCCCCHHHHHHHHHHHHhccccCCC
Q 000889 1139 FGDDNNLVGWAKQLH--------------------REKRINEILDPELT------MQTSDETELYQYLRISFECLDDRPF 1192 (1237)
Q Consensus 1139 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~l~------~~~~~~~~~~~l~~li~~cl~~dP~ 1192 (1237)
.. ..+........ .........++... ...........+.+++.+|++.||+
T Consensus 350 ~~--~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 427 (467)
T PTZ00284 350 NL--EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQ 427 (467)
T ss_pred hH--HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChh
Confidence 11 00100000000 00000000000000 0000001124567899999999999
Q ss_pred CCCCHHHHHHH
Q 000889 1193 KRPTMIQVMAM 1203 (1237)
Q Consensus 1193 ~RPt~~ell~~ 1203 (1237)
+|||+.|++++
T Consensus 428 ~R~ta~e~L~H 438 (467)
T PTZ00284 428 KRLNARQMTTH 438 (467)
T ss_pred hCCCHHHHhcC
Confidence 99999999986
No 264
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.1e-32 Score=305.12 Aligned_cols=252 Identities=26% Similarity=0.425 Sum_probs=190.4
Q ss_pred ceecccCCeEEEEEEECC----CCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEE-eCCeEEEEEEecc
Q 000889 934 SMIGSGGFGEVYKAQLRD----GSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCK-IGEERLLVYEYMK 1007 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 1007 (1237)
+.||+|+||.||+|.+.+ ...||+|++.... ....+.+.+|+.+++.++||||+++++++. .++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 368999999999998642 3478999875322 223457888999999999999999999775 4556789999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+|+|.+++.... ....+..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 81 HGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999997542 3457778889999999999999999 999999999999999999999999999975532211
Q ss_pred c--eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcC-CCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1088 H--LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSG-KRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1088 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
. .......++..|+|||++.+..++.++||||||+++|||++| .+||.... ............
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~~~~~~~~~~~~-------- 219 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD------SFDITVYLLQGR-------- 219 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHhcCC--------
Confidence 1 111233456789999999888899999999999999999995 45554221 111111111110
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhccc
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~ 1209 (1237)
........ ...+.+++.+||+.+|++||++.++++.|+++..
T Consensus 220 ~~~~~~~~---~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 220 RLLQPEYC---PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCCCCCcC---CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 01111111 2356788889999999999999999999998754
No 265
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.3e-32 Score=311.89 Aligned_cols=261 Identities=26% Similarity=0.414 Sum_probs=200.2
Q ss_pred cCHHHHHHHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEEe
Q 000889 918 LTFAHLLEATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCKI 995 (1237)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 995 (1237)
.+..++..+.+.|++.+.||+|+||.||+|++. +++.+|+|.+... .....++..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 344455556778999999999999999999986 5788999877543 23345678899999998 69999999998853
Q ss_pred ------CCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC
Q 000889 996 ------GEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF 1069 (1237)
Q Consensus 996 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~ 1069 (1237)
....+++|||+++|+|.+++.... ...+++..+..++.|+++|++|||+. +++||||||+||++++++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK---GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 457899999999999999987543 24578888899999999999999999 999999999999999999
Q ss_pred ceEEeecccceeeccCCcceeeeccccCCCcCCccccC-----ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCch
Q 000889 1070 EARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQ-----SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNN 1144 (1237)
Q Consensus 1070 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~ 1144 (1237)
.++|+|||++........ ......|++.|+|||++. ...++.++||||+||++|||++|+.||.....
T Consensus 159 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~----- 231 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP----- 231 (282)
T ss_pred CEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH-----
Confidence 999999999875532211 123456889999999985 34678899999999999999999999864321
Q ss_pred HHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1145 LVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1145 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
...... ......+... .......+.+++.+||+.+|.+|||+.+++++
T Consensus 232 ~~~~~~-------~~~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 232 MRALFL-------IPRNPPPKLK----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred Hhhhhh-------HhhCCCCCCc----ccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 000000 0000011111 11122357788889999999999999999763
No 266
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.6e-32 Score=312.50 Aligned_cols=262 Identities=27% Similarity=0.392 Sum_probs=201.3
Q ss_pred HHHHHHHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEEeC-
Q 000889 920 FAHLLEATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCKIG- 996 (1237)
Q Consensus 920 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 996 (1237)
..++..+.++|++.+.||+|+||.||+|... +++.+|+|.+... ......+.+|+.+++++ +|||++++++++...
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 3444456788999999999999999999985 5788999987542 22345678899999999 799999999998653
Q ss_pred ----CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceE
Q 000889 997 ----EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEAR 1072 (1237)
Q Consensus 997 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vk 1072 (1237)
...++||||+++++|.++++.... ....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 358999999999999999875322 235689999999999999999999999 999999999999999999999
Q ss_pred EeecccceeeccCCcceeeeccccCCCcCCccccCcc-----ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHH
Q 000889 1073 VSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSF-----RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVG 1147 (1237)
Q Consensus 1073 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~ 1147 (1237)
|+|||++......... .....|+..|+|||++... .++.++||||+||++|||++|+.||..... ...
T Consensus 169 l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~-----~~~ 241 (291)
T cd06639 169 LVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP-----VKT 241 (291)
T ss_pred Eeecccchhccccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH-----HHH
Confidence 9999999765432211 2335688899999998643 367899999999999999999999864321 111
Q ss_pred HHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1148 WAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. .... .... +.... .......+.+++.+|++.+|++||++.+++++
T Consensus 242 ~-~~~~-~~~~-----~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 242 L-FKIP-RNPP-----PTLLH---PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred H-HHHh-cCCC-----CCCCc---ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1 0100 0100 11111 11122357788999999999999999999875
No 267
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.2e-33 Score=323.10 Aligned_cols=241 Identities=22% Similarity=0.283 Sum_probs=185.4
Q ss_pred ecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhc---CCCCcccccceEEeCCeEEEEEEeccC
Q 000889 936 IGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKI---KHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 936 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
||+|+||+||+|++. +++.||+|++..... .....+..|..++.+. +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999986 588999998854221 1223455677777665 699999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~- 151 (330)
T cd05586 81 GELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK- 151 (330)
T ss_pred ChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-
Confidence 9999988653 4688999999999999999999999 999999999999999999999999999975432221
Q ss_pred eeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
.....+||+.|||||++.+. .++.++||||+||++|||++|+.||..... .......... . ..++
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~------~~~~~~i~~~-~------~~~~ 217 (330)
T cd05586 152 -TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT------QQMYRNIAFG-K------VRFP 217 (330)
T ss_pred -CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH------HHHHHHHHcC-C------CCCC
Confidence 12356799999999998764 478999999999999999999999975321 1111111110 0 1111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCC----CHHHHHHH
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRP----TMIQVMAM 1203 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RP----t~~ell~~ 1203 (1237)
... ....+.+++.+|++.+|.+|| ++.+++++
T Consensus 218 ~~~----~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 218 KNV----LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred Ccc----CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 111 112455788899999999998 56666654
No 268
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.2e-32 Score=304.12 Aligned_cols=250 Identities=25% Similarity=0.392 Sum_probs=198.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEe-CCeEEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKI-GEERLLVYE 1004 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 1004 (1237)
+|++.+.||+|++|.||+|+.+ +++.||+|++.... ....+.+.+|++++++++|||++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4888999999999999999976 47789999885432 2234568889999999999999999998764 446789999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+++++|.+++.... ...+++..+..++.+++.|++|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 81 FCEGGDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred ccCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 999999999997642 24689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
... ......+++.|+|||++.+..++.++||||+|+++|||++|+.||.... .......... ... +
T Consensus 155 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~~~~~~~~-~~~-----~ 220 (257)
T cd08223 155 QCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD------MNSLVYRIIE-GKL-----P 220 (257)
T ss_pred cCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHh-cCC-----C
Confidence 222 1234568899999999999889999999999999999999999986432 1111111111 111 0
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. .......+.+++.+|++.+|++|||+.+++++
T Consensus 221 ~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 PM-----PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CC-----ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11 11122356788889999999999999999865
No 269
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.4e-32 Score=307.40 Aligned_cols=255 Identities=22% Similarity=0.380 Sum_probs=199.4
Q ss_pred CCCCCceecccCCeEEEEEEECC--CCEEEEEEecccc----------CcCHHHHHHHHHHHHh-cCCCCcccccceEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD--GSVVAIKKLIHVT----------GQGDREFMAEMETIGK-IKHRNLVPLLGYCKI 995 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 995 (1237)
+|++.+.||+|+||.||+|+++. ++.+|+|.+.... .....++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999999875 6789999875321 1122446778888765 799999999999999
Q ss_pred CCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEee
Q 000889 996 GEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSD 1075 (1237)
Q Consensus 996 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~D 1075 (1237)
++..++||||+++++|.+++..... ....+++..++.++.|++.|+.|||+.. +++|+||+|+||+++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKE-KKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999999865322 2356899999999999999999999631 899999999999999999999999
Q ss_pred cccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh
Q 000889 1076 FGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE 1155 (1237)
Q Consensus 1076 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1155 (1237)
||.+....... ......|+..|+|||++.+..++.++||||||+++|||++|+.||..... .........
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~------~~~~~~~~~- 227 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM------LSLATKIVE- 227 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH------HHHHHHHhh-
Confidence 99998654432 23455688999999999988899999999999999999999999864321 111111111
Q ss_pred cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1156 KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1156 ~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
.... + .. .......+.+++.+||+.+|++||++.|+.++++
T Consensus 228 ~~~~----~-~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 AVYE----P-LP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ccCC----c-CC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1000 0 00 0011235678888999999999999999999875
No 270
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.4e-32 Score=309.70 Aligned_cols=239 Identities=21% Similarity=0.333 Sum_probs=185.0
Q ss_pred eecccCCeEEEEEEECC-------------------------CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccc
Q 000889 935 MIGSGGFGEVYKAQLRD-------------------------GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPL 989 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 989 (1237)
+||+|+||.||+|.... ...||+|.+..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997521 13578887754333334568889999999999999999
Q ss_pred cceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC
Q 000889 990 LGYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF 1069 (1237)
Q Consensus 990 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~ 1069 (1237)
++++......++||||+++|+|..++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccC
Confidence 99999999999999999999999988653 24678899999999999999999999 999999999999997643
Q ss_pred -------ceEEeecccceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHH-cCCCCCCCCCCC
Q 000889 1070 -------EARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELL-SGKRPIDPSEFG 1140 (1237)
Q Consensus 1070 -------~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~-tg~~p~~~~~~~ 1140 (1237)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||......
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred cccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 4899999998644321 22357788999998865 56889999999999999985 799998643211
Q ss_pred CCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1141 DDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1141 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
. ...+. ... ...+.. ....+.+++.+||+.+|++|||+.++++.|+
T Consensus 229 ~---~~~~~---~~~--------~~~~~~-----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 E---KERFY---EKK--------HRLPEP-----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H---HHHHH---Hhc--------cCCCCC-----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1 11110 000 011111 1125778889999999999999999998873
No 271
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-33 Score=316.97 Aligned_cols=244 Identities=24% Similarity=0.398 Sum_probs=191.5
Q ss_pred CceecccCCeEEEEEEEC-CCCEEEEEE--ecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCe--EEEEEEe
Q 000889 933 DSMIGSGGFGEVYKAQLR-DGSVVAIKK--LIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEE--RLLVYEY 1005 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~--~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~ 1005 (1237)
..+||+|+|-+||+|.+. +|..||--. +.... +...+.|..|+.+++.++||||+++|+++.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 457999999999999986 355565322 22222 2334679999999999999999999999987655 6789999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC-CCceEEeecccceeecc
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE-NFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~-~~~vkl~DfGla~~~~~ 1084 (1237)
+..|+|..|+.+. +.+.....+.|+.||++||.|||++ .|+|+|||||.+||+|+. .|.|||+|+|+|.....
T Consensus 125 ~TSGtLr~Y~kk~-----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 125 FTSGTLREYRKKH-----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ccCCcHHHHHHHh-----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999875 4678889999999999999999998 678999999999999974 68999999999987654
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
.. .....|||.|||||+.. ..|...+||||||++|.||+|+..||.. -.+.++..++...+.....+
T Consensus 199 s~----aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE-----C~n~AQIYKKV~SGiKP~sl--- 265 (632)
T KOG0584|consen 199 SH----AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE-----CTNPAQIYKKVTSGIKPAAL--- 265 (632)
T ss_pred cc----cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh-----hCCHHHHHHHHHcCCCHHHh---
Confidence 32 23478999999999998 5899999999999999999999999852 22333333333333211111
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
....+ .++.++|.+|+.. ..+|||+.|+++.
T Consensus 266 ---~kV~d----Pevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 266 ---SKVKD----PEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ---hccCC----HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 11111 2456788899999 8999999999976
No 272
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.5e-32 Score=303.91 Aligned_cols=248 Identities=25% Similarity=0.438 Sum_probs=198.6
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-----cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-----QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
+|+..+.||+|+||.||+|... ++..|++|.+..... +..+.+.+|++++++++||||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777889999999999999987 688999998764321 2345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||++...
T Consensus 81 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 81 LELVPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred EEecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceec
Confidence 9999999999998753 3578999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCcceeeeccccCCCcCCccccCccc-cCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFR-CTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
.... ......++..|+|||.+.... ++.++|+||+|+++|+|++|+.||.... ... ............
T Consensus 153 ~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~-----~~~-~~~~~~~~~~~~-- 221 (258)
T cd06632 153 VEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE-----GVA-AVFKIGRSKELP-- 221 (258)
T ss_pred cccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc-----HHH-HHHHHHhcccCC--
Confidence 4332 223456889999999987766 8899999999999999999999986432 111 111111101110
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. + ......+.+++.+|++.+|.+||++.+++++
T Consensus 222 ---~~--~---~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 222 ---PI--P---DHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ---Cc--C---CCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 00 0 1112356678889999999999999999864
No 273
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.9e-32 Score=306.56 Aligned_cols=254 Identities=24% Similarity=0.391 Sum_probs=198.9
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc------CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ------GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 1001 (1237)
+|+..+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4778899999999999999874 6889999988643311 23568889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC-ceEEeecccce
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF-EARVSDFGMAR 1080 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~-~vkl~DfGla~ 1080 (1237)
||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++ .+||+|||.+.
T Consensus 81 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~ 152 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAA 152 (268)
T ss_pred EEeccCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence 99999999999998753 3678899999999999999999999 999999999999998775 59999999997
Q ss_pred eeccCCcc--eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1081 LVNALDTH--LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1081 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
........ .......++..|+|||++.+..++.++||||+|+++|+|++|..||........ ...+... ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~-~~~--- 226 (268)
T cd06630 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH--LALIFKI-ASA--- 226 (268)
T ss_pred ccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch--HHHHHHH-hcc---
Confidence 66543211 111234678899999999888899999999999999999999999864332111 1111010 000
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
...+.. .......+.+++.+|++.+|.+|||+.+++++
T Consensus 227 --~~~~~~-----~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 227 --TTAPSI-----PEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred --CCCCCC-----chhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 001111 11223457788889999999999999999864
No 274
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.1e-32 Score=306.98 Aligned_cols=255 Identities=25% Similarity=0.432 Sum_probs=197.1
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---c-------CHHHHHHHHHHHHhcCCCCcccccceEEeCC
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---Q-------GDREFMAEMETIGKIKHRNLVPLLGYCKIGE 997 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 997 (1237)
+|...+.||+|+||.||+|... +++.||+|.+..... . ..+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4777889999999999999875 588999998752111 0 1235778999999999999999999999999
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
..++||||+++++|.++++.. ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecc
Confidence 999999999999999998764 3688889999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccCccc--cCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQSFR--CTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE 1155 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1155 (1237)
+++...............|+..|+|||++.... ++.++||||+|+++||+++|..||.... ....+... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~-~~~ 227 (272)
T cd06629 154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE-----AIAAMFKL-GNK 227 (272)
T ss_pred ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc-----hHHHHHHh-hcc
Confidence 997654322222223456888999999987654 7899999999999999999999986322 11111110 000
Q ss_pred cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1156 KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1156 ~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.....+.... .......+.+++.+|++++|++|||+.+++++
T Consensus 228 -~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 -RSAPPIPPDV-----SMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred -ccCCcCCccc-----cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0001111111 11123467788889999999999999999875
No 275
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.2e-32 Score=313.58 Aligned_cols=255 Identities=21% Similarity=0.282 Sum_probs=196.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||.||+|+.. .++.||+|.+..... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999987 467899998764321 22346778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||++|++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++...
T Consensus 81 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~ 152 (305)
T cd05609 81 EYVEGGDCATLLKNI-----GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGL 152 (305)
T ss_pred ecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccC
Confidence 999999999999653 3688999999999999999999999 99999999999999999999999999986421
Q ss_pred cCC-------------cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHH
Q 000889 1084 ALD-------------THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAK 1150 (1237)
Q Consensus 1084 ~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1150 (1237)
... .........++..|+|||.+.+..++.++|+||||+++|||++|..||.+... ..+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~------~~~~~ 226 (305)
T cd05609 153 MSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP------EELFG 226 (305)
T ss_pred cCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHH
Confidence 100 00011124578899999999888899999999999999999999999864321 11111
Q ss_pred HHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1151 QLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
...... ...+.. .......+.+++.+|++.+|++||++.++.+.++
T Consensus 227 ~~~~~~----~~~~~~-----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 227 QVISDD----IEWPEG-----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHHhcc----cCCCCc-----cccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 111110 001110 0112234678888999999999999655554443
No 276
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.9e-32 Score=305.24 Aligned_cols=259 Identities=25% Similarity=0.390 Sum_probs=203.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|++.++.++|+||+++++.+..++..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46889999999999999999875 57789999885422 23456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.++++.... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 81 LSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred cCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 999999999976432 24689999999999999999999999 9999999999999999999999999998766543
Q ss_pred Ccce--eeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1086 DTHL--SVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1086 ~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.... ......|+..|+|||++... .++.++|||||||++|||++|+.||...... ..........
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~~~~------- 223 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-----KVLMLTLQND------- 223 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-----hhHHHHhcCC-------
Confidence 3221 12344688999999998876 7899999999999999999999999643211 1111111110
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+..............+.+++.+|++.+|++||++.+++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 224 PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 01111110001123456788889999999999999999874
No 277
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.2e-32 Score=310.33 Aligned_cols=264 Identities=25% Similarity=0.342 Sum_probs=194.4
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.+.||+|+||.||+|++. +|+.||+|++.... ......+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999986 58899999886422 12234677899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
++ ++|.+++... ...+++..++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 81 CD-QDLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 97 5888877643 24689999999999999999999999 9999999999999999999999999999765432
Q ss_pred CcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--c---ccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--K---RIN 1159 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~---~~~ 1159 (1237)
.. ......++..|+|||++.+. .++.++||||+||++|||++|+.|+...... ...+.......... . .+.
T Consensus 153 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 153 VR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred CC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH-HHHHHHHHHHhCCCChHHhHHhh
Confidence 21 12334578899999998764 4788999999999999999999986432211 00010000000000 0 000
Q ss_pred cccC----ccccCCCC----CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1160 EILD----PELTMQTS----DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1160 ~~~~----~~l~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
...+ +....... .+....++.+++.+|++.+|.+|||+.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0000 00000000 01112456688889999999999999999864
No 278
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.9e-32 Score=314.66 Aligned_cols=198 Identities=24% Similarity=0.369 Sum_probs=160.9
Q ss_pred ceecccCCeEEEEEEECC---CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEe--CCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLRD---GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKI--GEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~ 1008 (1237)
.+||+|+||+||+|+.++ +..||+|++... .....+.+|++++++++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 579999999999999753 468999987542 223467889999999999999999998854 457799999987
Q ss_pred CCHHHHHhhhhc----CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee----CCCCceEEeecccce
Q 000889 1009 GSLESVLHDRAK----GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLL----DENFEARVSDFGMAR 1080 (1237)
Q Consensus 1009 gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll----~~~~~vkl~DfGla~ 1080 (1237)
++|.+++..... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 578888754321 1123578999999999999999999999 99999999999999 567899999999998
Q ss_pred eeccCCcc-eeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCC
Q 000889 1081 LVNALDTH-LSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1081 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 66433221 122345689999999998764 5789999999999999999999999753
No 279
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.6e-32 Score=305.36 Aligned_cols=251 Identities=22% Similarity=0.377 Sum_probs=192.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-----cCHHHHHHHHHHHHhcCCCCcccccceEEe--CCeE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-----QGDREFMAEMETIGKIKHRNLVPLLGYCKI--GEER 999 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 999 (1237)
.+|+..+.||+|+||.||+|... ++..||+|++..... .....+.+|+.++++++||||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46889999999999999999876 588999998754321 122457889999999999999999998865 3567
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
+++|||+++++|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 82 ~l~~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~ 153 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGAS 153 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCc
Confidence 8999999999999998753 3578888999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCc-ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1080 RLVNALDT-HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1080 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+....... ........++..|+|||++.+..++.++||||+||++|||++|+.||.... ..... .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~-----~~~~~-~~~~~~~-- 225 (266)
T cd06651 154 KRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE-----AMAAI-FKIATQP-- 225 (266)
T ss_pred cccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc-----hHHHH-HHHhcCC--
Confidence 76543211 111223458889999999998889999999999999999999999986421 11111 1110000
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+.++ ......+..++ +||..+|++||++.+++++
T Consensus 226 ---~~~~~~-----~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 226 ---TNPQLP-----SHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred ---CCCCCc-----hhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 111111 11112334454 6888999999999999864
No 280
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.9e-32 Score=309.30 Aligned_cols=258 Identities=23% Similarity=0.427 Sum_probs=200.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC------CCCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR------DGSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 1000 (1237)
.+|+..+.||+|+||.||+|+.+ +...|++|.+...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46888899999999999999865 2457888877543322 2457899999999999999999999999888999
Q ss_pred EEEEeccCCCHHHHHhhhhcCC----CCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGG----GTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
+||||+++|+|.+++....... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997643211 12589999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhh
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHRE 1155 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1155 (1237)
|+++...... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ..... .... .
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~---~~~~~---~~~~-~ 233 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS---DEEVL---NRLQ-A 233 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc---hHHHH---HHHH-c
Confidence 9987543221 112233456778999999988888999999999999999998 788885322 11111 1111 1
Q ss_pred cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1156 KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1156 ~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
..... ..... ....+.+++.+|++.+|++|||+.++++.|.
T Consensus 234 ~~~~~------~~~~~---~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 GKLEL------PVPEG---CPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCcCC------CCCCC---CCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11110 00111 1235778888999999999999999999885
No 281
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.8e-32 Score=304.33 Aligned_cols=250 Identities=22% Similarity=0.375 Sum_probs=200.6
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.+.||+|+||.||+++.. +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4888899999999999999876 57899999886422 22345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++.... ...+++..+.+++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 81 CEGGDLYKKINAQR---GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 99999999987532 23578899999999999999999999 9999999999999999999999999999866432
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
... .....|++.|+|||+..+..++.++|||||||++|+|++|+.||.... ............ . +.
T Consensus 155 ~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~~~~-~-----~~ 220 (256)
T cd08218 155 VEL--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN------MKNLVLKIIRGS-Y-----PP 220 (256)
T ss_pred hhh--hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC------HHHHHHHHhcCC-C-----CC
Confidence 221 123457889999999998889999999999999999999999986432 111111111110 0 00
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. + ......+.+++.+|++.+|++||++.+++++
T Consensus 221 ~--~---~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 221 V--S---SHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred C--c---ccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1 1 1122356788889999999999999999975
No 282
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.4e-32 Score=305.86 Aligned_cols=249 Identities=26% Similarity=0.338 Sum_probs=200.8
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.|+..+.||+|+||.||+|++. ++..||+|.+.... ......+.+|+++++++.||||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4677788999999999999986 47889999876432 233456888999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
++++|.+++.. ..+++..+..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 85 ~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 85 GGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 99999998864 3578888999999999999999999 99999999999999999999999999997664322
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
. ......++..|+|||++.+..++.++|||||||++|||++|..||....... .... +.....
T Consensus 156 ~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~------~~~~------~~~~~~--- 218 (277)
T cd06640 156 I--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR------VLFL------IPKNNP--- 218 (277)
T ss_pred c--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh------Hhhh------hhcCCC---
Confidence 1 1233467889999999988889999999999999999999999986432110 0000 000000
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
+.........+.+++.+||+.+|++||++.+++++--
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 219 --PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred --CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 1112234456778999999999999999999988743
No 283
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.6e-32 Score=310.22 Aligned_cols=246 Identities=27% Similarity=0.386 Sum_probs=196.6
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
|+..+.||+|+||.||+|.+. ++..||+|.+.... ....+.+.+|++++++++||||+++++++..+...++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 555678999999999999876 47789999875332 2234568899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.+++.. ..+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.+|++|||++........
T Consensus 86 ~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 86 GGSALDLLKP------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 9999998853 3678899999999999999999999 999999999999999999999999999976543221
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
......++..|+|||++.+..++.++||||||+++|||++|+.||....... . ... +.....+..
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~---~~~------~~~~~~~~~- 221 (277)
T cd06642 157 --KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---V---LFL------IPKNSPPTL- 221 (277)
T ss_pred --hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh---H---Hhh------hhcCCCCCC-
Confidence 1223467889999999998889999999999999999999999986432110 0 000 000001111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.......+.+++.+|++.+|++||++.+++++
T Consensus 222 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 ----EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ----CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 11223457788899999999999999999986
No 284
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.8e-32 Score=313.41 Aligned_cols=254 Identities=23% Similarity=0.318 Sum_probs=200.4
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|+..+.||+|+||+||+|...+ ++.||+|.+...... ..+.+.+|++++++++||||+++++++..+...++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 368888999999999999999874 889999988653322 3456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+.+++|.+++.... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 81 DYCPGGELFRLLQRQP---GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EecCCCCHHHHHHhCC---CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 9999999999987532 25689999999999999999999999 99999999999999999999999999987543
Q ss_pred cCCcce---------------------------eeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCC
Q 000889 1084 ALDTHL---------------------------SVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDP 1136 (1237)
Q Consensus 1084 ~~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~ 1136 (1237)
...... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 234 (316)
T cd05574 155 VEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKG 234 (316)
T ss_pred ccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCC
Confidence 221100 11234678899999999988899999999999999999999999974
Q ss_pred CCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCC----HHHHHHH
Q 000889 1137 SEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPT----MIQVMAM 1203 (1237)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~ell~~ 1203 (1237)
.... ..+... .......... ......+.+++.+|+..+|++||+ +.+++++
T Consensus 235 ~~~~-----~~~~~~----------~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 235 SNRD-----ETFSNI----------LKKEVTFPGS-PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred CchH-----HHHHHH----------hcCCccCCCc-cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 3211 111111 1111111111 112346778888999999999999 7777764
No 285
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-33 Score=316.96 Aligned_cols=271 Identities=25% Similarity=0.383 Sum_probs=202.4
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeC------CeEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIG------EERL 1000 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 1000 (1237)
.|...+.||+|+||.||+|+.+ .|+.||||.+..... ...+...+|++++++++|||||++++.-.+. ....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3455678999999999999965 699999999876443 2345678999999999999999999976543 3568
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC--CCC--ceEEeec
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD--ENF--EARVSDF 1076 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~--~~~--~vkl~Df 1076 (1237)
+|||||.||+|+.++++... ...+++.+.+.++.+++.||.|||++ +||||||||.||++- ++| ..||+||
T Consensus 94 lvmEyC~gGsL~~~L~~PEN--~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPEN--AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred EEEeecCCCcHHHHhcCccc--ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecc
Confidence 99999999999999987544 36799999999999999999999999 999999999999983 334 4799999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE 1155 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1155 (1237)
|.|+..+... .....+||..|.+||+... +.|+..+|.|||||++||++||..||.+........-..|.......
T Consensus 169 G~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp 245 (732)
T KOG4250|consen 169 GAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKP 245 (732)
T ss_pred cccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCC
Confidence 9999776433 5678899999999999985 78999999999999999999999999875433222222222111111
Q ss_pred cccccccC----------ccccCCCC-CHHHHHHHHHHHHhccccCCCCCC--CHHHHHHHHHhc
Q 000889 1156 KRINEILD----------PELTMQTS-DETELYQYLRISFECLDDRPFKRP--TMIQVMAMFKEL 1207 (1237)
Q Consensus 1156 ~~~~~~~~----------~~l~~~~~-~~~~~~~l~~li~~cl~~dP~~RP--t~~ell~~L~~l 1207 (1237)
..+.-... ..++.+.. .+.....+-+....++..+|++|. ...+....+..+
T Consensus 246 ~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 246 SGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred CceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 11100000 11111111 133445666777778888999998 555555555444
No 286
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.1e-32 Score=306.20 Aligned_cols=258 Identities=24% Similarity=0.396 Sum_probs=197.9
Q ss_pred CCCCceecccCCeEEEEEEEC----CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCC------
Q 000889 930 FSADSMIGSGGFGEVYKAQLR----DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE------ 997 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 997 (1237)
|++.+.||+|+||.||+|.+. .+..||+|.+.... ....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999864 36789999886432 223456888999999999999999999886532
Q ss_pred eEEEEEEeccCCCHHHHHhhhhc-CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAK-GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
..++++||+++|+|.+++..... .....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 24788999999999998754321 1223578899999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhh
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHRE 1155 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1155 (1237)
|+++...............+++.|++||.+....++.++||||||+++|||++ |+.||..... .....+ ....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~---~~~~ 231 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNY---LIKG 231 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHH---HHcC
Confidence 99986643332222233445678999999988889999999999999999999 8888764321 111111 1111
Q ss_pred cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1156 KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1156 ~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
.. .... ......+.+++.+|++.+|++||++.++++.|+.+
T Consensus 232 ~~--------~~~~---~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NR--------LKQP---PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred Cc--------CCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10 0000 11224677889999999999999999999999875
No 287
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.6e-32 Score=302.16 Aligned_cols=251 Identities=29% Similarity=0.491 Sum_probs=199.2
Q ss_pred CCCCceecccCCeEEEEEEECC-----CCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 930 FSADSMIGSGGFGEVYKAQLRD-----GSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
+++.+.||+|+||.||+|++.+ +..||+|++...... ..+.+..|++++++++||||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 4567889999999999999874 378999988654332 4567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++...
T Consensus 81 e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred eccCCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence 99999999999976432 1289999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
....... ....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||.... . ............
T Consensus 155 ~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~---~---~~~~~~~~~~~~----- 222 (258)
T smart00219 155 DDDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS---N---EEVLEYLKKGYR----- 222 (258)
T ss_pred ccccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC---H---HHHHHHHhcCCC-----
Confidence 4422211 12336789999999988889999999999999999998 788876421 1 111111111111
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
...... ...++.+++.+|+..+|++|||+.++++.|
T Consensus 223 ---~~~~~~---~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 ---LPKPEN---CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---CCCCCc---CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 000111 234577888899999999999999998764
No 288
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.3e-32 Score=310.47 Aligned_cols=261 Identities=23% Similarity=0.370 Sum_probs=197.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
++|++.++||+|+||.||+|.++ +++.||+|++...... ..+.+.+|+++++.++||||+++++++..+...++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888899999999999999987 4889999987643222 24567889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|++++++.++.... ..+++..+..++.|+++|++|||+. +++||||+|+||++++++.+|++|||++.....
T Consensus 81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 81 FVDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred cCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 99999888876532 3589999999999999999999999 999999999999999999999999999986544
Q ss_pred CCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc-----
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI----- 1158 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 1158 (1237)
... ......++..|+|||++.+ ..++.++||||||+++|||++|++||..... ...+..........
T Consensus 153 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 225 (286)
T cd07846 153 PGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-----IDQLYHIIKCLGNLIPRHQ 225 (286)
T ss_pred Ccc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-----HHHHHHHHHHhCCCchhhH
Confidence 322 1233557889999999875 4578899999999999999999999864321 11111100000000
Q ss_pred ---------ccccCccccCCC----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 ---------NEILDPELTMQT----SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ---------~~~~~~~l~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.....+...... ..+.....+.+++.+||+.+|++||++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 226 EIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000000 001123457789999999999999999999864
No 289
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.2e-32 Score=305.60 Aligned_cols=239 Identities=24% Similarity=0.408 Sum_probs=185.7
Q ss_pred eecccCCeEEEEEEECC--------CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 935 MIGSGGFGEVYKAQLRD--------GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.||+|+||.||+|.... ...+|+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 68999999999998752 2247777765433334457888999999999999999999999989999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCc--------eEEeeccc
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFE--------ARVSDFGM 1078 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~--------vkl~DfGl 1078 (1237)
++|+|.++++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++. ++++|||.
T Consensus 82 ~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 82 KFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999997642 3678999999999999999999999 9999999999999987665 69999999
Q ss_pred ceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCC-CCCCCCCCCCCchHHHHHHHHhhhc
Q 000889 1079 ARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGK-RPIDPSEFGDDNNLVGWAKQLHREK 1156 (1237)
Q Consensus 1079 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 1156 (1237)
+...... ....++..|+|||++.+ ..++.++||||||+++|||++|. .||..... ........ .
T Consensus 155 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~------~~~~~~~~--~ 220 (258)
T cd05078 155 SITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS------QKKLQFYE--D 220 (258)
T ss_pred ccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH------HHHHHHHH--c
Confidence 8654321 23467889999999986 45789999999999999999995 55442211 00001000 0
Q ss_pred ccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1157 RINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1157 ~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
...++ .. ...++.+++.+||+.+|++|||+.++++.|+
T Consensus 221 ------~~~~~--~~---~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 ------RHQLP--AP---KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ------cccCC--CC---CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 01111 11 1135678888999999999999999998763
No 290
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.1e-32 Score=311.49 Aligned_cols=273 Identities=28% Similarity=0.406 Sum_probs=213.7
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
|+..+.||+|+||.||+|+.. ++..||+|++...... ....+.+|++++++++|||++++++++..++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666788999999999999976 5789999988643222 234688899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
++ |++.+++... ...+++..+..++.+++.|+.|||+. +|+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 107 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred CC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 97 5787776543 24689999999999999999999999 9999999999999999999999999998754321
Q ss_pred CcceeeeccccCCCcCCccccC---ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQ---SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
....|++.|+|||++. +..++.++|||||||++|||++|+.||.... ..... ........
T Consensus 179 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~-~~~~~~~~----- 241 (317)
T cd06635 179 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSAL-YHIAQNES----- 241 (317)
T ss_pred ------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc-----HHHHH-HHHHhccC-----
Confidence 2346888999999973 4568899999999999999999999986421 11111 11111100
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCCCCCccCchhhHHHHHHHh
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGDSLDSFSLKDTVIEELRER 1232 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1232 (1237)
+.. ........+.+++.+|++.+|.+||++.+++++...+....+....+...+.+++.++++..
T Consensus 242 -~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (317)
T cd06635 242 -PTL----QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPETVLIDLIQRTKDAVRELDNL 306 (317)
T ss_pred -CCC----CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcccchhhHHHHHHHHHHHHhhh
Confidence 000 01112235678888999999999999999999998888777776667777777777776654
No 291
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.3e-32 Score=306.26 Aligned_cols=256 Identities=29% Similarity=0.433 Sum_probs=199.2
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEEeCC------
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGE------ 997 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~------ 997 (1237)
++++|++.+.||+|+||.||+|+.+ +++.+++|.+.... ...+.+.+|+.+++++ +||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4678999999999999999999986 56789999875433 3456788999999999 6999999999997644
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
..++||||+++++|.++++.... ....+++..+..++.|+++|++|||+. +++|+||+|+||++++++.+|++|||
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 48999999999999999876431 135789999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccCc-----cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHH
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQS-----FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQL 1152 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1152 (1237)
++........ ......|+..|+|||++.. ..++.++||||+|+++|+|++|+.||..... ...... .
T Consensus 159 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~-~ 230 (275)
T cd06608 159 VSAQLDSTLG--RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-----MRALFK-I 230 (275)
T ss_pred cceecccchh--hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-----HHHHHH-h
Confidence 9976543221 2234568899999998753 3467889999999999999999999863211 111111 0
Q ss_pred hhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1153 HREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1153 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. ....+... ........+.+++.+|+..||++|||+.+++++
T Consensus 231 ~------~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 231 P------RNPPPTLK---SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred h------ccCCCCCC---chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0 00011111 111133467788999999999999999999863
No 292
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-34 Score=290.10 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=194.7
Q ss_pred CceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHH-hcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 933 DSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIG-KIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
...||.|+||+|++..++ .|+..|||++..... .+.+++..|.+... .-++||||++||.+-.++..|+.||.|+ .
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-I 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-h
Confidence 346999999999999887 589999999975544 33456777887644 4479999999999988999999999997 6
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcce
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHL 1089 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~ 1089 (1237)
+++.+......-....+++...-.|....+.||.||-... .|+||||||+|||++..|.||+||||.+..+.. ..
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~---Si 222 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD---SI 222 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH---HH
Confidence 7776654332222357888888899999999999999886 899999999999999999999999999875532 22
Q ss_pred eeeccccCCCcCCccccCc--cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1090 SVSTLAGTPGYVPPEYYQS--FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1090 ~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
..+..+|...|||||.+.. ..|+-+|||||+|+++||+.||..||.. |.....+-..+..--.|.+.
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~-----------w~svfeql~~Vv~gdpp~l~ 291 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK-----------WDSVFEQLCQVVIGDPPILL 291 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch-----------HHHHHHHHHHHHcCCCCeec
Confidence 3355678999999999863 3589999999999999999999999862 33322222221111111222
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
....+......+.+++.-|+.+|-.+||.+.++.++
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 222223344567888889999999999999999876
No 293
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.6e-32 Score=304.32 Aligned_cols=254 Identities=25% Similarity=0.415 Sum_probs=202.1
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|+..+.||+|+||.||+|.++ +++.+|+|++.... ....+++.+|++++++++||||+++++++......++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777889999999999999987 57889999886543 23345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHH-SCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
+++++|.+++.... ..+++....+++.|+++|++|+|+ . +++||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 81 MDGGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred cCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 99999999987642 468889999999999999999999 7 999999999999999999999999999875532
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
... ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... .............. .+
T Consensus 154 ~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~------~~ 222 (265)
T cd06605 154 SLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIVNEP------PP 222 (265)
T ss_pred HHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHhcCC------CC
Confidence 211 12568889999999998899999999999999999999999986542111 11111111111110 01
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... .......+.+++.+|+..+|++|||+.+++++
T Consensus 223 ~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 223 RLP----SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCC----hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 111 01123457788899999999999999999865
No 294
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-31 Score=304.47 Aligned_cols=262 Identities=26% Similarity=0.356 Sum_probs=200.7
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 1003 (1237)
++|+..+.||.|++|.||+|.+. +++.+|+|.+..... .....+.+|++++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999986 578889998764322 2345688999999999999999999988653 4689999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++++|.+++..... ....+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 81 EYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999999998865432 235678899999999999999999999 99999999999999999999999999987543
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.... ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||........ ............. .... .
T Consensus 157 ~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~-~~~~-~ 229 (287)
T cd06621 157 NSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL-GPIELLSYIVNMP-NPEL-K 229 (287)
T ss_pred cccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC-ChHHHHHHHhcCC-chhh-c
Confidence 2211 234578899999999988999999999999999999999999986532111 1111111111111 0010 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.... ........+.+++.+|++.+|.+|||+.|++++
T Consensus 230 ~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 230 DEPG---NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred cCCC---CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0000 001123457789999999999999999999985
No 295
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-34 Score=342.96 Aligned_cols=253 Identities=28% Similarity=0.385 Sum_probs=198.0
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
+-+|+...+||.|.||.||-|... +|+..|+|-+.-.. ....+.+.+|+.++..++|||+|++||+-.+.+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 346778889999999999999865 58888999775322 223346788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
|||++|+|.+.++.. +..++.....+..|++.|++|||+. |||||||||.||+++.+|.+|.+|||.|..+.
T Consensus 1314 EyC~~GsLa~ll~~g-----ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHG-----RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHhccCcHHHHHHhc-----chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEec
Confidence 999999999999763 3567777788899999999999999 99999999999999999999999999998876
Q ss_pred cCCc--ceeeeccccCCCcCCccccCcc---ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1084 ALDT--HLSVSTLAGTPGYVPPEYYQSF---RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1084 ~~~~--~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
.... ........||+.|||||++.+. ....++||||+|||+.||+||++||.... ..+.-+.. ...+..
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d----ne~aIMy~--V~~gh~ 1459 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD----NEWAIMYH--VAAGHK 1459 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc----chhHHHhH--HhccCC
Confidence 5321 1223467899999999999753 46678999999999999999999997432 12221111 111111
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
|.++.. -.. +=.+++.+|+..||+.|+++.|++++
T Consensus 1460 -----Pq~P~~--ls~---~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1460 -----PQIPER--LSS---EGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -----CCCchh--hhH---hHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 222111 122 23356679999999999999988865
No 296
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.1e-32 Score=309.45 Aligned_cols=261 Identities=26% Similarity=0.331 Sum_probs=199.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999986 68899999886433 23346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+ +++|.+++.... ..+++..++.++.|+++||+|||+. +++|+||||+||+++.++.++++|||++......
T Consensus 81 ~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 81 M-PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred c-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 9 999999987542 4689999999999999999999999 9999999999999999999999999999866543
Q ss_pred CcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc-------
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR------- 1157 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 1157 (1237)
.. .......++..|+|||++.+. .++.++||||+|+++|||++|.+||..... ...+.........
T Consensus 153 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07832 153 EP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-----IEQLAIVFRTLGTPNEETWP 226 (286)
T ss_pred CC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-----HHHHHHHHHHcCCCChHHHh
Confidence 22 122345688999999998654 468899999999999999999887754321 1111111100000
Q ss_pred -------ccccc---CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1158 -------INEIL---DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1158 -------~~~~~---~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
...+. ..........+.....+.+++.+|++.+|++|||+.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 227 GLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 00000000001122567788999999999999999999875
No 297
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.1e-31 Score=299.55 Aligned_cols=249 Identities=23% Similarity=0.399 Sum_probs=198.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|+..+.||+|+||.||+|... +++.+|+|++.... ......+.+|++++++++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788899999999999999875 57889999886432 23345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC-CceEEeecccceeecc
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN-FEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~-~~vkl~DfGla~~~~~ 1084 (1237)
+++++|.+++.... +..+++..+.+++.++++|++|||++ +++||||||+||+++.+ +.+|++|||.+.....
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 81 APGGTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred CCCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 99999999997643 24689999999999999999999999 99999999999999854 4689999999986643
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ......... ....
T Consensus 155 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~------~~~~~~~~~-~~~~---- 220 (256)
T cd08220 155 KSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP------ALVLKIMSG-TFAP---- 220 (256)
T ss_pred Ccc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH------HHHHHHHhc-CCCC----
Confidence 221 12356888999999999888999999999999999999999998653211 111111111 0000
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. . .....+.+++.+||+.+|++|||+.+++++
T Consensus 221 -~~--~---~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 221 -IS--D---RYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -CC--C---CcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 00 0 122356788889999999999999999875
No 298
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-33 Score=302.25 Aligned_cols=201 Identities=29% Similarity=0.438 Sum_probs=177.6
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
.+.|+.-++||+|+||.||-++.+ +|+.+|.|++.+.. ...+.....|-.++++++.+.||.+-.+|++.+..|+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 456788889999999999999876 58899998875422 23445578899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|..|.||+|.-++.... ...+++..+..++.+|+.||++||.. +||+||+||+|||+|+.|+|+|+|.|+|..+
T Consensus 264 LtlMNGGDLkfHiyn~g---~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHG---NPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEeecCCceeEEeeccC---CCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEec
Confidence 99999999988876542 25789999999999999999999999 9999999999999999999999999999987
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCC
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDP 1136 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~ 1136 (1237)
..... ....+||.+|||||++.++.|+...|+||+||++|||+.|+.||..
T Consensus 338 ~~g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 338 PEGKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred CCCCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 65443 3456899999999999999999999999999999999999999964
No 299
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.98 E-value=9.9e-32 Score=310.08 Aligned_cols=206 Identities=25% Similarity=0.371 Sum_probs=172.1
Q ss_pred CCCCCceecccCCeEEEEEEECC---CCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD---GSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EERL 1000 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 1000 (1237)
+|++.+.||+|+||.||+|+... +..||+|.+.... ....+.+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 47888999999999999999864 7899999887532 33345678899999999999999999999888 7899
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC----CCceEEeec
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE----NFEARVSDF 1076 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~----~~~vkl~Df 1076 (1237)
+||||++ +++.+++..........+++..++.++.|++.|++|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999997 5777777654443334789999999999999999999999 9999999999999999 999999999
Q ss_pred ccceeeccCCc-ceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCC
Q 000889 1077 GMARLVNALDT-HLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSE 1138 (1237)
Q Consensus 1077 Gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~ 1138 (1237)
|+++....... ........++..|+|||++.+. .++.++||||||+++|||++|+.||....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 99986543222 1122345678899999988764 57899999999999999999999997544
No 300
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.98 E-value=5.7e-32 Score=306.80 Aligned_cols=248 Identities=24% Similarity=0.380 Sum_probs=197.7
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
|...+.||+|++|.||+|... +++.+++|++........+.+.+|+.++++++||||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444568999999999999875 6788999988644444455688999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+........
T Consensus 101 ~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~- 170 (285)
T cd06648 101 GALTDIVTH------TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP- 170 (285)
T ss_pred CCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-
Confidence 999999875 2578899999999999999999999 999999999999999999999999998865432211
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
......|++.|+|||++.+..++.++||||+|+++|||++|+.||..... .......... . .+....
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~------~~~~~~~~~~-~-----~~~~~~ 237 (285)
T cd06648 171 -RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP------LQAMKRIRDN-L-----PPKLKN 237 (285)
T ss_pred -ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHhc-C-----CCCCcc
Confidence 12335688999999999888899999999999999999999999864321 1111111111 0 011111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. ......+.+++.+|++.+|++|||+.+++++
T Consensus 238 ~---~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 238 L---HKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred c---ccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 1 1122357788889999999999999999964
No 301
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.98 E-value=8.1e-35 Score=323.35 Aligned_cols=373 Identities=29% Similarity=0.386 Sum_probs=214.4
Q ss_pred CCCCceeeccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCc
Q 000889 298 CGNLSVITLSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLR 377 (1237)
Q Consensus 298 l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~ 377 (1237)
++-.+-.++++|.+++..+|+.+..+++++.|.|...++. .+|.. ++.+.+|++|.+++|++. .+-.++.. ++.|+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeE-L~~lqkLEHLs~~HN~L~-~vhGELs~-Lp~LR 81 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEE-LSRLQKLEHLSMAHNQLI-SVHGELSD-LPRLR 81 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHH-HHHHhhhhhhhhhhhhhH-hhhhhhcc-chhhH
Confidence 4445556777777776667777777777777777666665 44443 355555666666665555 33333332 24555
Q ss_pred EEEcccCcCCCC-CCcCcccccccceeeccCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccC
Q 000889 378 ELDLSSNRLTGE-LPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSS 456 (1237)
Q Consensus 378 ~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~ 456 (1237)
.+++.+|++... +|..+..+..|..|||++|+++ ..|..+..-+++-+|+||+
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~--------------------------EvP~~LE~AKn~iVLNLS~ 135 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR--------------------------EVPTNLEYAKNSIVLNLSY 135 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhhhh--------------------------hcchhhhhhcCcEEEEccc
Confidence 555555555321 3444444555555555555544 4566666666777777777
Q ss_pred CcCcccCCCCCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCcCcceeecccccccC
Q 000889 457 NGFTGTIPSGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTG 536 (1237)
Q Consensus 457 N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 536 (1237)
|+|. .||..++ .++..|-.|+|++|++. .+|..+..+..|++|+|++|.+....-..+-.+++|+.|.+++.+-+
T Consensus 136 N~Ie-tIPn~lf--inLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT- 210 (1255)
T KOG0444|consen 136 NNIE-TIPNSLF--INLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT- 210 (1255)
T ss_pred Cccc-cCCchHH--HhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch-
Confidence 7776 4554443 34555555566666655 45555666666666666666655332223333444444444443322
Q ss_pred cccccccccCCCccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCccccCCCCCCC
Q 000889 537 EIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLG 616 (1237)
Q Consensus 537 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~ 616 (1237)
..-+|.++..+.+|..+|||.|.+. .+|+.+.++++|+.|+||+|+|+ .+--..+
T Consensus 211 -----------------------l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~ 265 (1255)
T KOG0444|consen 211 -----------------------LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEG 265 (1255)
T ss_pred -----------------------hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHH
Confidence 1134555555555555555555555 55555555555555555555555 3444444
Q ss_pred CCCCCCEEECCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCc
Q 000889 617 KCRSLVWLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPST 696 (1237)
Q Consensus 617 ~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1237)
...+|++|+||.|+|+ .+|..+..++
T Consensus 266 ~W~~lEtLNlSrNQLt-~LP~avcKL~----------------------------------------------------- 291 (1255)
T KOG0444|consen 266 EWENLETLNLSRNQLT-VLPDAVCKLT----------------------------------------------------- 291 (1255)
T ss_pred HHhhhhhhccccchhc-cchHHHhhhH-----------------------------------------------------
Confidence 4555555555555555 4555544432
Q ss_pred ceeccceeeeeccCCceeEEEccCCcCC-ccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCC
Q 000889 697 RIYTGMTMYTFTTNGSLIYLDLSYNSLS-GTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSI 775 (1237)
Q Consensus 697 ~~~~~~~~~~f~~~~~L~~LdLs~N~l~-g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~ 775 (1237)
+|+.|.+.+|+++ .-||.-+|.|.+|+++.+++|+|. ..|+.++...+|+.|.|++|++- .+
T Consensus 292 ---------------kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TL 354 (1255)
T KOG0444|consen 292 ---------------KLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TL 354 (1255)
T ss_pred ---------------HHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-ec
Confidence 2334444445443 136777777777777777777777 77777777777777777777776 67
Q ss_pred CCcccCcccccceecccccccccCCC
Q 000889 776 PGSLGGLSFLSDLDVSNNNLSGIIPS 801 (1237)
Q Consensus 776 p~~~~~l~~L~~l~l~~N~l~g~~p~ 801 (1237)
|+.+.-|+.|..|||.+|+=---||.
T Consensus 355 PeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 355 PEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred hhhhhhcCCcceeeccCCcCccCCCC
Confidence 77777777777777777754444443
No 302
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.98 E-value=6.1e-32 Score=308.99 Aligned_cols=263 Identities=25% Similarity=0.310 Sum_probs=197.6
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc-----CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ-----GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
+|+..+.||+|+||.||+|... +++.||+|++...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999976 5889999998654322 234567899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+ +|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~e~~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~ 152 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSF 152 (298)
T ss_pred Eccc-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence 9999 899999987532 3689999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh-------
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR------- 1154 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 1154 (1237)
...... .....+++.|+|||.+.+ ..++.++|||||||++|||++|.+||...... ..+.........
T Consensus 153 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 153 GSPNRK--MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI--DQLGKIFEALGTPTEENWP 228 (298)
T ss_pred cCCCcc--ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH--HHHHHHHHHcCCCchhhhh
Confidence 543221 223456788999998864 45788999999999999999998777643211 111111000000
Q ss_pred -hcccccccCccccCCC----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1155 -EKRINEILDPELTMQT----SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1155 -~~~~~~~~~~~l~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
................ ........+.+++.+|++++|++|||+.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000000000 001123467789999999999999999999985
No 303
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.98 E-value=3.6e-32 Score=303.06 Aligned_cols=247 Identities=27% Similarity=0.436 Sum_probs=196.1
Q ss_pred CCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
++|++.+.||+|+||.||++.. .++.||+|+.... ...+.+.+|+.++++++|||++++++++.. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCC
Confidence 3588899999999999999976 4788999987532 234678899999999999999999999865 45799999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.+++.... ...+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 82 ~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 82 KGNLVNFLRTRG---RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred CCCHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 999999997642 24678999999999999999999999 99999999999999999999999999997543211
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
.....+..|+|||++.+..++.++||||+|+++|||++ |+.||..... ............ ...
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~~~~------~~~ 218 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL------KEVKECVEKGYR------MEP 218 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH------HHHHHHHhCCCC------CCC
Confidence 12234568999999988889999999999999999997 9999864321 111111111100 000
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
. ......+.+++.+||+.+|++||++.++++.|++
T Consensus 219 --~---~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 --P---EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --C---CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0 1122456788889999999999999999998763
No 304
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.98 E-value=6.7e-32 Score=303.02 Aligned_cols=251 Identities=21% Similarity=0.332 Sum_probs=193.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-----cCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-----QGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EER 999 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 999 (1237)
++|++.+.||+|+||.||+|+.. ++..||+|++..... ...+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999876 488999998753221 1134678899999999999999999988763 467
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||+++++|.+++... ..+++....+++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~ 153 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGAS 153 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccc
Confidence 8999999999999998753 3578888899999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc-eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1080 RLVNALDTH-LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1080 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+........ .......++..|+|||++.+..++.++||||||+++|||++|+.||.... ....... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-----~~~~~~~-~~~~~-- 225 (265)
T cd06652 154 KRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE-----AMAAIFK-IATQP-- 225 (265)
T ss_pred cccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc-----hHHHHHH-HhcCC--
Confidence 765432111 11233458889999999988889999999999999999999999986321 1111111 10000
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+. ........+..++.+|+. +|++||++.+++++
T Consensus 226 ---~~~~-----~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 226 ---TNPV-----LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ---CCCC-----CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0111 112223456677788884 89999999999864
No 305
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.98 E-value=4.7e-32 Score=308.81 Aligned_cols=265 Identities=23% Similarity=0.344 Sum_probs=195.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.+.||+|+||.||+|+.+ +++.||+|.+..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999987 578999998864322 2234567899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
++ ++|.+++.... ..+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~-~~L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 85 LD-TDLKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred CC-CCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 98 59999886532 3678999999999999999999999 9999999999999999999999999998754321
Q ss_pred CcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh--hcc-----
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR--EKR----- 1157 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~----- 1157 (1237)
.. ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||...... ........+.... ...
T Consensus 157 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 157 SK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV-EDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred Cc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH-HHHHHHHHHhcCCCChhhhhhhh
Confidence 11 1123346789999999875 45788999999999999999999999643210 0000000000000 000
Q ss_pred -cccccC--------ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1158 -INEILD--------PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1158 -~~~~~~--------~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
...... ...............+.+++.+|++.+|++|||+.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 000000 0000000000011456688899999999999999998753
No 306
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.98 E-value=3e-32 Score=309.92 Aligned_cols=265 Identities=25% Similarity=0.330 Sum_probs=199.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
++|++.+.||+|+||.||+|+++ +++.||+|++.... ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999987 47889999876432 2234678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|++++.+..+.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 81 YVERTLLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred cCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 99987776655432 3578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh----------
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH---------- 1153 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---------- 1153 (1237)
... .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||...... ...........
T Consensus 153 ~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 153 RPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI--DQLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred Ccc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHhhhc
Confidence 332 122345678899999999887 7899999999999999999999998743211 11110000000
Q ss_pred -hhcccc-----cccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1154 -REKRIN-----EILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 -~~~~~~-----~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
...... ...++.............++.+++.+||..+|++||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000000 00000000000001113567889999999999999999999863
No 307
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.98 E-value=4.1e-35 Score=342.69 Aligned_cols=462 Identities=28% Similarity=0.352 Sum_probs=375.5
Q ss_pred CCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCCCceee
Q 000889 226 LNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVIT 305 (1237)
Q Consensus 226 L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 305 (1237)
++.|+++.|-+-...-+...++-+|+.||||+|++. ..|... ....+|+.|+++.|-|.... .....+.+|++|.
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~i--t~l~~L~~ln~s~n~i~~vp--~s~~~~~~l~~ln 97 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQI--TLLSHLRQLNLSRNYIRSVP--SSCSNMRNLQYLN 97 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchh--hhHHHHhhcccchhhHhhCc--hhhhhhhcchhhe
Confidence 778888888765443444556667999999999987 455443 34578999999999887433 4578899999999
Q ss_pred ccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEEEcccCc
Q 000889 306 LSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLRELDLSSNR 385 (1237)
Q Consensus 306 L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~ 385 (1237)
|.+|++. ..|..+..+++|++|++|.|.+. .+|.. +..+..+..+..++|... ..+++ ..++.++|..|.
T Consensus 98 L~~n~l~--~lP~~~~~lknl~~LdlS~N~f~-~~Pl~-i~~lt~~~~~~~s~N~~~----~~lg~--~~ik~~~l~~n~ 167 (1081)
T KOG0618|consen 98 LKNNRLQ--SLPASISELKNLQYLDLSFNHFG-PIPLV-IEVLTAEEELAASNNEKI----QRLGQ--TSIKKLDLRLNV 167 (1081)
T ss_pred eccchhh--cCchhHHhhhcccccccchhccC-CCchh-HHhhhHHHHHhhhcchhh----hhhcc--ccchhhhhhhhh
Confidence 9999984 47899999999999999999998 56654 567888999999999322 12222 238889999999
Q ss_pred CCCCCCcCcccccccceeeccCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCC
Q 000889 386 LTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPS 465 (1237)
Q Consensus 386 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 465 (1237)
+.+.++..+..++. .|+|.+|.+. ......+.+|+.|.+..|+++... -.-++|+.|+.++|.++...+.
T Consensus 168 l~~~~~~~i~~l~~--~ldLr~N~~~----~~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~ 237 (1081)
T KOG0618|consen 168 LGGSFLIDIYNLTH--QLDLRYNEME----VLDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH 237 (1081)
T ss_pred cccchhcchhhhhe--eeecccchhh----hhhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeeccc
Confidence 99888888888877 8999999986 245678899999999999988442 2357899999999999844332
Q ss_pred CCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCcCcceeecccccccCccccccccc
Q 000889 466 GFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVN 545 (1237)
Q Consensus 466 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~ 545 (1237)
..-.+|+.++++.|+++ .+|.+++.+.+|+.|+..+|+++ .+|..+..+.+|+.|.+.+|.+. .+|+.. ..
T Consensus 238 -----p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~l-e~ 308 (1081)
T KOG0618|consen 238 -----PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFL-EG 308 (1081)
T ss_pred -----cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcc-cc
Confidence 23468999999999999 45699999999999999999997 89999999999999999999999 676644 45
Q ss_pred CCCccEEEcccccccccccccc-ccCC-CccEEEeecccccccCCcc-ccCccccceEEecCCccccCCCCCCCCCCCCC
Q 000889 546 GGNLETLILNNNHLTGAIPKSI-ASCT-NMLWVSLSSNQLTGEIPAG-IGNLVKLAILQLGNNSLTGQVPQGLGKCRSLV 622 (1237)
Q Consensus 546 l~~L~~L~Ls~N~l~~~~p~~~-~~l~-~L~~L~Ls~N~l~~~~p~~-~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 622 (1237)
++.|++|+|..|+|. ..|+.+ .-+. +|..|+.+.|++. ..|.. =..++.|+.|.+.+|.++...-+.+.+...|+
T Consensus 309 ~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLK 386 (1081)
T KOG0618|consen 309 LKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLK 386 (1081)
T ss_pred cceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhcccccee
Confidence 789999999999999 555544 3333 3788999999998 55522 23467899999999999988888899999999
Q ss_pred EEECCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCcceeccc
Q 000889 623 WLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGM 702 (1237)
Q Consensus 623 ~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (1237)
.|+|++|+|. ++|...-
T Consensus 387 VLhLsyNrL~-~fpas~~-------------------------------------------------------------- 403 (1081)
T KOG0618|consen 387 VLHLSYNRLN-SFPASKL-------------------------------------------------------------- 403 (1081)
T ss_pred eeeecccccc-cCCHHHH--------------------------------------------------------------
Confidence 9999999997 6665421
Q ss_pred eeeeeccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCC-CCCcccC
Q 000889 703 TMYTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGS-IPGSLGG 781 (1237)
Q Consensus 703 ~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~-~p~~~~~ 781 (1237)
..+..|++|+||+|+|+ .+|.++..+..|++|...+|++. ..| .+..+++|+++|+|.|+|+.. +|...-.
T Consensus 404 -----~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~ 475 (1081)
T KOG0618|consen 404 -----RKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS 475 (1081)
T ss_pred -----hchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC
Confidence 12236899999999998 89999999999999999999999 788 899999999999999999853 4544433
Q ss_pred cccccceecccccc
Q 000889 782 LSFLSDLDVSNNNL 795 (1237)
Q Consensus 782 l~~L~~l~l~~N~l 795 (1237)
++|++|||++|.-
T Consensus 476 -p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 476 -PNLKYLDLSGNTR 488 (1081)
T ss_pred -cccceeeccCCcc
Confidence 8999999999974
No 308
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.98 E-value=8.7e-35 Score=323.09 Aligned_cols=363 Identities=27% Similarity=0.399 Sum_probs=279.5
Q ss_pred CEEEccCCCCC-chhhhhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCCCceee
Q 000889 227 NLLNFSDNKLP-GKLNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVIT 305 (1237)
Q Consensus 227 ~~L~Ls~n~l~-~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 305 (1237)
+-.|+++|.++ +..|.....+++++.|.|....+. .+|..+. .+.+|++|.+++|+++... ..+..++.|+.+.
T Consensus 10 rGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~--~lqkLEHLs~~HN~L~~vh--GELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 10 RGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELS--RLQKLEHLSMAHNQLISVH--GELSDLPRLRSVI 84 (1255)
T ss_pred ecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHH--HHhhhhhhhhhhhhhHhhh--hhhccchhhHHHh
Confidence 33455555554 235555555566666666555554 4444442 2456677777777665322 2456788899999
Q ss_pred ccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEEEcccCc
Q 000889 306 LSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLRELDLSSNR 385 (1237)
Q Consensus 306 L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~ 385 (1237)
+..|++...++|..+..+..|+.||||+|++. ..|.. +..-+++-.|+|++|+|. .||..++-.+..|-.||||+|+
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~-LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTN-LEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchh-hhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccch
Confidence 99999988889999999999999999999998 66664 567789999999999998 9999999988999999999999
Q ss_pred CCCCCCcCcccccccceeeccCccccCcccchhccccccceEEeccCCCCC-CCCCccCCCCCCCcEEEccCCcCcccCC
Q 000889 386 LTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNIS-GPVPLSLTNCTQLRVLDLSSNGFTGTIP 464 (1237)
Q Consensus 386 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 464 (1237)
+. .+|..+..+..|++|+|++|.+. .+....+..+++|+.|.+++.+-+ ..+|.++..+.+|+.+|+|.|.+. .+|
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~-hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vP 238 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLN-HFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVP 238 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhh-HHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cch
Confidence 98 67778899999999999999886 233344566778888888886544 467889999999999999999988 677
Q ss_pred CCCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCcCcceeeccccccc-Cccccccc
Q 000889 465 SGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLT-GEIPEGIC 543 (1237)
Q Consensus 465 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~ip~~~~ 543 (1237)
+.+ -++++|+.|+|++|+|+ .+....+.+.+|++|+||.|+++ .+|.++.+|++|+.|.+.+|++. .-||.++
T Consensus 239 ecl---y~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGI- 312 (1255)
T KOG0444|consen 239 ECL---YKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGI- 312 (1255)
T ss_pred HHH---hhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccch-
Confidence 766 36788899999999988 45556777888999999999998 88999999999999999888876 2466666
Q ss_pred ccCCCccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCccc
Q 000889 544 VNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLT 608 (1237)
Q Consensus 544 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~ 608 (1237)
..+.+|+.+..++|.+. .+|+.++.|..|+.|.|+.|++. .+|+.|.-|+.|+.|||.+|.-.
T Consensus 313 GKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 313 GKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 45667777777777777 77777777777777777777777 67777777777777777777543
No 309
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.98 E-value=7.6e-32 Score=306.75 Aligned_cols=245 Identities=25% Similarity=0.338 Sum_probs=198.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++..+...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999986 57899999886432 223456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 81 EYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 999999999998764 4688999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.. .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ....+.. .. ..
T Consensus 153 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~-~~-~~------- 213 (290)
T cd05580 153 GR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEK-IL-EG------- 213 (290)
T ss_pred CC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHH-Hh-cC-------
Confidence 32 234568899999999988888999999999999999999999986433 1111111 11 11
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
....+... ...+.+++.+||..+|.+|| ++.+++++
T Consensus 214 -~~~~~~~~---~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 214 -KVRFPSFF---SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred -CccCCccC---CHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 11111111 23566788899999999999 77777755
No 310
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.98 E-value=9.2e-32 Score=304.03 Aligned_cols=248 Identities=23% Similarity=0.378 Sum_probs=198.0
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc-cCcCHHHHHHHHHHHHhcC---CCCcccccceEEeCCeEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV-TGQGDREFMAEMETIGKIK---HRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.|+..+.||+|+||.||+|.+. ++..||+|.+... ......++.+|+.++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4777889999999999999975 6889999987543 2334456888999999997 999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++++|.++++. ..+++..+..++.|+++|+.|||+. +++||||+|+||+++.++.++++|||++....
T Consensus 82 e~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 82 EYAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred ecCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999998864 2688999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.... ......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ... ......
T Consensus 153 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~------~~~------~~~~~~ 218 (277)
T cd06917 153 QNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR------AMM------LIPKSK 218 (277)
T ss_pred CCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh------hhh------ccccCC
Confidence 4332 1234568899999998865 446889999999999999999999997543211 000 000001
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+.+... ....++.+++.+|++.+|++||++.+++++
T Consensus 219 ~~~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 219 PPRLEDN----GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCCcc----cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 1111110 123457788889999999999999999875
No 311
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.98 E-value=5.9e-32 Score=307.95 Aligned_cols=264 Identities=23% Similarity=0.287 Sum_probs=195.3
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++++|++.+.||+|+||.||+|... +++.||+|.+..... .....+.+|++++++++|+||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3467999999999999999999875 588999998864332 22346788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+. +++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 83 EYMH-TDLAQYMIQHP----GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred eccc-CCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 9996 77777765431 3567888889999999999999999 99999999999999999999999999997543
Q ss_pred cCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh---------
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH--------- 1153 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--------- 1153 (1237)
..... .....+++.|+|||++.+. .++.++||||+|+++|||++|+.||..... ..........
T Consensus 155 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~----~~~~~~~~~~~~~~~~~~~ 228 (291)
T cd07870 155 IPSQT--YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD----VFEQLEKIWTVLGVPTEDT 228 (291)
T ss_pred CCCCC--CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh----HHHHHHHHHHHcCCCChhh
Confidence 32211 2334578899999998754 578899999999999999999999974321 1111000000
Q ss_pred -----hh-cccccccC----ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1154 -----RE-KRINEILD----PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 -----~~-~~~~~~~~----~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. ........ ...............+.+++.+|+..||.+|||+.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 229 WPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 00 00000000 0000000000112356678889999999999999998854
No 312
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.98 E-value=1e-31 Score=301.22 Aligned_cols=253 Identities=29% Similarity=0.445 Sum_probs=199.6
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999876 6789999988654332 456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++... ..+++..+..++.+++.|++|||+. +|+|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 81 CSGGTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred CCCCcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 9999999998753 3578889999999999999999999 9999999999999999999999999999876543
Q ss_pred Cccee--eeccccCCCcCCccccCccc---cCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1086 DTHLS--VSTLAGTPGYVPPEYYQSFR---CTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1086 ~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
..... .....+++.|+|||++.+.. ++.++||||||+++||+++|+.||..... .. ........ .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~----~~-~~~~~~~~-~---- 222 (264)
T cd06626 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN----EF-QIMFHVGA-G---- 222 (264)
T ss_pred CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc----hH-HHHHHHhc-C----
Confidence 32211 12356788999999998766 88999999999999999999999964321 11 11111010 0
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+.++.. ......+.+++.+|++.+|++|||+.+++++
T Consensus 223 -~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 223 -HKPPIPDS---LQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred -CCCCCCcc---cccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11111111 1112345678889999999999999998753
No 313
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=3.8e-32 Score=330.32 Aligned_cols=273 Identities=18% Similarity=0.224 Sum_probs=188.2
Q ss_pred HhCCCCCCceecccCCeEEEEEEECC--CCEEEEEE--------------ec---cccCcCHHHHHHHHHHHHhcCCCCc
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLRD--GSVVAIKK--------------LI---HVTGQGDREFMAEMETIGKIKHRNL 986 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~--------------~~---~~~~~~~~~~~~E~~~l~~l~h~ni 986 (1237)
..++|++.+.||+|+||+||++..+. +..+++|. +. .........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45689999999999999999987642 22222220 11 1111123457889999999999999
Q ss_pred ccccceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC
Q 000889 987 VPLLGYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD 1066 (1237)
Q Consensus 987 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~ 1066 (1237)
+++++++...+..++|+|++. +++.+++...............+..++.|++.||+|||+. +||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999985 6777777543222122334566778999999999999999 999999999999999
Q ss_pred CCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCC-CCCCCCCCCchH
Q 000889 1067 ENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRP-IDPSEFGDDNNL 1145 (1237)
Q Consensus 1067 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p-~~~~~~~~~~~~ 1145 (1237)
.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|..+ |..........+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 9999999999999876543222 12345799999999999998999999999999999999998764 332211111111
Q ss_pred HHHHHHHhh-hccc-------ccccC-ccccCCC-CCHH------HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1146 VGWAKQLHR-EKRI-------NEILD-PELTMQT-SDET------ELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1146 ~~~~~~~~~-~~~~-------~~~~~-~~l~~~~-~~~~------~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
......... ...+ ...++ ....... ..+. ....+.+++.+|++.||.+|||+.|++++
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 111110000 0000 00000 0000000 0000 11245667889999999999999999875
No 314
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.98 E-value=1.1e-31 Score=300.97 Aligned_cols=252 Identities=23% Similarity=0.386 Sum_probs=199.3
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEe--CCeEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKI--GEERLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 1003 (1237)
+|++.+.||.|+||.||+|.+. ++..||+|.+.... ....+.+..|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778899999999999999875 57889999875322 2234567889999999999999999998754 45679999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHH-----hcCCCCeeecCCCCCCeeeCCCCceEEeeccc
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLH-----HSCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1078 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-----~~~~~~ivHrDikp~NIll~~~~~vkl~DfGl 1078 (1237)
||+++++|.+++..... ....+++..++.++.|+++|++||| +. +++|+||||+||+++.++.+|++|||+
T Consensus 81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 81 EYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred hhccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccc
Confidence 99999999999976432 2457899999999999999999999 66 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1079 ARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1079 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+......... .....+++.|+|||++.+..++.++||||||+++|+|++|+.||.... ...+..... ....
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~-~~~~ 227 (265)
T cd08217 157 AKILGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN------QLQLASKIK-EGKF 227 (265)
T ss_pred cccccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC------HHHHHHHHh-cCCC
Confidence 9876543221 234568999999999998889999999999999999999999997533 111111111 1111
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+.++ ......+.+++.+|++.+|++||++.+++++
T Consensus 228 -----~~~~-----~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 -----RRIP-----YRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----CCCc-----cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1111 1122467788889999999999999999875
No 315
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.98 E-value=9.9e-32 Score=304.97 Aligned_cols=262 Identities=23% Similarity=0.314 Sum_probs=196.1
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|+..+.||+|+||.||+|+.. ++..||+|++.... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999886 58899999886332 22335688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+. ++|.+++.... ...+++..+..++.|+++|++|||+. +++||||+|+||+++.++.+|++|||+++.....
T Consensus 81 ~~-~~l~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 81 LH-QDLKKFMDASP---LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred cc-cCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 96 68988886542 24689999999999999999999999 9999999999999999999999999998755432
Q ss_pred CcceeeeccccCCCcCCccccCccc-cCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh---------
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFR-CTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--------- 1155 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------- 1155 (1237)
.. ......++..|+|||++.+.. ++.++||||||+++|||++|+.||...... .............
T Consensus 154 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 154 VR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred cc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhhhhhh
Confidence 21 123345688999999887644 588899999999999999999999643211 1111111100000
Q ss_pred ------cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1156 ------KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1156 ------~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+.......+... .+.....+.+++.+|++.||.+|||+.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKV--VPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHHhhcccccccCHHHH--cccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000000000000 00011345678899999999999999999864
No 316
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.98 E-value=1.7e-31 Score=299.50 Aligned_cols=253 Identities=28% Similarity=0.432 Sum_probs=204.4
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
++|++.+.||+|++|.||+|+... ++.|++|++..... ...+.+.+|++++++++|||++++++++......++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 368888999999999999999874 88999998865433 3456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHH-SCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 81 MDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999764 468999999999999999999999 8 999999999999999999999999999986654
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
.... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ............ ..+
T Consensus 153 ~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~~~~~------~~~ 221 (264)
T cd06623 153 TLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP---SFFELMQAICDG------PPP 221 (264)
T ss_pred CCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc---CHHHHHHHHhcC------CCC
Confidence 3322 12446788999999999888999999999999999999999998654321 111111111111 011
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.... ......+.+++.+|++.+|++||++.+++++
T Consensus 222 ~~~~----~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 SLPA----EEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCc----ccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1110 0023467788889999999999999999985
No 317
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=7.6e-32 Score=301.25 Aligned_cols=247 Identities=26% Similarity=0.306 Sum_probs=199.0
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
+|++.+.||+|+||.||+|++. ++..||+|.+..... ...+.+.+|++++++++||||+++++++..+...++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999987 588999998864322 235678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+.+++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++|+|||.+.....
T Consensus 81 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 81 LLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred CCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence 99999999998753 3688999999999999999999999 999999999999999999999999999976543
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
.. ......|+..|+|||++.+..++.++|+||+|+++|+|++|+.||....... .......... .. +
T Consensus 153 ~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~--~~----~ 219 (258)
T cd05578 153 DT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET--AD----V 219 (258)
T ss_pred Cc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc--cc----c
Confidence 22 1234568889999999988889999999999999999999999997543221 1111111110 00 0
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCH--HHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTM--IQVM 1201 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~--~ell 1201 (1237)
..+ ......+.+++.+||+.+|.+||++ .+++
T Consensus 220 ~~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 220 LYP-----ATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cCc-----ccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111 1112466788889999999999999 5554
No 318
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.98 E-value=8.1e-32 Score=307.53 Aligned_cols=268 Identities=22% Similarity=0.290 Sum_probs=196.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcC-CCCcccccceEEeCCe-----
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEE----- 998 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 998 (1237)
++|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|+.+++++. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999986 588999998754322 22356888999999995 6999999999877665
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC-CCceEEeecc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE-NFEARVSDFG 1077 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~-~~~vkl~DfG 1077 (1237)
.++||||+++ +|.+++..........+++..+..++.||++||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 899988765433245789999999999999999999999 9999999999999998 8999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh-
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE- 1155 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 1155 (1237)
+++....... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||...... .............
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~ 232 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL--QQLLHIFKLLGTPT 232 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHhCCCC
Confidence 9986543221 1123356888999998865 45789999999999999999999998643210 0011000000000
Q ss_pred -cccccccC-------cccc---CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1156 -KRINEILD-------PELT---MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1156 -~~~~~~~~-------~~l~---~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
........ +... .....+.....+.+++.+|++++|.+||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000 0000 000001123457788999999999999999999864
No 319
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.98 E-value=8.7e-32 Score=305.26 Aligned_cols=254 Identities=23% Similarity=0.386 Sum_probs=194.3
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHH-HHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMET-IGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
++|++.+.||+|+||.||+|++. +++.||+|++..... .....+..|+.. ++..+||||+++++++..+...++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999987 589999998864322 233455666665 666789999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|++ |+|.++++..... ...+++..++.++.|++.|++|||++. +++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 997 7898888764322 357899999999999999999999853 899999999999999999999999999976532
Q ss_pred CCcceeeeccccCCCcCCccccCc----cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQS----FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
.. ......++..|+|||++.+ ..++.++|+||+|+++|||++|+.||.... .......... ..
T Consensus 157 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~~~~~~~-~~----- 223 (283)
T cd06617 157 SV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK----TPFQQLKQVV-EE----- 223 (283)
T ss_pred cc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc----cCHHHHHHHH-hc-----
Confidence 11 1123467889999998865 456889999999999999999999986321 1111111110 00
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+..+. ......+.+++.+|+..+|++||++.+++++
T Consensus 224 -~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 224 -PSPQLPA----EKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred -CCCCCCc----cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111111 1112357788889999999999999999875
No 320
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.98 E-value=1.3e-31 Score=304.40 Aligned_cols=253 Identities=28% Similarity=0.427 Sum_probs=202.8
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
..+.|+..+.||+|+||.||+|.+. ++..|++|++..... ..+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4556888889999999999999987 688899998865333 45678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+++++|.+++.... ..+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 96 ~~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 96 YMDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred ccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 999999999998742 3789999999999999999999998 999999999999999999999999999875543
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
... ......++..|+|||++.+..++.++||||||+++|+|++|+.||..... ..... .... .....
T Consensus 169 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~-----~~~~~-~~~~-~~~~~---- 235 (286)
T cd06614 169 EKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP-----LRALF-LITT-KGIPP---- 235 (286)
T ss_pred chh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-----HHHHH-HHHh-cCCCC----
Confidence 221 12334578899999999888899999999999999999999999864221 11111 1000 00000
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. ........+.+++.+|++.+|.+|||+.+++++
T Consensus 236 -~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 236 -LK---NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -Cc---chhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00 011122457788899999999999999999864
No 321
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=1.2e-32 Score=330.80 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=187.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeC---------
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG--------- 996 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 996 (1237)
.+|+..++||+||||.||+++.+ ||..|||||+.... ......+.+|++.+.+++|||||+++..+.+.
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 45777789999999999999988 89999999997543 23345688999999999999999998643110
Q ss_pred --------------------------------------------------------------------------------
Q 000889 997 -------------------------------------------------------------------------------- 996 (1237)
Q Consensus 997 -------------------------------------------------------------------------------- 996 (1237)
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence
Q ss_pred ------------------------------CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHH
Q 000889 997 ------------------------------EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLH 1046 (1237)
Q Consensus 997 ------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH 1046 (1237)
...||=||||+...+++++++.... -.....++++.+|++||+|+|
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHHHHHHHHHH
Confidence 0136778999988888888764321 146778999999999999999
Q ss_pred hcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec----c------------CCcceeeeccccCCCcCCccccCcc-
Q 000889 1047 HSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN----A------------LDTHLSVSTLAGTPGYVPPEYYQSF- 1109 (1237)
Q Consensus 1047 ~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~----~------------~~~~~~~~~~~gt~~y~aPE~~~~~- 1109 (1237)
++ |||||||||.||++|++..|||+|||+|+... . .......+..+||.-|+|||++.+.
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99 99999999999999999999999999998721 0 1111234568899999999999764
Q ss_pred --ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCC-CCCHHHHHHHHHHHHhc
Q 000889 1110 --RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQ-TSDETELYQYLRISFEC 1186 (1237)
Q Consensus 1110 --~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~l~~li~~c 1186 (1237)
.|+.|+|+||+|||++||+. ||.... . +...+..+-++.++.+ ....+....=.++|++|
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM-----E---------Ra~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~L 854 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSM-----E---------RASILTNLRKGSIPEPADFFDPEHPEEASLIRWL 854 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchH-----H---------HHHHHHhcccCCCCCCcccccccchHHHHHHHHH
Confidence 49999999999999999995 454221 0 1111111112222221 01122223335788899
Q ss_pred cccCCCCCCCHHHHHHH
Q 000889 1187 LDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1187 l~~dP~~RPt~~ell~~ 1203 (1237)
++.||.+||||.|+++.
T Consensus 855 l~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 855 LSHDPSKRPTATELLNS 871 (1351)
T ss_pred hcCCCccCCCHHHHhhc
Confidence 99999999999999863
No 322
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=2.9e-31 Score=302.18 Aligned_cols=259 Identities=20% Similarity=0.229 Sum_probs=182.5
Q ss_pred CCCCCCceecccCCeEEEEEEECCC----CEEEEEEeccccCcC--H---------HHHHHHHHHHHhcCCCCcccccce
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDG----SVVAIKKLIHVTGQG--D---------REFMAEMETIGKIKHRNLVPLLGY 992 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~----~~vavK~~~~~~~~~--~---------~~~~~E~~~l~~l~h~niv~l~~~ 992 (1237)
++|++.++||+|+||+||+|++.++ ..+|+|+........ . .....++..++.++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999998654 345555432211111 0 112233445666789999999997
Q ss_pred EEeCC----eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC
Q 000889 993 CKIGE----ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN 1068 (1237)
Q Consensus 993 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~ 1068 (1237)
+.... ..++++|++. .++.+.+... ...++..+..++.|+++|++|||+. +|+||||||+||+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN 162 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 65543 3467888764 4666666542 2356778889999999999999999 99999999999999999
Q ss_pred CceEEeecccceeeccCCcc-----eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCc
Q 000889 1069 FEARVSDFGMARLVNALDTH-----LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDN 1143 (1237)
Q Consensus 1069 ~~vkl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~ 1143 (1237)
+.+||+|||+|+.+...... .......||+.|+|||+..+..++.++||||+||++|||++|+.||.......
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-- 240 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-- 240 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch--
Confidence 99999999999876432211 11123469999999999999999999999999999999999999997542211
Q ss_pred hHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1144 NLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1144 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
....... .+.+..+......... ....+.+++..|+..+|++||++.++++.++
T Consensus 241 ~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 241 NLIHAAK----CDFIKRLHEGKIKIKN----ANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHhH----HHHHHHhhhhhhccCC----CCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1111100 0001111111111111 1245667888999999999999999998763
No 323
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=2.1e-31 Score=296.20 Aligned_cols=250 Identities=30% Similarity=0.443 Sum_probs=203.0
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
.|+..+.||+|++|.||+|... +++.+++|++........+.+.+|++++++++||+++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3778889999999999999987 688899998876444456778999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.+++.... ..+++..+..++.++++|++|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 81 GGSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred CCcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 999999987642 4689999999999999999999998 999999999999999999999999999986654332
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ......... .... ...
T Consensus 154 ---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~-~~~~-----~~~ 218 (253)
T cd05122 154 ---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP------MKALFKIAT-NGPP-----GLR 218 (253)
T ss_pred ---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch------HHHHHHHHh-cCCC-----CcC
Confidence 2345688899999999888899999999999999999999999864321 011111110 1011 111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. .......+.+++.+|++.+|++|||+.+++++
T Consensus 219 ~---~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 219 N---PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred c---ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 11113457788889999999999999999864
No 324
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=1.1e-31 Score=305.37 Aligned_cols=257 Identities=23% Similarity=0.337 Sum_probs=193.2
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|+..+.||+|+||.||++++. +++.||+|++..... .....+.+|+.++.++. ||||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3555678999999999999886 578999998864322 23456888999999996 99999999999988999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+. +++.++...........+++..+..++.++++|++|||+.. +++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 86 56666543322112357899999999999999999999742 8999999999999999999999999999755432
Q ss_pred CcceeeeccccCCCcCCccccCcc---ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSF---RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.. .....|+..|+|||++.+. .++.++||||+||++|||++|+.||.... ............ .
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~------~ 227 (288)
T cd06616 162 IA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKG------D 227 (288)
T ss_pred Cc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCC------C
Confidence 21 1234678899999999776 68899999999999999999999986422 111111110000 0
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+.+... ........+.+++.+|++.+|++|||+.+++++
T Consensus 228 ~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 PPILSNS-EEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCcCCCc-CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111 101123467788889999999999999999986
No 325
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=8.9e-32 Score=312.84 Aligned_cols=271 Identities=25% Similarity=0.357 Sum_probs=198.3
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeC-----CeE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG-----EER 999 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 999 (1237)
.++|++.++||+|+||.||+|++. +++.||+|++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999876 58899999886422 22345678899999999999999999987654 357
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||++ +++.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~-~~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 84 YIVQELME-TDLYKLIKT------QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred EEEehhcc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 99999997 588777753 3689999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcce-eeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh--h
Q 000889 1080 RLVNALDTHL-SVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR--E 1155 (1237)
Q Consensus 1080 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~ 1155 (1237)
+......... ......|+..|+|||++.+ ..++.++||||+||++|+|++|+.||....... ....+...... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~--~~~~~~~~~~~~~~ 231 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH--QLNLILGVLGTPSQ 231 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCCCH
Confidence 8654322211 1123568899999998754 468899999999999999999999996432100 00000000000 0
Q ss_pred cccccccCc-------cccCCCC------CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhccc
Q 000889 1156 KRINEILDP-------ELTMQTS------DETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQV 1209 (1237)
Q Consensus 1156 ~~~~~~~~~-------~l~~~~~------~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~ 1209 (1237)
+....+.+. ..+.... .+.....+.+++.+|++.+|++|||+.+++++ ++....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 000000000 0000000 01113457789999999999999999999998 555543
No 326
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.1e-33 Score=329.32 Aligned_cols=258 Identities=24% Similarity=0.273 Sum_probs=204.4
Q ss_pred HHHHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecc---ccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCe
Q 000889 923 LLEATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIH---VTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEE 998 (1237)
Q Consensus 923 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 998 (1237)
+.-..++|.+.++||+|+||.|..++.+ +++.||.|++.+ .......-|..|-.+|..-+.+.|+.++.+|++..+
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~ 149 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY 149 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence 3334568999999999999999999987 577899998876 233445678999999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1078 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGl 1078 (1237)
.|+|||||+||+|-.++.+. .++++..++.++..|+.||.-+|+. |+|||||||+|||+|..|++|++|||.
T Consensus 150 LYlVMdY~pGGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred eEEEEecccCchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchh
Confidence 99999999999999999865 2689999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccCCCcCCccccC----c-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh
Q 000889 1079 ARLVNALDTHLSVSTLAGTPGYVPPEYYQ----S-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH 1153 (1237)
Q Consensus 1079 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1153 (1237)
+-.+... ........+|||.|.+||++. + +.|+...|+||+||++|||+.|..||..... .-.|-....
T Consensus 222 Clkm~~d-G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl-----veTY~KIm~ 295 (1317)
T KOG0612|consen 222 CLKMDAD-GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL-----VETYGKIMN 295 (1317)
T ss_pred HHhcCCC-CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH-----HHHHHHHhc
Confidence 9877653 344557789999999999985 2 5688999999999999999999999974321 112222222
Q ss_pred hhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCC---HHHHHHHH
Q 000889 1154 REKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPT---MIQVMAMF 1204 (1237)
Q Consensus 1154 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~ell~~L 1204 (1237)
.... +..+ ...+-.....++|.+.+. +|+.|.. +.++..|-
T Consensus 296 hk~~--------l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 296 HKES--------LSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred hhhh--------cCCC-cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 2211 1111 111122234455555444 7788888 88888874
No 327
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=2.5e-31 Score=305.16 Aligned_cols=248 Identities=29% Similarity=0.410 Sum_probs=195.4
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
..|+..+.||+|+||+||+|+.. +++.||+|++...... ..+++.+|+++++.++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 35788889999999999999876 5889999988543222 2346889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||++ |++.+++.... ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++....
T Consensus 95 e~~~-g~l~~~~~~~~----~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 95 EYCL-GSASDILEVHK----KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred HhhC-CCHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 9997 67777765432 3689999999999999999999999 99999999999999999999999999997654
Q ss_pred cCCcceeeeccccCCCcCCccccC---ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQ---SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
.. ....+++.|+|||++. ...++.++||||||+++|||++|+.||..... ... ........
T Consensus 167 ~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-----~~~-~~~~~~~~---- 230 (307)
T cd06607 167 PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSA-LYHIAQND---- 230 (307)
T ss_pred CC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-----HHH-HHHHhcCC----
Confidence 32 2346788999999874 35688899999999999999999999864321 110 00000000
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
.+.. ........+.+++.+||+.+|++||++.+++++..
T Consensus 231 --~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 269 (307)
T cd06607 231 --SPTL----SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF 269 (307)
T ss_pred --CCCC----CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 0111 01123346788899999999999999999998643
No 328
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-32 Score=281.83 Aligned_cols=262 Identities=22% Similarity=0.323 Sum_probs=197.4
Q ss_pred ceecccCCeEEEEEE-ECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 934 SMIGSGGFGEVYKAQ-LRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
++||+|+||.|--++ ..+|..+|||++.+........+.+|++++.+++ |+||++++++|++++..|+|||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 579999999998875 4579999999998877777888999999999995 99999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCc---eEEeecccceeecc----
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFE---ARVSDFGMARLVNA---- 1084 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~---vkl~DfGla~~~~~---- 1084 (1237)
..+++++ ..+++.++.++..+|+.||.|||.+ ||.|||+||+|||.....+ ||||||.+..-...
T Consensus 164 LshI~~~-----~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~ 235 (463)
T KOG0607|consen 164 LSHIQKR-----KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC 235 (463)
T ss_pred HHHHHHh-----hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence 9999886 4689999999999999999999999 9999999999999975443 89999988743211
Q ss_pred -CCcceeeeccccCCCcCCccccC-----ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1085 -LDTHLSVSTLAGTPGYVPPEYYQ-----SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1085 -~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
........+.+|+..|||||+.. ...|+.+.|.||+|||+|-|++|++||.+.-..+-.--....-..-+..-+
T Consensus 236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LF 315 (463)
T KOG0607|consen 236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 315 (463)
T ss_pred CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHH
Confidence 11112234578899999999873 346889999999999999999999999875432210000000000011112
Q ss_pred ccccCccccCCCCC-HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSD-ETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..|.+..+..+..+ .....+-.+++...+..||.+|-++.+++++
T Consensus 316 esIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 316 ESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred HHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 22222222222111 1122344567777888999999999999884
No 329
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=2.2e-31 Score=303.64 Aligned_cols=264 Identities=25% Similarity=0.284 Sum_probs=196.4
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 1002 (1237)
++|++.+.||+|+||.||+|+++ +++.+|+|++..... .....+.+|+.++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999987 578899998864322 2233567899999999999999999998877 889999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||++ ++|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~ 156 (293)
T cd07843 85 MEYVE-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREY 156 (293)
T ss_pred ehhcC-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence 99997 59999887542 3689999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh--------
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH-------- 1153 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------- 1153 (1237)
..... ......+++.|+|||.+.+. .++.++|+||+|+++|||++|+.||....... ..........
T Consensus 157 ~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 157 GSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID--QLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred cCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCchHHHH
Confidence 54321 12334578899999998764 46889999999999999999999997432110 0100000000
Q ss_pred ------h-h-cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1154 ------R-E-KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 ------~-~-~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. . ..........+............+.+++.+|++.+|++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 0 000000000000000000013456788889999999999999999864
No 330
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=5.7e-31 Score=297.48 Aligned_cols=246 Identities=26% Similarity=0.387 Sum_probs=197.5
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
|+..+.||+|+||.||+|... ++..||+|...... ....+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 677889999999999999875 57889999875322 2234568889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.+++.. ..+++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.++++|||++........
T Consensus 86 ~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 86 GGSALDLLEP------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 9999999863 3578999999999999999999999 999999999999999999999999999976543221
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELT 1167 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1167 (1237)
......++..|+|||.+.+..++.++||||+||++|+|++|..||..... ........ ... .+.+
T Consensus 157 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~-~~~-----~~~~- 221 (277)
T cd06641 157 --KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP------MKVLFLIP-KNN-----PPTL- 221 (277)
T ss_pred --hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch------HHHHHHHh-cCC-----CCCC-
Confidence 12335678899999999888889999999999999999999999864221 01111110 000 0111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1168 MQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1168 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.......+.+++.+|++.+|.+||++.+++++
T Consensus 222 ----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 ----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ----CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11122356678889999999999999999996
No 331
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=7.4e-31 Score=293.12 Aligned_cols=252 Identities=26% Similarity=0.412 Sum_probs=203.1
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EERLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 1003 (1237)
+|+..+.||+|++|.||+|... ++..|++|++..... ...+.+.+|+.++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777889999999999999987 688999998864432 3456788999999999999999999999888 8899999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+++++|.+++... ..+++..+..++.++++|++|||+. +++|+||+|+||+++.++.+||+|||.+....
T Consensus 81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 81 EYVSGGSLSSLLKKF-----GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred EecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 999999999998764 2789999999999999999999998 99999999999999999999999999998776
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
............++..|+|||.+.+..++.++||||+|+++|+|++|..||.... ................
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~---- 223 (260)
T cd06606 153 DIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKIGSSGEPP---- 223 (260)
T ss_pred cccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhccccCCCc----
Confidence 5432111234568889999999988889999999999999999999999997543 1111111111000000
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. + ......+.+++.+|+..+|++||++.+++++
T Consensus 224 -~~--~---~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 224 -EI--P---EHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred -CC--C---cccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 01 1 1113467788889999999999999999864
No 332
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=2.8e-31 Score=301.28 Aligned_cols=264 Identities=22% Similarity=0.343 Sum_probs=197.5
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
+|+..+.||+|++|.||+|++. ++..||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999986 588899998864332 23456778999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
+ ++|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++......
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 81 D-KDLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred C-ccHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 8 589888865432 24689999999999999999999999 99999999999999999999999999997553321
Q ss_pred cceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--------cc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--------KR 1157 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~ 1157 (1237)
. ......++..|+|||++.+. .++.++||||+|+++|||++|+.||...... ............. ..
T Consensus 155 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 155 N--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE--DQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred c--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCChhhHHHHhc
Confidence 1 12334578899999988654 5688999999999999999999999754321 1111110000000 00
Q ss_pred cccccCccccCCCC------CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1158 INEILDPELTMQTS------DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1158 ~~~~~~~~l~~~~~------~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... .....+.... .+.....+.+++.+|++.+|++||++.+++++
T Consensus 231 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 231 LPE-YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred Cch-hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 0000000000 01122456788899999999999999999864
No 333
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.7e-31 Score=306.81 Aligned_cols=265 Identities=28% Similarity=0.291 Sum_probs=195.1
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEeC--CeEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKIG--EERLL 1001 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 1001 (1237)
.++|++.+.||+|+||.||+|++. +++.||+|++...... ....+.+|++++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 357889999999999999999986 5889999988643221 223467899999999999999999998654 56899
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
||||+. ++|.+++.... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 86 v~e~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred EEecCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeee
Confidence 999997 58888887532 4689999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh-ccc-
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE-KRI- 1158 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~- 1158 (1237)
....... .....+++.|+|||++.+ ..++.++||||+|+++|||++|+.||...... ..+.......... ...
T Consensus 158 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 158 YGLPAKP--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI--EQLDLIIQLLGTPNESIW 233 (309)
T ss_pred cCCccCC--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCChhhc
Confidence 6543221 223345788999999865 45789999999999999999999999743211 1111111000000 000
Q ss_pred ccc------cCccccCC-C-CC----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEI------LDPELTMQ-T-SD----ETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~------~~~~l~~~-~-~~----~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... ........ . .. ......+.+++.+|++.||++|||+.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 00000000 0 00 0012456688899999999999999999976
No 334
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=2.3e-31 Score=302.57 Aligned_cols=244 Identities=24% Similarity=0.381 Sum_probs=194.5
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCHH
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLE 1012 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 1012 (1237)
.+||+|+||.||+|... +++.||+|++..........+.+|+.++++++|+||+++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 57999999999999885 68899999886444344556889999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeee
Q 000889 1013 SVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVS 1092 (1237)
Q Consensus 1013 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~ 1092 (1237)
+++.. ..+++.....++.|++.|++|||+. +++||||+|+||++++++.++|+|||++........ ...
T Consensus 106 ~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~ 174 (292)
T cd06657 106 DIVTH------TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRK 174 (292)
T ss_pred HHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc--ccc
Confidence 98753 3578899999999999999999999 999999999999999999999999999875543221 123
Q ss_pred ccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCC
Q 000889 1093 TLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSD 1172 (1237)
Q Consensus 1093 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1172 (1237)
...|++.|+|||++.+..++.++|+||+|+++|||++|..||..... ........ . ...+......
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---~~~~~~~~---~------~~~~~~~~~~-- 240 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAMKMIR---D------NLPPKLKNLH-- 240 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHH---h------hCCcccCCcc--
Confidence 45688999999999888889999999999999999999999864321 11111110 0 0111111111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1173 ETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1173 ~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.....+.+++.+|++.+|.+||++.+++++
T Consensus 241 -~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 241 -KVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred -cCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 112345678889999999999999999985
No 335
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=3.2e-31 Score=296.03 Aligned_cols=250 Identities=25% Similarity=0.386 Sum_probs=198.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.+.||+|+||.||+|..+ ++..+|+|.+.... ....+.+.+|++++++++|+||+++++++......++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999987 47889999875432 23345678999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC-ceEEeecccceeecc
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF-EARVSDFGMARLVNA 1084 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~-~vkl~DfGla~~~~~ 1084 (1237)
+++++|.+++.... ...+++..+..++.|+++|++|||+. +++|+||||+||++++++ .+|++|||.+.....
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 81 CDGGDLMKRINRQR---GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 99999999987532 23579999999999999999999999 999999999999999875 469999999976643
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
... ......|++.|+|||+..+..++.++||||+|+++|||++|+.||.... ...+....... . ..+
T Consensus 155 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~-~----~~~ 221 (257)
T cd08225 155 SME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLKICQG-Y----FAP 221 (257)
T ss_pred Ccc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHhcc-c----CCC
Confidence 221 1223468889999999988889999999999999999999999986432 11111111111 1 110
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. .+.....+.+++.+|+..+|++|||+.+++++
T Consensus 222 ~------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 222 I------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred C------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0 01112357788889999999999999999875
No 336
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=5.2e-31 Score=298.70 Aligned_cols=259 Identities=22% Similarity=0.251 Sum_probs=192.2
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhcC-CCCcccccceEEeC--CeEEEEEE
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKIK-HRNLVPLLGYCKIG--EERLLVYE 1004 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 1004 (1237)
|++.+.||+|+||.||+|+.. ++..||+|++.... ........+|+.+++++. |||++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999876 58899999886532 222334567899999885 99999999999887 88999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|++ |++.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++. +.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 81 LMD-MNLYELIKGRK----RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred cCC-ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 997 58888876532 4689999999999999999999999 9999999999999999 9999999999986543
Q ss_pred CCcceeeeccccCCCcCCccccC-ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--c-----
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQ-SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--K----- 1156 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~----- 1156 (1237)
... .....++..|+|||++. +..++.++||||+||++|||++|..||...... ....+....... .
T Consensus 152 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 225 (282)
T cd07831 152 KPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL---DQIAKIHDVLGTPDAEVLKK 225 (282)
T ss_pred CCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH---HHHHHHHHHcCCCCHHHHHh
Confidence 222 12345788999999764 456788999999999999999999999653211 111111110000 0
Q ss_pred -ccccccCccccCCCC------CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1157 -RINEILDPELTMQTS------DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1157 -~~~~~~~~~l~~~~~------~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
......+...+.... .......+.+++.+|++++|++||++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 226 FRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred hcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000000000000000 01123577889999999999999999999874
No 337
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=2.8e-31 Score=305.39 Aligned_cols=266 Identities=23% Similarity=0.325 Sum_probs=193.1
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCC------
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE------ 997 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 997 (1237)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 346889999999999999999986 58899999886432 122345678999999999999999999886543
Q ss_pred --eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEee
Q 000889 998 --ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSD 1075 (1237)
Q Consensus 998 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~D 1075 (1237)
..++||||+. +++.+++... ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNK----NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECc
Confidence 4599999997 5888877643 23689999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcc--eeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHH
Q 000889 1076 FGMARLVNALDTH--LSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQL 1152 (1237)
Q Consensus 1076 fGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1152 (1237)
||++......... .......++..|+|||.+.+. .++.++||||+|+++|||++|+.||...... .........
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~---~~~~~~~~~ 239 (310)
T cd07865 163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ---HQLTLISQL 239 (310)
T ss_pred CCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHH
Confidence 9999765432221 112234578889999988664 4688999999999999999999998653211 111111110
Q ss_pred hhh---cccccc-----cC-ccccCC--------CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1153 HRE---KRINEI-----LD-PELTMQ--------TSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1153 ~~~---~~~~~~-----~~-~~l~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... ...... .+ ...+.. .........+.+++.+|++.+|.+|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 000000 00 000000 0000012345689999999999999999999864
No 338
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=2.1e-31 Score=302.00 Aligned_cols=250 Identities=25% Similarity=0.375 Sum_probs=204.7
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcC--HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQG--DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.+.|.+.+.||+|.|+.|.+|++. ++..||+|.+.+..... .+.+.+|+++|+.++|||||+++.+.......|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 457889999999999999999876 58899999886544332 345889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
||+.+|.+.+|+.... ...+..+..++.|++.|++|+|++ .|||||||++||+++.+..+||+|||++..+.
T Consensus 135 eya~~ge~~~yl~~~g-----r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHG-----RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EeccCchhHHHHHhcc-----cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence 9999999999998753 445578889999999999999999 99999999999999999999999999999876
Q ss_pred cCCcceeeeccccCCCcCCccccCcccc-CcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRC-TTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.. ....+.+|++.|.|||++.+..| +..+|+||+|+++|-|+.|..||++....+- +. ..+
T Consensus 207 ~~---~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-----------r~----rvl 268 (596)
T KOG0586|consen 207 YG---LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-----------RP----RVL 268 (596)
T ss_pred cc---ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-----------cc----hhe
Confidence 32 23467899999999999998876 4679999999999999999999986432211 11 111
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
...+..+.+-..+ .-+++.+++-.+|.+|+++++++++-.
T Consensus 269 ~gk~rIp~~ms~d---ce~lLrk~lvl~Pskr~~~dqim~~~W 308 (596)
T KOG0586|consen 269 RGKYRIPFYMSCD---CEDLLRKFLVLNPSKRGPCDQIMKDRW 308 (596)
T ss_pred eeeecccceeech---hHHHHHHhhccCccccCCHHHhhhhcc
Confidence 2222222222222 335666899999999999999998853
No 339
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=325.97 Aligned_cols=258 Identities=26% Similarity=0.413 Sum_probs=203.4
Q ss_pred CCCCceecccCCeEEEEEEEC----C----CCEEEEEEeccccC-cCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeE
Q 000889 930 FSADSMIGSGGFGEVYKAQLR----D----GSVVAIKKLIHVTG-QGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~----~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 999 (1237)
..+.+.+|+|.||.||+|... . ...||||.+..... .+.+.+..|+++|+.+ +||||+.++|+|.+++..
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~ 377 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPL 377 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCce
Confidence 345558999999999999754 1 44699998874433 3456789999999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhh---------cCCC--CccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC
Q 000889 1000 LLVYEYMKWGSLESVLHDRA---------KGGG--TKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN 1068 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~---------~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~ 1068 (1237)
++|+||+..|+|.+|++..+ .... ..++......++.|||.|++||++. ++||||+.++|||++++
T Consensus 378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKN 454 (609)
T ss_pred EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCC
Confidence 99999999999999998876 1111 2388999999999999999999999 99999999999999999
Q ss_pred CceEEeecccceeeccCCcceeeeccc--cCCCcCCccccCccccCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchH
Q 000889 1069 FEARVSDFGMARLVNALDTHLSVSTLA--GTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNL 1145 (1237)
Q Consensus 1069 ~~vkl~DfGla~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~ 1145 (1237)
..+||+|||+|+.....+.... .... -+..|||||.+....|+.++|||||||++||+++ |..||.+-. ....+
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~-~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~--~~~~l 531 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRT-KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP--PTEEL 531 (609)
T ss_pred CEEEEccccceeccCCCCceEe-cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC--cHHHH
Confidence 9999999999997665444332 2222 3557999999999999999999999999999999 888986411 11122
Q ss_pred HHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhc
Q 000889 1146 VGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKEL 1207 (1237)
Q Consensus 1146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l 1207 (1237)
. .......+ +..+..+. .++.++++.||+.+|++||++.++++.++..
T Consensus 532 ~---~~l~~G~r--------~~~P~~c~---~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 532 L---EFLKEGNR--------MEQPEHCS---DEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred H---HHHhcCCC--------CCCCCCCC---HHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 1 11222211 12222333 3455788899999999999999999999884
No 340
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=8.7e-31 Score=297.05 Aligned_cols=261 Identities=23% Similarity=0.313 Sum_probs=195.5
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
|++.+.||.|++|.||+|++. +|..||+|++.... ......+.+|++++++++|||++++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 667889999999999999876 68899999886432 222356888999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
+ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||+++......
T Consensus 81 ~-~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 81 D-LDLKKYMDSSPL---TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred C-cCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 5 689998875432 3689999999999999999999999 99999999999999999999999999997554322
Q ss_pred cceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhc---------
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREK--------- 1156 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 1156 (1237)
. ......++..|+|||++.+. .++.++||||+|+++|||++|+.||..... ...............
T Consensus 154 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 154 R--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE--IDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred c--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChHHhhhhhh
Confidence 1 11234568899999988654 568899999999999999999999864321 011111111000000
Q ss_pred --c----cccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1157 --R----INEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1157 --~----~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. .......... ...+.....+.+++.+|++.+|++|||+.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 230 LPDYKPTFPKWARQDLS--KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred chhhhhhcccccccchh--hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 0000000000 0001112456789999999999999999999864
No 341
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=5.5e-31 Score=297.62 Aligned_cols=242 Identities=25% Similarity=0.332 Sum_probs=185.3
Q ss_pred eecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHh---cCCCCcccccceEEeCCeEEEEEEecc
Q 000889 935 MIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGK---IKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
+||+|+||.||+|... +++.+|+|.+..... .....+.+|..+++. .+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999986 578999998864321 112234455444433 479999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++........
T Consensus 81 ~~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 152 (279)
T cd05633 81 GGDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 152 (279)
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc
Confidence 99999988753 4689999999999999999999999 999999999999999999999999999975543221
Q ss_pred ceeeeccccCCCcCCccccC-ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQ-SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
....|+..|+|||++. +..++.++||||+||++|||++|+.||.......... ...... ..+..+
T Consensus 153 ----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~~------~~~~~~ 218 (279)
T cd05633 153 ----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTL------TVNVEL 218 (279)
T ss_pred ----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH----HHHHhh------cCCcCC
Confidence 2346899999999986 4568899999999999999999999997543211111 111000 011111
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
+ .....++.+++.+|++.+|.+|| |+++++++
T Consensus 219 ~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 219 P-----DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred c-----cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1 11223567888899999999999 59988876
No 342
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=2.1e-31 Score=309.79 Aligned_cols=268 Identities=23% Similarity=0.328 Sum_probs=200.1
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc--cCcCHHHHHHHHHHHHhcCCCCcccccceEEeC-----Ce
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV--TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIG-----EE 998 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 998 (1237)
.++|++.+.||+|+||+||+|+.. ++..||+|++... .......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457899999999999999999876 5889999988642 223345677899999999999999999988654 34
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1078 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGl 1078 (1237)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcc
Confidence 799999996 7888887643 4689999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh----
Q 000889 1079 ARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH---- 1153 (1237)
Q Consensus 1079 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---- 1153 (1237)
++....... ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||....... .........
T Consensus 155 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~ 229 (337)
T cd07858 155 ARTTSEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH---QLKLITELLGSPS 229 (337)
T ss_pred ccccCCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCC
Confidence 986643321 1234567889999998864 468899999999999999999999996542110 000000000
Q ss_pred -------hhcc-------cccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhcccc
Q 000889 1154 -------REKR-------INEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQVD 1210 (1237)
Q Consensus 1154 -------~~~~-------~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~~ 1210 (1237)
.... .....++... ...+.....+.+++.+|++.+|++|||+.+++++ +..+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 230 EEDLGFIRNEKARRYIRSLPYTPRQSFA--RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred hHHhhhcCchhhhHHHHhcCcccccCHH--HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 0000 0000000000 0001123456789999999999999999999998 6665443
No 343
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=5.8e-31 Score=306.24 Aligned_cols=274 Identities=24% Similarity=0.357 Sum_probs=199.9
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc--cCcCHHHHHHHHHHHHhc-CCCCcccccceEEeC--CeE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV--TGQGDREFMAEMETIGKI-KHRNLVPLLGYCKIG--EER 999 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 999 (1237)
..++|++.+.||+|+||.||+|.+. +++.+|+|++... .......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888899999999999999986 5788999988542 122334577899999999 999999999988653 368
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 85 ~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~ 154 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLA 154 (337)
T ss_pred EEEecccc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccch
Confidence 99999997 5998887642 678888999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc---eeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHH---
Q 000889 1080 RLVNALDTH---LSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQL--- 1152 (1237)
Q Consensus 1080 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 1152 (1237)
+........ .......|+..|+|||++.+ ..++.++||||||+++|||++|+.||......+ .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~--~~~~~~~~~~~~ 232 (337)
T cd07852 155 RSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN--QLEKIIEVIGPP 232 (337)
T ss_pred hccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCC
Confidence 866443221 12234568889999998764 457889999999999999999999996432111 000000000
Q ss_pred -----------hhhcccccccCccccC-CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhccccc
Q 000889 1153 -----------HREKRINEILDPELTM-QTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQVDT 1211 (1237)
Q Consensus 1153 -----------~~~~~~~~~~~~~l~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~~~ 1211 (1237)
........+....... ....+.....+.+++.+|++.+|++|||+.+++++ +..+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~ 305 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPS 305 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCC
Confidence 0000000000000000 00000123467788999999999999999999987 55664443
No 344
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=1.1e-30 Score=293.25 Aligned_cols=249 Identities=23% Similarity=0.275 Sum_probs=189.2
Q ss_pred HHHHHhCCCCCCcee--cccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEEeCC
Q 000889 922 HLLEATNGFSADSMI--GSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGE 997 (1237)
Q Consensus 922 ~~~~~~~~~~~~~~l--G~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 997 (1237)
+.....++|++.+.+ |+|+||.||+++.+ ++..+|+|.+....... .|+.....+ +||||+++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence 334445677777776 99999999999876 57778888775422111 122222222 6999999999999999
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC-ceEEeec
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF-EARVSDF 1076 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~-~vkl~Df 1076 (1237)
..++||||+++++|.+++... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++ .++|+||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKE-----GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 999999999999999999753 3789999999999999999999999 999999999999999988 9999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhc
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREK 1156 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1156 (1237)
|+++..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||...... ......+.... ..
T Consensus 155 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~ 225 (267)
T PHA03390 155 GLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ--QK 225 (267)
T ss_pred ccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh--cc
Confidence 998765422 2346889999999999888999999999999999999999999743221 11112221111 00
Q ss_pred ccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCC-HHHHHHH
Q 000889 1157 RINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPT-MIQVMAM 1203 (1237)
Q Consensus 1157 ~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~ell~~ 1203 (1237)
..... ......+.+++.+|++.+|.+||+ +.+++++
T Consensus 226 --------~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 226 --------KLPFI---KNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred --------cCCcc---cccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 00000 112235677888999999999996 5888753
No 345
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=5.1e-31 Score=294.09 Aligned_cols=250 Identities=24% Similarity=0.398 Sum_probs=202.0
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.++||+|+||.||+++.. +++.+|+|++.... ......+.+|++++++++||||+++++++......++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999876 57889999886432 22344678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++..... ....+++..++.++.|+++|++|||+. +++|+||+|+||+++.++.+|++|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 81 APFGDLSKAISKRKK-KRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred cCCCCHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 999999999876432 235789999999999999999999999 9999999999999999999999999999866543
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
......+++.|+|||.+.+..++.++|+||+|+++|||++|+.||..... .... ... ...... .
T Consensus 157 ----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~---~~~-~~~~~~-----~ 220 (256)
T cd08530 157 ----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM---QDLR---YKV-QRGKYP-----P 220 (256)
T ss_pred ----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHH---HHH-hcCCCC-----C
Confidence 12234678899999999988899999999999999999999999974321 1111 111 011110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. ......++.+++.+|++.+|++||++.+++++
T Consensus 221 ~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 221 I-----PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred C-----chhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1 11233567889999999999999999999875
No 346
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=6e-31 Score=297.28 Aligned_cols=245 Identities=27% Similarity=0.363 Sum_probs=191.4
Q ss_pred ecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 936 IGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 936 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
||+|+||+||+|... +++.||+|.+.... ....+.+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999876 58899999885422 22344567899999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceee
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSV 1091 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~ 1091 (1237)
.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||.+...... ...
T Consensus 81 ~~~l~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~ 151 (277)
T cd05577 81 KYHIYNVGE---PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKI 151 (277)
T ss_pred HHHHHHcCc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC---Ccc
Confidence 999876432 4689999999999999999999999 9999999999999999999999999998765431 112
Q ss_pred eccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCC
Q 000889 1092 STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTS 1171 (1237)
Q Consensus 1092 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1171 (1237)
....++..|+|||++.+..++.++||||+|+++|+|++|+.||........ ... .... ...........
T Consensus 152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~----~~~~-----~~~~~~~~~~~ 220 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE--KEE----LKRR-----TLEMAVEYPDK 220 (277)
T ss_pred ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc--HHH----HHhc-----cccccccCCcc
Confidence 345678899999999888899999999999999999999999975432111 000 0000 00001111111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1172 DETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1172 ~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
....+.+++.+|++.+|.+|| ++.+++++
T Consensus 221 ---~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 221 ---FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred ---CCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 123566888899999999999 77777654
No 347
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=8.3e-31 Score=292.56 Aligned_cols=252 Identities=24% Similarity=0.414 Sum_probs=204.3
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.+.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|++++++++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788899999999999999986 588999998865432 3456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++..... .+..+++..+..++.++++|++|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 81 ADGGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred cCCCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999987532 235789999999999999999999999 9999999999999999999999999999866543
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
. .......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... ............ . +.
T Consensus 157 ~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~~~-~-----~~ 222 (258)
T cd08215 157 V--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN------LLELALKILKGQ-Y-----PP 222 (258)
T ss_pred c--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc------HHHHHHHHhcCC-C-----CC
Confidence 2 12234568889999999988889999999999999999999999986432 111111111111 0 11
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
++ . .....+.+++.+|+..+|++|||+.+++++
T Consensus 223 ~~--~---~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 223 IP--S---QYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CC--C---CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 1 112356788889999999999999999864
No 348
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=1.9e-31 Score=309.84 Aligned_cols=267 Identities=25% Similarity=0.337 Sum_probs=197.8
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEe----CCeE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKI----GEER 999 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 999 (1237)
.++|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367899999999999999999876 58899999886432 2334567789999999999999999998753 3467
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||+. ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 84 ~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred EEEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccc
Confidence 99999996 6888887642 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc--eeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh---
Q 000889 1080 RLVNALDTH--LSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH--- 1153 (1237)
Q Consensus 1080 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--- 1153 (1237)
+........ .......++..|+|||++.+ ..++.++||||+|+++|||++|+.||........ +........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~--~~~~~~~~g~~~ 232 (334)
T cd07855 155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ--LKLILSVLGSPS 232 (334)
T ss_pred eeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH--HHHHHHHhCCCh
Confidence 765432211 11124568889999999865 4588999999999999999999999975432110 000000000
Q ss_pred -------hhccccccc---CccccCCC--CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1154 -------REKRINEIL---DPELTMQT--SDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1154 -------~~~~~~~~~---~~~l~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
....+.+.. ........ ..+.....+.+++.+|++.+|++|||+.+++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 000000000 00000000 0011235678899999999999999999999873
No 349
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=5.1e-32 Score=278.83 Aligned_cols=255 Identities=24% Similarity=0.273 Sum_probs=197.1
Q ss_pred HHhCCCCC-CceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEEe----CC
Q 000889 925 EATNGFSA-DSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCKI----GE 997 (1237)
Q Consensus 925 ~~~~~~~~-~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~ 997 (1237)
..+++|++ .++||-|-.|.|-.+..+ +++.+|+|++.. .....+|++..-+. .|||||.+++++.. ..
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 34666766 358999999999998876 688899998753 33456788876555 59999999998753 34
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC---CCCceEEe
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD---ENFEARVS 1074 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~---~~~~vkl~ 1074 (1237)
...+|||.|+||.|.+.++++. ...+++.++..|..||..|+.|||+. .|.||||||+|+|.+ .+..+|++
T Consensus 133 cLLiVmE~meGGeLfsriq~~g---~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRG---DQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred eeEeeeecccchHHHHHHHHcc---cccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEec
Confidence 6689999999999999998764 36799999999999999999999999 999999999999996 45679999
Q ss_pred ecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh
Q 000889 1075 DFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR 1154 (1237)
Q Consensus 1075 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1154 (1237)
|||+|+.... .....+.+-||.|.|||++...+|+...|+||+||+||-|++|.+||........ ...+..
T Consensus 207 DfGFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai--spgMk~---- 277 (400)
T KOG0604|consen 207 DFGFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--SPGMKR---- 277 (400)
T ss_pred ccccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC--ChhHHh----
Confidence 9999986543 3445678899999999999999999999999999999999999999975322110 001111
Q ss_pred hcccccccCccccCCCC-CHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1155 EKRINEILDPELTMQTS-DETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1155 ~~~~~~~~~~~l~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
.|....+..+.. ...-.+...++|+.++..+|++|.|+.+++++=
T Consensus 278 -----rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 278 -----RIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred -----HhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 111111111111 122234456788889999999999999999873
No 350
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=4.9e-31 Score=308.76 Aligned_cols=259 Identities=24% Similarity=0.319 Sum_probs=196.0
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeC------
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG------ 996 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 996 (1237)
..++|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4568999999999999999999976 68899999875321 22334677899999999999999999987543
Q ss_pred CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 997 EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 997 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
...++||||+. ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 35799999996 588887753 378888999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh---
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH--- 1153 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--- 1153 (1237)
|+++....... .....++..|+|||++.+..++.++||||+||++|+|++|+.||..... ...+.....
T Consensus 163 g~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~ 234 (353)
T cd07850 163 GLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-----IDQWNKIIEQLG 234 (353)
T ss_pred ccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHhcC
Confidence 99986543221 2334678899999999998999999999999999999999999964321 111111000
Q ss_pred -------------------hhc-----ccccccCccc-cCCCC--CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1154 -------------------REK-----RINEILDPEL-TMQTS--DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 -------------------~~~-----~~~~~~~~~l-~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... .+.+...... +.... .......+.+++.+|++.||++|||+.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 235 TPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred CCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0000000000 00000 01123456788999999999999999999987
No 351
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=3.5e-31 Score=302.30 Aligned_cols=252 Identities=23% Similarity=0.409 Sum_probs=192.0
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccC-cCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTG-QGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
++|++.+.||+|+||.||+|+++. +..||||.+..... .....+..|+.++.+.. ||||+++++++......++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 467888999999999999999875 88999998864322 23345667887777775 9999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+. +++.++..... ..+++..+..++.|+++|++|||+.. +|+||||+|+||++++++.+||+|||++.....
T Consensus 95 ~~~-~~l~~l~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 95 LMS-TCLDKLLKRIQ----GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred ccC-cCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 985 57777765532 37899999999999999999999732 899999999999999999999999999976543
Q ss_pred CCcceeeeccccCCCcCCccccCccc----cCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFR----CTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
.... ....++..|+|||++.+.. ++.++||||||+++|||++|+.||..... .. ..........
T Consensus 168 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~-~~~~~~~~~~---- 235 (296)
T cd06618 168 SKAK---TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT----EF-EVLTKILQEE---- 235 (296)
T ss_pred CCcc---cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh----HH-HHHHHHhcCC----
Confidence 2221 2335788999999987553 78899999999999999999999864211 11 1111111010
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+...... ....++.+++.+|++.+|++||++.+++++
T Consensus 236 --~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 236 --PPSLPPNE---GFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred --CCCCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01111100 122357788889999999999999999977
No 352
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=6.4e-31 Score=294.50 Aligned_cols=242 Identities=24% Similarity=0.333 Sum_probs=192.8
Q ss_pred ecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 936 IGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 936 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
||.|+||.||+|+.. +++.+|+|++..... ...+.+.+|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999987 488999998864322 2345688999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceee
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSV 1091 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~ 1091 (1237)
.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~ 149 (262)
T cd05572 81 WTILRDR-----GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KT 149 (262)
T ss_pred HHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cc
Confidence 9999763 3578899999999999999999999 99999999999999999999999999998665432 12
Q ss_pred eccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCC
Q 000889 1092 STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTS 1171 (1237)
Q Consensus 1092 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1171 (1237)
....+++.|+|||++.+..++.++|+||+|+++|+|++|..||...... . ........... .....+..
T Consensus 150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~-~~~~~~~~~~~-------~~~~~~~~ 218 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---P-MEIYNDILKGN-------GKLEFPNY 218 (262)
T ss_pred ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---H-HHHHHHHhccC-------CCCCCCcc
Confidence 3346888999999998888999999999999999999999999754321 1 11111111000 01111111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 000889 1172 DETELYQYLRISFECLDDRPFKRPT-----MIQVMA 1202 (1237)
Q Consensus 1172 ~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~ 1202 (1237)
. ...+.+++.+||+.+|++||+ +.|+++
T Consensus 219 ~---~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 219 I---DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred c---CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 1 346778888999999999999 666665
No 353
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=5.4e-31 Score=298.74 Aligned_cols=262 Identities=27% Similarity=0.335 Sum_probs=198.3
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
|++.+.||+|++|.||+|... +++.+++|++...... ....+.+|++++++++||||+++++++..++..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999886 6888999988643322 3456888999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
+ +++.+++.... ..+++..+..++.|+++|++|||+. +|+|+||||+||+++.++.+||+|||.+.......
T Consensus 81 ~-~~l~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 81 D-TDLYKLIKDRQ----RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred C-CCHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 7 48888887632 4789999999999999999999999 99999999999999999999999999998765433
Q ss_pred cceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--cccccccC
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--KRINEILD 1163 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 1163 (1237)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+ ............ .......+
T Consensus 153 --~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 --RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID--QLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred --ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCCchHhcccchh
Confidence 112334578899999998876 78899999999999999999999986533111 000000000000 00000000
Q ss_pred ------ccc------cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1164 ------PEL------TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1164 ------~~l------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... ......+....++.+++.+||+++|.+||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000 0000011233567899999999999999999999864
No 354
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=6.5e-31 Score=303.94 Aligned_cols=284 Identities=22% Similarity=0.307 Sum_probs=206.7
Q ss_pred HHHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEe-CCeE
Q 000889 924 LEATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKI-GEER 999 (1237)
Q Consensus 924 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 999 (1237)
..++++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 456788999999999999999999876 68899999875322 2234678889999999999999999998865 5678
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||+ +++|.+++.. ..+++.....++.|+++|++|||+. +|+||||+|+||++++++.+||+|||.+
T Consensus 86 ~lv~e~~-~~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 86 YFVTELL-GTDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred EEEeehh-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccc
Confidence 9999998 5689888753 3578888889999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHH-------
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQ------- 1151 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~------- 1151 (1237)
...... .....++..|+|||++.+ ..++.++||||+|+++|||++|+.||....... ....+.+.
T Consensus 156 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~--~~~~~~~~~~~~~~~ 228 (328)
T cd07856 156 RIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN--QFSIITDLLGTPPDD 228 (328)
T ss_pred cccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHH
Confidence 754321 123457889999998765 568899999999999999999999996432110 00000000
Q ss_pred ----HhhhcccccccCccccCCCCC----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhcccccCCCCC-CccC
Q 000889 1152 ----LHREKRINEILDPELTMQTSD----ETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQVDTEGDSL-DSFS 1220 (1237)
Q Consensus 1152 ----~~~~~~~~~~~~~~l~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~~~~~~~~-~~~~ 1220 (1237)
.........+........... +.....+.+++.+|++.+|++|||+.+++.+ ++..+...+.+.. +.|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~~~~~~~~ 308 (328)
T cd07856 229 VINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEPVAEEKFD 308 (328)
T ss_pred HHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccccCchhhcC
Confidence 000000000000000000000 0112467788999999999999999999988 5555444333332 5666
Q ss_pred chhh
Q 000889 1221 LKDT 1224 (1237)
Q Consensus 1221 ~~~~ 1224 (1237)
|.++
T Consensus 309 ~~~~ 312 (328)
T cd07856 309 WSFN 312 (328)
T ss_pred Cchh
Confidence 6554
No 355
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=4.2e-31 Score=301.40 Aligned_cols=265 Identities=22% Similarity=0.276 Sum_probs=193.5
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
++|++.+.||+|++|+||+|++. +++.||+|++..... ...+.+.+|++++++++||||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999986 588999998754322 223568889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC-CCceEEeecccceeec
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE-NFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~-~~~vkl~DfGla~~~~ 1083 (1237)
|++ +++.+++.... ....++..+..++.|++.||+|||+. +++||||+|+||+++. ++.+||+|||++....
T Consensus 82 ~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 82 YLD-LDLKKHMDSSP---DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred ccc-ccHHHHHHhCC---CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 996 58888775432 23467888889999999999999999 9999999999999985 5679999999997553
Q ss_pred cCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--cccc-
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--KRIN- 1159 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~- 1159 (1237)
.... ......+++.|+|||++.+. .++.++||||+|+++|+|++|+.||...... ............. ....
T Consensus 155 ~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 155 IPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI--DELFKIFRILGTPNEETWPG 230 (294)
T ss_pred CCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChhhccc
Confidence 3211 12334578899999998664 5788999999999999999999999643211 1111100000000 0000
Q ss_pred -----ccc--CccccCCC---CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1160 -----EIL--DPELTMQT---SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1160 -----~~~--~~~l~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... -+...... ..+....++.+++.+|++.+|++||++.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00000000 001112346788889999999999999999974
No 356
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=6.3e-31 Score=294.88 Aligned_cols=246 Identities=24% Similarity=0.340 Sum_probs=193.6
Q ss_pred ecccCCeEEEEEEECC-CCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 936 IGSGGFGEVYKAQLRD-GSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 936 lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
||+|+||.||+|++.. ++.+++|.+..... ...+.+.+|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999874 88999998864332 2345688899999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc----
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT---- 1087 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~---- 1087 (1237)
.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 81 ASLLENV-----GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 9999753 3689999999999999999999999 999999999999999999999999999875443211
Q ss_pred --ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1088 --HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1088 --~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
........++..|+|||+..+..++.++||||||+++||+++|+.||..... ......... ... .
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~-~~~------~ 219 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP------EEIFQNILN-GKI------E 219 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhc-CCc------C
Confidence 1122345678899999999888899999999999999999999999974321 111111111 000 0
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
.+.... ....+.+++.+|++.+|.+|||+.++.+.++
T Consensus 220 ~~~~~~---~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 220 WPEDVE---VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CCcccc---CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 100000 1245678888999999999999955555543
No 357
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=2.3e-30 Score=288.44 Aligned_cols=248 Identities=26% Similarity=0.461 Sum_probs=200.7
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|++.+.||+|++|.||+|+.. +++.|++|.+..... ...+.+.+|++++++++|||++++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999876 578899998875433 2345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+++++|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 81 AENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred CCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 9999999998754 4689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCcc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPE 1165 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1165 (1237)
... .....++..|+|||...+..++.++||||+|+++|+|++|+.||.... ......... . .. .+.
T Consensus 153 ~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~-----~~~~~~~~~-~-~~-----~~~ 218 (254)
T cd06627 153 SKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN-----PMAALFRIV-Q-DD-----HPP 218 (254)
T ss_pred ccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHh-c-cC-----CCC
Confidence 322 234568889999999988888999999999999999999999986422 111111110 0 00 011
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1166 LTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1166 l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+ .. ....+.+++.+|+..+|++|||+.+++.+
T Consensus 219 ~~--~~---~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 219 LP--EG---ISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CC--CC---CCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 11 11 12356688889999999999999999853
No 358
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1.3e-30 Score=302.46 Aligned_cols=294 Identities=23% Similarity=0.280 Sum_probs=204.2
Q ss_pred CCCCCceecccCCeEEEEEEECC---CCEEEEEEeccccC--cCHHHHHHHHHHHHhc-CCCCcccccceEEeC----Ce
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD---GSVVAIKKLIHVTG--QGDREFMAEMETIGKI-KHRNLVPLLGYCKIG----EE 998 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 998 (1237)
+|++.+.||+|+||.||+|+... +..||+|++..... ...+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 47788899999999999999863 67899998764221 2245678899999999 599999999875432 45
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1078 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGl 1078 (1237)
.++++||+. ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 688889886 6898888642 4688999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcc--eeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHH-----
Q 000889 1079 ARLVNALDTH--LSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAK----- 1150 (1237)
Q Consensus 1079 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~----- 1150 (1237)
++........ .......|+..|+|||++.+ ..++.++||||+||++|+|++|+.||....... .+.....
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~ 229 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD--QLNQILQVLGTP 229 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH--HHHHHHHHhCCC
Confidence 9865432211 11233568999999998765 468899999999999999999999987533110 0000000
Q ss_pred ------HHhhhc--cccccc--CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhcccccCCCCC--
Q 000889 1151 ------QLHREK--RINEIL--DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQVDTEGDSL-- 1216 (1237)
Q Consensus 1151 ------~~~~~~--~~~~~~--~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~~~~~~~~-- 1216 (1237)
...... ...... .+........+.....+.+++.+|++.+|++|||+.+++++ +.+.....+.+-+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~~~~~ 309 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEPVCQK 309 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccccccccc
Confidence 000000 000000 00000000000112457788899999999999999999876 3333322222222
Q ss_pred --CccCchhhHHHHHHHhh
Q 000889 1217 --DSFSLKDTVIEELRERE 1233 (1237)
Q Consensus 1217 --~~~~~~~~~~~~~~~~~ 1233 (1237)
+....-|+.+|++|++-
T Consensus 310 ~~~~~~~~~~~~~~~~~~~ 328 (332)
T cd07857 310 PFDFSFESEDSMEELRDMI 328 (332)
T ss_pred cccCCccccccHHHHHHHH
Confidence 11234467778887753
No 359
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=7.8e-31 Score=298.02 Aligned_cols=263 Identities=26% Similarity=0.334 Sum_probs=196.5
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeEEEEEE
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EERLLVYE 1004 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 1004 (1237)
|++.+.||+|+||.||+|+.. +++.+|+|++.... ....+.+.+|++++++++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999987 47899999987543 23345688999999999999999999999887 78999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|++ ++|.+++.... ..+++..+..++.|+++|++|||+. +++|+||||+||++++++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 81 YMD-HDLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred ccc-ccHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 997 58888876532 4689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--cccccc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--KRINEI 1161 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 1161 (1237)
... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ............. ......
T Consensus 153 ~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 153 RNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--EQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred CCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCchhhcccc
Confidence 332 11233456788999998765 45789999999999999999999998753311 1111100000000 000000
Q ss_pred --------cCccccCCCC-----CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 --------LDPELTMQTS-----DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 --------~~~~l~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+....... .......+.+++.+|++.+|++||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000000000 00013467889999999999999999999864
No 360
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=4.9e-31 Score=306.20 Aligned_cols=271 Identities=26% Similarity=0.334 Sum_probs=203.4
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCC-----eEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE-----ERL 1000 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 1000 (1237)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888899999999999999986 48899999886533 334567889999999999999999999987765 789
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccce
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1080 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~ 1080 (1237)
+||||++ ++|.+++... ..+++..+..++.++++||+|||+. +|+||||||+||+++.++.++|+|||++.
T Consensus 81 lv~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 81 IVTELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred EEecchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 9999998 5888887643 3789999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCc-ceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh-----
Q 000889 1081 LVNALDT-HLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH----- 1153 (1237)
Q Consensus 1081 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----- 1153 (1237)
....... ........++..|+|||++.+. .++.++||||+|+++|+|++|+.||......+ ..........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~ 229 (330)
T cd07834 152 GVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID--QLNLIVEVLGTPSEE 229 (330)
T ss_pred eecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHhcCCCChh
Confidence 7654321 0112345678899999999887 78999999999999999999999997543210 0000000000
Q ss_pred -----hhcccccccC---ccccCCC--CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhcccc
Q 000889 1154 -----REKRINEILD---PELTMQT--SDETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQVD 1210 (1237)
Q Consensus 1154 -----~~~~~~~~~~---~~l~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~~ 1210 (1237)
........+. ....... ..+.....+.+++.+||+.+|++||++.+++++ ++.+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0000000000 0000000 001123456788899999999999999999997 6666554
No 361
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=8.4e-31 Score=300.21 Aligned_cols=268 Identities=26% Similarity=0.325 Sum_probs=196.4
Q ss_pred HHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCC----
Q 000889 925 EATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE---- 997 (1237)
Q Consensus 925 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 997 (1237)
...++|++.+.||+|+||.||+|+++ +++.||+|++.... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34568999999999999999999987 57899999886432 223356778999999999999999999887654
Q ss_pred ------eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCce
Q 000889 998 ------ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEA 1071 (1237)
Q Consensus 998 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~v 1071 (1237)
..++||||+++ ++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcE
Confidence 78999999985 777776543 24689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHH
Q 000889 1072 RVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAK 1150 (1237)
Q Consensus 1072 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1150 (1237)
||+|||.+......... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||..... ...+.....
T Consensus 156 kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~--~~~~~~~~~ 232 (302)
T cd07864 156 KLADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE--LAQLELISR 232 (302)
T ss_pred EeCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHH
Confidence 99999999866543321 1123346778999998865 3578899999999999999999999974321 111111111
Q ss_pred HHhhh--ccccccc--------CccccCCC----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1151 QLHRE--KRINEIL--------DPELTMQT----SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1151 ~~~~~--~~~~~~~--------~~~l~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..... .....+. ++...... ........+.+++.+|++.+|.+||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 10000 0000000 00000000 000012457788899999999999999999864
No 362
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=2e-30 Score=298.90 Aligned_cols=257 Identities=20% Similarity=0.243 Sum_probs=188.5
Q ss_pred ceecccCCeEEEEEEECCCCEEEEEEeccc--cCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 934 SMIGSGGFGEVYKAQLRDGSVVAIKKLIHV--TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
+.+|.|+++.||++.. +++.||+|++... .....+.+.+|++++++++||||+++++++...+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3344444545555444 5889999998643 233446788999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc---
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH--- 1088 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~--- 1088 (1237)
.+++..... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+.........
T Consensus 87 ~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 87 EDLLKTHFP---EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 999986432 3578889999999999999999999 9999999999999999999999999998755432211
Q ss_pred --eeeeccccCCCcCCccccCc--cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc--
Q 000889 1089 --LSVSTLAGTPGYVPPEYYQS--FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL-- 1162 (1237)
Q Consensus 1089 --~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1162 (1237)
.......++..|+|||++.+ ..++.++||||+||++|||++|+.||...... ... ..... ......+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~---~~~~~--~~~~~~~~~ 233 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QML---LEKVR--GTVPCLLDK 233 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHH---HHHHh--ccCcccccc
Confidence 11233456778999999876 35888999999999999999999999743211 000 01000 0000000
Q ss_pred ------------------CccccC---CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1163 ------------------DPELTM---QTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1163 ------------------~~~l~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
++.... .........++.+++.+||+.+|++|||+.+++++-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 234 STYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred CchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 000000 000111224677899999999999999999999873
No 363
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=1.9e-30 Score=294.31 Aligned_cols=264 Identities=25% Similarity=0.350 Sum_probs=196.1
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC-cCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEEEec
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG-QGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
|++.+.||+|+||+||+|+.. +++.|++|++..... .......+|+..+++++ ||||+++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999986 478899998864322 22334567999999999 999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
+|+|.+++.... +..+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 -~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 81 -EGNLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred -CCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 789999887643 24689999999999999999999999 99999999999999999999999999998654322
Q ss_pred cceeeeccccCCCcCCccccC-ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCch----------HHHHHHHHhhh
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQ-SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNN----------LVGWAKQLHRE 1155 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~----------~~~~~~~~~~~ 1155 (1237)
. .....++..|+|||++. +..++.++|+||||+++|||++|+.||......+... ...|.......
T Consensus 154 ~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 154 P---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred C---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh
Confidence 2 23356788999999875 4457899999999999999999999986543211000 00011100000
Q ss_pred cccccccCccccCC--CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1156 KRINEILDPELTMQ--TSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1156 ~~~~~~~~~~l~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
......+....... ...+.....+.+++.+|++.+|++|||+.|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 11111100000000 0000112467889999999999999999999864
No 364
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.1e-30 Score=299.73 Aligned_cols=249 Identities=29% Similarity=0.396 Sum_probs=193.8
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
|+..+.||+|+||.||+|+.. ++..+|+|++..... ...+++.+|+++++.++|+|++++++++......++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 556678999999999999986 577899998753221 2234678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+. |++.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||++......
T Consensus 97 ~~-~~l~~~~~~~~----~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 97 CL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred cC-CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 97 68887775432 3578999999999999999999999 9999999999999999999999999999765432
Q ss_pred CcceeeeccccCCCcCCccccC---ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQ---SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
....+++.|+|||++. ...++.++|||||||++|||++|+.||..... . ....... ....
T Consensus 169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~-~~~~~~~-~~~~---- 231 (308)
T cd06634 169 ------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----M-SALYHIA-QNES---- 231 (308)
T ss_pred ------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH-----H-HHHHHHh-hcCC----
Confidence 2345788999999974 34678899999999999999999999854211 0 0000000 0000
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
+... .......+.+++.+||+.+|++||++.+++++-....
T Consensus 232 -~~~~----~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 232 -PALQ----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred -CCcC----cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 1110 1112245678888999999999999999998855544
No 365
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=1.9e-30 Score=291.01 Aligned_cols=251 Identities=22% Similarity=0.363 Sum_probs=193.8
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-----CcCHHHHHHHHHHHHhcCCCCcccccceEEeC--CeE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-----GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG--EER 999 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 999 (1237)
.+|++.+.||+|+||.||+|++. ++..||+|.+.... ......+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46889999999999999999876 58899999874211 12234688899999999999999999998764 467
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||+++++|.+++... ..+++..+.+++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 153 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGAS 153 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccc
Confidence 8999999999999998753 3578888999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCc-ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1080 RLVNALDT-HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1080 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+....... ........++..|+|||++.+..++.++|||||||++|||++|+.||.... ....... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~-~~~~~-- 225 (264)
T cd06653 154 KRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE-----AMAAIFK-IATQP-- 225 (264)
T ss_pred cccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC-----HHHHHHH-HHcCC--
Confidence 86532111 111123568889999999998889999999999999999999999986421 1111111 00000
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+.+ .......+.+++.+|+. +|..||++.+++.+
T Consensus 226 ---~~~~~-----p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 226 ---TKPML-----PDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ---CCCCC-----CcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 01111 11122356778889999 57999999988764
No 366
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.3e-30 Score=303.61 Aligned_cols=266 Identities=24% Similarity=0.356 Sum_probs=195.2
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeC------C
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIG------E 997 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 997 (1237)
.++|...+.||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 468999999999999999999975 58899999886422 22234678999999999999999999998654 3
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
..++|+||+. .++.++.. ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 94 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred eEEEEecccc-cCHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCC
Confidence 5699999996 46766542 3578899999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHH----
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQL---- 1152 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~---- 1152 (1237)
+++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.......
T Consensus 163 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~ 235 (342)
T cd07879 163 LARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD--QLTQILKVTGVPG 235 (342)
T ss_pred CCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCC
Confidence 99754321 123457888999999876 468889999999999999999999997532110 011000000
Q ss_pred ------hhhcccccccC--ccccCCC---CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhcccc
Q 000889 1153 ------HREKRINEILD--PELTMQT---SDETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQVD 1210 (1237)
Q Consensus 1153 ------~~~~~~~~~~~--~~l~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~~ 1210 (1237)
........... +...... ..+.....+.+++.+|++.+|++||++.+++++ ++.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 00000000000 0000000 000112356788999999999999999999976 7776543
No 367
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=284.56 Aligned_cols=200 Identities=30% Similarity=0.402 Sum_probs=171.7
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CCEEEEEEecccc---CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVT---GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 1002 (1237)
.+|....+||+|+||.|-+|..+. .+.+|||++++.. ..+.+--+.|-+++.-- +-|.++++..+|+.-++.|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 368888999999999999998774 5679999887532 22223345677777766 468999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+.||+|--.+++. ..+.+..+..+|..||-||-+||++ +|++||+|.+|||+|.+|++||+|||+++.-
T Consensus 429 MEyvnGGDLMyhiQQ~-----GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV-----GKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred EEEecCchhhhHHHHh-----cccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccc
Confidence 9999999999988876 3566777888999999999999999 9999999999999999999999999999843
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCC
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
- -......+.+|||.|+|||.+..++|+.++|+||+||++|||+.|++||++.
T Consensus 501 i--~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 501 I--FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred c--cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 2 2233456899999999999999999999999999999999999999999864
No 368
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=2.4e-30 Score=299.71 Aligned_cols=257 Identities=21% Similarity=0.288 Sum_probs=189.4
Q ss_pred eeccc--CCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 935 MIGSG--GFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 935 ~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
.||+| +||+||+|++. +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++..++..++||||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 99999999985 689999998764322 22356788999999999999999999999999999999999999
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcce
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHL 1089 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~ 1089 (1237)
++.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++||+.+..........
T Consensus 85 ~l~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 85 SANSLLKTYFP---EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99999876432 3588899999999999999999999 99999999999999999999999998654332111110
Q ss_pred e-----eeccccCCCcCCccccCcc--ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc-----
Q 000889 1090 S-----VSTLAGTPGYVPPEYYQSF--RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR----- 1157 (1237)
Q Consensus 1090 ~-----~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 1157 (1237)
. .....++..|||||++.+. .++.++||||+||++|||++|+.||...... ............
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~ 233 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT-----QMLLQKLKGPPYSPLDI 233 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH-----HHHHHHhcCCCCCCccc
Confidence 0 0112345679999999763 4788999999999999999999999643211 000000000000
Q ss_pred --------------------cc----------cccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1158 --------------------IN----------EILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1158 --------------------~~----------~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+. ...+.... ..........+.+++.+|++.||++|||+.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR-TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred cccchhhhhhccchhhhhcccccchhcccccccccccccc-chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00 00000000 00112234568899999999999999999999976
No 369
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=1.4e-30 Score=291.34 Aligned_cols=242 Identities=26% Similarity=0.302 Sum_probs=184.7
Q ss_pred ceecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHH-HhcCCCCcccccceEEeCCeEEEEEEeccC
Q 000889 934 SMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETI-GKIKHRNLVPLLGYCKIGEERLLVYEYMKW 1008 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 1008 (1237)
+.||+|+||.||+|+.. +++.||+|.+...... ....+..|..++ ...+|||++++++++..++..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999886 5789999988543211 122344455443 445899999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
++|.+++... ..+++..+..++.|+++||.|||+. +++||||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 82 GDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 9999998753 3678899999999999999999999 999999999999999999999999999875432
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
.....+++.|+|||.+.+..++.++||||+|+++|||++|..||..... . ....... ..... .....
T Consensus 150 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~---~~~~~~~-~~~~~--~~~~~-- 216 (260)
T cd05611 150 --NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---D---AVFDNIL-SRRIN--WPEEV-- 216 (260)
T ss_pred --cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---H---HHHHHHH-hcccC--CCCcc--
Confidence 1234688899999999888889999999999999999999999964321 1 1111111 11100 00000
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1169 QTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1169 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.......+.+++.+|++.+|++||++.++.+.
T Consensus 217 ---~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 217 ---KEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred ---cccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 00122456788889999999999977544443
No 370
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=3.3e-30 Score=293.43 Aligned_cols=252 Identities=23% Similarity=0.312 Sum_probs=193.6
Q ss_pred CCCCCceecccCCeEEEEEEEC----CCCEEEEEEecccc----CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR----DGSVVAIKKLIHVT----GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 999 (1237)
+|++.+.||+|+||.||+|+.. +|..||+|++.... ....+.+.+|+++++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4778899999999999999873 68899999886422 12235678899999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||++
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 152 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 152 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccc
Confidence 9999999999999998753 3578888999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccCCCcCCccccCcc--ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYVPPEYYQSF--RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR 1157 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1157 (1237)
+........ ......|+..|+|||.+.+. .++.++||||||+++|+|++|+.||...... .....+.......
T Consensus 153 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~-- 227 (290)
T cd05613 153 KEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKS-- 227 (290)
T ss_pred eeccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhcc--
Confidence 865432211 12235688899999998753 4678999999999999999999998643211 1111111111111
Q ss_pred cccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1158 INEILDPELTMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1158 ~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
.+.. +. .....+.+++.+|++.+|++|| ++.+++++
T Consensus 228 -----~~~~--~~---~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 228 -----EPPY--PQ---EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -----CCCC--Cc---cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0111 11 1123566788899999999997 56666544
No 371
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1.7e-30 Score=294.04 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=200.0
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 1002 (1237)
++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999986 68899999876422 223456788999999998 99999999999999999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++...
T Consensus 81 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~ 152 (280)
T cd05581 81 LEYAPNGELLQYIRKY-----GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVL 152 (280)
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence 9999999999999763 3689999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCcc------------------eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCch
Q 000889 1083 NALDTH------------------LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNN 1144 (1237)
Q Consensus 1083 ~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~ 1144 (1237)
...... .......++..|+|||+..+..++.++||||+|+++|++++|+.||.... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~ 227 (280)
T cd05581 153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN-----E 227 (280)
T ss_pred CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc-----H
Confidence 432211 22234567889999999988889999999999999999999999987432 1
Q ss_pred HHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCH----HHHHHH
Q 000889 1145 LVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTM----IQVMAM 1203 (1237)
Q Consensus 1145 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~----~ell~~ 1203 (1237)
....... . +.....+.. ....+.+++.+|++.+|.+||++ .+++++
T Consensus 228 ~~~~~~~-~---------~~~~~~~~~---~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 228 YLTFQKI-L---------KLEYSFPPN---FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHH-H---------hcCCCCCCc---cCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1111110 0 000001111 12356788889999999999999 777654
No 372
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=4e-30 Score=292.27 Aligned_cols=262 Identities=24% Similarity=0.316 Sum_probs=194.6
Q ss_pred CCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCc--CHHHHHHHHHHHHhc---CCCCcccccceEEeCCe-----
Q 000889 930 FSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQ--GDREFMAEMETIGKI---KHRNLVPLLGYCKIGEE----- 998 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 998 (1237)
|++.+.||+|+||.||+|+++. +..||+|++...... ....+.+|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5677899999999999999874 889999988643222 233566788777666 59999999999988776
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1078 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGl 1078 (1237)
.+++|||++ ++|.+++..... ..+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~---~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK---PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCc
Confidence 899999997 589988865322 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1079 ARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1079 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+........ .....++..|+|||++.+..++.++||||||+++|||++|+.||...... .....+..........
T Consensus 154 ~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 154 ARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA--DQLDKIFDVIGLPSEE 228 (287)
T ss_pred ceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH--HHHHHHHHHcCCCChH
Confidence 987643322 12345788999999999888999999999999999999999998753211 1111111111000000
Q ss_pred c---c------ccCccccC--CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 N---E------ILDPELTM--QTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~---~------~~~~~l~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. . ........ ....+.....+.+++.+||+.||.+||++.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0 0 00000000 00011223566789999999999999999999864
No 373
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=3.2e-30 Score=291.36 Aligned_cols=242 Identities=25% Similarity=0.320 Sum_probs=185.3
Q ss_pred eecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHH---HHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 935 MIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEME---TIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
+||+|+||.||+|+.. +++.||+|.+...... ....+..|.. .++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999875 5789999988643211 1222344443 3444579999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
||+|.+++... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~ 152 (278)
T cd05606 81 GGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 152 (278)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC
Confidence 99999888642 4689999999999999999999999 999999999999999999999999999975543221
Q ss_pred ceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
....|+..|+|||++.++ .++.++||||+|+++|||++|+.||........... ... .. ..+...
T Consensus 153 ----~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~---~~~-~~------~~~~~~ 218 (278)
T cd05606 153 ----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI---DRM-TL------TMAVEL 218 (278)
T ss_pred ----cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH---HHH-hh------ccCCCC
Confidence 234689999999998754 688999999999999999999999975432211111 000 00 011111
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRP-----TMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~~ 1203 (1237)
+. . ....+.+++.+|+..+|.+|| ++.+++++
T Consensus 219 ~~--~---~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 219 PD--S---FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CC--c---CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 11 1 123566788899999999999 99999864
No 374
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=1.7e-30 Score=302.20 Aligned_cols=263 Identities=22% Similarity=0.289 Sum_probs=193.6
Q ss_pred CCCC-CCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcC--------------HHHHHHHHHHHHhcCCCCcccccc
Q 000889 928 NGFS-ADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQG--------------DREFMAEMETIGKIKHRNLVPLLG 991 (1237)
Q Consensus 928 ~~~~-~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 991 (1237)
++|. +.+.||+|+||+||+|++. +++.||+|++....... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4555 3567999999999999976 58899999886432221 124678999999999999999999
Q ss_pred eEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCce
Q 000889 992 YCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEA 1071 (1237)
Q Consensus 992 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~v 1071 (1237)
++..++..++||||+. |+|.+++... ..+++.....++.|++.|++|||+. +++||||+|+||+++.++.+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~ 158 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGIC 158 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCE
Confidence 9999999999999997 6899988643 4588999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeeccCC------------cceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCC
Q 000889 1072 RVSDFGMARLVNALD------------THLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSE 1138 (1237)
Q Consensus 1072 kl~DfGla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~ 1138 (1237)
|++|||+++...... .........++..|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999998654111 01111234567889999998764 46889999999999999999999987442
Q ss_pred CCCCchHHHHHHHHhhh--ccccccc------------CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1139 FGDDNNLVGWAKQLHRE--KRINEIL------------DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1139 ~~~~~~~~~~~~~~~~~--~~~~~~~------------~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.. ..+.......... ....... .+.... ........+.+++.+|++.+|++|||+.+++.+
T Consensus 239 ~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 239 EI--DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKT--IFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HH--HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHH--hCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 11 1111100000000 0000000 000000 000112456788899999999999999999975
No 375
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=1.6e-30 Score=302.78 Aligned_cols=265 Identities=23% Similarity=0.311 Sum_probs=193.1
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeC---------
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIG--------- 996 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 996 (1237)
..+|++.+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367899999999999999999886 5889999988765555567788999999999999999999876543
Q ss_pred -----CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC-CCCc
Q 000889 997 -----EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD-ENFE 1070 (1237)
Q Consensus 997 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~-~~~~ 1070 (1237)
...++||||++ ++|.+++.. ..+++..++.++.|+++|++|||+. +|+||||||+||+++ +++.
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 35789999997 588887753 3588999999999999999999999 999999999999997 4567
Q ss_pred eEEeecccceeeccCCcce-eeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHH
Q 000889 1071 ARVSDFGMARLVNALDTHL-SVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGW 1148 (1237)
Q Consensus 1071 vkl~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~ 1148 (1237)
+|++|||.++......... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .....
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~--~~~~~ 231 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE--QMQLI 231 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH
Confidence 8999999998654322111 1123457889999998754 567889999999999999999999996432100 00000
Q ss_pred HHHHh------hh---cccccccCccccCCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1149 AKQLH------RE---KRINEILDPELTMQTSD-----ETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1149 ~~~~~------~~---~~~~~~~~~~l~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..... .. ................. +....++.+++.+|++.+|++|||+.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 232 LESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000 00 00000000000000000 0112356788899999999999999999965
No 376
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=3.6e-30 Score=292.76 Aligned_cols=255 Identities=22% Similarity=0.301 Sum_probs=196.1
Q ss_pred CCCCCceecccCCeEEEEEEEC----CCCEEEEEEecccc----CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR----DGSVVAIKKLIHVT----GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 999 (1237)
+|++.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+++++++ +||||+++++++..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3777889999999999999753 46789999886422 12235678899999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|||++
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~ 152 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLS 152 (288)
T ss_pred EEEEecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccc
Confidence 9999999999999998653 3578889999999999999999999 9999999999999999999999999998
Q ss_pred eeeccCCcceeeeccccCCCcCCccccCccc--cCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYVPPEYYQSFR--CTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR 1157 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1157 (1237)
+........ ......|+..|+|||.+.+.. ++.++||||+|+++|||++|..||...... .............
T Consensus 153 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~-- 227 (288)
T cd05583 153 KEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSEISRRILKS-- 227 (288)
T ss_pred ccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHHHHHHHHcc--
Confidence 765432221 112346888999999987655 788999999999999999999998632211 1111111111110
Q ss_pred cccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1158 INEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1158 ~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
.+.. +.. ....+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 228 -----~~~~--~~~---~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 -----KPPF--PKT---MSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred -----CCCC--Ccc---cCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0111 111 11345678889999999999998888776654
No 377
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=3.2e-30 Score=300.34 Aligned_cols=266 Identities=25% Similarity=0.342 Sum_probs=196.7
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCC-----
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGE----- 997 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 997 (1237)
..++|++.+.||+|+||.||+|... ++..||+|++..... .....+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999865 688999998853221 12345788999999999999999999886543
Q ss_pred -eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 998 -ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 998 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
..++||||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 458999999 6899888753 3688999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHH-----
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAK----- 1150 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~----- 1150 (1237)
|++....... ....+++.|+|||++.+ ..++.++|+||+|+++|++++|+.||...... ........
T Consensus 163 g~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~ 235 (343)
T cd07880 163 GLARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL--DQLMEIMKVTGTP 235 (343)
T ss_pred ccccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCC
Confidence 9997654321 23457889999999876 45888999999999999999999999743210 00000000
Q ss_pred ------HHhhh------cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HHhcccc
Q 000889 1151 ------QLHRE------KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM--FKELQVD 1210 (1237)
Q Consensus 1151 ------~~~~~------~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~~l~~~ 1210 (1237)
..... ..........+.. ........+.+++.+|++.+|++|||+.+++++ ++.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 236 SKEFVQKLQSEDAKNYVKKLPRFRKKDFRS--LLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred CHHHHHhhcchhHHHHHHhccccCcchHHH--hccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence 00000 0000000000000 000112346788899999999999999999955 5555433
No 378
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.7e-30 Score=323.63 Aligned_cols=145 Identities=27% Similarity=0.384 Sum_probs=129.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcC---HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQG---DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
++|++.++||+|+||.||+|++. +++.||+|++....... ...+.+|+.+++.++||||+++++++......|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999987 58899999886432222 356788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccce
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1080 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~ 1080 (1237)
||+.+++|.+++... ..+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999998753 3578888999999999999999999 99999999999999999999999999986
No 379
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=5.5e-30 Score=294.57 Aligned_cols=244 Identities=28% Similarity=0.420 Sum_probs=190.9
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
|...+.||+|+||+||+|+.. ++..|++|++...... ..+.+.+|++++++++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556678999999999999875 5788999988643222 224678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
+. |++.+++... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~- 173 (313)
T cd06633 103 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP- 173 (313)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC-
Confidence 96 6787777543 24689999999999999999999999 999999999999999999999999999864322
Q ss_pred CcceeeeccccCCCcCCccccC---ccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQ---SFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||..... ... ........ .
T Consensus 174 -----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~-~~~~~~~~-~---- 237 (313)
T cd06633 174 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSA-LYHIAQND-S---- 237 (313)
T ss_pred -----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHH-HHHHHhcC-C----
Confidence 12456888999999984 45688899999999999999999999864321 111 11111110 0
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+... .......+.+++.+|++++|++||++.+++++
T Consensus 238 -~~~~----~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 -PTLQ----SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -CCCC----ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110 01112346778889999999999999999976
No 380
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=1.8e-30 Score=302.76 Aligned_cols=269 Identities=25% Similarity=0.300 Sum_probs=197.6
Q ss_pred CHHHHHHHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEe
Q 000889 919 TFAHLLEATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKI 995 (1237)
Q Consensus 919 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 995 (1237)
...++....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 44556677899999999999999999999865 68899999886422 1224567789999999999999999998854
Q ss_pred C------CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC
Q 000889 996 G------EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF 1069 (1237)
Q Consensus 996 ~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~ 1069 (1237)
. ...+++++++ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 3 3467888876 7899887753 3588999999999999999999999 999999999999999999
Q ss_pred ceEEeecccceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHH
Q 000889 1070 EARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGW 1148 (1237)
Q Consensus 1070 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~ 1148 (1237)
.+||+|||+++..... .....++..|+|||++.+ ..++.++||||+||++|||++|+.||...... ......
T Consensus 158 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~--~~~~~~ 230 (345)
T cd07877 158 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--DQLKLI 230 (345)
T ss_pred CEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 9999999999754321 123467889999999866 46788999999999999999999998643211 111110
Q ss_pred HHHHhhh--cccccc-----------cCccccCCCC--CHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1149 AKQLHRE--KRINEI-----------LDPELTMQTS--DETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1149 ~~~~~~~--~~~~~~-----------~~~~l~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
....... .....+ .+........ .......+.+++.+|++.+|++||++.+++++=
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 0000000 000000 0000000000 000123567888999999999999999999873
No 381
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=3.8e-30 Score=296.16 Aligned_cols=267 Identities=25% Similarity=0.343 Sum_probs=192.7
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCc--CHHHHHHHHHHHHhcCCCCcccccceEEeCC------
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKIGE------ 997 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 997 (1237)
.++|++.++||+|+||.||+|++. +++.+|+|++...... ....+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467999999999999999999976 5789999988643222 2345778999999999999999999875433
Q ss_pred --eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEee
Q 000889 998 --ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSD 1075 (1237)
Q Consensus 998 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~D 1075 (1237)
..++||||+. +++...+... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP----SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 4699999997 4677766542 24689999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcce---------eeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchH
Q 000889 1076 FGMARLVNALDTHL---------SVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNL 1145 (1237)
Q Consensus 1076 fGla~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~ 1145 (1237)
||+++......... ......+++.|+|||++.+. .++.++||||+|+++|||++|+.||...... ...
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~--~~~ 236 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI--DQL 236 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH--HHH
Confidence 99997654322111 11234567889999987653 5788999999999999999999998643211 001
Q ss_pred HHHHHHHhhh--------ccccccc----CccccCCC--CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1146 VGWAKQLHRE--------KRINEIL----DPELTMQT--SDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1146 ~~~~~~~~~~--------~~~~~~~----~~~l~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.......... ..+.... ....+... ........+.+++.+|++.+|++|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1100000000 0000000 00000000 000112457789999999999999999998864
No 382
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=4.8e-30 Score=287.10 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=193.6
Q ss_pred CCCCCceecccCCeEEEEEEECC-CCEEEEEEeccc-----cCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHV-----TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
+|.+.+.||+|+||.||+|++.. +..+++|.+... ......++..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 57888999999999999998764 344555544321 112234567799999999999999999999989999999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
|||+++++|.+++..... ....+++..++.++.|+++|+.|||+. +++|+||||+||+++. +.+|++|||.++..
T Consensus 81 ~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 81 TEYCEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEeCCCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeec
Confidence 999999999999876432 235789999999999999999999999 9999999999999975 56999999999765
Q ss_pred ccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1083 NALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1083 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
..... ......|++.|+|||...+..++.++|+||+|+++|+|++|..||.... .......... ..
T Consensus 156 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~~~~~~-~~----- 221 (260)
T cd08222 156 MGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVVLRIVE-GP----- 221 (260)
T ss_pred CCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHc-CC-----
Confidence 43221 1234567889999999988888999999999999999999999986322 1111111110 00
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+.. .......+.+++.+|++.+|++||++.+++++
T Consensus 222 ~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 222 TPSL-----PETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCC-----cchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1111 11223466788889999999999999999875
No 383
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=6.8e-30 Score=289.52 Aligned_cols=262 Identities=25% Similarity=0.342 Sum_probs=197.4
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.++++++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999987 48899999887542 233456788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
+ ++|.+++.... ..+++..+.+++.+++.|++|||+. +|+||||+|+||++++++.+||+|||.++......
T Consensus 81 ~-~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 81 D-MDLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred C-cCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 8 58999997642 3689999999999999999999999 99999999999999999999999999998654322
Q ss_pred cceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh--cc---ccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE--KR---INE 1160 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~---~~~ 1160 (1237)
. ......++..|+|||++.+. .++.++||||+|+++||+++|+.||......+ .+.......... .. +..
T Consensus 153 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 153 R--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID--QLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred c--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHHHHhCCCcHHHHHhhcc
Confidence 2 22334567789999998766 78899999999999999999999986533110 000000000000 00 000
Q ss_pred c--cCccccCCCC------CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1161 I--LDPELTMQTS------DETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1161 ~--~~~~l~~~~~------~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. .+...+.... .+.....+.+++.+|+..+|++||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0 0000000000 00113467889999999999999999999864
No 384
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=4.1e-30 Score=299.59 Aligned_cols=261 Identities=26% Similarity=0.339 Sum_probs=194.8
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCe----
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEE---- 998 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 998 (1237)
..++|++.+.||+|+||.||+|++. ++..||+|++.... ....+.+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4567999999999999999999986 57889999875422 2233557789999999999999999998866554
Q ss_pred --EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeec
Q 000889 999 --RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDF 1076 (1237)
Q Consensus 999 --~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~Df 1076 (1237)
.++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccc
Confidence 89999998 5799998864 3689999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhh-
Q 000889 1077 GMARLVNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHR- 1154 (1237)
Q Consensus 1077 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~- 1154 (1237)
|++...... .....++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...... ..+.........
T Consensus 163 g~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--~~~~~i~~~~~~~ 235 (343)
T cd07851 163 GLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--DQLKRIMNLVGTP 235 (343)
T ss_pred ccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCC
Confidence 999765432 233467889999999865 36788999999999999999999999643211 001000000000
Q ss_pred ---------hcccccccCccccCCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1155 ---------EKRINEILDPELTMQTSD-----ETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1155 ---------~~~~~~~~~~~l~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.......+.......... ......+.+++.+|++.+|++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 236 DEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000000000000000 0113467789999999999999999999886
No 385
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-30 Score=301.00 Aligned_cols=255 Identities=26% Similarity=0.391 Sum_probs=205.5
Q ss_pred HHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEEe-----CC
Q 000889 925 EATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCKI-----GE 997 (1237)
Q Consensus 925 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-----~~ 997 (1237)
..++.|++.++||+|.+|.||+++.. +++.+|+|...... ...++...|.++++.. +|||++.+||++.. ++
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 34566888899999999999999876 57778888765433 4455677899999888 59999999998854 57
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
+.|+|||||.+|+..|.++... +..+.|.....|++.++.|+.+||.+ .++|||||-.|||++.++.||++|||
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFG 168 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFG 168 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeee
Confidence 8999999999999999998654 57899999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccCCCcCCccccCcc-----ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHH
Q 000889 1078 MARLVNALDTHLSVSTLAGTPGYVPPEYYQSF-----RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQL 1152 (1237)
Q Consensus 1078 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1152 (1237)
.+...+. +.....+..|||.|||||++... .|+..+|+||+|++..||..|.+|+-...
T Consensus 169 vSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH-------------- 232 (953)
T KOG0587|consen 169 VSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH-------------- 232 (953)
T ss_pred eeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc--------------
Confidence 9987663 33445778999999999999643 46778999999999999999999975321
Q ss_pred hhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1153 HREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1153 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+...+..+..-..+..........+|.++|..|+.+|.++||++.+++++
T Consensus 233 -PmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 233 -PMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred -hhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 11111111111111111234566788899999999999999999999876
No 386
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-30 Score=246.58 Aligned_cols=263 Identities=24% Similarity=0.341 Sum_probs=193.1
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+|...++||+|.||+||+|+.+ .++.||+|++.-... .......+|+.+++.++|+|||++++....+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 3555678999999999999876 478899998864322 2245678999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
|+ .+|..|..... ..++...++.++.|+++|+.++|++ .+.|||+||+|.++..+|+.|++|||+|+-++-.
T Consensus 83 cd-qdlkkyfdsln----g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 83 CD-QDLKKYFDSLN----GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred hh-HHHHHHHHhcC----CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 96 78888877643 5788899999999999999999999 9999999999999999999999999999866532
Q ss_pred CcceeeeccccCCCcCCccccCccc-cCcccchHHHHHHHHHHHcCCCC-CCCCCCCCCchHHHHHHHHh--hhcc---c
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYYQSFR-CTTKGDVYSYGVILLELLSGKRP-IDPSEFGDDNNLVGWAKQLH--REKR---I 1158 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGv~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~--~~~~---~ 1158 (1237)
- .-.+..+-|..|.+|.++.+.. |++..|+||-||++.|+.....| |.+.... +.+....+... .++. +
T Consensus 155 v--rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd--dqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 155 V--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred e--EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH--HHHHHHHHHhCCCccccCCcc
Confidence 2 1234456789999999998765 88999999999999999985444 5543321 22222222211 1111 1
Q ss_pred ccccCccc----cCCCCCHHHH----HHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPEL----TMQTSDETEL----YQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l----~~~~~~~~~~----~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+.-|... +........+ ..=.++.++.+.-+|..|.++.+.+++
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 11111111 1111111111 112355667777899999999998875
No 387
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=2.6e-29 Score=279.23 Aligned_cols=236 Identities=26% Similarity=0.336 Sum_probs=189.9
Q ss_pred ecccCCeEEEEEEEC-CCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCH
Q 000889 936 IGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSL 1011 (1237)
Q Consensus 936 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 1011 (1237)
||+|+||.||++... +++.+|+|.+...... ....+..|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999986 4889999987643322 345688899999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceee
Q 000889 1012 ESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSV 1091 (1237)
Q Consensus 1012 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~ 1091 (1237)
.+++... ..+++..+..++.|+++|+.|+|+. +++|+||+|+||+++.++.++|+|||.+....... ...
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~ 150 (250)
T cd05123 81 FSHLSKE-----GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRT 150 (250)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC--Ccc
Confidence 9998753 3688999999999999999999998 99999999999999999999999999998664322 122
Q ss_pred eccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCC
Q 000889 1092 STLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTS 1171 (1237)
Q Consensus 1092 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1171 (1237)
....++..|+|||...+..++.++|+||||+++||+++|+.||..... ......... .....+..
T Consensus 151 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~---------~~~~~~~~ 215 (250)
T cd05123 151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR------KEIYEKILK---------DPLRFPEF 215 (250)
T ss_pred cCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhc---------CCCCCCCC
Confidence 345688899999999888889999999999999999999999964321 111111111 11111111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCCHHH
Q 000889 1172 DETELYQYLRISFECLDDRPFKRPTMIQ 1199 (1237)
Q Consensus 1172 ~~~~~~~l~~li~~cl~~dP~~RPt~~e 1199 (1237)
. ...+.+++.+|+..+|++||++.+
T Consensus 216 ~---~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 216 L---SPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred C---CHHHHHHHHHHhcCCHhhCCCccc
Confidence 1 235667888999999999999943
No 388
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=9.2e-31 Score=286.43 Aligned_cols=245 Identities=25% Similarity=0.371 Sum_probs=194.6
Q ss_pred CceecccCCeEEEEEEEC-CCCEEEEEEeccc--cCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 933 DSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV--TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
.++||.|.||+||-|+++ +|+.||||++.+. ....+.++.+|+.+++.++||.||.+-.-|+..+..+.|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 578999999999999876 6999999998643 3455678999999999999999999999999999999999999754
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC---CCceEEeecccceeeccCC
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE---NFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~---~~~vkl~DfGla~~~~~~~ 1086 (1237)
-|+-.+... ...+++...+.++.||+.||.|||.+ +|||+|+||+|||+.. -.++||||||+|+..++..
T Consensus 649 MLEMILSsE----kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 649 MLEMILSSE----KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred HHHHHHHhh----cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 455555432 25789999999999999999999999 9999999999999964 3579999999999887543
Q ss_pred cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccc
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPEL 1166 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1166 (1237)
- ....+|||.|.|||++..+.|...-|+||.||++|--++|..||...+. +.. +.. ....++.+..
T Consensus 722 F---RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-----Ind---QIQ---NAaFMyPp~P 787 (888)
T KOG4236|consen 722 F---RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-----IND---QIQ---NAAFMYPPNP 787 (888)
T ss_pred h---hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-----hhH---Hhh---ccccccCCCc
Confidence 3 2567899999999999999999999999999999999999999975431 110 000 0111111111
Q ss_pred cCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1167 TMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1167 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+.....+++|...+++.-++|-+++..+.+
T Consensus 788 -----W~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 788 -----WSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred -----hhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 12222345677788899999999998887655
No 389
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=278.87 Aligned_cols=258 Identities=25% Similarity=0.357 Sum_probs=194.6
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcC----HHHHHHHHHHHHhcCCCCcccccceEEe-CCe
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQG----DREFMAEMETIGKIKHRNLVPLLGYCKI-GEE 998 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 998 (1237)
++|-...+||+|+|+.||+|.+- ..+.||||.-.... .+. .+...+|.++.+.++||.||++|+|+.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 35666778999999999999865 46678887543211 111 1346789999999999999999999864 567
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC---CCCceEEee
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD---ENFEARVSD 1075 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~---~~~~vkl~D 1075 (1237)
+|-|+|||+|-+|+-|++.. +.+++.+++.|+.||+.||.||.+. .++|||-|+||.|||+- .-|.+||+|
T Consensus 543 FCTVLEYceGNDLDFYLKQh-----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQH-----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred ceeeeeecCCCchhHHHHhh-----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 89999999999999999875 4689999999999999999999988 56899999999999995 458899999
Q ss_pred cccceeeccCCcc-----eeeeccccCCCcCCccccCcc----ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHH
Q 000889 1076 FGMARLVNALDTH-----LSVSTLAGTPGYVPPEYYQSF----RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLV 1146 (1237)
Q Consensus 1076 fGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~ 1146 (1237)
||+++.++..... ......+||..|.+||.+.-+ ..+.|+||||+|||+|.++.|+.||......
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ------ 690 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ------ 690 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH------
Confidence 9999988754432 123567899999999987432 4678999999999999999999999754321
Q ss_pred HHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1147 GWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.....+..+...-.-.++.......+ ...+|++|+++.-++|.++.++...
T Consensus 691 ---QdILqeNTIlkAtEVqFP~KPvVsse---AkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 691 ---QDILQENTILKATEVQFPPKPVVSSE---AKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred ---HHHHhhhchhcceeccCCCCCccCHH---HHHHHHHHHHhhhhhhhhHHHHccC
Confidence 11112222222222223222222233 3456779999999999998887653
No 390
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2e-31 Score=267.44 Aligned_cols=201 Identities=27% Similarity=0.465 Sum_probs=164.9
Q ss_pred CCCCCceecccCCeEEEEEEECC-CCEEEEEEecccc--CcCHHHHHHHHHHHHhcCCCCcccccceEEe--------CC
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVT--GQGDREFMAEMETIGKIKHRNLVPLLGYCKI--------GE 997 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~~ 997 (1237)
.|+...+||+|.||+||+|+.++ ++.||+|++.... ..-.....+|+++++.++|+|++.+++.|.. ..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 34555689999999999998874 6678988775321 1223456889999999999999999998754 23
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
..|+||++|+ -+|..++.... ..++..++.+++.++..||.|+|.. .|+|||+||.||||+.+|.+||+|||
T Consensus 98 t~ylVf~~ce-hDLaGlLsn~~----vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 98 TFYLVFDFCE-HDLAGLLSNRK----VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred eeeeeHHHhh-hhHHHHhcCcc----ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 4799999997 58888886542 4688899999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcc--eeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCC
Q 000889 1078 MARLVNALDTH--LSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1078 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
+|+.+...+.. ..++..+-|..|.+||.+.+. .|+++.|||+-||++.||++|.+-+.+.
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgn 232 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGN 232 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCC
Confidence 99866543322 223456679999999998764 6899999999999999999999888653
No 391
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8e-30 Score=290.85 Aligned_cols=243 Identities=22% Similarity=0.248 Sum_probs=191.6
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
++.|.....+|.|+|+.|-.+.+. +++..+||.+.+.. .+-.+|+.++... +||||+++.+.+.++.+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 556788888999999999988876 57789999886542 2334577666665 69999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee-CCCCceEEeecccceeec
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLL-DENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll-~~~~~vkl~DfGla~~~~ 1083 (1237)
++.|+-+.+.+... +.....+..|+.+++.|+.|||++ ||||||+||+|||+ +..++++|+|||.++...
T Consensus 397 ~l~g~ell~ri~~~------~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 397 LLDGGELLRRIRSK------PEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred hccccHHHHHHHhc------chhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 99999887777653 222267778999999999999999 99999999999999 699999999999998765
Q ss_pred cCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccC
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILD 1163 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1237)
.. ..+.+-|..|.|||++....|+.++|+||+|+++|+|++|+.||.....+ ..+ +.+. ..
T Consensus 468 ~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei------~~~i------~~ 528 (612)
T KOG0603|consen 468 RS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEI------HTRI------QM 528 (612)
T ss_pred hh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHH------HHhh------cC
Confidence 43 34557788999999999999999999999999999999999999755422 011 1111 11
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1164 PELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1164 ~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
+... .... ....+++.+|++.||.+||+|.++..+=..
T Consensus 529 ~~~s--~~vS---~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 529 PKFS--ECVS---DEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred Cccc--cccC---HHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 1111 1112 234567779999999999999999987544
No 392
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=278.12 Aligned_cols=262 Identities=24% Similarity=0.328 Sum_probs=200.2
Q ss_pred hCCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhcC-C-C----CcccccceEEeCCeE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKIK-H-R----NLVPLLGYCKIGEER 999 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~~~~~~~~~~ 999 (1237)
+++|.+...+|+|.||.|-.+.+.. +..||+|+++.+... .+..+-|+++++++. + | -+|.+.+||...++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 6789999999999999999998764 688999988765433 234466999999994 2 3 278889999999999
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC------------
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE------------ 1067 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~------------ 1067 (1237)
|+|+|.+ |-++.+++.... -.+++...++.|+.|++++++|||+. +++|-|+||+||++..
T Consensus 167 Civfell-G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred EEEEecc-ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCc
Confidence 9999988 469999998643 35789999999999999999999999 9999999999999931
Q ss_pred --------CCceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCC
Q 000889 1068 --------NFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEF 1139 (1237)
Q Consensus 1068 --------~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~ 1139 (1237)
...||++|||.|....... ...+.|..|+|||++.+-.++.++||||+|||++|+++|..-|...+.
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 2458999999998654322 456789999999999999999999999999999999999999976541
Q ss_pred CCCchHHHHHHHH----------------hhhccc--------------ccccCccccCCCCCHHHHHHHHHHHHhcccc
Q 000889 1140 GDDNNLVGWAKQL----------------HREKRI--------------NEILDPELTMQTSDETELYQYLRISFECLDD 1189 (1237)
Q Consensus 1140 ~~~~~~~~~~~~~----------------~~~~~~--------------~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~ 1189 (1237)
...+..+.... ...+++ .+...+.-........+...+.+++.+|+..
T Consensus 315 --~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 315 --LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred --HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 11111111000 000000 0001111111112344667899999999999
Q ss_pred CCCCCCCHHHHHHH
Q 000889 1190 RPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1190 dP~~RPt~~ell~~ 1203 (1237)
||.+|+|+.|++.+
T Consensus 393 DP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 393 DPARRITLREALSH 406 (415)
T ss_pred CccccccHHHHhcC
Confidence 99999999999876
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-30 Score=252.15 Aligned_cols=199 Identities=24% Similarity=0.405 Sum_probs=166.6
Q ss_pred CCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc-CcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEec
Q 000889 930 FSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT-GQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
......||+|++|.|-+.++. +|...|+|++...- .+..++...|+.+..+. .+|.+|.+||........|+.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 334567999999999888876 68999999987433 33345677888875554 7999999999988899999999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCC
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALD 1086 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~ 1086 (1237)
+ .+|+.+.++..+ .+..+++...-+|+..+++||.|||++. .|+|||+||+|||++.+|+||+||||.+..+...
T Consensus 128 ~-tSldkfy~~v~~-~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS- 202 (282)
T KOG0984|consen 128 D-TSLDKFYRKVLK-KGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS- 202 (282)
T ss_pred h-hhHHHHHHHHHh-cCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh-
Confidence 7 788887766543 3578999999999999999999999996 8999999999999999999999999999876532
Q ss_pred cceeeeccccCCCcCCccccCc----cccCcccchHHHHHHHHHHHcCCCCCC
Q 000889 1087 THLSVSTLAGTPGYVPPEYYQS----FRCTTKGDVYSYGVILLELLSGKRPID 1135 (1237)
Q Consensus 1087 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwSlGv~l~el~tg~~p~~ 1135 (1237)
...+...|.-.|||||.+.. ..|+-++||||+|+.+.||.+++.||+
T Consensus 203 --iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 203 --IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred --hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 22234578889999998853 378999999999999999999999986
No 394
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.7e-30 Score=264.61 Aligned_cols=200 Identities=26% Similarity=0.377 Sum_probs=173.6
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccC---cCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG---QGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 1001 (1237)
.++|++.++||+|+|+.|..++++ +.+.+|+|++++..- ++.+-...|-.+..+. +||.+|.+..+|+.+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 357899999999999999999987 467789888865332 2333355677777666 69999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
|.||++||+|--+++.. +.++++.++.+...|.-||.|||+. ||++||+|.+||++|..|++|++|||+++.
T Consensus 329 vieyv~ggdlmfhmqrq-----rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred EEEEecCcceeeehhhh-----hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhc
Confidence 99999999998888765 4689999999999999999999999 999999999999999999999999999975
Q ss_pred eccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCC
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDP 1136 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~ 1136 (1237)
--. .....++++|||.|.|||.+.+..|...+|+|++||+|+||+.|+.||+-
T Consensus 401 ~l~--~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 401 GLG--PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred CCC--CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 322 22334689999999999999999999999999999999999999999974
No 395
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2e-30 Score=283.62 Aligned_cols=249 Identities=22% Similarity=0.313 Sum_probs=199.3
Q ss_pred CCCCCceecccCCeEEEEEEECCCC-EEEEEEecc---ccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRDGS-VVAIKKLIH---VTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~~~-~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
+++.+..||-|+||+|-+++.+... .+|.|.+++ +...+.+++..|-++|..++.|.||++|..|.+....||.||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 3455667999999999999887544 377776653 233445568889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
-|-||.+...++++ +.++...++.++..+++|++|||++ +||+||+||+|.++|.+|-+|+.|||+|+....
T Consensus 501 aClGGElWTiLrdR-----g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 501 ACLGGELWTILRDR-----GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhcCchhhhhhhhc-----CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999886 5688888899999999999999999 999999999999999999999999999998765
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
.. +..++||||.|.|||++....++.++|.||+|+++||+++|.+||.+.. .+..|...+..-+.+.. |
T Consensus 573 g~---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~d-----pmktYn~ILkGid~i~~---P 641 (732)
T KOG0614|consen 573 GR---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVD-----PMKTYNLILKGIDKIEF---P 641 (732)
T ss_pred CC---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCc-----hHHHHHHHHhhhhhhhc---c
Confidence 43 3467999999999999999999999999999999999999999997543 23333322222211111 1
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHHH
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPT-----MIQVMAMF 1204 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~~L 1204 (1237)
+. ....-.+++.+..+..|.+|.- +.++.+|-
T Consensus 642 r~--------I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~ 678 (732)
T KOG0614|consen 642 RR--------ITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHR 678 (732)
T ss_pred cc--------cchhHHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence 11 1123346666788889999875 66777664
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=295.04 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=188.5
Q ss_pred CCCCceecccCCeE-EEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccceEEeCCeEEEEEEecc
Q 000889 930 FSADSMIGSGGFGE-VYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
|...+++|.|+.|+ ||+|... ++.||||++.. +-..-..+|+..++.- +|||||++|+.-.+....|++.|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 45566789999875 5999986 88999998854 2233457899999988 59999999999888999999999996
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC---C--CceEEeecccceee
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE---N--FEARVSDFGMARLV 1082 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~---~--~~vkl~DfGla~~~ 1082 (1237)
.+|++++..... ..........+.+..|+++|+++||+. +|||||+||.||||+. + ..++|+|||+++..
T Consensus 587 -~sL~dlie~~~~-d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 587 -CSLQDLIESSGL-DVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred -hhHHHHHhcccc-chhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 899999987311 001111145577889999999999998 9999999999999975 3 57999999999988
Q ss_pred ccCCccee-eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcC-CCCCCCCCCCCCchHHHHHHHHhhhccccc
Q 000889 1083 NALDTHLS-VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSG-KRPIDPSEFGDDNNLVGWAKQLHREKRINE 1160 (1237)
Q Consensus 1083 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1237)
.......+ .....||.+|+|||++....-+.++||+|+||++|+.++| ..||.... ..-+...........
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~-------~R~~NIl~~~~~L~~ 734 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL-------ERQANILTGNYTLVH 734 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH-------HhhhhhhcCccceee
Confidence 76554332 3567799999999999998888899999999999999985 89987432 111111111111111
Q ss_pred ccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1161 ILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1161 ~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+. ...++ +..++|.+|++++|..||++.+|+.|
T Consensus 735 L~--------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 735 LE--------PLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred ec--------cCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 11 11111 45578889999999999999999865
No 397
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=9.1e-29 Score=272.36 Aligned_cols=220 Identities=24% Similarity=0.186 Sum_probs=174.8
Q ss_pred cCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCHHHHHhh
Q 000889 939 GGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLESVLHD 1017 (1237)
Q Consensus 939 G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 1017 (1237)
|.||.||++++. +++.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999986 57899999886432 233455556666799999999999999999999999999999999875
Q ss_pred hhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeeeccccC
Q 000889 1018 RAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGT 1097 (1237)
Q Consensus 1018 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt 1097 (1237)
. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||.+...... .....++
T Consensus 79 ~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~ 145 (237)
T cd05576 79 F-----LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVE 145 (237)
T ss_pred h-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcC
Confidence 4 3588999999999999999999999 9999999999999999999999999988655432 1234457
Q ss_pred CCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHH
Q 000889 1098 PGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELY 1177 (1237)
Q Consensus 1098 ~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1177 (1237)
..|+|||...+..++.++||||+|+++|||++|+.|+...... +........ +.. ...
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----------------~~~~~~~~~--~~~---~~~ 203 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----------------INTHTTLNI--PEW---VSE 203 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----------------cccccccCC--ccc---CCH
Confidence 7899999998888999999999999999999999887532110 000000011 111 123
Q ss_pred HHHHHHHhccccCCCCCCCHH
Q 000889 1178 QYLRISFECLDDRPFKRPTMI 1198 (1237)
Q Consensus 1178 ~l~~li~~cl~~dP~~RPt~~ 1198 (1237)
.+.+++.+|++.||.+||++.
T Consensus 204 ~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHHHccCCHHHhcCCC
Confidence 466788899999999999973
No 398
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.8e-29 Score=279.38 Aligned_cols=206 Identities=26% Similarity=0.367 Sum_probs=173.9
Q ss_pred CCCCCCceecccCCeEEEEEEEC-CCCEEEEEEecccc---CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVT---GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.-|..++.||-|+||+|.+++-. +...+|.|.+.+.. .....++++|-.|+...+.+.||++|..|++++..|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 34777889999999999999754 35578888776422 234456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccce---
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR--- 1080 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~--- 1080 (1237)
||++||++-.+|-+. ..+++..++.++.+++.|+++.|.. |+|||||||+|||||.+|++||+|||++.
T Consensus 709 dYIPGGDmMSLLIrm-----gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRM-----GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred eccCCccHHHHHHHh-----ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccce
Confidence 999999999988764 4688888999999999999999999 99999999999999999999999999985
Q ss_pred ------eeccCCcce-------------------------------eeeccccCCCcCCccccCccccCcccchHHHHHH
Q 000889 1081 ------LVNALDTHL-------------------------------SVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVI 1123 (1237)
Q Consensus 1081 ------~~~~~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~ 1123 (1237)
++...+... ..-..+||+.|+|||++....|+...|+||.|||
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 222111110 0124679999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCC
Q 000889 1124 LLELLSGKRPIDPSEFGD 1141 (1237)
Q Consensus 1124 l~el~tg~~p~~~~~~~~ 1141 (1237)
+|||+.|+.||-.....+
T Consensus 861 l~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred HHHHhhCCCCccCCCCCc
Confidence 999999999997665544
No 399
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=1.4e-28 Score=299.98 Aligned_cols=263 Identities=21% Similarity=0.262 Sum_probs=170.0
Q ss_pred HhCCCCCCceecccCCeEEEEEEECC-----CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccce------EE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLRD-----GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGY------CK 994 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 994 (1237)
..++|++.+.||+|+||.||+|++.+ +..||+|++..... .+.+..| .++...+.+++.++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 35679999999999999999999864 58899998753221 1111111 1222223333333222 23
Q ss_pred eCCeEEEEEEeccCCCHHHHHhhhhcC---------------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 000889 995 IGEERLLVYEYMKWGSLESVLHDRAKG---------------GGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMK 1059 (1237)
Q Consensus 995 ~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDik 1059 (1237)
.+.+.++||||+++++|.+++...... .+.......+..++.|++.||+|||+. +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 567889999999999999998753210 001112344567999999999999999 99999999
Q ss_pred CCCeeeCC-CCceEEeecccceeeccCCcceeeeccccCCCcCCccccCcc----------------------ccCcccc
Q 000889 1060 SSNVLLDE-NFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSF----------------------RCTTKGD 1116 (1237)
Q Consensus 1060 p~NIll~~-~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~sD 1116 (1237)
|+|||++. ++.+||+|||+|+........ ......+++.|||||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 689999999999865432222 22456789999999965322 2344679
Q ss_pred hHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhc----ccccccCccccCC----CC-CHHHHHHHHHHHHhcc
Q 000889 1117 VYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREK----RINEILDPELTMQ----TS-DETELYQYLRISFECL 1187 (1237)
Q Consensus 1117 vwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~----~~-~~~~~~~l~~li~~cl 1187 (1237)
|||+||++|||+++..|++.. ...+.......+ .......+..... .. .........+++.+|+
T Consensus 362 VwSlGviL~el~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSN-------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchH-------HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 999999999999977664321 111111111100 0000011110000 00 0001123447888999
Q ss_pred ccCCCCCCCHHHHHHH
Q 000889 1188 DDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1188 ~~dP~~RPt~~ell~~ 1203 (1237)
+.||++|||+.+++++
T Consensus 435 ~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 435 RFKGRQRISAKAALAH 450 (566)
T ss_pred cCCcccCCCHHHHhCC
Confidence 9999999999999997
No 400
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=5.6e-28 Score=286.53 Aligned_cols=263 Identities=21% Similarity=0.285 Sum_probs=179.1
Q ss_pred HhCCCCCCceecccCCeEEEEEEE-----------------CCCCEEEEEEeccccCcCHHH--------------HHHH
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQL-----------------RDGSVVAIKKLIHVTGQGDRE--------------FMAE 974 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 974 (1237)
..++|++.++||+|+||+||+|.+ ..++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356899999999999999999964 235679999986433222222 3347
Q ss_pred HHHHHhcCCCCc-----ccccceEEe--------CCeEEEEEEeccCCCHHHHHhhhhcC-------------------C
Q 000889 975 METIGKIKHRNL-----VPLLGYCKI--------GEERLLVYEYMKWGSLESVLHDRAKG-------------------G 1022 (1237)
Q Consensus 975 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~ 1022 (1237)
+.++.+++|.++ ++++++|.. .+..++||||+++++|.++++..... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776554 677777653 35689999999999999998753210 1
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCC
Q 000889 1023 GTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVP 1102 (1237)
Q Consensus 1023 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~a 1102 (1237)
...+++..++.++.|+++|++|+|+. +|+||||||+||+++.++.+||+|||+++....... .......+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence 12356778899999999999999999 999999999999999999999999999976543211 11122345789999
Q ss_pred ccccCccc--------------------c--CcccchHHHHHHHHHHHcCCC-CCCCCCCCC------CchHHHHHHHHh
Q 000889 1103 PEYYQSFR--------------------C--TTKGDVYSYGVILLELLSGKR-PIDPSEFGD------DNNLVGWAKQLH 1153 (1237)
Q Consensus 1103 PE~~~~~~--------------------~--~~~sDvwSlGv~l~el~tg~~-p~~~~~~~~------~~~~~~~~~~~~ 1153 (1237)
||.+.... + ..+.||||+||++|+|++|.. ||....... ......|...
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~-- 456 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY-- 456 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh--
Confidence 99875322 1 124799999999999999875 664321110 0011111110
Q ss_pred hhcccccccCccccCCCCCHHHHHHHHHHHHhccccCC---CCCCCHHHHHHH
Q 000889 1154 REKRINEILDPELTMQTSDETELYQYLRISFECLDDRP---FKRPTMIQVMAM 1203 (1237)
Q Consensus 1154 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP---~~RPt~~ell~~ 1203 (1237)
... ...+..... ......+++.+++..+| .+|+|+.|+++|
T Consensus 457 ~~~------~~~~~~~d~---~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 457 KGQ------KYDFSLLDR---NKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ccc------CCCcccccc---cChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000 011111111 12344567778888765 789999999976
No 401
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=9.8e-28 Score=264.83 Aligned_cols=238 Identities=31% Similarity=0.444 Sum_probs=191.7
Q ss_pred CCeEEEEEEECC-CCEEEEEEeccccCcC-HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCHHHHHhh
Q 000889 940 GFGEVYKAQLRD-GSVVAIKKLIHVTGQG-DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLESVLHD 1017 (1237)
Q Consensus 940 ~fg~Vy~~~~~~-~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 1017 (1237)
+||.||+|+... ++.+|+|++....... .+.+.+|++.+++++|+||+++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999874 8899999987554444 67899999999999999999999999999999999999999999999875
Q ss_pred hhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeeeccccC
Q 000889 1018 RAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGT 1097 (1237)
Q Consensus 1018 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt 1097 (1237)
. ..+++..+..++.++++++.|||+. +++|+||+|+||+++.++.++++|||.+....... ......++
T Consensus 81 ~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~ 149 (244)
T smart00220 81 R-----GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGT 149 (244)
T ss_pred c-----cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCC
Confidence 3 2378899999999999999999999 99999999999999999999999999998765432 22445688
Q ss_pred CCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHH
Q 000889 1098 PGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELY 1177 (1237)
Q Consensus 1098 ~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1177 (1237)
..|+|||...+..++.++||||+|+++|++++|..||.... ............. ............
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~~~ 215 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-----QLLELFKKIGKPK---------PPFPPPEWKISP 215 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHHHhccC---------CCCccccccCCH
Confidence 89999999988888999999999999999999999986421 1111111111110 000000000224
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHH
Q 000889 1178 QYLRISFECLDDRPFKRPTMIQVMA 1202 (1237)
Q Consensus 1178 ~l~~li~~cl~~dP~~RPt~~ell~ 1202 (1237)
++.+++.+|+..+|++||++.++++
T Consensus 216 ~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 216 EAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHccCCchhccCHHHHhh
Confidence 6778889999999999999999986
No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.6e-29 Score=256.20 Aligned_cols=262 Identities=26% Similarity=0.348 Sum_probs=190.3
Q ss_pred CCceecccCCeEEEEEEEC-CCCEEEEEEeccccC--cCHHHHHHHHHHHHhcCCCCcccccceEEeC-----CeEEEEE
Q 000889 932 ADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTG--QGDREFMAEMETIGKIKHRNLVPLLGYCKIG-----EERLLVY 1003 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ 1003 (1237)
..+.||-|+||.||.+++. +|+.||.||+..... ...+.+.+|++++..++|.||...++..+-. ++.|.++
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 3567999999999999876 799999999865432 2346788999999999999999998876533 2457777
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
|.|. .+|.+.+-. .+.++...++-+++||++||.|||+. +|.||||||.|.++..+..+||||||+|+..+
T Consensus 137 ELmQ-SDLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 137 ELMQ-SDLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHH-hhhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 8775 566666543 36788888999999999999999999 99999999999999999999999999998654
Q ss_pred cCCcceeeeccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHH---------HHHHHh
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVG---------WAKQLH 1153 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~---------~~~~~~ 1153 (1237)
. +....++..+-|..|+|||.+.|. .|+.++||||.||++.|++..+..|.....-....+.. .++..-
T Consensus 208 ~-d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 208 Q-RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred h-hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 4 334445666778899999999875 58999999999999999999888886543211111100 000000
Q ss_pred hhcccccccCccccCCC--------CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1154 REKRINEILDPELTMQT--------SDETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1154 ~~~~~~~~~~~~l~~~~--------~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
++.-..++......+. +......+-+.+..+++..||++|.+..+.+.+.
T Consensus 287 -EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 287 -EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred -hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 0000111111111100 1111223345666789999999999999998875
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.4e-27 Score=256.44 Aligned_cols=265 Identities=23% Similarity=0.333 Sum_probs=195.4
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcC-----C---CCcccccceEEe--
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIK-----H---RNLVPLLGYCKI-- 995 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~-- 995 (1237)
.++|-+.++||.|.|++||+|.+. ..+.||+|+.+.. ..-.+..+.|++++++++ | .+||+++++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 367889999999999999999876 4667888877543 233455678999999984 3 469999999976
Q ss_pred --CCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC-----
Q 000889 996 --GEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN----- 1068 (1237)
Q Consensus 996 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~----- 1068 (1237)
+.+.|||+|++ |.+|..++..... +.++...+++|++||+.||.|||..| +|||-||||+|||+..+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Y---rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~ 229 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNY---RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPA 229 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCC---CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchh
Confidence 45889999998 6789998876543 56889999999999999999999998 99999999999999210
Q ss_pred --------------------------------------------------------------------------------
Q 000889 1069 -------------------------------------------------------------------------------- 1068 (1237)
Q Consensus 1069 -------------------------------------------------------------------------------- 1068 (1237)
T Consensus 230 ~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~ 309 (590)
T KOG1290|consen 230 KDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRI 309 (590)
T ss_pred hhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 000889 1069 -------------------------------------------------------------------------------- 1068 (1237)
Q Consensus 1069 -------------------------------------------------------------------------------- 1068 (1237)
T Consensus 310 n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~ 389 (590)
T KOG1290|consen 310 NGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPEC 389 (590)
T ss_pred CccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcc
Confidence
Q ss_pred -CceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCC----Cc
Q 000889 1069 -FEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGD----DN 1143 (1237)
Q Consensus 1069 -~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~----~~ 1143 (1237)
-.|||+|||-|+.+. ..++....|..|+||||+.+..|++.+||||++|++|||+||...|++.+..+ .+
T Consensus 390 di~vKIaDlGNACW~~-----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDED 464 (590)
T KOG1290|consen 390 DIRVKIADLGNACWVH-----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDED 464 (590)
T ss_pred ceeEEEeeccchhhhh-----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHH
Confidence 013455555544322 12234456889999999999999999999999999999999999998754322 22
Q ss_pred hHHHHHHHH------------------hhhcccccccCcc-------c-cCCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 000889 1144 NLVGWAKQL------------------HREKRINEILDPE-------L-TMQTSDETELYQYLRISFECLDDRPFKRPTM 1197 (1237)
Q Consensus 1144 ~~~~~~~~~------------------~~~~~~~~~~~~~-------l-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 1197 (1237)
.++.+++-+ .+.+.+..|-.-. + .......++..+|.+++.-|++.+|++||||
T Consensus 465 HiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA 544 (590)
T KOG1290|consen 465 HIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTA 544 (590)
T ss_pred HHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccH
Confidence 233222222 1111122221100 0 0111234567789999999999999999999
Q ss_pred HHHHHH
Q 000889 1198 IQVMAM 1203 (1237)
Q Consensus 1198 ~ell~~ 1203 (1237)
.+++++
T Consensus 545 ~~cl~h 550 (590)
T KOG1290|consen 545 AQCLKH 550 (590)
T ss_pred HHHhcC
Confidence 999987
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.1e-27 Score=241.59 Aligned_cols=251 Identities=22% Similarity=0.366 Sum_probs=187.3
Q ss_pred CCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccc-eEEeCCeEEEEEEe
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLG-YCKIGEERLLVYEY 1005 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~~~~~~lv~e~ 1005 (1237)
.|.+.+.+|+|.||.+-+++++. ...+++|.+ +......++|.+|+..--.+ .|.||+.-|+ .|+..+.+++++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKav-p~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAV-PRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeecc-CcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 58888999999999999999985 456666655 44445677899998876666 4899998887 46777888999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC--CCCceEEeecccceeec
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD--ENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~--~~~~vkl~DfGla~~~~ 1083 (1237)
++.|+|.+-+.. ..+.+...++++.|++.|++|+|++ .+||||||.+||||- +...||+||||..+..+
T Consensus 104 aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 104 APRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred CccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence 999999887754 3577888899999999999999999 999999999999993 34579999999998654
Q ss_pred cCCcceeeeccccCCCcCCccccCcc-----ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1084 ALDTHLSVSTLAGTPGYVPPEYYQSF-----RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1084 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
.. ......+..|.|||+.... ...+.+|||.||+++|.++||..||... ...+..++.|.....+...
T Consensus 175 ~t-----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka-~~~d~~Y~~~~~w~~rk~~- 247 (378)
T KOG1345|consen 175 TT-----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA-SIMDKPYWEWEQWLKRKNP- 247 (378)
T ss_pred ce-----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh-hccCchHHHHHHHhcccCc-
Confidence 32 2234456789999987432 3467799999999999999999999843 3445566666554443321
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCC---CCHHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKR---PTMIQVMAMF 1204 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~ell~~L 1204 (1237)
.+...+ ..-..+.+++..+-+..+|++| .++....+.+
T Consensus 248 --~~P~~F------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 248 --ALPKKF------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred --cCchhh------cccCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 111111 1112345566678899999999 5555555544
No 405
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=1.5e-27 Score=236.66 Aligned_cols=259 Identities=20% Similarity=0.269 Sum_probs=193.7
Q ss_pred hCCCCCCceecccCCeEEEEEEE-CCCCEEEEEEeccccCcCHHHHHHHHHHHHhcC-CCCcccccceEEeC--CeEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQL-RDGSVVAIKKLIHVTGQGDREFMAEMETIGKIK-HRNLVPLLGYCKIG--EERLLV 1002 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 1002 (1237)
.++|++.+++|+|.|++||.|.. .+.+.++||.+++. ..+.+.+|+++++.+. ||||+++++...+. ....+|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 45788899999999999999974 45788999988654 3567889999999997 99999999998764 456899
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC-CCceEEeeccccee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE-NFEARVSDFGMARL 1081 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~-~~~vkl~DfGla~~ 1081 (1237)
+||+.+.+...+.. .++...++.++.++++||.|+|+. ||.|||+||.||++|. .-.++++|+|+|.+
T Consensus 114 FE~v~n~Dfk~ly~--------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP--------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred hhhhccccHHHHhh--------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhh
Confidence 99999888766543 466777888999999999999999 9999999999999994 56799999999988
Q ss_pred eccCCcceeeeccccCCCcCCccccCc-cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc---
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQS-FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR--- 1157 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 1157 (1237)
+.+.... +..+.+..|.-||.+.. ..|+.+-|+|||||++..|+..+.||..... ..+.++..+..+...+-
T Consensus 183 YHp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d-N~DQLVkIakVLGt~el~~Y 258 (338)
T KOG0668|consen 183 YHPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD-NYDQLVKIAKVLGTDELYAY 258 (338)
T ss_pred cCCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC-CHHHHHHHHHHhChHHHHHH
Confidence 7654432 34456778899999865 4588899999999999999999999864321 22334433333222111
Q ss_pred ---cccccCccccC---------------CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1158 ---INEILDPELTM---------------QTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1158 ---~~~~~~~~l~~---------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..-.+|+++.. .....-...+.++++.+.++.|-.+|+|+.|++.+
T Consensus 259 l~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 259 LNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 00111221110 00001112455677778999999999999999875
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=9.4e-28 Score=271.54 Aligned_cols=254 Identities=24% Similarity=0.361 Sum_probs=201.7
Q ss_pred hCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
.++|+....+|.|.||.||||++. .++..|+|.++-....+.+-...|+-+++.++|||||.++|.+...+..|++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 457888999999999999999987 5888999999877777777788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccC
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNAL 1085 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~ 1085 (1237)
|.||+|++..+-. .++++.+...+.+...+|++|||+. +-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 94 cgggslQdiy~~T-----gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita- 164 (829)
T KOG0576|consen 94 CGGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA- 164 (829)
T ss_pred cCCCcccceeeec-----ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh-
Confidence 9999999987653 5788999999999999999999999 999999999999999999999999999876653
Q ss_pred CcceeeeccccCCCcCCcccc---CccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccccccc
Q 000889 1086 DTHLSVSTLAGTPGYVPPEYY---QSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEIL 1162 (1237)
Q Consensus 1086 ~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1237)
+-.+...+.||+.|||||+. ..+.|...+|||+.|+...|+-.-++|...... +.. -.+.. +... -
T Consensus 165 -ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp-----mr~--l~LmT-kS~~--q 233 (829)
T KOG0576|consen 165 -TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP-----MRA--LFLMT-KSGF--Q 233 (829)
T ss_pred -hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch-----HHH--HHHhh-ccCC--C
Confidence 23334678999999999986 355788999999999999999988888432110 000 00000 0000 1
Q ss_pred CccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1163 DPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1163 ~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
.+.+.-.....+ .|-++++.|+.+.|++||++..++++
T Consensus 234 pp~lkDk~kws~---~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 234 PPTLKDKTKWSE---FFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred CCcccCCccchH---HHHHHHHHHhcCCCccCCChhhheec
Confidence 122222222233 34456668999999999999887653
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=4.7e-27 Score=261.48 Aligned_cols=197 Identities=22% Similarity=0.341 Sum_probs=166.8
Q ss_pred hCCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcC--------HHHHHHHHHHHHhcC---CCCcccccceEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQG--------DREFMAEMETIGKIK---HRNLVPLLGYCK 994 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~---h~niv~l~~~~~ 994 (1237)
...|+..+.+|+|+||.|+.|.++. ...|++|.+.+.+--. .-.+-.|+++|.+++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 3468899999999999999999884 5567788775432110 011345999999997 999999999999
Q ss_pred eCCeEEEEEEec-cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEE
Q 000889 995 IGEERLLVYEYM-KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARV 1073 (1237)
Q Consensus 995 ~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl 1073 (1237)
+.+.+|++||-. +|-+|.+++... ..+++.++..|+.||+.|+++||++ +|||||||-+||.++.+|.+|+
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~k-----p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFK-----PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhcc-----CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEE
Confidence 999999999964 455899999764 4689999999999999999999999 9999999999999999999999
Q ss_pred eecccceeeccCCcceeeeccccCCCcCCccccCcccc-CcccchHHHHHHHHHHHcCCCCCC
Q 000889 1074 SDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRC-TTKGDVYSYGVILLELLSGKRPID 1135 (1237)
Q Consensus 1074 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGv~l~el~tg~~p~~ 1135 (1237)
+|||.|...... ....++||.+|.|||++.|..| +..-|||++|+++|-++....||.
T Consensus 712 idfgsaa~~ksg----pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKSG----PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcCC----CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999765432 3456789999999999999887 456899999999999998888874
No 408
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-26 Score=241.98 Aligned_cols=286 Identities=24% Similarity=0.310 Sum_probs=205.5
Q ss_pred CCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccc--cCcCHHHHHHHHHHHHhcCCCCcccccceEEeC------CeE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV--TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIG------EER 999 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 999 (1237)
+|.-.+.+|.|.- .|..|.+. .+++||+|+.... .....+...+|...+..++|+||++++.++.-. .+.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4555677888888 56666544 5889999988642 123345677899999999999999999988533 367
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
|+|||||. .+|..++.. .++-..+..+..|++.|+.|||+. +|+|||+||+||++..++.+||.|||+|
T Consensus 97 y~v~e~m~-~nl~~vi~~-------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 97 YLVMELMD-ANLCQVILM-------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHHHhhh-hHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 99999997 799998873 466678889999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc--
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR-- 1157 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1157 (1237)
+.-+. ....+..+.|..|.|||++.+..+...+||||+||++.||++|+.-|.+. +.+.+|.+.....+.
T Consensus 166 r~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~-----d~idQ~~ki~~~lgtpd 237 (369)
T KOG0665|consen 166 RTEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK-----DHIDQWNKIIEQLGTPD 237 (369)
T ss_pred cccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc-----hHHHHHHHHHHHhcCCC
Confidence 85432 24456677889999999999988999999999999999999999988743 122222211111000
Q ss_pred -------------------------cccc-cCccccCCCCC-HHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HH---
Q 000889 1158 -------------------------INEI-LDPELTMQTSD-ETELYQYLRISFECLDDRPFKRPTMIQVMAM--FK--- 1205 (1237)
Q Consensus 1158 -------------------------~~~~-~~~~l~~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~ell~~--L~--- 1205 (1237)
+.+. -|..++..... .-......+++.+|+-.+|++|-++.+++++ ++
T Consensus 238 ~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~ 317 (369)
T KOG0665|consen 238 PSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWY 317 (369)
T ss_pred HHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeec
Confidence 0111 11111111111 1122344567789999999999999999998 22
Q ss_pred ---hcccc--------cCCCCCCccCchhhHHHHHHHhhc
Q 000889 1206 ---ELQVD--------TEGDSLDSFSLKDTVIEELRERES 1234 (1237)
Q Consensus 1206 ---~l~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 1234 (1237)
+++.. .+.+......|+|.+.+|+++-++
T Consensus 318 ~~~ev~ap~pe~~d~~~d~~~~t~~e~ke~If~ev~~f~~ 357 (369)
T KOG0665|consen 318 DPDEVEAPPPEIYDKQLDEREHTIEEWKELIFKEVQRFEE 357 (369)
T ss_pred ccccccCCCCchhhhhcccccCCHHHHHHHHHHHHHhhcc
Confidence 11111 111112233688888888877665
No 409
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=3.9e-25 Score=238.10 Aligned_cols=211 Identities=35% Similarity=0.566 Sum_probs=182.6
Q ss_pred ecccCCeEEEEEEECC-CCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCHHH
Q 000889 936 IGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLES 1013 (1237)
Q Consensus 936 lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 1013 (1237)
||+|++|.||+++..+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999875 889999988654322 24678999999999999999999999999899999999999999999
Q ss_pred HHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC-CCceEEeecccceeeccCCcceeee
Q 000889 1014 VLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE-NFEARVSDFGMARLVNALDTHLSVS 1092 (1237)
Q Consensus 1014 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~-~~~vkl~DfGla~~~~~~~~~~~~~ 1092 (1237)
++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+........ ...
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~ 151 (215)
T cd00180 81 LLKENE----GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLK 151 (215)
T ss_pred HHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhh
Confidence 987542 3678999999999999999999999 9999999999999999 89999999999986654321 123
Q ss_pred ccccCCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCC
Q 000889 1093 TLAGTPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTS 1171 (1237)
Q Consensus 1093 ~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1171 (1237)
...+...|++||..... .++.++|+|++|++++++
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 35578899999999887 788999999999999999
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 000889 1172 DETELYQYLRISFECLDDRPFKRPTMIQVMAMF 1204 (1237)
Q Consensus 1172 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L 1204 (1237)
..+.+++.+|++.+|++||++.++++++
T Consensus 188 -----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3566888899999999999999998753
No 410
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=1.9e-26 Score=253.26 Aligned_cols=273 Identities=22% Similarity=0.246 Sum_probs=204.0
Q ss_pred cCHHHHHHHhCCCCCCceecccCCeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcC------CCCccccc
Q 000889 918 LTFAHLLEATNGFSADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIK------HRNLVPLL 990 (1237)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~ 990 (1237)
+.+.-.+..-.+|.+....|+|-|++|.+|.+. .|..||||.+.... ...+.=.+|+++++++. --|+++++
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 333334445678999999999999999999876 47799999986422 11233357999999995 34899999
Q ss_pred ceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC-C
Q 000889 991 GYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN-F 1069 (1237)
Q Consensus 991 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~-~ 1069 (1237)
..|....+.|||+|-+. .+|.+++.+.... ..+...++..++.|+.-||..|-.. +|+|.||||+|||+.+. .
T Consensus 501 r~F~hknHLClVFE~Ls-lNLRevLKKyG~n--vGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 501 RHFKHKNHLCLVFEPLS-LNLREVLKKYGRN--VGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKN 574 (752)
T ss_pred HHhhhcceeEEEehhhh-chHHHHHHHhCcc--cceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcc
Confidence 99999999999999885 7999999887553 4577788899999999999999998 99999999999999864 5
Q ss_pred ceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHH
Q 000889 1070 EARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWA 1149 (1237)
Q Consensus 1070 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~ 1149 (1237)
.+||||||.|......+ .+.+.-+..|.|||++.|..|+...|+||.||++||+.||+..|.+..-.. .+..++
T Consensus 575 iLKLCDfGSA~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~--MLrl~m 648 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ--MLRLFM 648 (752)
T ss_pred eeeeccCcccccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHH--HHHHHH
Confidence 68999999997664322 233344567999999999999999999999999999999999998653211 111100
Q ss_pred H-------HHhhhcc---------------------------cccccCc------cc----cCCCCCHHHHHHHHHHHHh
Q 000889 1150 K-------QLHREKR---------------------------INEILDP------EL----TMQTSDETELYQYLRISFE 1185 (1237)
Q Consensus 1150 ~-------~~~~~~~---------------------------~~~~~~~------~l----~~~~~~~~~~~~l~~li~~ 1185 (1237)
+ .+.+.+. +...+.| .+ ..+..+...+..|.+++.+
T Consensus 649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdk 728 (752)
T KOG0670|consen 649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDK 728 (752)
T ss_pred HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 0 0000000 0000111 11 1122234456778889999
Q ss_pred ccccCCCCCCCHHHHHHH
Q 000889 1186 CLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1186 cl~~dP~~RPt~~ell~~ 1203 (1237)
|+..||++|.|..+++++
T Consensus 729 ml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 729 MLILDPEKRITVNQALKH 746 (752)
T ss_pred HhccChhhcCCHHHHhcC
Confidence 999999999999999876
No 411
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=3.8e-27 Score=251.86 Aligned_cols=405 Identities=25% Similarity=0.281 Sum_probs=241.9
Q ss_pred CCcEEecCCCcCCCCCchhHhhhcCCCcEEEcccCcCCCCCCcCcccccccceeeccC-ccccCcccchhccccccceEE
Q 000889 350 NLKQLSLAHNQFAGEIPPELGQACGTLRELDLSSNRLTGELPSTFASCSSLHSLNLGS-NMLSGNFLNTVVSKISSLIYL 428 (1237)
Q Consensus 350 ~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~l~~L~~L 428 (1237)
.-..++|..|+|+ .||+..|+.+++|+.||||+|+|+.+.|++|..+.+|.+|-+.+ |+|+ ......|.++.+|+.|
T Consensus 68 ~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 68 ETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRL 145 (498)
T ss_pred cceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHH
Confidence 3445555555555 55555555555555555555555555555555555555554444 5554 3445555555555555
Q ss_pred eccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCC-CCCCCCCCcccceecccCcee------------eeccccccc
Q 000889 429 YVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPS-GFCSPPNFPALEKIVLPNNYL------------SGTVPLELG 495 (1237)
Q Consensus 429 ~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~~l~~L~~L~L~~N~l------------~~~~~~~l~ 495 (1237)
.+.-|++.-+....|..+++|..|.+.+|.+. .++. .| ..+..++.+.+..|.+ ....|..++
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf---~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~iets 221 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTF---QGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETS 221 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccc---cchhccchHhhhcCccccccccchhhhHHhhchhhcc
Confidence 55555555555555555666666666666555 2232 22 3445555555555542 112344455
Q ss_pred ccccccEecccCCccccCCCccccC-CcCcceeecccccccCcccccccccCCCccEEEccccccccccccccccCCCcc
Q 000889 496 SCKNLKTIDLSFNSLAGPVPSEIWS-LPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNML 574 (1237)
Q Consensus 496 ~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 574 (1237)
...-..-..+.++++..+.+..|.. +..+..-..+.+...+.-|..-|..+++|+.|+|++|+|+++-+.+|.++..++
T Consensus 222 garc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~ 301 (498)
T KOG4237|consen 222 GARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQ 301 (498)
T ss_pred cceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhh
Confidence 5555555566666666554544432 223322233445455577888899999999999999999999999999999999
Q ss_pred EEEeecccccccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEEECCCCccccCC-----ChhHHhhc-----c
Q 000889 575 WVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLDLNSNNLSGPL-----PSELANQA-----G 644 (1237)
Q Consensus 575 ~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~i-----p~~~~~~~-----~ 644 (1237)
+|.|..|+|...-...|.++..|+.|+|.+|+|+...|..|..+.+|.+|+|-.|++.-.- -+|+..-. .
T Consensus 302 eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~ 381 (498)
T KOG4237|consen 302 ELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPR 381 (498)
T ss_pred hhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCC
Confidence 9999999999666677899999999999999999889999999999999999999885321 12221111 0
Q ss_pred cccCccccCccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCcceeccceeeeeccCCcee-EEEccCCcC
Q 000889 645 VVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGMTMYTFTTNGSLI-YLDLSYNSL 723 (1237)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~L~-~LdLs~N~l 723 (1237)
..-|+.+. ++.+.....+ .|.-..++... ......||..- +-+. ...-|++.+
T Consensus 382 Cq~p~~~~--~~~~~dv~~~----------~~~c~~~ee~~-~~~s~~cP~~c-------------~c~~tVvRcSnk~l 435 (498)
T KOG4237|consen 382 CQSPGFVR--QIPISDVAFG----------DFRCGGPEELG-CLTSSPCPPPC-------------TCLDTVVRCSNKLL 435 (498)
T ss_pred CCCCchhc--cccchhcccc----------ccccCCccccC-CCCCCCCCCCc-------------chhhhhHhhcccch
Confidence 00011111 0111000000 00000111100 00001111110 0011 112333344
Q ss_pred CccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCCCcccCcccccceecccc
Q 000889 724 SGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIPGSLGGLSFLSDLDVSNN 793 (1237)
Q Consensus 724 ~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N 793 (1237)
+ .+|.-+- ..-++|++.+|.++ .+|++ .+..| .+|||+|+++-.--..|.++++|..|-||+|
T Consensus 436 k-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 436 K-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred h-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 3 5554332 24568899999999 88887 77888 8999999998666678889999999988887
No 412
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=2.4e-24 Score=234.93 Aligned_cols=199 Identities=33% Similarity=0.505 Sum_probs=172.5
Q ss_pred CCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCc-CHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEecc
Q 000889 930 FSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQ-GDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
|++.+.||+|++|.||+|+..+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667889999999999999875 789999988754443 56678899999999999999999999998899999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
+++|.+++..... .+++.....++.+++.++.|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 81 GGDLFDYLRKKGG----KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred CCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 9999999876421 178899999999999999999999 999999999999999999999999999987654321
Q ss_pred ceeeeccccCCCcCCcccc-CccccCcccchHHHHHHHHHHHcCCCCCCC
Q 000889 1088 HLSVSTLAGTPGYVPPEYY-QSFRCTTKGDVYSYGVILLELLSGKRPIDP 1136 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlGv~l~el~tg~~p~~~ 1136 (1237)
. ......++..|++||.. ....++.++|||++|++++||++|+.||..
T Consensus 154 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 A-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred c-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 1 22345678899999998 666788899999999999999999999964
No 413
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=6.8e-25 Score=238.70 Aligned_cols=201 Identities=29% Similarity=0.435 Sum_probs=167.3
Q ss_pred HHHhCCCCCCceecccCCeEEEEEEECC----CCEEEEEEeccccCcCHHHHHHHHHHHHhcC-CCCcccccceEEeCCe
Q 000889 924 LEATNGFSADSMIGSGGFGEVYKAQLRD----GSVVAIKKLIHVTGQGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEE 998 (1237)
Q Consensus 924 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 998 (1237)
....+.|..+.+||+|.|++||+|++.. ...||+|.+... +....+.+|++++..+. +.||+++.+++..++.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 3445678899999999999999997653 568999998754 34556889999999995 8999999999999999
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC-CCceEEeecc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE-NFEARVSDFG 1077 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~-~~~vkl~DfG 1077 (1237)
..+|+||++..+..++... ++...+..+++.+..||+++|.+ |||||||||+|++.+. .+.-.|+|||
T Consensus 110 v~ivlp~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred eEEEecccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEech
Confidence 9999999999998888763 66788899999999999999999 9999999999999984 5678899999
Q ss_pred cceeeccCC------------------c---------------c---------eeeeccccCCCcCCccccCc-cccCcc
Q 000889 1078 MARLVNALD------------------T---------------H---------LSVSTLAGTPGYVPPEYYQS-FRCTTK 1114 (1237)
Q Consensus 1078 la~~~~~~~------------------~---------------~---------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 1114 (1237)
+|...+... . . .......||++|.|||++.. ...+++
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 997221100 0 0 00124669999999999865 457889
Q ss_pred cchHHHHHHHHHHHcCCCCCCCC
Q 000889 1115 GDVYSYGVILLELLSGKRPIDPS 1137 (1237)
Q Consensus 1115 sDvwSlGv~l~el~tg~~p~~~~ 1137 (1237)
+||||.|||+.-+++++.||...
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a 281 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKA 281 (418)
T ss_pred cceeeccceeehhhccccccccC
Confidence 99999999999999999999754
No 414
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=8.7e-23 Score=270.46 Aligned_cols=285 Identities=21% Similarity=0.221 Sum_probs=168.9
Q ss_pred ccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecccCceeeecccccccccccccE
Q 000889 423 SSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKT 502 (1237)
Q Consensus 423 ~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 502 (1237)
.+|++|++.+|.+. .++..+..+++|+.|+|++|.....+|. + ..+++|+.|+|++|.....+|..+.++++|+.
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-l---s~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~ 685 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-L---SMATNLETLKLSDCSSLVELPSSIQYLNKLED 685 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-c---ccCCcccEEEecCCCCccccchhhhccCCCCE
Confidence 44444444444444 3344555666666666666544334443 2 34566666666666544456666666777777
Q ss_pred ecccCCccccCCCccccCCcCcceeecccccccCcccccccccCCCccEEEccccccccccccccccCCCccEEEeeccc
Q 000889 503 IDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQ 582 (1237)
Q Consensus 503 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 582 (1237)
|++++|..-+.+|..+ ++++|+.|++++|...+.+|.. .++|++|+|++|.+. .+|..+ .+++|++|++.++.
T Consensus 686 L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~ 758 (1153)
T PLN03210 686 LDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMK 758 (1153)
T ss_pred EeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccc-cccccccccccccc
Confidence 7777654434556544 5667777777766555455532 346677777777765 455544 46666666666533
Q ss_pred cc-------ccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEEECCCCccccCCChhHHhhcccccCccccCcc
Q 000889 583 LT-------GEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQ 655 (1237)
Q Consensus 583 l~-------~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 655 (1237)
.. ...|..+...++|+.|+|++|...+.+|..++++++|+.|+|++|+..+.+|..+
T Consensus 759 ~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~---------------- 822 (1153)
T PLN03210 759 SEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI---------------- 822 (1153)
T ss_pred hhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC----------------
Confidence 21 1112222334567777777776666677777777777777777765443444321
Q ss_pred ceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCcceeccceeeeeccCCceeEEEccCCcCCccCCccccCCC
Q 000889 656 FAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGMTMYTFTTNGSLIYLDLSYNSLSGTLPENFGSLN 735 (1237)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~ 735 (1237)
.+.+|++|+|++|..-..+|.. .+
T Consensus 823 -----------------------------------------------------~L~sL~~L~Ls~c~~L~~~p~~---~~ 846 (1153)
T PLN03210 823 -----------------------------------------------------NLESLESLDLSGCSRLRTFPDI---ST 846 (1153)
T ss_pred -----------------------------------------------------CccccCEEECCCCCcccccccc---cc
Confidence 0125667777776544455542 24
Q ss_pred CCcEEEecCcccccccccccccccCCcEEeCCC-CccCCCCCCcccCcccccceecccc
Q 000889 736 YLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSH-NNFQGSIPGSLGGLSFLSDLDVSNN 793 (1237)
Q Consensus 736 ~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~l~l~~N 793 (1237)
+|+.|+|++|.++ .+|.++..+++|+.|+|++ |+|. .+|..+..++.|+.++++++
T Consensus 847 nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 847 NISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred ccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 6667777777776 5677777777777777776 4444 56666677777777777665
No 415
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=3.4e-25 Score=237.00 Aligned_cols=272 Identities=21% Similarity=0.235 Sum_probs=209.8
Q ss_pred ceEEccCCccCCCccccCCcccEEEcCCCCCCCchhhhccccCCCCCCEEEccCCCCCchhhhhcccCCCccEEEccc-c
Q 000889 180 SYVNLSHNSISGGSLHIGPSLLQLDLSGNQISDSALLTYSLSNCQNLNLLNFSDNKLPGKLNATSVNCKSISTIDLSY-N 258 (1237)
Q Consensus 180 ~~L~ls~n~l~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~-N 258 (1237)
..+++++-.++.+|-..++..++|+|..|+|+. +.+.+|+.+++|+.||||+|.|+.+.+++|.++++|.+|-+-+ |
T Consensus 49 ~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~--iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLPPETVEIRLDQNQISS--IPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred ceEEccCCCcccCcccCCCcceEEEeccCCccc--CChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 357888889999999999999999999999987 4467789999999999999999999999999999987775555 8
Q ss_pred cccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCCCceeeccCccccCcccch-hhcccccceEEEecCCccC
Q 000889 259 LLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVITLSQNGLSGTEFPA-SLKNCQLLETLNMSHNALQ 337 (1237)
Q Consensus 259 ~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~l~~l~~L~~L~Ls~N~l~ 337 (1237)
+|+ .+|... ...+.+|+.|.+.-|++. -+....|..+++|..|.+.+|.+.. ++. .+..+..++.+.+..|.+-
T Consensus 127 kI~-~l~k~~-F~gL~slqrLllNan~i~-Cir~~al~dL~~l~lLslyDn~~q~--i~~~tf~~l~~i~tlhlA~np~i 201 (498)
T KOG4237|consen 127 KIT-DLPKGA-FGGLSSLQRLLLNANHIN-CIRQDALRDLPSLSLLSLYDNKIQS--ICKGTFQGLAAIKTLHLAQNPFI 201 (498)
T ss_pred chh-hhhhhH-hhhHHHHHHHhcChhhhc-chhHHHHHHhhhcchhcccchhhhh--hccccccchhccchHhhhcCccc
Confidence 887 444433 245778999999999887 4455678889999999999998844 343 7888888888888888722
Q ss_pred CC------------CchhhhccCCC----------------------CcEE---ecCCCcCCCCCchhHhhhcCCCcEEE
Q 000889 338 GG------------IPGFLLGSFRN----------------------LKQL---SLAHNQFAGEIPPELGQACGTLRELD 380 (1237)
Q Consensus 338 ~~------------~~~~~~~~l~~----------------------L~~L---~L~~n~l~~~ip~~~~~~l~~L~~L~ 380 (1237)
.. .|. .++.++- ++.+ ..+.+...+..|..-|+.+++|+.|+
T Consensus 202 cdCnL~wla~~~a~~~i-etsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ln 280 (498)
T KOG4237|consen 202 CDCNLPWLADDLAMNPI-ETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLN 280 (498)
T ss_pred cccccchhhhHHhhchh-hcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEec
Confidence 11 000 0111111 1222 22334444567777788888888888
Q ss_pred cccCcCCCCCCcCcccccccceeeccCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCc
Q 000889 381 LSSNRLTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFT 460 (1237)
Q Consensus 381 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~ 460 (1237)
|++|+|+.+-+.+|..+..++.|.|..|+|. .+....|.++..|+.|+|.+|+|+...|.+|..+..|..|+|-.|.+.
T Consensus 281 lsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 281 LSNNKITRIEDGAFEGAAELQELYLTRNKLE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred cCCCccchhhhhhhcchhhhhhhhcCcchHH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 8888888888888888888888888888886 456677888888888888888888888888888888888888888765
No 416
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.6e-22 Score=212.04 Aligned_cols=274 Identities=19% Similarity=0.253 Sum_probs=212.6
Q ss_pred CCCCCceecccCCeEEEEEEE-CCCCEEEEEEeccccCcCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEEEec
Q 000889 929 GFSADSMIGSGGFGEVYKAQL-RDGSVVAIKKLIHVTGQGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.|++.++||+|+||+++.|+. -++++||||.-.. .....++..|.+.++.+. .+.|..+|.+..++-+..+|||.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 588999999999999999974 3799999995432 234457888999999985 799999999988888999999988
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC-----CceEEeeccccee
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN-----FEARVSDFGMARL 1081 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~-----~~vkl~DfGla~~ 1081 (1237)
|-+|+|+..-. ++.++...+..+|.|++.-++|+|++ ..|+|||||+|+||... ..+.|+|||+|+.
T Consensus 107 -GPSLEDLFD~C----gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 107 -GPSLEDLFDLC----GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred -CcCHHHHHHHh----cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 68999988765 35799999999999999999999999 99999999999999743 3589999999998
Q ss_pred eccCCccee-----eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhc
Q 000889 1082 VNALDTHLS-----VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREK 1156 (1237)
Q Consensus 1082 ~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1156 (1237)
+....+... ....-||.+||+--...+..-+...|+=|+|-++.+.+-|..||.+........-.+.+....+.-
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence 876655433 245669999999999999999999999999999999999999998765443322222222222222
Q ss_pred ccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCCCCCccCch
Q 000889 1157 RINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGDSLDSFSLK 1222 (1237)
Q Consensus 1157 ~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~~~~~~~~~ 1222 (1237)
.+.+.+. ..++++...++.++ ..+-.+-|+.+-+...+.++......-.--.++|.
T Consensus 259 ~i~~Lc~-------g~P~efa~Yl~yvR---~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~ 314 (449)
T KOG1165|consen 259 PIEVLCE-------GFPEEFATYLRYVR---RLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWM 314 (449)
T ss_pred CHHHHHh-------cCHHHHHHHHHHHH---hcCcccCCCHHHHHHHHHHHHHhcCCccccccccc
Confidence 2222221 23455556666544 46788899999999888887666655555556664
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=2.1e-22 Score=266.88 Aligned_cols=346 Identities=24% Similarity=0.244 Sum_probs=258.7
Q ss_pred CCcCcccccccceeeccCccccC-----cccchhcccc-ccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccC
Q 000889 390 LPSTFASCSSLHSLNLGSNMLSG-----NFLNTVVSKI-SSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTI 463 (1237)
Q Consensus 390 ~~~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 463 (1237)
.+.+|.++++|+.|.+..+.... ...+..+..+ .+|+.|++.++.+. .+|..| ...+|+.|+|++|++. .+
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L 626 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KL 626 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cc
Confidence 44567788888888886654321 0112223333 46888888888876 556666 4688999999999887 45
Q ss_pred CCCCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCcCcceeecccccccCccccccc
Q 000889 464 PSGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGIC 543 (1237)
Q Consensus 464 p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 543 (1237)
+..+ ..+++|+.|+|++|.....+| .++.+++|++|+|++|.....+|..+..+++|+.|++++|...+.+|..+
T Consensus 627 ~~~~---~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i- 701 (1153)
T PLN03210 627 WDGV---HSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI- 701 (1153)
T ss_pred cccc---ccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-
Confidence 6555 467889999998876544555 47888899999999887666888889999999999999876556888765
Q ss_pred ccCCCccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCcc-------ccCCCCCCC
Q 000889 544 VNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSL-------TGQVPQGLG 616 (1237)
Q Consensus 544 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l-------~~~~p~~l~ 616 (1237)
++++|+.|+|++|...+.+|.. .++|++|+|++|.++ .+|..+ .+++|+.|++.++.. ....|..+.
T Consensus 702 -~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~ 775 (1153)
T PLN03210 702 -NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTM 775 (1153)
T ss_pred -CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhh
Confidence 6788999999988766566653 467888999999987 677765 578888888877432 212222233
Q ss_pred CCCCCCEEECCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCc
Q 000889 617 KCRSLVWLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPST 696 (1237)
Q Consensus 617 ~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1237)
..++|+.|+|++|+..+.+|.+++++
T Consensus 776 ~~~sL~~L~Ls~n~~l~~lP~si~~L------------------------------------------------------ 801 (1153)
T PLN03210 776 LSPSLTRLFLSDIPSLVELPSSIQNL------------------------------------------------------ 801 (1153)
T ss_pred ccccchheeCCCCCCccccChhhhCC------------------------------------------------------
Confidence 45688899999988877788766543
Q ss_pred ceeccceeeeeccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCC
Q 000889 697 RIYTGMTMYTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIP 776 (1237)
Q Consensus 697 ~~~~~~~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p 776 (1237)
.+|+.|+|++|..-+.+|..+ ++++|+.|+|++|..-..+|.. ..+|+.|+|++|.++ .+|
T Consensus 802 --------------~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP 862 (1153)
T PLN03210 802 --------------HKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVP 862 (1153)
T ss_pred --------------CCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cCh
Confidence 268999999986556888776 7899999999998766567754 468999999999998 789
Q ss_pred CcccCcccccceeccc-ccccccCCCCCCCCccCCCcccCCCCCCCC
Q 000889 777 GSLGGLSFLSDLDVSN-NNLSGIIPSGGQLTTFPASRYENNSGLCGL 822 (1237)
Q Consensus 777 ~~~~~l~~L~~l~l~~-N~l~g~~p~~~~~~~~~~~~~~~n~~~~~~ 822 (1237)
.++..+++|+.|+|++ |+|.+.++....+..+....+.++..+-..
T Consensus 863 ~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~~L~~~ 909 (1153)
T PLN03210 863 WWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGALTEA 909 (1153)
T ss_pred HHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCcccccc
Confidence 9999999999999998 788887777777777777777776655433
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=9.6e-23 Score=249.43 Aligned_cols=241 Identities=26% Similarity=0.318 Sum_probs=153.6
Q ss_pred CCcEEEccCCcCcccCCCCCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCcCccee
Q 000889 448 QLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDL 527 (1237)
Q Consensus 448 ~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 527 (1237)
+|+.|++++|+++. +|.. .++|++|++++|+|+. +|.. .++|+.|++++|.++ .+|..+ ++|+.|
T Consensus 223 ~L~~L~L~~N~Lt~-LP~l------p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L 287 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPAL------PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKL 287 (788)
T ss_pred CCCEEEccCCcCCC-CCCC------CCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhch---hhcCEE
Confidence 45555555555552 3321 2455555555555553 2321 245666666666665 344322 345566
Q ss_pred ecccccccCcccccccccCCCccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCcc
Q 000889 528 VMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSL 607 (1237)
Q Consensus 528 ~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l 607 (1237)
++++|+++ .+|.. +++|+.|+|++|++++ +|... .+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|
T Consensus 288 ~Ls~N~Lt-~LP~~----p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N~L 354 (788)
T PRK15387 288 WIFGNQLT-SLPVL----PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLT-SLPTL---PSGLQELSVSDNQL 354 (788)
T ss_pred ECcCCccc-ccccc----ccccceeECCCCcccc-CCCCc---ccccccccccCccc-ccccc---ccccceEecCCCcc
Confidence 66666666 45542 3567777777777773 44322 34667777777777 45542 13677888888888
Q ss_pred ccCCCCCCCCCCCCCEEECCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCCCccccCCC
Q 000889 608 TGQVPQGLGKCRSLVWLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGF 687 (1237)
Q Consensus 608 ~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 (1237)
+ .+|... ++|+.|++++|+|+ .+|...
T Consensus 355 s-~LP~lp---~~L~~L~Ls~N~L~-~LP~l~------------------------------------------------ 381 (788)
T PRK15387 355 A-SLPTLP---SELYKLWAYNNRLT-SLPALP------------------------------------------------ 381 (788)
T ss_pred C-CCCCCC---cccceehhhccccc-cCcccc------------------------------------------------
Confidence 7 455432 45677778887776 244210
Q ss_pred ccccCCCCcceeccceeeeeccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCC
Q 000889 688 PMVHSCPSTRIYTGMTMYTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLS 767 (1237)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls 767 (1237)
.+|+.|+|++|+|+ .+|... ++|+.|++++|+|+ .+|..+ .+|+.|+|+
T Consensus 382 -----------------------~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls 430 (788)
T PRK15387 382 -----------------------SGLKELIVSGNRLT-SLPVLP---SELKELMVSGNRLT-SLPMLP---SGLLSLSVY 430 (788)
T ss_pred -----------------------cccceEEecCCccc-CCCCcc---cCCCEEEccCCcCC-CCCcch---hhhhhhhhc
Confidence 14778888888887 466543 56788888888888 477543 467788889
Q ss_pred CCccCCCCCCcccCcccccceecccccccccCCC
Q 000889 768 HNNFQGSIPGSLGGLSFLSDLDVSNNNLSGIIPS 801 (1237)
Q Consensus 768 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~g~~p~ 801 (1237)
+|+|+ .+|.++..++.|+.|+|++|+|+|.+|.
T Consensus 431 ~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 431 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred cCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 99887 7888888888889999999998887774
No 419
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.88 E-value=2.4e-23 Score=268.05 Aligned_cols=197 Identities=18% Similarity=0.212 Sum_probs=138.8
Q ss_pred hcCC-CCcccccceEE-------eCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCC
Q 000889 980 KIKH-RNLVPLLGYCK-------IGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIP 1051 (1237)
Q Consensus 980 ~l~h-~niv~l~~~~~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 1051 (1237)
.++| +||++++++|. +.+..+.+|||+ +++|.++++.. ...+++..++.++.||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~--- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHSQ--- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHhC---
Confidence 3445 57888888772 234567788987 57999999743 24689999999999999999999999
Q ss_pred CeeecCCCCCCeeeCC-------------------CCceEEeecccceeeccCCc--------------ceeeeccccCC
Q 000889 1052 HIIHRDMKSSNVLLDE-------------------NFEARVSDFGMARLVNALDT--------------HLSVSTLAGTP 1098 (1237)
Q Consensus 1052 ~ivHrDikp~NIll~~-------------------~~~vkl~DfGla~~~~~~~~--------------~~~~~~~~gt~ 1098 (1237)
+||||||||+|||++. ++.+|++|||+++....... ........||+
T Consensus 100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 9999999999999954 44566666666653221000 00011245788
Q ss_pred CcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHH
Q 000889 1099 GYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQ 1178 (1237)
Q Consensus 1099 ~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1178 (1237)
.|||||++.+..++.++|||||||++|||++|..|+.... ........ ....+.. ......
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------~~~~~~~~-----~~~~~~~------~~~~~~ 240 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--------RTMSSLRH-----RVLPPQI------LLNWPK 240 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------HHHHHHHH-----hhcChhh------hhcCHH
Confidence 9999999999999999999999999999999988864211 00111100 0111111 011223
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1179 YLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1179 l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
...++.+|++++|.+||++.+++++
T Consensus 241 ~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 241 EASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHHhCCCChhhCcChHHHhhc
Confidence 4567779999999999999999876
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=3e-22 Score=245.16 Aligned_cols=267 Identities=28% Similarity=0.356 Sum_probs=182.1
Q ss_pred ceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEEEcccCcCCCCCCcCcccccccceeec
Q 000889 326 LETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLRELDLSSNRLTGELPSTFASCSSLHSLNL 405 (1237)
Q Consensus 326 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 405 (1237)
-..|+|++|.++ .+|..+. ++|+.|++.+|+++ .+|.. .++|++|+|++|+|+. +|.. .++|+.|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt-~LP~l----p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPAL----PPELRTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCC-CCCCC----CCCCcEEEecCCccCc-ccCc---ccccceeec
Confidence 345566666555 3443321 35666666666665 45531 2556666666666663 3322 245666666
Q ss_pred cCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecccCce
Q 000889 406 GSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNNY 485 (1237)
Q Consensus 406 ~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N~ 485 (1237)
++|.++. .+ ..+.+|+.|++++|+++. +|. ..++|+.|+|++|+|++ +|.. .+.|+.|++++|+
T Consensus 270 s~N~L~~--Lp---~lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l------p~~L~~L~Ls~N~ 333 (788)
T PRK15387 270 FSNPLTH--LP---ALPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL------PSELCKLWAYNNQ 333 (788)
T ss_pred cCCchhh--hh---hchhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC------cccccccccccCc
Confidence 6666552 11 122456666677776663 333 23568888888888874 3432 2357777888888
Q ss_pred eeecccccccccccccEecccCCccccCCCccccCCcCcceeecccccccCcccccccccCCCccEEEcccccccccccc
Q 000889 486 LSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPK 565 (1237)
Q Consensus 486 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~ 565 (1237)
+++ +|.. ..+|+.|+|++|+|+ .+|.. ..+|+.|++++|+++ .+|.. ..+|+.|+|++|+|+ .+|.
T Consensus 334 L~~-LP~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~-~LP~l----~~~L~~LdLs~N~Lt-~LP~ 399 (788)
T PRK15387 334 LTS-LPTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLT-SLPAL----PSGLKELIVSGNRLT-SLPV 399 (788)
T ss_pred ccc-cccc---ccccceEecCCCccC-CCCCC---Ccccceehhhccccc-cCccc----ccccceEEecCCccc-CCCC
Confidence 874 4431 247888999999988 45543 346778889999988 57753 357999999999998 4665
Q ss_pred ccccCCCccEEEeecccccccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEEECCCCccccCCChhHHhhc
Q 000889 566 SIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLDLNSNNLSGPLPSELANQA 643 (1237)
Q Consensus 566 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~ 643 (1237)
. .++|+.|++++|+|+ .+|... .+|+.|+|++|+|+ .+|..++++++|+.|+|++|+|+|.+|..+.++.
T Consensus 400 l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l~ 469 (788)
T PRK15387 400 L---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 469 (788)
T ss_pred c---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHHh
Confidence 4 367999999999999 578643 46889999999999 7999999999999999999999999998886654
No 421
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.88 E-value=2.6e-22 Score=210.08 Aligned_cols=167 Identities=24% Similarity=0.275 Sum_probs=126.4
Q ss_pred CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcc
Q 000889 1009 GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTH 1088 (1237)
Q Consensus 1009 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~ 1088 (1237)
|+|.++++.+ +..+++..++.++.|+++||+|||+. + ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~--- 62 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE--- 62 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc---
Confidence 7899999764 24699999999999999999999999 5 999999999999999 9999866432
Q ss_pred eeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccC
Q 000889 1089 LSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTM 1168 (1237)
Q Consensus 1089 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1168 (1237)
...|++.|||||++.+..++.++|||||||++|||++|+.||..... ............. .. ++.
T Consensus 63 ----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-----~~~~~~~~~~~~~--~~-~~~--- 127 (176)
T smart00750 63 ----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-----LSAILEILLNGMP--AD-DPR--- 127 (176)
T ss_pred ----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-----hcHHHHHHHHHhc--cC-Ccc---
Confidence 22588999999999999999999999999999999999999864321 1111111111100 00 000
Q ss_pred CCCCHHHH---HHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1169 QTSDETEL---YQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1169 ~~~~~~~~---~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
........ ..+.+++.+|+..+|++||++.++++++..+.
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 128 DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 00011111 25788999999999999999999999987654
No 422
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.9e-21 Score=223.35 Aligned_cols=275 Identities=21% Similarity=0.239 Sum_probs=202.4
Q ss_pred CCCCCceecccCCeEEEEEEECCC--CEEEEEEeccccCcCHHHHHHHHHHHHhcCC----CCcccccceE-EeCCeEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRDG--SVVAIKKLIHVTGQGDREFMAEMETIGKIKH----RNLVPLLGYC-KIGEERLL 1001 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 1001 (1237)
+|.+.++||+|+||.||.|..... ..+|+|............+..|..++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999998754 3677776655433333367789999988873 6899999988 47778899
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC-----CceEEeec
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN-----FEARVSDF 1076 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~-----~~vkl~Df 1076 (1237)
||+.+ |.+|.++..... ...++...+.+|+.|++.+|+++|+. |++||||||.|++++.. ..+.+.||
T Consensus 99 VM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 99987 689999876543 36899999999999999999999999 99999999999999864 46999999
Q ss_pred ccceeec--cCCcc----e-e-eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHH
Q 000889 1077 GMARLVN--ALDTH----L-S-VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGW 1148 (1237)
Q Consensus 1077 Gla~~~~--~~~~~----~-~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~ 1148 (1237)
|+|+.+. ..... . . .....||..|+++.+..+...+.+.|+||++.++.|+..|..||...+.... ....
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~--~~~~ 249 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL--KSKF 249 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch--HHHH
Confidence 9998332 22211 1 1 1235699999999999999999999999999999999999999965432211 1111
Q ss_pred HHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCCCCCccCchh
Q 000889 1149 AKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGDSLDSFSLKD 1223 (1237)
Q Consensus 1149 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~~~~~~~~~~ 1223 (1237)
.. ....... .. .....+.+...+. ..+-..+..++|....+.+.++...........+.++|..
T Consensus 250 ~~-~~~~~~~----~~---~~~~~~~~~~~~~---~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~ 313 (322)
T KOG1164|consen 250 EK-DPRKLLT----DR---FGDLKPEEFAKIL---EYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEV 313 (322)
T ss_pred HH-Hhhhhcc----cc---ccCCChHHHHHHH---HHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcccc
Confidence 11 1111111 10 1122233444433 3445589999999999999998876665555556666654
No 423
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-21 Score=196.58 Aligned_cols=280 Identities=17% Similarity=0.195 Sum_probs=211.9
Q ss_pred HhCCCCCCceecccCCeEEEEEEE-CCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCC-CCcccccceEEeCCeEEEEE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQL-RDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKH-RNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 1003 (1237)
..++|.++++||.|+||.+|.|.. .+|+.||+|.-.... .-.++..|.++.+.+++ ..|..+..|..++....+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 356899999999999999999975 479999999765432 23467789999999975 67888888998899999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC---CCceEEeecccce
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE---NFEARVSDFGMAR 1080 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~---~~~vkl~DfGla~ 1080 (1237)
+.. |-+|+++..-.. ..++..++.-++-|++.-++|+|.+ ++|||||||+|+|..- ...+.++|||+|+
T Consensus 91 dLL-GPsLEdLfnfC~----R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCS----RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred ecc-CccHHHHHHHHh----hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchh
Confidence 988 689999887654 3688889999999999999999999 9999999999999974 3468999999999
Q ss_pred eeccCCccee-----eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhh
Q 000889 1081 LVNALDTHLS-----VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHRE 1155 (1237)
Q Consensus 1081 ~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1155 (1237)
.+....+... .....||.+|.+--...+..-+...|+=|+|.++.++-.|..||.+............+......
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s 242 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMS 242 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcC
Confidence 8766554332 23466999999988888777888999999999999999999999875432211111111111111
Q ss_pred cccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcccccCCCCCCccCchhhH
Q 000889 1156 KRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQVDTEGDSLDSFSLKDTV 1225 (1237)
Q Consensus 1156 ~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~~~~~~~~~~~~~~~~~~ 1225 (1237)
..+... +...+.+|...+.-|-...-++-|+..-+.+.+.-+......+.---++|.--.
T Consensus 243 ~~ie~L----------C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lk 302 (341)
T KOG1163|consen 243 TPIEVL----------CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLK 302 (341)
T ss_pred CCHHHH----------hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHH
Confidence 111111 111123445555678888999999999999998888777777776677776443
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=7.1e-22 Score=224.83 Aligned_cols=175 Identities=17% Similarity=0.197 Sum_probs=133.3
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC--CCCEEEEEEecccc-----CcCHHHHHHHHHHHHhcCCCCcccccceEEeCCe
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR--DGSVVAIKKLIHVT-----GQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEE 998 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 998 (1237)
..++|++.+.||+|+||+||+|+++ ++..||||++.... ....+.+.+|++++++++|+|+++.+.. .+.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~ 92 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGK 92 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCC
Confidence 4567999999999999999999875 46778999875321 1124468899999999999999853322 246
Q ss_pred EEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCeeeCCCCceEEeecc
Q 000889 999 RLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDM-KSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 999 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDi-kp~NIll~~~~~vkl~DfG 1077 (1237)
.++||||++|++|... .. .. ...++.++++||+|||+. +|+|||| ||+||+++.++.+||+|||
T Consensus 93 ~~LVmE~~~G~~L~~~-~~--------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 93 DGLVRGWTEGVPLHLA-RP--------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred cEEEEEccCCCCHHHh-Cc--------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 7999999999999632 10 01 145788999999999999 9999999 9999999999999999999
Q ss_pred cceeeccCCccee------eeccccCCCcCCccccCccc------cCcccchH
Q 000889 1078 MARLVNALDTHLS------VSTLAGTPGYVPPEYYQSFR------CTTKGDVY 1118 (1237)
Q Consensus 1078 la~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~------~~~~sDvw 1118 (1237)
+|+.+........ .....+++.|+|||++...+ .+..+|-|
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9997755332221 23567888999999986432 23346666
No 425
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.85 E-value=7.1e-22 Score=200.84 Aligned_cols=247 Identities=24% Similarity=0.411 Sum_probs=183.7
Q ss_pred CCceecccCCeEEEEEEECCCCEEEEEEec--cccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCC
Q 000889 932 ADSMIGSGGFGEVYKAQLRDGSVVAIKKLI--HVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
...+|.+...|+.|+|+++ |..+++|.+. .......++|..|.-.++-+.||||.++++.|.......++..||+.|
T Consensus 194 l~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 3457889999999999998 5555666554 233334568999999999999999999999999999999999999999
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEe--ecccceeeccCCc
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVS--DFGMARLVNALDT 1087 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~--DfGla~~~~~~~~ 1087 (1237)
+|+.++++.. ...++..++.+++.++|+|++|||+.. +-|..--+.+..|++|++.+++|. |--++.
T Consensus 273 slynvlhe~t---~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsf------- 341 (448)
T KOG0195|consen 273 SLYNVLHEQT---SVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSF------- 341 (448)
T ss_pred HHHHHHhcCc---cEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeee-------
Confidence 9999998753 346788899999999999999999984 223334578899999999888874 221111
Q ss_pred ceeeeccccCCCcCCccccCccccC---cccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCc
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCT---TKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDP 1164 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1237)
......-.|.||+||.+...+-+ .++|+|||++++||+.|...||..-...+-..... .+. +..
T Consensus 342 --qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia-------leg----lrv 408 (448)
T KOG0195|consen 342 --QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA-------LEG----LRV 408 (448)
T ss_pred --eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-------hcc----ccc
Confidence 11233457899999999876543 47999999999999999999997544332111110 011 111
Q ss_pred cccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1165 ELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1165 ~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
.+ +.. ....+.+++.-|+..||.+||.++.++-.|++++
T Consensus 409 ~i--ppg---is~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 409 HI--PPG---ISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cC--CCC---ccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 11 111 2234556667799999999999999999998764
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=4.4e-21 Score=237.01 Aligned_cols=79 Identities=29% Similarity=0.528 Sum_probs=40.4
Q ss_pred ccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEEECCC
Q 000889 549 LETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLDLNS 628 (1237)
Q Consensus 549 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 628 (1237)
|+.|++++|+++ .+|..+. ++|+.|++++|.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++
T Consensus 306 L~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~ 376 (754)
T PRK15370 306 ITHLNVQSNSLT-ALPETLP--PGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSR 376 (754)
T ss_pred HHHHHhcCCccc-cCCcccc--ccceeccccCCccc-cCChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCC
Confidence 444444444444 2333221 34555555555555 3454443 45666666666665 4454442 4566666666
Q ss_pred CccccCCCh
Q 000889 629 NNLSGPLPS 637 (1237)
Q Consensus 629 N~l~g~ip~ 637 (1237)
|+|+ .+|.
T Consensus 377 N~Lt-~LP~ 384 (754)
T PRK15370 377 NALT-NLPE 384 (754)
T ss_pred CcCC-CCCH
Confidence 6665 3444
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=4.4e-21 Score=232.97 Aligned_cols=254 Identities=23% Similarity=0.282 Sum_probs=187.0
Q ss_pred CCceecccCCeEEEEEEEC-CCCEEEEEEeccc--cCcCHHH----HHHHHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 932 ADSMIGSGGFGEVYKAQLR-DGSVVAIKKLIHV--TGQGDRE----FMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~----~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
...++|.|++|.|+.+... ..+.++.|..... .....+. +..|+.+-..++|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 3568999999988887654 3444444433210 2222222 5568888888999999988888777766666699
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
||++ +|..++... ..+...++..++.|+..|+.|+|+. ||.|||+|++|++++.+|.+||+|||.+..+..
T Consensus 402 ~~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred cccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeecc
Confidence 9998 999998763 3577888899999999999999999 999999999999999999999999999987665
Q ss_pred CCcc--eeeeccccCCCcCCccccCccccCc-ccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccc
Q 000889 1085 LDTH--LSVSTLAGTPGYVPPEYYQSFRCTT-KGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEI 1161 (1237)
Q Consensus 1085 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~-~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1237)
.... ......+|+..|+|||++.+..|+. .+||||.|+++..|.+|+.||......++... ...........
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~-----~~~~~~~~~~~ 547 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK-----TNNYSDQRNIF 547 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh-----hhccccccccc
Confidence 4443 4446788999999999999988875 58999999999999999999986554333210 00000111110
Q ss_pred cCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1162 LDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1162 ~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
..+... ......+-..++.+|++.+|.+|.|+.++++.
T Consensus 548 ~~~~~~----~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 548 EGPNRL----LSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred cChHHH----HHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 000000 01223445678889999999999999999863
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=1.2e-20 Score=233.11 Aligned_cols=246 Identities=26% Similarity=0.462 Sum_probs=129.5
Q ss_pred cceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecccCceeeecccccccccccccEe
Q 000889 424 SLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTI 503 (1237)
Q Consensus 424 ~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 503 (1237)
+...|+++++.++. +|..+. +.|+.|+|++|+|+ .+|..+ .++|+.|++++|+++. +|..+. .+|+.|
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l-----~~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L 246 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENL-----QGNIKTLYANSNQLTS-IPATLP--DTIQEM 246 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhh-----ccCCCEEECCCCcccc-CChhhh--ccccEE
Confidence 45667777777763 444442 46777777777776 344433 1245555555555542 333222 244555
Q ss_pred cccCCccccCCCccccCCcCcceeecccccccCcccccccccCCCccEEEccccccccccccccccCCCccEEEeecccc
Q 000889 504 DLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQL 583 (1237)
Q Consensus 504 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 583 (1237)
+|++|++. .+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|+|++|+|
T Consensus 247 ~Ls~N~L~-------------------------~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~L 295 (754)
T PRK15370 247 ELSINRIT-------------------------ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSI 295 (754)
T ss_pred ECcCCccC-------------------------cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcc
Confidence 55555544 4444332 24555555555555 3444432 3555666666665
Q ss_pred cccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEEECCCCccccCCChhHHhhcccccCccccCccceeeccCC
Q 000889 584 TGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEG 663 (1237)
Q Consensus 584 ~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (1237)
+ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|.+++ +|..+.
T Consensus 296 t-~LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~----------------------- 345 (754)
T PRK15370 296 R-TLPAHLP--SGITHLNVQSNSLT-ALPETLP--PGLKTLEAGENALTS-LPASLP----------------------- 345 (754)
T ss_pred c-cCcccch--hhHHHHHhcCCccc-cCCcccc--ccceeccccCCcccc-CChhhc-----------------------
Confidence 5 3444332 24566666666665 3444332 456666666666652 332210
Q ss_pred CccccCCCCcccccCCCccccCCCccccCCCCcceeccceeeeeccCCceeEEEccCCcCCccCCccccCCCCCcEEEec
Q 000889 664 GTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGMTMYTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLG 743 (1237)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls 743 (1237)
.+|+.|+|++|+|+ .+|..+. ++|+.|+|+
T Consensus 346 -----------------------------------------------~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs 375 (754)
T PRK15370 346 -----------------------------------------------PELQVLDVSKNQIT-VLPETLP--PTITTLDVS 375 (754)
T ss_pred -----------------------------------------------CcccEEECCCCCCC-cCChhhc--CCcCEEECC
Confidence 13566666666665 4555442 456666666
Q ss_pred CcccccccccccccccCCcEEeCCCCccCCCCCCcc----cCcccccceeccccccc
Q 000889 744 HNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIPGSL----GGLSFLSDLDVSNNNLS 796 (1237)
Q Consensus 744 ~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~l~l~~N~l~ 796 (1237)
+|+|+ .+|+.+. ..|+.||+++|+|. .+|..+ +.++.+..|+|.+|+|+
T Consensus 376 ~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 376 RNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 66666 4555443 24666666666665 444433 23355666666666665
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=5e-19 Score=205.43 Aligned_cols=260 Identities=28% Similarity=0.400 Sum_probs=196.4
Q ss_pred CCCCceecccCCeEEEEEEECCCCEEEEEEeccccCc---CHHHHHHHHHHHHhcCCC-CcccccceEEeCCeEEEEEEe
Q 000889 930 FSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQ---GDREFMAEMETIGKIKHR-NLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
|.+.+.||.|+||.||++.+. ..+++|.+...... ....+.+|+.+++.+.|+ +++++++++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999987 77888988654333 356789999999999988 799999999777778999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC-ceEEeecccceeecc
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF-EARVSDFGMARLVNA 1084 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~-~vkl~DfGla~~~~~ 1084 (1237)
+.++++.+++...... ..+.......+..|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++....
T Consensus 80 ~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 80 VDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred CCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 9999999776653211 2688889999999999999999999 999999999999999988 799999999986654
Q ss_pred CCcce----eeeccccCCCcCCccccCc---cccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhc-
Q 000889 1085 LDTHL----SVSTLAGTPGYVPPEYYQS---FRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREK- 1156 (1237)
Q Consensus 1085 ~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~- 1156 (1237)
..... ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||...... ..............
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~ 232 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS--SATSQTLKIILELPT 232 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc--ccHHHHHHHHHhcCC
Confidence 33221 2356789999999999987 57888999999999999999999997643311 00011111111110
Q ss_pred c-cccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1157 R-INEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1157 ~-~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
. .......... ......+.+++..|+..+|..|.++.+....
T Consensus 233 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 233 PSLASPLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0 0000000000 1122456678889999999999999988775
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.8e-19 Score=190.25 Aligned_cols=171 Identities=12% Similarity=0.141 Sum_probs=133.6
Q ss_pred HhCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHH---------HHHHHHHHHhcCCCCcccccceEEeC
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDRE---------FMAEMETIGKIKHRNLVPLLGYCKIG 996 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~~~~~~~ 996 (1237)
..++|+..+++|.|+||.||++.. ++..+|+|.+........+. +.+|++.+.++.||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 478899999999999999999766 57789999887544333332 57899999999999999999986543
Q ss_pred --------CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC
Q 000889 997 --------EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN 1068 (1237)
Q Consensus 997 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~ 1068 (1237)
...++||||++|.+|.++.. ++. ....++++++..+|+. +++|||+||+||+++.+
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKN 171 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCC
Confidence 35789999999999988632 222 2455899999999999 99999999999999998
Q ss_pred CceEEeecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHH
Q 000889 1069 FEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELL 1128 (1237)
Q Consensus 1069 ~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~ 1128 (1237)
| ++++|||........... ..+.....+..++|+|+||+.+....
T Consensus 172 g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 8 999999988654321110 01333445667899999999987654
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=6.9e-19 Score=184.68 Aligned_cols=140 Identities=15% Similarity=0.155 Sum_probs=109.0
Q ss_pred CceecccCCeEEEEEEECCCCEEEEEEeccccCc--C-------HH-----------------HHHHHHHHHHhcCCCCc
Q 000889 933 DSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQ--G-------DR-----------------EFMAEMETIGKIKHRNL 986 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~-----------------~~~~E~~~l~~l~h~ni 986 (1237)
...||+|+||.||+|+..+|+.||+|++...... . .. ....|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4579999999999999888999999998643211 1 01 12349999999988877
Q ss_pred ccccceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCCCCCeee
Q 000889 987 VPLLGYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFL-HHSCIPHIIHRDMKSSNVLL 1065 (1237)
Q Consensus 987 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivHrDikp~NIll 1065 (1237)
.....+.. ...++||||++|+++...... ...++...+..++.|++.+|+|+ |+. +|+||||||+||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli 151 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLY 151 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEE
Confidence 54443322 234899999998877654322 13678889999999999999999 688 99999999999999
Q ss_pred CCCCceEEeecccceeec
Q 000889 1066 DENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1066 ~~~~~vkl~DfGla~~~~ 1083 (1237)
+ ++.++++|||+|...+
T Consensus 152 ~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 152 H-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred E-CCcEEEEEccccccCC
Confidence 8 4789999999997543
No 432
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=1.2e-20 Score=179.54 Aligned_cols=166 Identities=37% Similarity=0.595 Sum_probs=110.7
Q ss_pred cCCCccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEE
Q 000889 545 NGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWL 624 (1237)
Q Consensus 545 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 624 (1237)
++.+++.|.||+|+++ .+|..++.+.+|+.|++++|+|+ .+|.+++.|++|+.|+++-|++. .+|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3455666777777777 66777777777777777777777 67777777777777777777777 677777777777777
Q ss_pred ECCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCcceecccee
Q 000889 625 DLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGMTM 704 (1237)
Q Consensus 625 ~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (1237)
||..|+++.
T Consensus 108 dltynnl~e----------------------------------------------------------------------- 116 (264)
T KOG0617|consen 108 DLTYNNLNE----------------------------------------------------------------------- 116 (264)
T ss_pred hcccccccc-----------------------------------------------------------------------
Confidence 777777652
Q ss_pred eeeccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCCCcccCccc
Q 000889 705 YTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIPGSLGGLSF 784 (1237)
Q Consensus 705 ~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~ 784 (1237)
..+|..|..++.|+-|+|++|.|. .+|+.++.|++|+.|.+.+|.+- .+|.+++.++.
T Consensus 117 --------------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~ 174 (264)
T KOG0617|consen 117 --------------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTR 174 (264)
T ss_pred --------------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHH
Confidence 134555555555666666666665 55666666666666666666665 56666666666
Q ss_pred ccceecccccccccCCCCCCCC
Q 000889 785 LSDLDVSNNNLSGIIPSGGQLT 806 (1237)
Q Consensus 785 L~~l~l~~N~l~g~~p~~~~~~ 806 (1237)
|+.|.+.+|+|+-.+|+.+++.
T Consensus 175 lrelhiqgnrl~vlppel~~l~ 196 (264)
T KOG0617|consen 175 LRELHIQGNRLTVLPPELANLD 196 (264)
T ss_pred HHHHhcccceeeecChhhhhhh
Confidence 6666666666666666554443
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=6.3e-18 Score=174.15 Aligned_cols=186 Identities=16% Similarity=0.102 Sum_probs=138.9
Q ss_pred CCCceecccCCeEEEEEEECCCCEEEEEEeccccCcC----HHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEEEe
Q 000889 931 SADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQG----DREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 931 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
.+...|++|+||+||.+.. .+..++.+.+....... .+.+.+|++++++++ |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999998876 57777777665433211 124788999999995 5889999886 456999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCeeeCCCCceEEeecccceeecc
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDM-KSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDi-kp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
+.|.+|...... ....++.|++++++|+|+. ||+|||| ||+||+++.++.++|+|||+|.....
T Consensus 80 I~G~~L~~~~~~------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 80 LAGAAMYQRPPR------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP 144 (218)
T ss_pred ecCccHHhhhhh------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence 999998654311 0134678899999999999 9999999 79999999999999999999986543
Q ss_pred CCcc----e-------eeeccccCCCcCCccccCcc-ccC-cccchHHHHHHHHHHHcCCCCCCC
Q 000889 1085 LDTH----L-------SVSTLAGTPGYVPPEYYQSF-RCT-TKGDVYSYGVILLELLSGKRPIDP 1136 (1237)
Q Consensus 1085 ~~~~----~-------~~~~~~gt~~y~aPE~~~~~-~~~-~~sDvwSlGv~l~el~tg~~p~~~ 1136 (1237)
.... . .......++.|++|+...-. ..+ ...+.++-|.-+|.++|++.++-.
T Consensus 145 ~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 145 RARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 2210 0 01123468888999865432 223 457999999999999999988643
No 434
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.76 E-value=1.1e-17 Score=176.69 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=110.3
Q ss_pred CceecccCCeEEEEEEECCCCEEEEEEeccccCc---------------------C-----HHHHHHHHHHHHhcCCCCc
Q 000889 933 DSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQ---------------------G-----DREFMAEMETIGKIKHRNL 986 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~ni 986 (1237)
...||+|+||.||+|++.+|+.||||++...... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999888999999988753211 0 1123578999999999987
Q ss_pred ccccceEEeCCeEEEEEEeccCCCHHHH-HhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCee
Q 000889 987 VPLLGYCKIGEERLLVYEYMKWGSLESV-LHDRAKGGGTKLDWAARKKIAIGSARGLAFLHH-SCIPHIIHRDMKSSNVL 1064 (1237)
Q Consensus 987 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrDikp~NIl 1064 (1237)
.....+... ..++||||++|+++... +.. ..++.....+++.+++.++.|+|+ . +|+||||||+||+
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIl 150 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNIL 150 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEE
Confidence 555444332 34899999998865433 322 356778889999999999999999 8 9999999999999
Q ss_pred eCCCCceEEeecccceeec
Q 000889 1065 LDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1065 l~~~~~vkl~DfGla~~~~ 1083 (1237)
++ ++.++|+|||+|....
T Consensus 151 l~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 151 YH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred EE-CCCEEEEEcccceecC
Confidence 99 7899999999998654
No 435
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.75 E-value=7.1e-18 Score=183.51 Aligned_cols=232 Identities=21% Similarity=0.281 Sum_probs=146.5
Q ss_pred CCceecccCCeEEEEEEECC-CCEEEEEEeccccC---cCHHHHHHHHHHHHhcCC----------CCcccccce-----
Q 000889 932 ADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTG---QGDREFMAEMETIGKIKH----------RNLVPLLGY----- 992 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h----------~niv~l~~~----- 992 (1237)
..+.||.|+++.||.+++.. ++.+|+|.+..... ...+++.+|.-....+.+ -.++..++.
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 45689999999999999984 88999998864332 223456666554444322 122222222
Q ss_pred ----EEeCC--------eEEEEEEeccCCCHHHHHhhhhcCC--CCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 000889 993 ----CKIGE--------ERLLVYEYMKWGSLESVLHDRAKGG--GTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDM 1058 (1237)
Q Consensus 993 ----~~~~~--------~~~lv~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDi 1058 (1237)
+.... ..+++|+-+. ++|.+++..-.... ........+..+..|+++.+++||+. |+||+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 11111 2367888775 78888865321111 22345556677889999999999999 9999999
Q ss_pred CCCCeeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCc--------cccCcccchHHHHHHHHHHHcC
Q 000889 1059 KSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQS--------FRCTTKGDVYSYGVILLELLSG 1130 (1237)
Q Consensus 1059 kp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwSlGv~l~el~tg 1130 (1237)
||+|++++++|.++++||+.....+. .. .....+..|.+||.... ..++.+.|.|++|+++|.+++|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~---~~--~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGT---RY--RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTE---EE--EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCc---ee--eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 99999999999999999998875542 11 11345678999998744 2578899999999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCC
Q 000889 1131 KRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKR 1194 (1237)
Q Consensus 1131 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~R 1194 (1237)
..||+.......... .+ .. +....+.+..+|..+++.+|++|
T Consensus 247 ~lPf~~~~~~~~~~~-------------------~f--~~-C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW-------------------DF--SR-CRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG-------------------GG--TT-SS---HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc-------------------cc--hh-cCCcCHHHHHHHHHHccCCcccC
Confidence 999985432221111 11 11 11444567788889999999988
No 436
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.74 E-value=1.1e-17 Score=193.31 Aligned_cols=219 Identities=26% Similarity=0.455 Sum_probs=165.8
Q ss_pred HHhcCCCCcccccceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCe-eec
Q 000889 978 IGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHI-IHR 1056 (1237)
Q Consensus 978 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i-vHr 1056 (1237)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+... ...+++.....+..++++|++|+|+. +| .|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~----~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE----DIKLDYFFILSFIRDISKGLAYLHNS---PIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc----ccCccHHHHHHHHHHHHHHHHHHhcC---cceeee
Confidence 46788999999999999999999999999999999999763 35789999999999999999999998 55 999
Q ss_pred CCCCCCeeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCcc---c----cCcccchHHHHHHHHHHHc
Q 000889 1057 DMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSF---R----CTTKGDVYSYGVILLELLS 1129 (1237)
Q Consensus 1057 Dikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~----~~~~sDvwSlGv~l~el~t 1129 (1237)
.++++|.++|....+|++|||+.................-..-|.|||.+.+. . .+.+.||||||++++|+++
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred eeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 99999999999999999999998766431111111222345579999999763 1 4667999999999999999
Q ss_pred CCCCCCCCCCCCCc-hHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHhcc
Q 000889 1130 GKRPIDPSEFGDDN-NLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKELQ 1208 (1237)
Q Consensus 1130 g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~l~ 1208 (1237)
.+.||+........ ....+.. . .-.....|...... +....+..++.+||..+|.+||++.++-..++.+.
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~---~--~~~~~~rP~i~~~~---e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVK---K--GGSNPFRPSIELLN---ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred ccCccccccccCChHHHHHHHH---h--cCCCCcCcchhhhh---hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 99999864333221 1222211 1 11112222222111 22235778888999999999999999999998876
Q ss_pred ccc
Q 000889 1209 VDT 1211 (1237)
Q Consensus 1209 ~~~ 1211 (1237)
...
T Consensus 226 ~~~ 228 (484)
T KOG1023|consen 226 KGG 228 (484)
T ss_pred ccc
Confidence 654
No 437
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=2.5e-17 Score=176.76 Aligned_cols=198 Identities=21% Similarity=0.263 Sum_probs=136.3
Q ss_pred CCCCcccccceEEeC---------------------------CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHH
Q 000889 982 KHRNLVPLLGYCKIG---------------------------EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKI 1034 (1237)
Q Consensus 982 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 1034 (1237)
+|||||++.++|.+. ...|+||..++ .+|..|+..+ ..+.....-|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~------~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR------HRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC------CCchHHHHHH
Confidence 599999999977441 24589998876 7899998764 4455667778
Q ss_pred HHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC--CC--CceEEeecccceeeccCCcc----eeeeccccCCCcCCcccc
Q 000889 1035 AIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD--EN--FEARVSDFGMARLVNALDTH----LSVSTLAGTPGYVPPEYY 1106 (1237)
Q Consensus 1035 ~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~--~~--~~vkl~DfGla~~~~~~~~~----~~~~~~~gt~~y~aPE~~ 1106 (1237)
+.|+++|+.|||.+ +|.|||+|++|||+. +| ..+.|+|||++--.+...-. ...-...|...-||||+.
T Consensus 347 laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence 99999999999999 999999999999994 33 35789999998533321111 111234577789999998
Q ss_pred Ccccc------CcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHH
Q 000889 1107 QSFRC------TTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYL 1180 (1237)
Q Consensus 1107 ~~~~~------~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~ 1180 (1237)
....- -.|+|.|+.|.+.||++....||...-. ..-+... .++.. -|.+ +...+ ..+.
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe-m~L~~r~-----Yqe~q-----LPal--p~~vp---p~~r 487 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE-MLLDTRT-----YQESQ-----LPAL--PSRVP---PVAR 487 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch-heechhh-----hhhhh-----CCCC--cccCC---hHHH
Confidence 64321 2479999999999999999999974210 0001111 11111 1112 11222 2345
Q ss_pred HHHHhccccCCCCCCCHHHHHHHHH
Q 000889 1181 RISFECLDDRPFKRPTMIQVMAMFK 1205 (1237)
Q Consensus 1181 ~li~~cl~~dP~~RPt~~ell~~L~ 1205 (1237)
+++...++.+|.+|++..-....+.
T Consensus 488 qlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 488 QLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHHhcCCccccCCccHHHhHHH
Confidence 6777899999999999877666653
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=1e-19 Score=173.36 Aligned_cols=188 Identities=27% Similarity=0.424 Sum_probs=152.1
Q ss_pred CCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecccCceeeecccccccccccccEecccCCccccCCCccccCCc
Q 000889 443 LTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLP 522 (1237)
Q Consensus 443 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 522 (1237)
+.++...+.|.||+|+++ .+|..+ ..+.+|+.|++.+|+|. ..|..++.+++|+.|+++-|++. ..|..|+.+|
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppni---a~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p 102 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNI---AELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFP 102 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcH---HHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCc
Confidence 445667777777777777 444444 45677777788888877 67778889999999999999998 8899999999
Q ss_pred CcceeecccccccCcccccccccCCCccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEe
Q 000889 523 NLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQL 602 (1237)
Q Consensus 523 ~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 602 (1237)
.|+.|||.+|++....-++-|..++.|+.|+|++|.+. .+|..++.+++|+.|.+..|.+- .+|..++.|++|+.|++
T Consensus 103 ~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhi 180 (264)
T KOG0617|consen 103 ALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHI 180 (264)
T ss_pred hhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhc
Confidence 99999999999875433344456788999999999998 89999999999999999999998 79999999999999999
Q ss_pred cCCccccCCCCCCCCCCC---CCEEECCCCccccCCChhH
Q 000889 603 GNNSLTGQVPQGLGKCRS---LVWLDLNSNNLSGPLPSEL 639 (1237)
Q Consensus 603 ~~N~l~~~~p~~l~~l~~---L~~L~L~~N~l~g~ip~~~ 639 (1237)
.+|+++ .+|++++++.- =+.+.+.+|++...|.+.+
T Consensus 181 qgnrl~-vlppel~~l~l~~~k~v~r~E~NPwv~pIaeQf 219 (264)
T KOG0617|consen 181 QGNRLT-VLPPELANLDLVGNKQVMRMEENPWVNPIAEQF 219 (264)
T ss_pred ccceee-ecChhhhhhhhhhhHHHHhhhhCCCCChHHHHH
Confidence 999999 78888887653 3567788888876665544
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=4.3e-17 Score=200.71 Aligned_cols=197 Identities=22% Similarity=0.265 Sum_probs=164.3
Q ss_pred HHhCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcC---CCCcccccceEEeCCeEEE
Q 000889 925 EATNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIK---HRNLVPLLGYCKIGEERLL 1001 (1237)
Q Consensus 925 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~l 1001 (1237)
.....|.+.+.||+|+||.||+|...+|+.||+|+-+.... .+|.-=.+++.|++ -+.|..+..++...+.-++
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 34557888999999999999999998999999998764332 23333334444444 3456777777777888899
Q ss_pred EEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeC-------CCCceEEe
Q 000889 1002 VYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLD-------ENFEARVS 1074 (1237)
Q Consensus 1002 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~-------~~~~vkl~ 1074 (1237)
|+||.+.|+|.+++.. .+.++|..+..++.|++..++.||.. +|||+||||+|.++. ....++|+
T Consensus 772 v~ey~~~Gtlld~~N~-----~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINT-----NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred eeeccccccHHHhhcc-----CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEE
Confidence 9999999999999983 35789999999999999999999999 999999999999995 23469999
Q ss_pred ecccceeeccCCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCC
Q 000889 1075 DFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKR 1132 (1237)
Q Consensus 1075 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~ 1132 (1237)
|||.+-.+.-.....+....++|-.+-.+|+..|..|++.+|-|.++.+++-|+.|+.
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 9999987766555566778899999999999999999999999999999999999864
No 440
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=8.7e-19 Score=201.04 Aligned_cols=186 Identities=25% Similarity=0.332 Sum_probs=153.6
Q ss_pred eecccCCeEEEEEE----ECCCCEEEEEEeccccCc--CHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEEEecc
Q 000889 935 MIGSGGFGEVYKAQ----LRDGSVVAIKKLIHVTGQ--GDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVYEYMK 1007 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~----~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 1007 (1237)
++|+|+||.|++++ ...+..+|.|...+.... .......|..++...+ ||.+|++...++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 36999999999864 223666777766533221 1124556888888887 9999999999999999999999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT 1087 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~ 1087 (1237)
||++...+... ..+.+.....+...++-+++++|+. +|+|||+|++||+++.+|++|+.|||+++..-...
T Consensus 81 gg~lft~l~~~-----~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKE-----VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK- 151 (612)
T ss_pred cchhhhccccC-----CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhh-
Confidence 99998877653 4567777788888999999999999 99999999999999999999999999998654322
Q ss_pred ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCC
Q 000889 1088 HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDP 1136 (1237)
Q Consensus 1088 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~ 1136 (1237)
..|||..|||||++. .+..++|.||||++++||++|..||..
T Consensus 152 -----~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 152 -----IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred -----hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 228999999999998 577889999999999999999999974
No 441
>PRK10345 hypothetical protein; Provisional
Probab=99.71 E-value=7.2e-17 Score=170.63 Aligned_cols=136 Identities=16% Similarity=0.194 Sum_probs=105.9
Q ss_pred CCCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhc-----CCCCcccccceEEeCC---e-EEE
Q 000889 931 SADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKI-----KHRNLVPLLGYCKIGE---E-RLL 1001 (1237)
Q Consensus 931 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~~l 1001 (1237)
.-.+.||+|+||.||. +.+....+||++........+.+.+|+++++++ .||||++++|++.++. . ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3456899999999995 444444578888654444567799999999999 5799999999998864 3 347
Q ss_pred EEEe--ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCCeeeCC----CCceEEe
Q 000889 1002 VYEY--MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGL-AFLHHSCIPHIIHRDMKSSNVLLDE----NFEARVS 1074 (1237)
Q Consensus 1002 v~e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~ivHrDikp~NIll~~----~~~vkl~ 1074 (1237)
|+|| +++|+|.+++... .+++. ..++.+++.++ +|||++ +||||||||+||+++. ++.++|+
T Consensus 83 I~e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EecCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEE
Confidence 8999 5679999999652 24444 35577777777 999999 9999999999999974 3479999
Q ss_pred ecccc
Q 000889 1075 DFGMA 1079 (1237)
Q Consensus 1075 DfGla 1079 (1237)
||+.+
T Consensus 152 Dg~G~ 156 (210)
T PRK10345 152 DNIGE 156 (210)
T ss_pred ECCCC
Confidence 95544
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=1e-18 Score=201.82 Aligned_cols=208 Identities=27% Similarity=0.362 Sum_probs=98.9
Q ss_pred eeccCccccCcccchhccccccceEEeccCCCCCCC----CCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccce
Q 000889 403 LNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGP----VPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEK 478 (1237)
Q Consensus 403 L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~ 478 (1237)
|+|..+.+++......+..+..|++|+++++.++.. ++..+...++|+.|+++++.+.+ .+..+
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~----------- 70 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGL----------- 70 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHH-----------
Confidence 445555554444444444555555555555555321 33345555667777777665542 11111
Q ss_pred ecccCceeeecccccccccccccEecccCCccccCCCccccCCcC---cceeecccccccCc----ccccccccC-CCcc
Q 000889 479 IVLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWSLPN---LSDLVMWANNLTGE----IPEGICVNG-GNLE 550 (1237)
Q Consensus 479 L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~----ip~~~~~~l-~~L~ 550 (1237)
..++..+..+++|+.|++++|.+.+..+..+..+.+ |++|++++|++++. +...+ ..+ ++|+
T Consensus 71 ---------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l-~~~~~~L~ 140 (319)
T cd00116 71 ---------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGL-KDLPPALE 140 (319)
T ss_pred ---------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHH-HhCCCCce
Confidence 123344555666677777766666444444443333 55555555554421 11111 122 4555
Q ss_pred EEEccccccccc----cccccccCCCccEEEeeccccccc----CCccccCccccceEEecCCccccC----CCCCCCCC
Q 000889 551 TLILNNNHLTGA----IPKSIASCTNMLWVSLSSNQLTGE----IPAGIGNLVKLAILQLGNNSLTGQ----VPQGLGKC 618 (1237)
Q Consensus 551 ~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~L~~L~~L~L~~N~l~~~----~p~~l~~l 618 (1237)
.|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+
T Consensus 141 ~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~ 220 (319)
T cd00116 141 KLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL 220 (319)
T ss_pred EEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc
Confidence 555555555421 223344445555555555555521 222233334555555555555422 22334445
Q ss_pred CCCCEEECCCCccc
Q 000889 619 RSLVWLDLNSNNLS 632 (1237)
Q Consensus 619 ~~L~~L~L~~N~l~ 632 (1237)
++|+.|++++|+++
T Consensus 221 ~~L~~L~ls~n~l~ 234 (319)
T cd00116 221 KSLEVLNLGDNNLT 234 (319)
T ss_pred CCCCEEecCCCcCc
Confidence 55555555555554
No 443
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.71 E-value=4.3e-18 Score=203.68 Aligned_cols=245 Identities=23% Similarity=0.286 Sum_probs=174.9
Q ss_pred CCCCCceecccCCeEEEEEEECCCCEEEEEEecccc-CcCHHHHHH---HHHHHHhcCCCCcccccceEEeCCeEEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVT-GQGDREFMA---EMETIGKIKHRNLVPLLGYCKIGEERLLVYE 1004 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 1004 (1237)
.|..++.+|.+.|=.|.+|++++|. |+||++.+.. .-..+.|.+ |++ ...++|||++++..+.......|||=+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4666788999999999999998776 8889887544 233444444 444 555689999999888666666678878
Q ss_pred eccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec-
Q 000889 1005 YMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN- 1083 (1237)
Q Consensus 1005 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~- 1083 (1237)
|+. -+|+|.+..+ .-+...+.+.|+.|++.|+.-+|.. +|+|||||.+|||++.=.-+.|+||..-+..-
T Consensus 102 yvk-hnLyDRlSTR-----PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYL 172 (1431)
T KOG1240|consen 102 YVK-HNLYDRLSTR-----PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYL 172 (1431)
T ss_pred HHh-hhhhhhhccc-----hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccC
Confidence 875 5888877654 3467778888999999999999999 99999999999999988889999997654221
Q ss_pred cCCcc----eeeeccccCCCcCCccccCcc----------c-cCcccchHHHHHHHHHHHc-CCCCCCCCCCCCCchHHH
Q 000889 1084 ALDTH----LSVSTLAGTPGYVPPEYYQSF----------R-CTTKGDVYSYGVILLELLS-GKRPIDPSEFGDDNNLVG 1147 (1237)
Q Consensus 1084 ~~~~~----~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDvwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~ 1147 (1237)
+.+.. .-..+...-..|.|||.+... . .+++-||||+||+++|+++ |++||.-+. +..
T Consensus 173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ------L~a 246 (1431)
T KOG1240|consen 173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ------LLA 246 (1431)
T ss_pred CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH------HHh
Confidence 11111 112233334479999987431 1 4567899999999999998 788886321 111
Q ss_pred HHHH--HhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1148 WAKQ--LHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1148 ~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
|... ...+..++++-|. .+..++..|++.||.+|.++.+.++.
T Consensus 247 Yr~~~~~~~e~~Le~Ied~-------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 247 YRSGNADDPEQLLEKIEDV-------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HhccCccCHHHHHHhCcCc-------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 1100 0011112222221 45678889999999999999999987
No 444
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.68 E-value=1.7e-17 Score=191.56 Aligned_cols=138 Identities=25% Similarity=0.308 Sum_probs=64.7
Q ss_pred CCCCCceeeccCccccCccc---chhhcccccceEEEecCCccCCCCchh---hhccCCCCcEEecCCCcCCCCCchhHh
Q 000889 297 RCGNLSVITLSQNGLSGTEF---PASLKNCQLLETLNMSHNALQGGIPGF---LLGSFRNLKQLSLAHNQFAGEIPPELG 370 (1237)
Q Consensus 297 ~l~~L~~L~L~~n~l~~~~~---~~~l~~l~~L~~L~Ls~N~l~~~~~~~---~~~~l~~L~~L~L~~n~l~~~ip~~~~ 370 (1237)
.+++|++|++++|.+++..+ +..+..+++|++|+|++|.+++..... .+..+++|++|++++|.+++.....+.
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~ 242 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALA 242 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHH
Confidence 34445555555554443221 122333345555555555554322111 123445566666666655543333333
Q ss_pred hhc----CCCcEEEcccCcCCCC----CCcCcccccccceeeccCccccCcccc---hhcccc-ccceEEeccCCC
Q 000889 371 QAC----GTLRELDLSSNRLTGE----LPSTFASCSSLHSLNLGSNMLSGNFLN---TVVSKI-SSLIYLYVPFNN 434 (1237)
Q Consensus 371 ~~l----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~~l-~~L~~L~L~~N~ 434 (1237)
..+ +.|++|++++|.+++. +...+..+++|+.+++++|.++..... ...... +.|++|++.+|.
T Consensus 243 ~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 243 SALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 322 4566666666665421 223344445666666666666533111 122223 566666666654
No 445
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.66 E-value=3.4e-17 Score=196.38 Aligned_cols=215 Identities=21% Similarity=0.320 Sum_probs=142.8
Q ss_pred CCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.+|..++.|..|+||.||.++++. .+++|. ++.+.. .+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~-----lilRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN-----LILRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhh-cccccc-----hhhhc--cccccCCccee-------------------
Confidence 468889999999999999999874 556777 443211 11111 33333444444
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc--
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA-- 1084 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~-- 1084 (1237)
|+=...+... .+++... +.+++|+|+. +|||||+||+|.+|+.-|++|+.|||+++..-.
T Consensus 136 --gDc~tllk~~-----g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 --GDCATLLKNI-----GPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred --chhhhhcccC-----CCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 3333333221 2333322 6789999999 999999999999999999999999999874211
Q ss_pred -----------CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHh
Q 000889 1085 -----------LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLH 1153 (1237)
Q Consensus 1085 -----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1153 (1237)
..........+||+.|.|||++..+.|...+|+|++|+|+||.+.|..||.+...++ + .....
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee---l---fg~vi 271 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---L---FGQVI 271 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH---H---Hhhhh
Confidence 001112345789999999999999999999999999999999999999998653221 1 11111
Q ss_pred hhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 000889 1154 REKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMA 1202 (1237)
Q Consensus 1154 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~ 1202 (1237)
.+ .......+.+...+..+++.+.++..|.+|--....++
T Consensus 272 sd---------~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~e 311 (1205)
T KOG0606|consen 272 SD---------DIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALE 311 (1205)
T ss_pred hh---------hccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhh
Confidence 11 11111112222335567777899999999974444443
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.65 E-value=6.9e-16 Score=167.62 Aligned_cols=142 Identities=14% Similarity=0.127 Sum_probs=110.0
Q ss_pred CCCCCceecccCCeEEEEEE--ECCCCEEEEEEeccccCc-------------------C-----HHHHHHHHHHHHhcC
Q 000889 929 GFSADSMIGSGGFGEVYKAQ--LRDGSVVAIKKLIHVTGQ-------------------G-----DREFMAEMETIGKIK 982 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~~~~~~~~-------------------~-----~~~~~~E~~~l~~l~ 982 (1237)
-|++.+.||+|+||.||+|+ ..+|+.||+|++...... . ...+..|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48889999999999999998 457999999988643210 0 122567999999997
Q ss_pred CC--CcccccceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC-eeecCCC
Q 000889 983 HR--NLVPLLGYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPH-IIHRDMK 1059 (1237)
Q Consensus 983 h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivHrDik 1059 (1237)
+. .+++++++ ...++||||++|+++....... .......+..++.|++.+++|||+. + |+|||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dik 176 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLS 176 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCC
Confidence 53 33444432 2358999999998886654221 2345556788999999999999999 9 9999999
Q ss_pred CCCeeeCCCCceEEeecccceeec
Q 000889 1060 SSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1060 p~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
|+||+++ ++.++++|||.|....
T Consensus 177 p~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 177 EYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhhEEEE-CCCEEEEEChhhhccC
Confidence 9999999 8899999999987543
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.63 E-value=2.6e-15 Score=162.01 Aligned_cols=134 Identities=22% Similarity=0.293 Sum_probs=112.9
Q ss_pred ceecccCCeEEEEEEECCCCEEEEEEeccccCcC--------HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 934 SMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQG--------DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
+.||+|++|.||+|.+ .+..+++|+........ ...+.+|++++..+.|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999988 57788999765322111 13467899999999999998888887778888999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
++|++|.+++... .+ .+..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.++.
T Consensus 81 ~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988642 11 7788999999999999999 999999999999999 78999999999864
No 448
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.62 E-value=2.2e-15 Score=161.00 Aligned_cols=131 Identities=18% Similarity=0.309 Sum_probs=107.0
Q ss_pred eecccCCeEEEEEEECCCCEEEEEEeccccCcC--------HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEec
Q 000889 935 MIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQG--------DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYM 1006 (1237)
Q Consensus 935 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 1006 (1237)
.||+|+||.||+|.+ ++..|++|+........ ...+.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999996 47789999865322111 244678999999999887766666666677789999999
Q ss_pred cCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1007 KWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1007 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
+|++|.+++.... . .++.+++++++++|+. +++|||++|.||+++ ++.++++|||+++..
T Consensus 80 ~g~~l~~~~~~~~-----~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN-----D-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH-----H-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999998875421 1 7889999999999999 999999999999999 789999999998753
No 449
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.62 E-value=1.1e-16 Score=180.35 Aligned_cols=124 Identities=26% Similarity=0.392 Sum_probs=109.2
Q ss_pred eEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecc
Q 000889 998 ERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFG 1077 (1237)
Q Consensus 998 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfG 1077 (1237)
..|+.|++|.-.+|.+++..+.. +...++.....++.|++.|++| + +.+|||+||.||+...+.++||.|||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhh
Confidence 57899999999999999976543 3567888899999999999999 6 89999999999999999999999999
Q ss_pred cceeeccCC----cceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHc
Q 000889 1078 MARLVNALD----THLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLS 1129 (1237)
Q Consensus 1078 la~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t 1129 (1237)
+........ .....+...||..||+||.+.+..|+.++||||+|++++|++.
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 987665544 2334567789999999999999999999999999999999997
No 450
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.62 E-value=2.5e-15 Score=160.14 Aligned_cols=143 Identities=18% Similarity=0.137 Sum_probs=110.9
Q ss_pred HHHhCCCCCCceecccCCeEEEEEEECCCCEEEEEEeccccCc----------------------CHHHHHHHHHHHHhc
Q 000889 924 LEATNGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQ----------------------GDREFMAEMETIGKI 981 (1237)
Q Consensus 924 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l 981 (1237)
......|.+.+.||+|+||.||+|..++|+.||||++...... ....+..|+.++..+
T Consensus 11 ~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 90 (198)
T cd05144 11 VKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL 90 (198)
T ss_pred HHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH
Confidence 3334448888999999999999999888999999986532100 011356789999999
Q ss_pred CCCC--cccccceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 000889 982 KHRN--LVPLLGYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMK 1059 (1237)
Q Consensus 982 ~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDik 1059 (1237)
.|++ +++.++ ....++||||++|++|.+.... .....++.++++++.++|+. +|+|||||
T Consensus 91 ~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~ 152 (198)
T cd05144 91 YEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYKH---GIIHGDLS 152 (198)
T ss_pred HHcCCCCCceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCC
Confidence 8874 444443 2456899999999998765321 23457889999999999998 99999999
Q ss_pred CCCeeeCCCCceEEeecccceeecc
Q 000889 1060 SSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1060 p~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
|+||++++++.++|+|||.+.....
T Consensus 153 p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred cccEEEcCCCcEEEEECCccccCCC
Confidence 9999999999999999999975543
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.61 E-value=3.3e-15 Score=183.53 Aligned_cols=137 Identities=21% Similarity=0.300 Sum_probs=111.0
Q ss_pred CCCCCCceecccCCeEEEEEEECCCCEEEEEEecccc-Cc-------CHHHHHHHHHHHHhcCCCCcccccceEEeCCeE
Q 000889 928 NGFSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVT-GQ-------GDREFMAEMETIGKIKHRNLVPLLGYCKIGEER 999 (1237)
Q Consensus 928 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 999 (1237)
..|...+.||+|+||+||+|.+.... +++|+..... .. ..+.+.+|++++++++|++++....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34566789999999999999886443 4444332111 11 124578899999999999999888888777788
Q ss_pred EEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccc
Q 000889 1000 LLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1079 (1237)
Q Consensus 1000 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla 1079 (1237)
++||||++|++|.+++. ....++.++++++.|||+. +++||||||+||++ .++.++|+|||++
T Consensus 412 ~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred EEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 99999999999999875 2356899999999999999 99999999999999 5779999999999
Q ss_pred eee
Q 000889 1080 RLV 1082 (1237)
Q Consensus 1080 ~~~ 1082 (1237)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 753
No 452
>PLN03150 hypothetical protein; Provisional
Probab=99.58 E-value=3.1e-15 Score=185.26 Aligned_cols=117 Identities=40% Similarity=0.700 Sum_probs=106.1
Q ss_pred ceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCCCcccCcccccceecc
Q 000889 712 SLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIPGSLGGLSFLSDLDVS 791 (1237)
Q Consensus 712 ~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~ 791 (1237)
.++.|+|++|.++|.+|..++.|++|+.|+|++|+|+|.+|..++.+++|+.|||++|+|+|.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCC--CCCCccCCCcccCCCCCCCCCC-CCCC
Q 000889 792 NNNLSGIIPSG--GQLTTFPASRYENNSGLCGLPL-LPCS 828 (1237)
Q Consensus 792 ~N~l~g~~p~~--~~~~~~~~~~~~~n~~~~~~p~-~~c~ 828 (1237)
+|+|+|.+|.. ..+.......+.+|+++|+.|. .+|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 99999999964 1223345667899999999875 5774
No 453
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=4.7e-16 Score=174.62 Aligned_cols=177 Identities=29% Similarity=0.428 Sum_probs=140.5
Q ss_pred CCccEEEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEEEC
Q 000889 547 GNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLDL 626 (1237)
Q Consensus 547 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 626 (1237)
..-...||+.|++. .+|..+..+..|+.+.|.+|.+. .+|..+++|..|++|||+.|+++ .+|..++.|+ |+.|-+
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~ 150 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIV 150 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEE
Confidence 34456778888887 78888888888888888888888 78888888888888888888888 7888888876 888888
Q ss_pred CCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCcceeccceeee
Q 000889 627 NSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGMTMYT 706 (1237)
Q Consensus 627 ~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (1237)
++|+++ .+|.+++-+
T Consensus 151 sNNkl~-~lp~~ig~~---------------------------------------------------------------- 165 (722)
T KOG0532|consen 151 SNNKLT-SLPEEIGLL---------------------------------------------------------------- 165 (722)
T ss_pred ecCccc-cCCcccccc----------------------------------------------------------------
Confidence 888887 677766521
Q ss_pred eccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCCCcccCccccc
Q 000889 707 FTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIPGSLGGLSFLS 786 (1237)
Q Consensus 707 f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 786 (1237)
..|..||.|.|.+. .+|..+++|.+|+.|+++.|++. .+|.+++.| .|..||+|.|+++ .||-.|..|+.|+
T Consensus 166 ----~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq 237 (722)
T KOG0532|consen 166 ----PTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQ 237 (722)
T ss_pred ----hhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhhe
Confidence 14667788888887 77888888888888888888888 677777755 4778888888887 8888888888888
Q ss_pred ceecccccccccCC
Q 000889 787 DLDVSNNNLSGIIP 800 (1237)
Q Consensus 787 ~l~l~~N~l~g~~p 800 (1237)
+|-|.+|+|...+-
T Consensus 238 ~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 238 VLQLENNPLQSPPA 251 (722)
T ss_pred eeeeccCCCCCChH
Confidence 88888888876444
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.50 E-value=9.7e-14 Score=146.65 Aligned_cols=136 Identities=19% Similarity=0.252 Sum_probs=97.9
Q ss_pred CceecccCCeEEEEEEECCCCEEEEEEeccccCc--CHHHH----------------------HHHHHHHHhcCCCC--c
Q 000889 933 DSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQ--GDREF----------------------MAEMETIGKIKHRN--L 986 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~E~~~l~~l~h~n--i 986 (1237)
.+.||+|+||+||+|.+.+++.||||++...... ....+ ..|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999987643211 11111 34566666664432 4
Q ss_pred ccccceEEeCCeEEEEEEeccCCCHHH-HHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCee
Q 000889 987 VPLLGYCKIGEERLLVYEYMKWGSLES-VLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHH-SCIPHIIHRDMKSSNVL 1064 (1237)
Q Consensus 987 v~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrDikp~NIl 1064 (1237)
.+.+++ ...++||||++++.+.. .+.... .. ..+..++.+++.++.++|. . +|+||||||+||+
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~------~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nil 147 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR------LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNIL 147 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh------hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEE
Confidence 444433 34689999999854321 111110 01 5567899999999999999 7 9999999999999
Q ss_pred eCCCCceEEeecccceeec
Q 000889 1065 LDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1065 l~~~~~vkl~DfGla~~~~ 1083 (1237)
++ ++.++++|||.+....
T Consensus 148 i~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 148 VD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred EE-CCcEEEEECccccccc
Confidence 99 8899999999997554
No 455
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.49 E-value=1.5e-13 Score=139.64 Aligned_cols=135 Identities=19% Similarity=0.182 Sum_probs=112.7
Q ss_pred CCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCC--CCcccccceEEeCCeEEEEEEeccCC
Q 000889 932 ADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKH--RNLVPLLGYCKIGEERLLVYEYMKWG 1009 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 1009 (1237)
+.+.||+|.++.||+++..+ ..+++|....... ...+.+|+.+++.++| +++++++++....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35679999999999999864 7889998754322 4578899999999976 58999998888778899999999987
Q ss_pred CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1010 SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1010 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.++.
T Consensus 79 ~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 76543 4455677889999999999987444799999999999999989999999999864
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=5.3e-15 Score=180.15 Aligned_cols=256 Identities=24% Similarity=0.305 Sum_probs=185.8
Q ss_pred CCCCCceecccCCeEEEEEEECC--CCEEEEEEecccc--CcCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEEEEE
Q 000889 929 GFSADSMIGSGGFGEVYKAQLRD--GSVVAIKKLIHVT--GQGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 929 ~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
.|...+.||+|+|+.|-.+.... ...+|+|.+.... .........|..+-+.+. |+|++.+++...+.+..++++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 46666779999999998887642 4456666554332 112233445777777776 999999999999999999999
Q ss_pred EeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHH-hcCCCCeeecCCCCCCeeeCCCC-ceEEeeccccee
Q 000889 1004 EYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLH-HSCIPHIIHRDMKSSNVLLDENF-EARVSDFGMARL 1081 (1237)
Q Consensus 1004 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivHrDikp~NIll~~~~-~vkl~DfGla~~ 1081 (1237)
+|.+|+++.+.+... .....+...+..++.|+..++.|+| .. +++||||||+|.+++..+ ..|++|||+|..
T Consensus 101 ~~s~g~~~f~~i~~~---~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHP---DSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred CcccccccccccccC---CccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 999999998877311 1124555667788999999999999 77 999999999999999999 999999999988
Q ss_pred ecc-CCcceeeecccc-CCCcCCccccCcc-ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhccc
Q 000889 1082 VNA-LDTHLSVSTLAG-TPGYVPPEYYQSF-RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRI 1158 (1237)
Q Consensus 1082 ~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1237)
+.. ..........+| ++.|+|||...+. ......|+||.|+++.-+++|..|++...... ..+..|...... .
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~---~ 250 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-GRYSSWKSNKGR---F 250 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-ccceeecccccc---c
Confidence 776 455555567788 9999999999884 45678999999999999999999987544322 222222221100 0
Q ss_pred ccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1159 NEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1159 ~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
... .+ ..-.....++..+++..+|..|.+..++...
T Consensus 251 ----~~~---~~--~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 251 ----TQL---PW--NSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ----ccC---cc--ccCChhhhhcccccccCCchhcccccccccc
Confidence 000 00 0011133455567888999999998877643
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.47 E-value=3.6e-15 Score=167.56 Aligned_cols=189 Identities=34% Similarity=0.501 Sum_probs=108.4
Q ss_pred EecccCCccccCCCccccCCcCcceeecccccccCcccccccccCCCccEEEccccccccccccccccCCCccEEEeecc
Q 000889 502 TIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSN 581 (1237)
Q Consensus 502 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 581 (1237)
..||+.|++. .+|..+..+-.|+.+.|++|-+. .||..++ ++..|++|||+.|+++ .+|..++.|+ |+.|-+++|
T Consensus 79 ~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~-~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 79 FADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAIC-NLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhh-hhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 3444444444 44444444444444444444444 3333331 2334444444444444 4444444443 556666666
Q ss_pred cccccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEEECCCCccccCCChhHHhhcccccCccccCccceeecc
Q 000889 582 QLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLDLNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRN 661 (1237)
Q Consensus 582 ~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1237)
+++ .+|..++.+..|..||.+.|.+. .+|..++.+.+|+.|.+..|++. .+|++++.+
T Consensus 154 kl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L------------------- 211 (722)
T KOG0532|consen 154 KLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL------------------- 211 (722)
T ss_pred ccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-------------------
Confidence 666 56666666666666666666666 56666666666766666666665 555555422
Q ss_pred CCCccccCCCCcccccCCCccccCCCccccCCCCcceeccceeeeeccCCceeEEEccCCcCCccCCccccCCCCCcEEE
Q 000889 662 EGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGMTMYTFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLN 741 (1237)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~ 741 (1237)
.|..||+|.|+++ .||-+|.+|+.|++|-
T Consensus 212 --------------------------------------------------pLi~lDfScNkis-~iPv~fr~m~~Lq~l~ 240 (722)
T KOG0532|consen 212 --------------------------------------------------PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQ 240 (722)
T ss_pred --------------------------------------------------ceeeeecccCcee-ecchhhhhhhhheeee
Confidence 3667777777776 6777777777777777
Q ss_pred ecCcccccccccccccccCC---cEEeCCCC
Q 000889 742 LGHNKLTGHIPDSFGGLKAI---GVLDLSHN 769 (1237)
Q Consensus 742 Ls~N~l~~~~P~~~~~L~~L---~~L~Ls~N 769 (1237)
|.+|.|+ ..|..+....++ ++|+..-+
T Consensus 241 LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 241 LENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred eccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 7777777 666666544433 33444444
No 458
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.46 E-value=4.7e-13 Score=145.86 Aligned_cols=134 Identities=18% Similarity=0.237 Sum_probs=103.6
Q ss_pred ceec-ccCCeEEEEEEECCCCEEEEEEecccc-------------CcCHHHHHHHHHHHHhcCCCCc--ccccceEEeCC
Q 000889 934 SMIG-SGGFGEVYKAQLRDGSVVAIKKLIHVT-------------GQGDREFMAEMETIGKIKHRNL--VPLLGYCKIGE 997 (1237)
Q Consensus 934 ~~lG-~G~fg~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~ 997 (1237)
..|| .|+.|+||++... +..+++|.+.... ......+.+|++++.++.|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4687 8999999999886 7788888774210 1223457889999999998774 67777644322
Q ss_pred ----eEEEEEEeccC-CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceE
Q 000889 998 ----ERLLVYEYMKW-GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEAR 1072 (1237)
Q Consensus 998 ----~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vk 1072 (1237)
..++||||++| .+|.+++... .++.. .+.++++++.+||+. ||+||||||.|||++.++.++
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 23599999997 6898887542 34433 356889999999999 999999999999999988999
Q ss_pred Eeeccccee
Q 000889 1073 VSDFGMARL 1081 (1237)
Q Consensus 1073 l~DfGla~~ 1081 (1237)
|+|||.++.
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999999864
No 459
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.40 E-value=6.5e-14 Score=149.72 Aligned_cols=211 Identities=19% Similarity=0.197 Sum_probs=137.4
Q ss_pred ceeEEecCCCCCCCc---cccccccCCCCCCeEEccCCCCC---ccc------chhhhhcCcccceecccCCcc--cCCc
Q 000889 102 HVTSLNLNNSGLSGS---LNLTTLTALPYLEHLNLQGNSFS---AGD------LSTSKTSSCSLVTMDLSSNNI--TGSL 167 (1237)
Q Consensus 102 ~v~~L~L~~~~l~~~---~~~~~l~~l~~L~~L~Ls~n~l~---~~~------~~~~~~~~~~L~~L~Ls~n~l--~g~~ 167 (1237)
.++.|+|++|.++-. ..+..+.+.+.|+.-++|+---+ +.- +...+..+++|++||||+|.+ .|..
T Consensus 31 s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~ 110 (382)
T KOG1909|consen 31 SLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIR 110 (382)
T ss_pred ceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchH
Confidence 578888888877532 23456677777888777764221 111 122244445788888888877 5666
Q ss_pred ccccccccCCccceEEccCCccCCCc----------------cccCCcccEEEcCCCCCCCchh--hhccccCCCCCCEE
Q 000889 168 PGRSFLLSCDRLSYVNLSHNSISGGS----------------LHIGPSLLQLDLSGNQISDSAL--LTYSLSNCQNLNLL 229 (1237)
Q Consensus 168 ~~~~~l~~~~~L~~L~ls~n~l~~~~----------------~~~~~~L~~L~Ls~N~i~~~~~--~~~~l~~l~~L~~L 229 (1237)
+....+.+|..|++|+|.+|.+.... ....+.|++++.++|.+.+.+. .+..|..++.|+.+
T Consensus 111 ~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leev 190 (382)
T KOG1909|consen 111 GLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEV 190 (382)
T ss_pred HHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceE
Confidence 67777778888888888888776411 3345689999999999888774 34557778899999
Q ss_pred EccCCCCCc----hhhhhcccCCCccEEEcccccccCcc--chhhhhccCCCccEEeCCCCcCCCCccccc----ccCCC
Q 000889 230 NFSDNKLPG----KLNATSVNCKSISTIDLSYNLLSGEI--PASFVADSSGSLKYLDLSHNNFTGKFSNLD----FGRCG 299 (1237)
Q Consensus 230 ~Ls~n~l~~----~~~~~~~~~~~L~~LdLs~N~l~~~~--~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~----~~~l~ 299 (1237)
.++.|.|.. .+...+..|++|+.|||.+|.++... ..+-.....++|++|++++|.+........ -...+
T Consensus 191 r~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p 270 (382)
T KOG1909|consen 191 RLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAP 270 (382)
T ss_pred EEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCC
Confidence 999998842 25667788999999999999987322 222223344567777777777764332211 11244
Q ss_pred CCceeeccCcccc
Q 000889 300 NLSVITLSQNGLS 312 (1237)
Q Consensus 300 ~L~~L~L~~n~l~ 312 (1237)
+|++|.|.+|.|+
T Consensus 271 ~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 271 SLEVLELAGNEIT 283 (382)
T ss_pred CCceeccCcchhH
Confidence 5555555555543
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.35 E-value=1e-12 Score=156.34 Aligned_cols=180 Identities=39% Similarity=0.548 Sum_probs=134.1
Q ss_pred CCccEEEccccccccccccccccCC-CccEEEeecccccccCCccccCccccceEEecCCccccCCCCCCCCCCCCCEEE
Q 000889 547 GNLETLILNNNHLTGAIPKSIASCT-NMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLD 625 (1237)
Q Consensus 547 ~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 625 (1237)
+.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|...+.+++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 45677777777777 5666666664 7888888888887 67777788888888888888887 6666666778888888
Q ss_pred CCCCccccCCChhHHhhcccccCccccCccceeeccCCCccccCCCCcccccCCCccccCCCccccCCCCcceeccceee
Q 000889 626 LNSNNLSGPLPSELANQAGVVMPGIVSGKQFAFVRNEGGTACRGAGGLVEFEGIRPERLEGFPMVHSCPSTRIYTGMTMY 705 (1237)
Q Consensus 626 L~~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1237)
+++|+++ .+|..+...
T Consensus 193 ls~N~i~-~l~~~~~~~--------------------------------------------------------------- 208 (394)
T COG4886 193 LSGNKIS-DLPPEIELL--------------------------------------------------------------- 208 (394)
T ss_pred ccCCccc-cCchhhhhh---------------------------------------------------------------
Confidence 8888887 566543211
Q ss_pred eeccCCceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCCCcccCcccc
Q 000889 706 TFTTNGSLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIPGSLGGLSFL 785 (1237)
Q Consensus 706 ~f~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L 785 (1237)
..|++|++++|.+. .++..+..+.++..|.+++|++. .+|..++.+.+++.|++++|+++ .++. ++.+.+|
T Consensus 209 -----~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l 279 (394)
T COG4886 209 -----SALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNL 279 (394)
T ss_pred -----hhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccc-cccc-ccccCcc
Confidence 13677788888543 46777888888888888888887 55778888888888888888887 5555 7888888
Q ss_pred cceecccccccccCCCC
Q 000889 786 SDLDVSNNNLSGIIPSG 802 (1237)
Q Consensus 786 ~~l~l~~N~l~g~~p~~ 802 (1237)
+.|++++|.++..+|..
T Consensus 280 ~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 280 RELDLSGNSLSNALPLI 296 (394)
T ss_pred CEEeccCccccccchhh
Confidence 88888888888877754
No 461
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.34 E-value=1.3e-13 Score=147.58 Aligned_cols=263 Identities=24% Similarity=0.312 Sum_probs=152.4
Q ss_pred cccccCCCCCCeEEccCCCCCcccchhh---hhcCcccceecccCC---cccCCcccccccccCCccceEEccCCccCCC
Q 000889 119 LTTLTALPYLEHLNLQGNSFSAGDLSTS---KTSSCSLVTMDLSSN---NITGSLPGRSFLLSCDRLSYVNLSHNSISGG 192 (1237)
Q Consensus 119 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~~---~~~~~~L~~L~Ls~n---~l~g~~~~~~~l~~~~~L~~L~ls~n~l~~~ 192 (1237)
...+.....+++|+||||.|+......+ +.+.++|+..++|+= .....+|. .|..| ..
T Consensus 23 ~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e--------~L~~l--------~~ 86 (382)
T KOG1909|consen 23 EEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPE--------ALKML--------SK 86 (382)
T ss_pred HHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHH--------HHHHH--------HH
Confidence 3456678889999999999976654333 555556666666652 11222221 11110 11
Q ss_pred ccccCCcccEEEcCCCCCCCchhhh--ccccCCCCCCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchhhhh
Q 000889 193 SLHIGPSLLQLDLSGNQISDSALLT--YSLSNCQNLNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPASFVA 270 (1237)
Q Consensus 193 ~~~~~~~L~~L~Ls~N~i~~~~~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~ 270 (1237)
.+..++.|++||||+|-++..++.. .-++.|..|++|.|++|.+.-.....++. .|..| ..|...
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l--~~~kk~--------- 153 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFEL--AVNKKA--------- 153 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHH--HHHhcc---------
Confidence 2334456777777777777666432 23567888888888888885332222211 01111 111111
Q ss_pred ccCCCccEEeCCCCcCCCCcc---cccccCCCCCceeeccCccccCccc---chhhcccccceEEEecCCccCCCC---c
Q 000889 271 DSSGSLKYLDLSHNNFTGKFS---NLDFGRCGNLSVITLSQNGLSGTEF---PASLKNCQLLETLNMSHNALQGGI---P 341 (1237)
Q Consensus 271 ~~~~~L~~L~Ls~N~l~~~~~---~~~~~~l~~L~~L~L~~n~l~~~~~---~~~l~~l~~L~~L~Ls~N~l~~~~---~ 341 (1237)
...+.|+.+..+.|++..... ...|..++.|+.+.+..|.|...++ ...+..|++|++|||.+|-++... -
T Consensus 154 ~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~L 233 (382)
T KOG1909|consen 154 ASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVAL 233 (382)
T ss_pred CCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHH
Confidence 112356666666665543221 1235566777777777776643322 346677888888888888776332 1
Q ss_pred hhhhccCCCCcEEecCCCcCCCCCchhHhhhc----CCCcEEEcccCcCCCC----CCcCcccccccceeeccCccc
Q 000889 342 GFLLGSFRNLKQLSLAHNQFAGEIPPELGQAC----GTLRELDLSSNRLTGE----LPSTFASCSSLHSLNLGSNML 410 (1237)
Q Consensus 342 ~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l 410 (1237)
...+..+++|++|++++|.+.......++..+ |+|+.|.|.+|.|+.. +...+...+.|+.|+|++|++
T Consensus 234 akaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 234 AKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 22355667788888888888766555554433 5777888888877632 223344567777777777777
No 462
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=3.2e-13 Score=148.05 Aligned_cols=187 Identities=21% Similarity=0.194 Sum_probs=112.9
Q ss_pred hhcCcccceecccCCcccCCcccccccccCCccceEEccCCccCC-----CccccCCcccEEEcCCCCCCCchhhhcccc
Q 000889 147 KTSSCSLVTMDLSSNNITGSLPGRSFLLSCDRLSYVNLSHNSISG-----GSLHIGPSLLQLDLSGNQISDSALLTYSLS 221 (1237)
Q Consensus 147 ~~~~~~L~~L~Ls~n~l~g~~~~~~~l~~~~~L~~L~ls~n~l~~-----~~~~~~~~L~~L~Ls~N~i~~~~~~~~~l~ 221 (1237)
.....+|+...|.++.+... +.......|++++.||||+|-++. ...+-.|+|+.|+|+.|.+....-. ..-.
T Consensus 117 Qsn~kkL~~IsLdn~~V~~~-~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s-~~~~ 194 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVEDA-GIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISS-NTTL 194 (505)
T ss_pred hhhHHhhhheeecCcccccc-chhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccc-cchh
Confidence 34444555556666554321 111334456666666666665543 1133345666666666654321100 0012
Q ss_pred CCCCCCEEEccCCCCCch-hhhhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCC
Q 000889 222 NCQNLNLLNFSDNKLPGK-LNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGN 300 (1237)
Q Consensus 222 ~l~~L~~L~Ls~n~l~~~-~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 300 (1237)
.++.|+.|.|+.|.++.. +......+++|+.|+|++|...+ -.......+..|++|||++|++.+.......+.++.
T Consensus 195 ~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~--~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~ 272 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIIL--IKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPG 272 (505)
T ss_pred hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccc--eecchhhhhhHHhhccccCCcccccccccccccccc
Confidence 457788888999988744 45566788899999999985221 122223445688899999998875443445667888
Q ss_pred CceeeccCccccCcccchh-----hcccccceEEEecCCccC
Q 000889 301 LSVITLSQNGLSGTEFPAS-----LKNCQLLETLNMSHNALQ 337 (1237)
Q Consensus 301 L~~L~L~~n~l~~~~~~~~-----l~~l~~L~~L~Ls~N~l~ 337 (1237)
|+.|+++.|.++...+|.. ....++|++|+++.|++.
T Consensus 273 L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 273 LNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 8888888888877666654 345566677777766664
No 463
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.31 E-value=4.2e-13 Score=147.18 Aligned_cols=216 Identities=23% Similarity=0.225 Sum_probs=127.0
Q ss_pred cCCCCCCEEEccCCCCCchhh-hhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCC
Q 000889 221 SNCQNLNLLNFSDNKLPGKLN-ATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCG 299 (1237)
Q Consensus 221 ~~l~~L~~L~Ls~n~l~~~~~-~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~ 299 (1237)
+++.+|+...|.++.+..... .....|++++.||||.|.+....+..-++..+++|+.|+|+.|++.-......-.-++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 566777777777777643322 4566788888888888888877777777788888888888888886433333333466
Q ss_pred CCceeeccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEE
Q 000889 300 NLSVITLSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLREL 379 (1237)
Q Consensus 300 ~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L 379 (1237)
.|+.|.|+.|.++..++...+..+++|+.|+|+.|... .+.......+..|++|+|++|++- ..+.
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~-~~~~~~~~i~~~L~~LdLs~N~li-~~~~------------ 263 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEII-LIKATSTKILQTLQELDLSNNNLI-DFDQ------------ 263 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhccccc-ceecchhhhhhHHhhccccCCccc-cccc------------
Confidence 67777777777766555566666666666666666411 111111223344555555555443 2220
Q ss_pred EcccCcCCCCCCcCcccccccceeeccCccccCcccchh-----ccccccceEEeccCCCCCCC-CCccCCCCCCCcEEE
Q 000889 380 DLSSNRLTGELPSTFASCSSLHSLNLGSNMLSGNFLNTV-----VSKISSLIYLYVPFNNISGP-VPLSLTNCTQLRVLD 453 (1237)
Q Consensus 380 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~~l~~L~~L~L~~N~i~~~-~~~~l~~l~~L~~L~ 453 (1237)
-...+.++.|+.|+++.+.+.....++. ...+++|++|+++.|+|... .-..+..+.+|+.|.
T Consensus 264 -----------~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~ 332 (505)
T KOG3207|consen 264 -----------GYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLR 332 (505)
T ss_pred -----------ccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhh
Confidence 1223344444444444444443222222 23455666666666666432 123455567778888
Q ss_pred ccCCcCcc
Q 000889 454 LSSNGFTG 461 (1237)
Q Consensus 454 Ls~N~l~~ 461 (1237)
+..|.++.
T Consensus 333 ~~~n~ln~ 340 (505)
T KOG3207|consen 333 ITLNYLNK 340 (505)
T ss_pred cccccccc
Confidence 88888874
No 464
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.29 E-value=1.5e-11 Score=145.68 Aligned_cols=140 Identities=20% Similarity=0.244 Sum_probs=99.1
Q ss_pred CceecccCCeEEEEEEECCCCEEEEEEeccccCcC--------------------------H--------------HHHH
Q 000889 933 DSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQG--------------------------D--------------REFM 972 (1237)
Q Consensus 933 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~--------------~~~~ 972 (1237)
.+.||.|++|.||+|+.++|+.||||+..+..... . -+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999999999999875321000 0 0244
Q ss_pred HHHHHHHhcC-----CCCcccccceE-EeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHH-HHHHH
Q 000889 973 AEMETIGKIK-----HRNLVPLLGYC-KIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSAR-GLAFL 1045 (1237)
Q Consensus 973 ~E~~~l~~l~-----h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-~L~yL 1045 (1237)
+|.+.+.++. +++| .+-..+ ...+..++||||++|++|.++...... .. .+.+++..++. .+..+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~----~~---~~~~ia~~~~~~~l~ql 273 (437)
T TIGR01982 202 REAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA----GL---DRKALAENLARSFLNQV 273 (437)
T ss_pred HHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhc----CC---CHHHHHHHHHHHHHHHH
Confidence 4555555552 3332 222222 224567999999999999887654211 11 23456666665 46788
Q ss_pred HhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeec
Q 000889 1046 HHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1046 H~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
|.. |++|+|++|.||+++.++.++++|||++..+.
T Consensus 274 ~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 274 LRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 988 99999999999999999999999999998664
No 465
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=99.29 E-value=1.7e-13 Score=149.43 Aligned_cols=309 Identities=22% Similarity=0.256 Sum_probs=164.4
Q ss_pred ccccCCCCCCceeeeee-------------cC----CCCceeEEecCCCC-CCCccccccccCCCCCCeEEccCC-CCCc
Q 000889 80 ANWTADALTPCSWQGVS-------------CS----LNSHVTSLNLNNSG-LSGSLNLTTLTALPYLEHLNLQGN-SFSA 140 (1237)
Q Consensus 80 ~sW~~~~~~~c~W~gv~-------------c~----~~~~v~~L~L~~~~-l~~~~~~~~l~~l~~L~~L~Ls~n-~l~~ 140 (1237)
..|+..+.|.-.|+.|. |+ ..+++.+|+|.++. ..++-.-....+++++++|++.+| ++++
T Consensus 100 ~~~n~~AlD~~~~q~idL~t~~rDv~g~VV~~~~~Rcgg~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd 179 (483)
T KOG4341|consen 100 TMWNKLALDGSCWQHIDLFTFQRDVDGGVVENMISRCGGFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITD 179 (483)
T ss_pred HHhhhhhhccccceeeehhcchhcCCCcceehHhhhhccccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccH
Confidence 35766666777776554 22 12566677776652 333333445566777777777777 5666
Q ss_pred ccchhhhhcCcccceecccCCcccCCcccccccccCCccceEEccCCccCCCccccCCcccEEEcCCCCCCCchhhhccc
Q 000889 141 GDLSTSKTSSCSLVTMDLSSNNITGSLPGRSFLLSCDRLSYVNLSHNSISGGSLHIGPSLLQLDLSGNQISDSALLTYSL 220 (1237)
Q Consensus 141 ~~~~~~~~~~~~L~~L~Ls~n~l~g~~~~~~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~l 220 (1237)
..+..+...+++|++|+|..|..-..........+|++|+++++|||. +|+..++.+. +
T Consensus 180 ~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~lNlSwc~--------------------qi~~~gv~~~-~ 238 (483)
T KOG4341|consen 180 SSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYLNLSWCP--------------------QISGNGVQAL-Q 238 (483)
T ss_pred HHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHHHhhhccCc--------------------hhhcCcchHH-h
Confidence 666777777777777777775432233333344567777777777762 2333333322 2
Q ss_pred cCCCCCCEEEccCCCCCch--hhhhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcc-cccccC
Q 000889 221 SNCQNLNLLNFSDNKLPGK--LNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFS-NLDFGR 297 (1237)
Q Consensus 221 ~~l~~L~~L~Ls~n~l~~~--~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~~~ 297 (1237)
.++..++.+.+.+|.-.+. +...-+.+.-+..+|+..|...++.....+...+..|+.|+.+++.-.+... ...-.+
T Consensus 239 rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~ 318 (483)
T KOG4341|consen 239 RGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQH 318 (483)
T ss_pred ccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcC
Confidence 5555566665555532111 2222334455566666565544444444445556667777776663322222 122245
Q ss_pred CCCCceeeccCc-cccCcccchhhcccccceEEEecCCccC-CCCchhhhccCCCCcEEecCCCcC-CCCCchhH---hh
Q 000889 298 CGNLSVITLSQN-GLSGTEFPASLKNCQLLETLNMSHNALQ-GGIPGFLLGSFRNLKQLSLAHNQF-AGEIPPEL---GQ 371 (1237)
Q Consensus 298 l~~L~~L~L~~n-~l~~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~~l~~L~~L~L~~n~l-~~~ip~~~---~~ 371 (1237)
+++|++|-++.| ++++..+...-.+++.|+.+++..+... +.--.....+++.|+.|.|++|.. +++....+ ..
T Consensus 319 ~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c 398 (483)
T KOG4341|consen 319 CHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSC 398 (483)
T ss_pred CCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccc
Confidence 677777777777 3555554444556677777777776532 111112234556677777776643 21110111 11
Q ss_pred hcCCCcEEEcccCcCC-CCCCcCcccccccceeeccCcc
Q 000889 372 ACGTLRELDLSSNRLT-GELPSTFASCSSLHSLNLGSNM 409 (1237)
Q Consensus 372 ~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~ 409 (1237)
....|+.+.|+++... ...-..+..+++|+.++|-.++
T Consensus 399 ~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 399 SLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred cccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 2245666666666543 2223344555666666665553
No 466
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.28 E-value=2.9e-12 Score=152.40 Aligned_cols=193 Identities=33% Similarity=0.490 Sum_probs=80.3
Q ss_pred EEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCC-cccceecccCceeeecccccccccccccEecc
Q 000889 427 YLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNF-PALEKIVLPNNYLSGTVPLELGSCKNLKTIDL 505 (1237)
Q Consensus 427 ~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 505 (1237)
.+.+..|.+... ...+..++.++.|++.+|.++.. |... ..+ ++|+.|++++|.+. .+|..+..+++|+.|++
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~~i-~~~~---~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l 170 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNITDI-PPLI---GLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDL 170 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccccC-cccc---ccchhhcccccccccchh-hhhhhhhcccccccccc
Confidence 455555554311 22333445566666666665522 2221 112 14455555555544 23333444445555555
Q ss_pred cCCccccCCCccccCCcCcceeecccccccCcccccccccCCCccEEEccccccccccccccccCCCccEEEeecccccc
Q 000889 506 SFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTG 585 (1237)
Q Consensus 506 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 585 (1237)
++|+++ .+|...+.+++|+.|++++|+++ .+|..+ .....|++|.+++|.+. ..+..+..+.++..|.+.+|++.
T Consensus 171 ~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~-~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~- 245 (394)
T COG4886 171 SFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEI-ELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE- 245 (394)
T ss_pred CCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhh-hhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-
Confidence 555544 33333334444444444444444 333322 11122444444444322 23333444444444444444444
Q ss_pred cCCccccCccccceEEecCCccccCCCCCCCCCCCCCEEECCCCccc
Q 000889 586 EIPAGIGNLVKLAILQLGNNSLTGQVPQGLGKCRSLVWLDLNSNNLS 632 (1237)
Q Consensus 586 ~~p~~~~~L~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 632 (1237)
.++..++.+++|+.|++++|.++ .++. ++.+.+|+.|++++|.++
T Consensus 246 ~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 246 DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred eccchhccccccceecccccccc-cccc-ccccCccCEEeccCcccc
Confidence 22334444444444444444444 2222 344444444444444443
No 467
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=7.6e-12 Score=132.31 Aligned_cols=214 Identities=22% Similarity=0.273 Sum_probs=145.3
Q ss_pred HHHHHHhcCCCCcccccceEEeC-----CeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhc
Q 000889 974 EMETIGKIKHRNLVPLLGYCKIG-----EERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHS 1048 (1237)
Q Consensus 974 E~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~ 1048 (1237)
-+.-+-++.|-|+|+++.|+.+. .+..++.|||.-|++..++++..+. ...+....-.+|+-||..||.|||+.
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-~~a~~~~~wkkw~tqIlsal~yLhs~ 195 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-QKALFQKAWKKWCTQILSALSYLHSC 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhhhhcc
Confidence 34445666799999999988653 4568999999999999999876543 35667777789999999999999996
Q ss_pred CCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCc--ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHH
Q 000889 1049 CIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDT--HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLE 1126 (1237)
Q Consensus 1049 ~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~e 1126 (1237)
.|+|+|+++..+-|++..+|-+|+.---.......... ........+-++|.|||.-.....+.++|||+||+...|
T Consensus 196 -~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 196 -DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred -CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 67899999999999999999888752111110000000 000122346789999999887778889999999999999
Q ss_pred HHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1127 LLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1127 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
|..+..--..++.. .... ..-...+...-++ + =...+.+|+...|..||+|.+++.+.-.
T Consensus 275 mailEiq~tnseS~---~~~e----e~ia~~i~~len~-l------------qr~~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 275 MAILEIQSTNSESK---VEVE----ENIANVIIGLENG-L------------QRGSITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred HHHheeccCCCcce---eehh----hhhhhheeeccCc-c------------ccCcCcccccCCCCCCcchhhhhcCcee
Confidence 99876542211100 0000 0000000000000 0 0135568999999999999999888655
Q ss_pred ccc
Q 000889 1207 LQV 1209 (1237)
Q Consensus 1207 l~~ 1209 (1237)
+.+
T Consensus 335 feV 337 (458)
T KOG1266|consen 335 FEV 337 (458)
T ss_pred eec
Confidence 544
No 468
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=6.8e-12 Score=145.32 Aligned_cols=249 Identities=21% Similarity=0.220 Sum_probs=179.2
Q ss_pred CCCCCceecc--cCCeEEEEEEE--C-CCCEEEEEEecc--ccCcCHHHHHHHHHHHHhcC-CCCcccccceEEeCCeEE
Q 000889 929 GFSADSMIGS--GGFGEVYKAQL--R-DGSVVAIKKLIH--VTGQGDREFMAEMETIGKIK-HRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 929 ~~~~~~~lG~--G~fg~Vy~~~~--~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 1000 (1237)
.|.+.+.+|. |.+|.||.+.. . ++..+|+|+-.. ..+.....-.+|+...+.++ |++.++.+..+..++..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566778999 99999999987 3 577889987432 22233334456777777774 999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCCeeeCCC-CceEEee
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSAR----GLAFLHHSCIPHIIHRDMKSSNVLLDEN-FEARVSD 1075 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~ivHrDikp~NIll~~~-~~vkl~D 1075 (1237)
+-+|++. .++.++.+.... .++....+.+..+..+ |+.++|+. .++|-|+||.||+...+ ...+++|
T Consensus 195 iqtE~~~-~sl~~~~~~~~~----~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCN----FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred eeecccc-chhHHhhhcccc----cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCC
Confidence 9999985 788888766432 3566667777777777 99999999 99999999999999999 8899999
Q ss_pred cccceeeccCCccee---eeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHH
Q 000889 1076 FGMARLVNALDTHLS---VSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQL 1152 (1237)
Q Consensus 1076 fGla~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1152 (1237)
||+...+....-... .....|...|++||+..+ .++.++|+|++|.++.+..++..+...... ..|...
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~------~~W~~~- 338 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN------SSWSQL- 338 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC------CCcccc-
Confidence 999987765442211 123367888999999876 678899999999999999998777543211 111111
Q ss_pred hhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 000889 1153 HREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAM 1203 (1237)
Q Consensus 1153 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~ 1203 (1237)
+... .....+..-..++...+.+|++.+|..|++...+..+
T Consensus 339 ------r~~~----ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 339 ------RQGY----IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ------cccc----CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 0100 0001111111223336678999999999998777654
No 469
>PLN03150 hypothetical protein; Provisional
Probab=99.24 E-value=2.4e-11 Score=150.78 Aligned_cols=79 Identities=30% Similarity=0.539 Sum_probs=57.3
Q ss_pred CCCchhHHHHHHhhccccCCCCCCCcccccCCCCCCc----eeeeeecCC---C--CceeEEecCCCCCCCccccccccC
Q 000889 54 SGGNEELTILMAFKQSSIGSDPNGYLANWTADALTPC----SWQGVSCSL---N--SHVTSLNLNNSGLSGSLNLTTLTA 124 (1237)
Q Consensus 54 ~~~~~~~~aLl~~k~~~~~~~~~~~l~sW~~~~~~~c----~W~gv~c~~---~--~~v~~L~L~~~~l~~~~~~~~l~~ 124 (1237)
.+.++|..||++||+++ .++.. .+|+.. .|| .|.||+|+. . .+|+.|+|+++++.|.++ ..+..
T Consensus 368 ~t~~~~~~aL~~~k~~~--~~~~~--~~W~g~--~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip-~~i~~ 440 (623)
T PLN03150 368 KTLLEEVSALQTLKSSL--GLPLR--FGWNGD--PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIP-NDISK 440 (623)
T ss_pred ccCchHHHHHHHHHHhc--CCccc--CCCCCC--CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCC-HHHhC
Confidence 45678999999999975 34432 589752 332 799999952 1 258999999999988776 45777
Q ss_pred CCCCCeEEccCCCCC
Q 000889 125 LPYLEHLNLQGNSFS 139 (1237)
Q Consensus 125 l~~L~~L~Ls~n~l~ 139 (1237)
+++|+.|+|++|.+.
T Consensus 441 L~~L~~L~Ls~N~l~ 455 (623)
T PLN03150 441 LRHLQSINLSGNSIR 455 (623)
T ss_pred CCCCCEEECCCCccc
Confidence 777777777777663
No 470
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.17 E-value=8e-10 Score=129.03 Aligned_cols=233 Identities=17% Similarity=0.253 Sum_probs=155.0
Q ss_pred CCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHH
Q 000889 950 RDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWA 1029 (1237)
Q Consensus 950 ~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~ 1029 (1237)
.++.+|.|...............+-++.++.++||+|+++++.+...+..|+|+|.+. .|..++... ...
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l--------~~~ 104 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL--------GKE 104 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh--------HHH
Confidence 3577888887765444334556778899999999999999999999999999999984 688888653 245
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeeccCCcceeeeccccCCCcCCccccCcc
Q 000889 1030 ARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSF 1109 (1237)
Q Consensus 1030 ~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 1109 (1237)
.....+.||+.||.|||+.+ +++|++|..+.|++++.|..||++|.++........ ......--..|..|+.+...
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCcc
Confidence 56667899999999999776 899999999999999999999999998875543332 11112222356777765432
Q ss_pred ccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhcccc
Q 000889 1110 RCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDD 1189 (1237)
Q Consensus 1110 ~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~ 1189 (1237)
. -..|.|-||+++||++.|..+-.... ...+........ .. ..+....... .+ ...+++..|...
T Consensus 181 ~--~s~D~~~Lg~li~el~ng~~~~~~~~-~~~~~ipk~~~~-~~---~k~~~~~~~~----r~----n~~~~~~~~~~~ 245 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNGSLLTKTDL-SNTGKIPKALIE-LY---CKKLGATELK----RP----NKLRFILECRLL 245 (690)
T ss_pred c--cchhhhhHHHHHHHHhCcccCcchhh-hccCccchhHHH-HH---HHHhcccccc----cc----chhhHHHHHHhc
Confidence 2 34699999999999999933311100 000000000000 00 0000000000 00 134566677777
Q ss_pred CCCCCCCHHHHHHHHHhccccc
Q 000889 1190 RPFKRPTMIQVMAMFKELQVDT 1211 (1237)
Q Consensus 1190 dP~~RPt~~ell~~L~~l~~~~ 1211 (1237)
..--|=..-+++..|+++....
T Consensus 246 ~gff~n~fvd~~~fLeel~lks 267 (690)
T KOG1243|consen 246 GGFFRNDFVDTLLFLEELRLKS 267 (690)
T ss_pred cccccchHHHHHHHHHhcccCc
Confidence 7777778888888888776543
No 471
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.16 E-value=5.2e-11 Score=142.31 Aligned_cols=147 Identities=20% Similarity=0.219 Sum_probs=93.7
Q ss_pred hCCCCCCceecccCCeEEEEEEECC-CCEEEEEEeccccCc--------------------------C--------HH--
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIHVTGQ--------------------------G--------DR-- 969 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~--------------------------~--------~~-- 969 (1237)
...|+. +.||.|++|.||+|++++ |+.||||+..+.... . .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 789999999999999987 999999988642100 0 01
Q ss_pred ----HHHHHHHHHHhcC----CCCcccccceEEe-CCeEEEEEEeccCCCHHHHHhhhhcC-CCCccCHHHHHHHHHHHH
Q 000889 970 ----EFMAEMETIGKIK----HRNLVPLLGYCKI-GEERLLVYEYMKWGSLESVLHDRAKG-GGTKLDWAARKKIAIGSA 1039 (1237)
Q Consensus 970 ----~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia 1039 (1237)
++.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++-.-...+ ....+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 1333444444442 3332333222222 45678999999999998753221111 00122222233333333
Q ss_pred HHHHHHHhcCCCCeeecCCCCCCeeeCCCC----ceEEeecccceeecc
Q 000889 1040 RGLAFLHHSCIPHIIHRDMKSSNVLLDENF----EARVSDFGMARLVNA 1084 (1237)
Q Consensus 1040 ~~L~yLH~~~~~~ivHrDikp~NIll~~~~----~vkl~DfGla~~~~~ 1084 (1237)
+.. |++|+|+||.||+++.++ .++++|||++..+..
T Consensus 277 ------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 345 999999999999999888 999999999987754
No 472
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.12 E-value=2e-10 Score=119.22 Aligned_cols=129 Identities=19% Similarity=0.102 Sum_probs=95.2
Q ss_pred ceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcc-cccceEEeCCeEEEEEEeccCCCHH
Q 000889 934 SMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLV-PLLGYCKIGEERLLVYEYMKWGSLE 1012 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gsL~ 1012 (1237)
+.++.|.++.||+++.. ++.+++|....... ....+..|+++++.+.+.+++ +++++. .+..++||||++|.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 56899999999999976 77899997654321 223467899999998655544 454443 33458999999998875
Q ss_pred HHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCeeeCCCCceEEeecccce
Q 000889 1013 SVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSC--IPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1080 (1237)
Q Consensus 1013 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivHrDikp~NIll~~~~~vkl~DfGla~ 1080 (1237)
+. . .....++.+++++++.||+.. ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 80 ~~--~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 80 TE--D-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cc--c-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 42 0 011245678999999999982 11259999999999999 6689999999885
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.06 E-value=3.9e-11 Score=124.99 Aligned_cols=65 Identities=28% Similarity=0.488 Sum_probs=42.5
Q ss_pred CCCCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCC--CcccCcccccceecccccccccCC
Q 000889 733 SLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIP--GSLGGLSFLSDLDVSNNNLSGIIP 800 (1237)
Q Consensus 733 ~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~l~l~~N~l~g~~p 800 (1237)
.|-+.+.|+|++|.+.. + ..++.|-+|..||+++|+|. .+. ..+++|+-|+.+.|.+|++.+.+-
T Consensus 350 KLGNIKtL~La~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKIET-L-SGLRKLYSLVNLDLSSNQIE-ELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhcCEeeeehhhhhHhh-h-hhhHhhhhheeccccccchh-hHHHhcccccccHHHHHhhcCCCccccch
Confidence 33444555555555541 1 23455666777777777776 332 467888889999999999988665
No 474
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=5.3e-11 Score=123.98 Aligned_cols=132 Identities=23% Similarity=0.304 Sum_probs=97.5
Q ss_pred ccccccccEecccCCccccCCCccccCCcCcceeecccccccCcccccccccCCCccEEEccccccccccccccccCCCc
Q 000889 494 LGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVNGGNLETLILNNNHLTGAIPKSIASCTNM 573 (1237)
Q Consensus 494 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 573 (1237)
+..+..|+++|||+|.|+ .+.+++.-+|.++.|++++|.+. .+.. ...+++|+.||||+|.++ .+..+-..+.+.
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n--La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN--LAELPQLQLLDLSGNLLA-ECVGWHLKLGNI 354 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh--hhhcccceEeecccchhH-hhhhhHhhhcCE
Confidence 344566777777777777 56667777777777888877776 4443 345678888888888887 555566677888
Q ss_pred cEEEeecccccccCCccccCccccceEEecCCccccCC--CCCCCCCCCCCEEECCCCcccc
Q 000889 574 LWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQV--PQGLGKCRSLVWLDLNSNNLSG 633 (1237)
Q Consensus 574 ~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~g 633 (1237)
+.|.|++|.|. .-..++.|-+|..||+++|+|. .+ -..+++++-|+.+.|.+|++.+
T Consensus 355 KtL~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 355 KTLKLAQNKIE--TLSGLRKLYSLVNLDLSSNQIE-ELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred eeeehhhhhHh--hhhhhHhhhhheeccccccchh-hHHHhcccccccHHHHHhhcCCCccc
Confidence 88888888887 2245677788888888888887 33 2468888889999999998874
No 475
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=99.05 E-value=1.2e-11 Score=135.18 Aligned_cols=276 Identities=21% Similarity=0.231 Sum_probs=149.4
Q ss_pred CCc-eeeeeecCCCCceeEEecCCCC--CCCccccccccCCC-CCCeEEccCCC-CCcccchhhhhcCcccceecccCCc
Q 000889 88 TPC-SWQGVSCSLNSHVTSLNLNNSG--LSGSLNLTTLTALP-YLEHLNLQGNS-FSAGDLSTSKTSSCSLVTMDLSSNN 162 (1237)
Q Consensus 88 ~~c-~W~gv~c~~~~~v~~L~L~~~~--l~~~~~~~~l~~l~-~L~~L~Ls~n~-l~~~~~~~~~~~~~~L~~L~Ls~n~ 162 (1237)
.|| .|.+-.-+. +.=+.+||.... ..|......+..+- +|+.|.|+|+. ..+.++..+...++++++|++.+|.
T Consensus 97 ~~c~~~n~~AlD~-~~~q~idL~t~~rDv~g~VV~~~~~Rcgg~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~ 175 (483)
T KOG4341|consen 97 QCCTMWNKLALDG-SCWQHIDLFTFQRDVDGGVVENMISRCGGFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCK 175 (483)
T ss_pred HHHHHhhhhhhcc-ccceeeehhcchhcCCCcceehHhhhhccccccccccccccCCcchhhHHhhhCCchhhhhhhcce
Confidence 455 487655441 223345554432 23333333333333 56777777663 3444444444444444444444443
Q ss_pred ccCCcccccccccCCccceEEccCCccCCCccccCCcccEEEcCCC-CCCCchhhhccccCCCCCCEEEccCCC-CCch-
Q 000889 163 ITGSLPGRSFLLSCDRLSYVNLSHNSISGGSLHIGPSLLQLDLSGN-QISDSALLTYSLSNCQNLNLLNFSDNK-LPGK- 239 (1237)
Q Consensus 163 l~g~~~~~~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~Ls~N-~i~~~~~~~~~l~~l~~L~~L~Ls~n~-l~~~- 239 (1237)
...+.....+. ..++.|+.|+|..| .|++..++.. -..|++|++|++|+|. |++.
T Consensus 176 ~iTd~s~~sla---------------------~~C~~l~~l~L~~c~~iT~~~Lk~l-a~gC~kL~~lNlSwc~qi~~~g 233 (483)
T KOG4341|consen 176 KITDSSLLSLA---------------------RYCRKLRHLNLHSCSSITDVSLKYL-AEGCRKLKYLNLSWCPQISGNG 233 (483)
T ss_pred eccHHHHHHHH---------------------HhcchhhhhhhcccchhHHHHHHHH-HHhhhhHHHhhhccCchhhcCc
Confidence 22222222222 23445556666664 4666555433 2689999999999995 4432
Q ss_pred hhhhcccCCCccEEEcccccccCccchhhhhccCCCccEEeCCCC-cCCCCcccccccCCCCCceeeccCc-cccCcccc
Q 000889 240 LNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHN-NFTGKFSNLDFGRCGNLSVITLSQN-GLSGTEFP 317 (1237)
Q Consensus 240 ~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N-~l~~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~ 317 (1237)
+...+.+++.++.+-+.+|.=.+.-........+.-+..+++.+| .+++......-..+..|++|..+++ .+++..+-
T Consensus 234 v~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~ 313 (483)
T KOG4341|consen 234 VQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLW 313 (483)
T ss_pred chHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHH
Confidence 334566788888887777664433222333444556777777777 4443322223345777888888777 45544444
Q ss_pred hhhcccccceEEEecCCc-cCCCCchhhhccCCCCcEEecCCCcCCCCC-chhHhhhcCCCcEEEcccCcC
Q 000889 318 ASLKNCQLLETLNMSHNA-LQGGIPGFLLGSFRNLKQLSLAHNQFAGEI-PPELGQACGTLRELDLSSNRL 386 (1237)
Q Consensus 318 ~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~~L~~L~L~~n~l~~~i-p~~~~~~l~~L~~L~Ls~N~l 386 (1237)
..-+++.+|+.|-++.++ +++..-...-.+.+.|+.+++..+...... -..+...++.|+.|.|+++.+
T Consensus 314 aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~ 384 (483)
T KOG4341|consen 314 ALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCEL 384 (483)
T ss_pred HHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhh
Confidence 444667778888888776 443333333345566777777766433111 233444556677777766644
No 476
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=2.7e-10 Score=115.80 Aligned_cols=110 Identities=28% Similarity=0.376 Sum_probs=38.4
Q ss_pred cCCCCCceeeccCccccCcccchhhc-ccccceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcC
Q 000889 296 GRCGNLSVITLSQNGLSGTEFPASLK-NCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACG 374 (1237)
Q Consensus 296 ~~l~~L~~L~L~~n~l~~~~~~~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~ 374 (1237)
.++.++++|+|++|+|+.++ .+. .+.+|+.|+|++|.|+ .++. +..+++|++|++++|+|+ .+.+.+...++
T Consensus 16 ~n~~~~~~L~L~~n~I~~Ie---~L~~~l~~L~~L~Ls~N~I~-~l~~--l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp 88 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTIE---NLGATLDKLEVLDLSNNQIT-KLEG--LPGLPRLKTLDLSNNRIS-SISEGLDKNLP 88 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---TT------TT--EEE--SS----S-CHHHHHH-T
T ss_pred cccccccccccccccccccc---chhhhhcCCCEEECCCCCCc-cccC--ccChhhhhhcccCCCCCC-ccccchHHhCC
Confidence 34455667777777765432 243 4677788888888877 3443 456788888888888887 66655555568
Q ss_pred CCcEEEcccCcCCCCC-CcCcccccccceeeccCccccC
Q 000889 375 TLRELDLSSNRLTGEL-PSTFASCSSLHSLNLGSNMLSG 412 (1237)
Q Consensus 375 ~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~ 412 (1237)
+|++|+|++|+|.... -..++.+++|+.|+|.+|.++.
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 8888888888886432 2456667788888888887763
No 477
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.03 E-value=2.5e-09 Score=111.01 Aligned_cols=136 Identities=16% Similarity=0.167 Sum_probs=98.1
Q ss_pred ceecccCCeEEEEEEECC-------CCEEEEEEecccc------------C---------cC-HHHH----HHHHHHHHh
Q 000889 934 SMIGSGGFGEVYKAQLRD-------GSVVAIKKLIHVT------------G---------QG-DREF----MAEMETIGK 980 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~------------~---------~~-~~~~----~~E~~~l~~ 980 (1237)
..||.|--+.||.|...+ +..+|||..+... . .. .+.+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998653 4789999664110 0 01 1122 279999999
Q ss_pred cCC--CCcccccceEEeCCeEEEEEEeccCCCHHH-HHhhhhcCCCCccCHHHHHHHHHHHHHHHHHH-HhcCCCCeeec
Q 000889 981 IKH--RNLVPLLGYCKIGEERLLVYEYMKWGSLES-VLHDRAKGGGTKLDWAARKKIAIGSARGLAFL-HHSCIPHIIHR 1056 (1237)
Q Consensus 981 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivHr 1056 (1237)
+.. -++++++++ ...++||||+.++.+.. .+++ ..++......+..+++.++.++ |.. ++||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHG 149 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHA 149 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 953 466777754 56789999997654322 1221 1334455667889999999999 788 99999
Q ss_pred CCCCCCeeeCCCCceEEeecccceeec
Q 000889 1057 DMKSSNVLLDENFEARVSDFGMARLVN 1083 (1237)
Q Consensus 1057 Dikp~NIll~~~~~vkl~DfGla~~~~ 1083 (1237)
|+++.||++++ +.++++|||.|...+
T Consensus 150 DLs~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 150 DLSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCHHHEEEEC-CcEEEEECCCceeCC
Confidence 99999999974 689999999987554
No 478
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.01 E-value=4e-09 Score=104.87 Aligned_cols=131 Identities=21% Similarity=0.311 Sum_probs=99.5
Q ss_pred ceecccCCeEEEEEEECCCCEEEEEEeccccCcCH--------HHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEEEe
Q 000889 934 SMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGD--------REFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEY 1005 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~--------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 1005 (1237)
..+++|+-+.+|.+.+. |..+++|.-.+...... ....+|++++.+++--.|...+=+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999876 44566665443322211 2356799999998765665555566677888999999
Q ss_pred ccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1006 MKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1006 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
++|..|.+++... ...++..+-.-+.-||.. +|||+|+.++||.+..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888753 134555666667889999 999999999999998775 99999999974
No 479
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=4.2e-10 Score=114.47 Aligned_cols=125 Identities=26% Similarity=0.285 Sum_probs=34.3
Q ss_pred cccEEEcCCCCCCCchhhhcccc-CCCCCCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchhhhhccCCCcc
Q 000889 199 SLLQLDLSGNQISDSALLTYSLS-NCQNLNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLK 277 (1237)
Q Consensus 199 ~L~~L~Ls~N~i~~~~~~~~~l~-~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~ 277 (1237)
.+++|+|++|+|+.+. .++ .+.+|+.|+|++|+|+.+. .+..++.|++|++++|.++...+ .+ ...+++|+
T Consensus 20 ~~~~L~L~~n~I~~Ie----~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~-~l-~~~lp~L~ 91 (175)
T PF14580_consen 20 KLRELNLRGNQISTIE----NLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISE-GL-DKNLPNLQ 91 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CH-HH-HHH-TT--
T ss_pred cccccccccccccccc----chhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCcccc-ch-HHhCCcCC
Confidence 4555666666655422 222 3455666666666665332 34445555555555555543211 11 11234444
Q ss_pred EEeCCCCcCCCCcccccccCCCCCceeeccCccccCcccchhhcccccceEEEecCCccCCCC--chhhhccCCCCcEEe
Q 000889 278 YLDLSHNNFTGKFSNLDFGRCGNLSVITLSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGI--PGFLLGSFRNLKQLS 355 (1237)
Q Consensus 278 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~~~l~~L~~L~ 355 (1237)
+|+|++|+|. +..--..+..+++|++|+|.+|.++... ...++..+|+|+.||
T Consensus 92 ~L~L~~N~I~-------------------------~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 92 ELYLSNNKIS-------------------------DLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp EEE-TTS----------------------------SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred EEECcCCcCC-------------------------ChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 4444444444 3322234555666666666666655321 123455667777766
Q ss_pred c
Q 000889 356 L 356 (1237)
Q Consensus 356 L 356 (1237)
-
T Consensus 147 ~ 147 (175)
T PF14580_consen 147 G 147 (175)
T ss_dssp T
T ss_pred C
Confidence 4
No 480
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.97 E-value=7.5e-10 Score=128.60 Aligned_cols=247 Identities=18% Similarity=0.202 Sum_probs=173.2
Q ss_pred HhCCCCCCceecccCCeEEEEEEEC--CCCEEEEEEeccccCcCHHH--HHHHHHHHHhc-CCCCcccccceEEeCCeEE
Q 000889 926 ATNGFSADSMIGSGGFGEVYKAQLR--DGSVVAIKKLIHVTGQGDRE--FMAEMETIGKI-KHRNLVPLLGYCKIGEERL 1000 (1237)
Q Consensus 926 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 1000 (1237)
-..+|..+..||.|.|+.|+....+ ++..+++|...........+ -..|+.+...+ .|.++++++..+..-+..|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3557888999999999999998644 57788888775433222222 23466665555 4888999888887778888
Q ss_pred EEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCC-CceEEeecccc
Q 000889 1001 LVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEN-FEARVSDFGMA 1079 (1237)
Q Consensus 1001 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~-~~vkl~DfGla 1079 (1237)
+=-|||.+++....... ...++...++++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||++
T Consensus 343 ip~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred CchhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccc
Confidence 88999999988776632 14567788899999999999999999 99999999999999886 88899999998
Q ss_pred eeeccCCcceeeeccccCCCcC--CccccCccccCcccchHHHHHHHHHHHcCCCCCCCCCCCCCchHHHHHHHHhhhcc
Q 000889 1080 RLVNALDTHLSVSTLAGTPGYV--PPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSEFGDDNNLVGWAKQLHREKR 1157 (1237)
Q Consensus 1080 ~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1157 (1237)
..+.... ....++.+++ +|+......+-.++|++|||.-+.|..+|..--. .. ..|
T Consensus 415 t~~~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~-~~-------~~~--------- 472 (524)
T KOG0601|consen 415 TRLAFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE-SG-------VQS--------- 472 (524)
T ss_pred cccceec-----ccccccccccccchhhccccccccccccccccccccccccCcccCc-cc-------ccc---------
Confidence 6432211 1223344455 5555566677889999999999999999865421 10 001
Q ss_pred cccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHh
Q 000889 1158 INEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMIQVMAMFKE 1206 (1237)
Q Consensus 1158 ~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~~L~~ 1206 (1237)
..+.....+...... ..+..+...+..+++..||.+.++..+.+.
T Consensus 473 -~~i~~~~~p~~~~~~---~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 473 -LTIRSGDTPNLPGLK---LQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred -eeeecccccCCCchH---HhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 111111111111111 345566667899999999999888766543
No 481
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.96 E-value=1e-08 Score=101.04 Aligned_cols=143 Identities=16% Similarity=0.194 Sum_probs=106.6
Q ss_pred CCceecccCCeEEEEEEECCCCEEEEEEeccccCcC--------HHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEEE
Q 000889 932 ADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQG--------DREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVY 1003 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 1003 (1237)
....+-+|+-+.|+++.+. |+...||.-....... .+...+|++.+.+++--.|.-..=++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4568899999999999986 7777777554322111 235678999999987555555555666777788999
Q ss_pred EeccC-CCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCC---ceEEeecccc
Q 000889 1004 EYMKW-GSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENF---EARVSDFGMA 1079 (1237)
Q Consensus 1004 e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~---~vkl~DfGla 1079 (1237)
||++| .++.+++...... .........++..|-+.+.-||.. +++|+|+..+||++..++ .+.++|||++
T Consensus 90 E~~~g~~~vk~~i~~~~~~---~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls 163 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMED---ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLS 163 (229)
T ss_pred EeccchhHHHHHHHHHccC---cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecch
Confidence 99986 3788988775432 222223366788888889999999 999999999999996544 3589999998
Q ss_pred ee
Q 000889 1080 RL 1081 (1237)
Q Consensus 1080 ~~ 1081 (1237)
..
T Consensus 164 ~~ 165 (229)
T KOG3087|consen 164 SV 165 (229)
T ss_pred hc
Confidence 63
No 482
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.92 E-value=3.2e-10 Score=137.46 Aligned_cols=249 Identities=21% Similarity=0.277 Sum_probs=166.9
Q ss_pred hCCCCCCceecccCCeEEEEEEECC-CCEEEEEEecc---ccCcCHHHHHHHHHHHHhcCCCCcccccceEEeCCeEEEE
Q 000889 927 TNGFSADSMIGSGGFGEVYKAQLRD-GSVVAIKKLIH---VTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLV 1002 (1237)
Q Consensus 927 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 1002 (1237)
.+.+.+.+-+-.|.++.++.++-.. |...+.|.... ....+.+....+-.+.-.-++|.+++....+......+++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 3456667788899999999876442 33333332221 1111222222333333334467777666666667888999
Q ss_pred EEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceee
Q 000889 1003 YEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLV 1082 (1237)
Q Consensus 1003 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~ 1082 (1237)
++|..+++|..-++... ..+...++.....+.++.+|||.. .++|||++|.|.+...+++.+++|||.....
T Consensus 883 ~~~~~~~~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG-----CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hHHhccCCchhhhhcCC-----CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 99999999999887642 344445556667788899999998 7999999999999999999999999843322
Q ss_pred ccC---------------------Cc--------ceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCC
Q 000889 1083 NAL---------------------DT--------HLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRP 1133 (1237)
Q Consensus 1083 ~~~---------------------~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p 1133 (1237)
.-. .. ........||+.|.|||...+.....++|+|+.|++++|.++|.+|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 110 00 0112345689999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchHHHHHHHHhhhcccccccCccccCCCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 000889 1134 IDPSEFGDDNNLVGWAKQLHREKRINEILDPELTMQTSDETELYQYLRISFECLDDRPFKRPTMI 1198 (1237)
Q Consensus 1134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 1198 (1237)
|.....+ ..+..+.....+.+...........+++...+..+|.+|-.+.
T Consensus 1035 ~na~tpq---------------~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQ---------------QIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcchh---------------hhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 9754321 1122233333333333333334445666677778888888766
No 483
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.91 E-value=2.2e-10 Score=136.41 Aligned_cols=267 Identities=25% Similarity=0.251 Sum_probs=140.9
Q ss_pred cceEEEecCCccCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEEEcccCcCCCCCCcCcccccccceee
Q 000889 325 LLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLRELDLSSNRLTGELPSTFASCSSLHSLN 404 (1237)
Q Consensus 325 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 404 (1237)
.++.++..++.+.. .... ...+..++.+++..|.+. .+-..+. .+.+|+.|++.+|+|..+ ...+..+++|++|+
T Consensus 50 ~~~~~~~~~~~~~~-~~~~-~~~l~~l~~l~l~~n~i~-~~~~~l~-~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ 124 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGS-DEDL-VESLTSLKELNLRQNLIA-KILNHLS-KLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLD 124 (414)
T ss_pred hhhhhcchhccccc-hhhh-HHHhHhHHhhccchhhhh-hhhcccc-cccceeeeeccccchhhc-ccchhhhhcchhee
Confidence 45555665554431 1111 134556666666666665 3222222 235666666766666632 22255566666666
Q ss_pred ccCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecccCc
Q 000889 405 LGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNN 484 (1237)
Q Consensus 405 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N 484 (1237)
|++|.|+.. ..+..++.|+.|++++|.|+.. ..+..++.|+.++ +++|
T Consensus 125 ls~N~I~~i---~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~---------------------------l~~n 172 (414)
T KOG0531|consen 125 LSFNKITKL---EGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLD---------------------------LSYN 172 (414)
T ss_pred ccccccccc---cchhhccchhhheeccCcchhc--cCCccchhhhccc---------------------------CCcc
Confidence 666666532 1223333344444444444422 1223344444444 4444
Q ss_pred eeeeccc-ccccccccccEecccCCccccCCCccccCCcCcceeecccccccCcccccccccCC--CccEEEcccccccc
Q 000889 485 YLSGTVP-LELGSCKNLKTIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVNGG--NLETLILNNNHLTG 561 (1237)
Q Consensus 485 ~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~--~L~~L~Ls~N~l~~ 561 (1237)
.+....+ . ...+.+++.+++.+|.+. ....+..+..+..+++..|.++..-+.. .+. .|+.+++++|++.
T Consensus 173 ~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~i~~~~~l~---~~~~~~L~~l~l~~n~i~- 245 (414)
T KOG0531|consen 173 RIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNKISKLEGLN---ELVMLHLRELYLSGNRIS- 245 (414)
T ss_pred hhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhhcccccceeccCcc---cchhHHHHHHhcccCccc-
Confidence 4443222 1 344455555555555554 1222333334444455555554211111 111 2677777777776
Q ss_pred ccccccccCCCccEEEeecccccccCCccccCccccceEEecCCcccc---CCCCC-CCCCCCCCEEECCCCccccCCCh
Q 000889 562 AIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTG---QVPQG-LGKCRSLVWLDLNSNNLSGPLPS 637 (1237)
Q Consensus 562 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~---~~p~~-l~~l~~L~~L~L~~N~l~g~ip~ 637 (1237)
..+..+..+..+..|++.+|++... ..+...+.+..+.+..|.+.. ..... .+..+.++.+.+..|+.....+.
T Consensus 246 ~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 246 RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccccc
Confidence 4446667777888888888887732 234556667777778887652 12222 56677888888888888765553
No 484
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.90 E-value=7.9e-09 Score=112.39 Aligned_cols=141 Identities=19% Similarity=0.217 Sum_probs=104.9
Q ss_pred ceecccCCeEEEEEEECCCCEEEEEEeccccC-cCHHHHHHHHHHHHhcCC--CCcccccceEEeC---CeEEEEEEecc
Q 000889 934 SMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTG-QGDREFMAEMETIGKIKH--RNLVPLLGYCKIG---EERLLVYEYMK 1007 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~e~~~ 1007 (1237)
+.++.|.++.||+++..+|+.+++|....... .....+..|+++++.+.+ ..+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999987768899998754322 134568899999999975 3457777776543 25689999999
Q ss_pred CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 000889 1008 WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSC-------------------------------------- 1049 (1237)
Q Consensus 1008 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------------- 1049 (1237)
|.++.+.+.. ..++......++.++++++.+||+..
T Consensus 84 G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 84 GRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9887665421 13555666667777777777777421
Q ss_pred ---------------CCCeeecCCCCCCeeeCC--CCceEEeecccce
Q 000889 1050 ---------------IPHIIHRDMKSSNVLLDE--NFEARVSDFGMAR 1080 (1237)
Q Consensus 1050 ---------------~~~ivHrDikp~NIll~~--~~~vkl~DfGla~ 1080 (1237)
...++|+|+.|.||+++. ++.+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 235899999999999998 6778999999875
No 485
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.89 E-value=3.2e-10 Score=134.95 Aligned_cols=265 Identities=28% Similarity=0.306 Sum_probs=115.3
Q ss_pred CCcccEEEcCCCCCCCchhhhccccCCCCCCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchhhhhccCCCc
Q 000889 197 GPSLLQLDLSGNQISDSALLTYSLSNCQNLNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSL 276 (1237)
Q Consensus 197 ~~~L~~L~Ls~N~i~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L 276 (1237)
.+.++.++...+.+...... ...+..++.+++..|.+.. +...+..+++|+.|++.+|.+......
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~---~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~---------- 113 (414)
T KOG0531|consen 48 PSDLEEIDLIFNLDGSDEDL---VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENL---------- 113 (414)
T ss_pred cchhhhhcchhccccchhhh---HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccc----------
Confidence 34555566555544432111 1344555555566665543 122234444555555555554422110
Q ss_pred cEEeCCCCcCCCCcccccccCCCCCceeeccCccccCcccchhhcccccceEEEecCCccCCCCchhhhccCCCCcEEec
Q 000889 277 KYLDLSHNNFTGKFSNLDFGRCGNLSVITLSQNGLSGTEFPASLKNCQLLETLNMSHNALQGGIPGFLLGSFRNLKQLSL 356 (1237)
Q Consensus 277 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 356 (1237)
+..+++|++|+|++|.|+... .+..++.|+.|++++|.|+ .+.. +..+.+|+.+++
T Consensus 114 ------------------l~~~~~L~~L~ls~N~I~~i~---~l~~l~~L~~L~l~~N~i~-~~~~--~~~l~~L~~l~l 169 (414)
T KOG0531|consen 114 ------------------LSSLVNLQVLDLSFNKITKLE---GLSTLTLLKELNLSGNLIS-DISG--LESLKSLKLLDL 169 (414)
T ss_pred ------------------hhhhhcchheecccccccccc---chhhccchhhheeccCcch-hccC--CccchhhhcccC
Confidence 233444444444444443322 2333444555555555554 2222 233455555555
Q ss_pred CCCcCCCCCchhHhhhcCCCcEEEcccCcCCCCCCcCcccccccceeeccCccccCcccchhccccc--cceEEeccCCC
Q 000889 357 AHNQFAGEIPPELGQACGTLRELDLSSNRLTGELPSTFASCSSLHSLNLGSNMLSGNFLNTVVSKIS--SLIYLYVPFNN 434 (1237)
Q Consensus 357 ~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~--~L~~L~L~~N~ 434 (1237)
++|++. .+.......+.+++.+++..|.+... ..+..+..+..+++..|.++... ....+. .|+.+++++|.
T Consensus 170 ~~n~i~-~ie~~~~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~---~l~~~~~~~L~~l~l~~n~ 243 (414)
T KOG0531|consen 170 SYNRIV-DIENDELSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLE---GLNELVMLHLRELYLSGNR 243 (414)
T ss_pred Ccchhh-hhhhhhhhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccceecc---CcccchhHHHHHHhcccCc
Confidence 555554 33321012234555555555555421 22333334444455555544210 111111 24555555555
Q ss_pred CCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecccCceeeec---cccc-ccccccccEecccCCcc
Q 000889 435 ISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVLPNNYLSGT---VPLE-LGSCKNLKTIDLSFNSL 510 (1237)
Q Consensus 435 i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~-l~~l~~L~~L~Ls~N~l 510 (1237)
+... +..+..+.++..|++.+|++...- .....+.+..+....|.+... .... ......++.+.+..|.+
T Consensus 244 i~~~-~~~~~~~~~l~~l~~~~n~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (414)
T KOG0531|consen 244 ISRS-PEGLENLKNLPVLDLSSNRISNLE-----GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPI 317 (414)
T ss_pred cccc-cccccccccccccchhhccccccc-----cccccchHHHhccCcchhcchhhhhccccccccccccccccccCcc
Confidence 5422 244555666666677666665221 123344455555555544311 1111 33344455555555554
Q ss_pred c
Q 000889 511 A 511 (1237)
Q Consensus 511 ~ 511 (1237)
.
T Consensus 318 ~ 318 (414)
T KOG0531|consen 318 R 318 (414)
T ss_pred c
Confidence 4
No 486
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.85 E-value=1.2e-09 Score=83.50 Aligned_cols=41 Identities=44% Similarity=1.023 Sum_probs=30.3
Q ss_pred chhHHHHHHhhccccCCCCCCCcccccCCC-CCCceeeeeecC
Q 000889 57 NEELTILMAFKQSSIGSDPNGYLANWTADA-LTPCSWQGVSCS 98 (1237)
Q Consensus 57 ~~~~~aLl~~k~~~~~~~~~~~l~sW~~~~-~~~c~W~gv~c~ 98 (1237)
++|++||++||+++ ..||.+.+++|+... .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l-~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSL-NNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCT-T-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhc-ccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57999999999974 446789999999864 799999999996
No 487
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.83 E-value=3.7e-10 Score=118.04 Aligned_cols=181 Identities=24% Similarity=0.239 Sum_probs=82.4
Q ss_pred ccEEEcCCCCCCCchhhhccccCCCCCCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchhhhhccCCCccEE
Q 000889 200 LLQLDLSGNQISDSALLTYSLSNCQNLNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPASFVADSSGSLKYL 279 (1237)
Q Consensus 200 L~~L~Ls~N~i~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L 279 (1237)
|++||||+-.|+-..+. ..++.|.+|+.|.|.++++.+.+...++...+|+.|||+.+.=-+......+...++.|.+|
T Consensus 187 lq~lDLS~s~it~stl~-~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLH-GILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hHHhhcchhheeHHHHH-HHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 44555555444432221 22445555555555555555555555555555555555554422233333344445555555
Q ss_pred eCCCCcCCCCcccccccC-CCCCceeeccCcc--ccCcccchhhcccccceEEEecCCc-cCCCCchhhhccCCCCcEEe
Q 000889 280 DLSHNNFTGKFSNLDFGR-CGNLSVITLSQNG--LSGTEFPASLKNCQLLETLNMSHNA-LQGGIPGFLLGSFRNLKQLS 355 (1237)
Q Consensus 280 ~Ls~N~l~~~~~~~~~~~-l~~L~~L~L~~n~--l~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~~L~~L~ 355 (1237)
+|++|.++.......... -++|+.|+|++++ +....+......+++|.+||||+|. ++... ...+-.++.|++|.
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~-~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDC-FQEFFKFNYLQHLS 344 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchH-HHHHHhcchheeee
Confidence 555554443221111111 2345555555542 2212223334556666666666654 33221 12234556666666
Q ss_pred cCCCcCCCCCchhHh--hhcCCCcEEEcccC
Q 000889 356 LAHNQFAGEIPPELG--QACGTLRELDLSSN 384 (1237)
Q Consensus 356 L~~n~l~~~ip~~~~--~~l~~L~~L~Ls~N 384 (1237)
|+.|.. .+|..+. ...|.|.+||..++
T Consensus 345 lsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 666542 2333321 12255666665544
No 488
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.81 E-value=2.9e-10 Score=118.90 Aligned_cols=206 Identities=17% Similarity=0.132 Sum_probs=132.0
Q ss_pred ceeEEecCCCCCCCccccccccCC-CCCCeEEccCCCCCcccchhhhhcCcccceecccCCcccCCcccccccccCCccc
Q 000889 102 HVTSLNLNNSGLSGSLNLTTLTAL-PYLEHLNLQGNSFSAGDLSTSKTSSCSLVTMDLSSNNITGSLPGRSFLLSCDRLS 180 (1237)
Q Consensus 102 ~v~~L~L~~~~l~~~~~~~~l~~l-~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~g~~~~~~~l~~~~~L~ 180 (1237)
.|..+.|...-...+-.+..+..+ +.||+||||.-.|+...+..++..|++|+.|.|.++++.+.+. ..++...+|+
T Consensus 160 gV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~--~~iAkN~~L~ 237 (419)
T KOG2120|consen 160 GVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIV--NTIAKNSNLV 237 (419)
T ss_pred CeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHH--HHHhccccce
Confidence 366666654433333222223322 2588888888888777777778888888888888888766544 4455677888
Q ss_pred eEEccCC-ccCCCc----cccCCcccEEEcCCCCCCCchhhhccccCCCCCCEEEccCCCC---CchhhhhcccCCCccE
Q 000889 181 YVNLSHN-SISGGS----LHIGPSLLQLDLSGNQISDSALLTYSLSNCQNLNLLNFSDNKL---PGKLNATSVNCKSIST 252 (1237)
Q Consensus 181 ~L~ls~n-~l~~~~----~~~~~~L~~L~Ls~N~i~~~~~~~~~l~~l~~L~~L~Ls~n~l---~~~~~~~~~~~~~L~~ 252 (1237)
.|+++.| .+|..+ +..+..|.+|+|++|.+....+....-.--.+|+.|+|++++= ...+......|++|.+
T Consensus 238 ~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~ 317 (419)
T KOG2120|consen 238 RLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVH 317 (419)
T ss_pred eeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceee
Confidence 8888876 666533 5566778888888887665443222223346788888887742 1234445568888888
Q ss_pred EEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCCCceeeccCcc
Q 000889 253 IDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVITLSQNG 310 (1237)
Q Consensus 253 LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~ 310 (1237)
||||+|..... .........+.|++|.|+.|..-..-.-..|...|.|.+|+..++-
T Consensus 318 LDLSD~v~l~~-~~~~~~~kf~~L~~lSlsRCY~i~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 318 LDLSDSVMLKN-DCFQEFFKFNYLQHLSLSRCYDIIPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred eccccccccCc-hHHHHHHhcchheeeehhhhcCCChHHeeeeccCcceEEEEecccc
Confidence 88888764322 1112223467888888888854322223457888999999988773
No 489
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.72 E-value=7.6e-09 Score=108.40 Aligned_cols=208 Identities=22% Similarity=0.206 Sum_probs=124.9
Q ss_pred cCCCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCCCceeeccCccccCcccchhhccccc
Q 000889 246 NCKSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVITLSQNGLSGTEFPASLKNCQL 325 (1237)
Q Consensus 246 ~~~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~ 325 (1237)
.++.++.|||.+|.++.......+...++.|+.|+|++|.+...+.... ....+|++|.|.+..+........+..++.
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp-~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~ 147 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLP-LPLKNLRVLVLNGTGLSWTQSTSSLDDLPK 147 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCc-ccccceEEEEEcCCCCChhhhhhhhhcchh
Confidence 4556666777777776543344445667777777777777765444322 456788888888888876666677888999
Q ss_pred ceEEEecCCccCCC-Cchhhh-ccCCCCcEEecCCCcCCCC-CchhHhhhcCCCcEEEcccCcCCCC-CCcCcccccccc
Q 000889 326 LETLNMSHNALQGG-IPGFLL-GSFRNLKQLSLAHNQFAGE-IPPELGQACGTLRELDLSSNRLTGE-LPSTFASCSSLH 401 (1237)
Q Consensus 326 L~~L~Ls~N~l~~~-~~~~~~-~~l~~L~~L~L~~n~l~~~-ip~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~ 401 (1237)
+++|.+|.|.+.-. +..... ..-+.+++|++..|...-- --..+.+.++++..+-+..|.+... ....+..++.+-
T Consensus 148 vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~ 227 (418)
T KOG2982|consen 148 VTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLS 227 (418)
T ss_pred hhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcch
Confidence 99999998843210 000000 1122455555555432200 0012334457778888888877543 234555666777
Q ss_pred eeeccCccccCcccchhccccccceEEeccCCCCCCCCCc------cCCCCCCCcEEEc
Q 000889 402 SLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPL------SLTNCTQLRVLDL 454 (1237)
Q Consensus 402 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~------~l~~l~~L~~L~L 454 (1237)
-|+|+.|+|......+.+.++++|..|.+++|.+...+.. -++.++++++|+=
T Consensus 228 ~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNG 286 (418)
T KOG2982|consen 228 CLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNG 286 (418)
T ss_pred hhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEecC
Confidence 7888888876655556666777777777777777644322 1345555555543
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.68 E-value=1.5e-08 Score=84.69 Aligned_cols=60 Identities=43% Similarity=0.643 Sum_probs=36.0
Q ss_pred ceeEEEccCCcCCccCCccccCCCCCcEEEecCcccccccccccccccCCcEEeCCCCcc
Q 000889 712 SLIYLDLSYNSLSGTLPENFGSLNYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNF 771 (1237)
Q Consensus 712 ~L~~LdLs~N~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l 771 (1237)
+|++|+|++|+++...+..|.++++|++|++++|+++...|..|.++++|+.|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666644445566666666666666666655555666666666666666654
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.68 E-value=1.4e-08 Score=84.93 Aligned_cols=61 Identities=46% Similarity=0.619 Sum_probs=56.6
Q ss_pred CCCcEEEecCcccccccccccccccCCcEEeCCCCccCCCCCCcccCcccccceecccccc
Q 000889 735 NYLQVLNLGHNKLTGHIPDSFGGLKAIGVLDLSHNNFQGSIPGSLGGLSFLSDLDVSNNNL 795 (1237)
Q Consensus 735 ~~L~~L~Ls~N~l~~~~P~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l 795 (1237)
++|++|++++|+++...+..|.++++|++||+++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4789999999999966668999999999999999999988888999999999999999986
No 492
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.65 E-value=5.4e-07 Score=102.18 Aligned_cols=171 Identities=21% Similarity=0.265 Sum_probs=128.0
Q ss_pred CeEEEEEEEC-CCCEEEEEEeccccCcCHHHHHHHHHHHHhcCCCCcccccceEEe----CCeEEEEEEeccCC-CHHHH
Q 000889 941 FGEVYKAQLR-DGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKI----GEERLLVYEYMKWG-SLESV 1014 (1237)
Q Consensus 941 fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~g-sL~~~ 1014 (1237)
-.+.|++... +|..|++|++..........-..-+++.+++.|+|||++.+++.. +...++||+|.++. +|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 3678999765 789999999843333333233456788999999999999998863 34678999999864 67765
Q ss_pred Hhhhhc----------CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeecccceeecc
Q 000889 1015 LHDRAK----------GGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNA 1084 (1237)
Q Consensus 1015 l~~~~~----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~~~~ 1084 (1237)
-..... ..+...++...|.++.|++.||.++|+. |..-+-+.+.+|+++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 533221 1234568889999999999999999999 999999999999999999999988777765543
Q ss_pred CCcceeeeccccCCCcCCccccCccccCcccchHHHHHHHHHHHcCCCC
Q 000889 1085 LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRP 1133 (1237)
Q Consensus 1085 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~tg~~p 1133 (1237)
... |-+.+ -.+-|.=.+|.++..+.+|..-
T Consensus 446 d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT----------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC----------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 220 11211 2346888999999999999543
No 493
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.65 E-value=4.6e-07 Score=99.87 Aligned_cols=141 Identities=16% Similarity=0.095 Sum_probs=101.2
Q ss_pred ceecccCCeEEEEEEECCCCEEEEEEeccccC-----------cCHHHHHHHHHHHHhcCCC--CcccccceEEe-----
Q 000889 934 SMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTG-----------QGDREFMAEMETIGKIKHR--NLVPLLGYCKI----- 995 (1237)
Q Consensus 934 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~----- 995 (1237)
+.+-+.....|++++. +|+.+.||+...... .....+.+|++.+.++... .+++++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444455777766 477899997643210 1112477899999888533 34455556543
Q ss_pred CCeEEEEEEeccCC-CHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCC-------
Q 000889 996 GEERLLVYEYMKWG-SLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDE------- 1067 (1237)
Q Consensus 996 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~------- 1067 (1237)
....++|||++++. +|.+++..... .+.+......++.++++.+.-||.. ||+|+|++++|||++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~---~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT---NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCC
Confidence 23578999999976 89999864321 2445667778999999999999999 9999999999999975
Q ss_pred CCceEEeeccccee
Q 000889 1068 NFEARVSDFGMARL 1081 (1237)
Q Consensus 1068 ~~~vkl~DfGla~~ 1081 (1237)
++.+.++||+.++.
T Consensus 181 ~~~~~LIDl~r~~~ 194 (268)
T PRK15123 181 DLKLSVIDLHRAQI 194 (268)
T ss_pred CceEEEEECCcccc
Confidence 46899999998853
No 494
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.64 E-value=2.9e-08 Score=125.83 Aligned_cols=291 Identities=25% Similarity=0.279 Sum_probs=136.3
Q ss_pred ccceEEEecCCccCCCCchhhhccCCCCcEEecCCCc--CCCCCchhHhhhcCCCcEEEcccCcCCCCCCcCcccccccc
Q 000889 324 QLLETLNMSHNALQGGIPGFLLGSFRNLKQLSLAHNQ--FAGEIPPELGQACGTLRELDLSSNRLTGELPSTFASCSSLH 401 (1237)
Q Consensus 324 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~--l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 401 (1237)
...+...+-+|.+. .++.. ...++|++|-+..|. +. .++..+|..++.|+.|||++|.=-+.+|..++.+-+|+
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~--~~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGS--SENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred hheeEEEEeccchh-hccCC--CCCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 34455555555443 22221 123345555555554 33 45555555555566666655544445555555555666
Q ss_pred eeeccCccccCcccchhccccccceEEeccCCCCCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCcccceecc
Q 000889 402 SLNLGSNMLSGNFLNTVVSKISSLIYLYVPFNNISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFPALEKIVL 481 (1237)
Q Consensus 402 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~L 481 (1237)
.|+|++..++ ..+..+..+..|.+|++.++.-...+|.....|++|++|.+..-... .....+..+.++.+|+.+..
T Consensus 599 yL~L~~t~I~--~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~-~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 599 YLDLSDTGIS--HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALS-NDKLLLKELENLEHLENLSI 675 (889)
T ss_pred cccccCCCcc--ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccc-cchhhHHhhhcccchhhhee
Confidence 6666555554 23444555555555555555544444555555666666666554311 00111111223334444433
Q ss_pred cCceeeeccccccccccccc----EecccCCccccCCCccccCCcCcceeecccccccCccccccccc------CCCccE
Q 000889 482 PNNYLSGTVPLELGSCKNLK----TIDLSFNSLAGPVPSEIWSLPNLSDLVMWANNLTGEIPEGICVN------GGNLET 551 (1237)
Q Consensus 482 ~~N~l~~~~~~~l~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~------l~~L~~ 551 (1237)
..... .+-..+..+..|. .+.+.++... ..+..++.+.+|+.|.+.++.+. ++....+.. ++++..
T Consensus 676 ~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~-e~~~~~~~~~~~~~~f~~l~~ 751 (889)
T KOG4658|consen 676 TISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGIS-EIVIEWEESLIVLLCFPNLSK 751 (889)
T ss_pred ecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCc-hhhcccccccchhhhHHHHHH
Confidence 22222 0111122222222 2333333333 45556677777777777777765 221111110 111222
Q ss_pred EEccccccccccccccccCCCccEEEeecccccccCCccccCccccceEEecCCccccC-CCCCCCCCCCCCEEEC
Q 000889 552 LILNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGEIPAGIGNLVKLAILQLGNNSLTGQ-VPQGLGKCRSLVWLDL 626 (1237)
Q Consensus 552 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L 626 (1237)
+...++..- ..+.+.--.++|+.|.+..+.....+.+....+..+..+.+..+.+.+. .-...+.++++..+.+
T Consensus 752 ~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 752 VSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPL 826 (889)
T ss_pred HHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEeccc
Confidence 212221111 1222223346777777777776655666666666666666666666654 2333444444444433
No 495
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.63 E-value=1.5e-07 Score=99.44 Aligned_cols=134 Identities=21% Similarity=0.198 Sum_probs=96.9
Q ss_pred CCCCceecccCCeEEEEEEECCCCEEEEEEecc----------ccCc------------CHHHHHHHHHHHHhcCCC--C
Q 000889 930 FSADSMIGSGGFGEVYKAQLRDGSVVAIKKLIH----------VTGQ------------GDREFMAEMETIGKIKHR--N 985 (1237)
Q Consensus 930 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~----------~~~~------------~~~~~~~E~~~l~~l~h~--n 985 (1237)
+.+...||.|--+.||.|....|.++|+|.=.. .... ......+|+++|+++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456688999999999999999999999993210 0000 012356799999999755 7
Q ss_pred cccccceEEeCCeEEEEEEeccCCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 000889 986 LVPLLGYCKIGEERLLVYEYMKWGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLL 1065 (1237)
Q Consensus 986 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll 1065 (1237)
|++.+++ +...+||||++|-.|...- ++......++..|++-+.-+-.. ||||+|+.+-||++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV 235 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILV 235 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEE
Confidence 8888765 5678999999987765432 12222333444444444444466 99999999999999
Q ss_pred CCCCceEEeecccce
Q 000889 1066 DENFEARVSDFGMAR 1080 (1237)
Q Consensus 1066 ~~~~~vkl~DfGla~ 1080 (1237)
+++|.+.++||--+.
T Consensus 236 ~~dg~~~vIDwPQ~v 250 (304)
T COG0478 236 TEDGDIVVIDWPQAV 250 (304)
T ss_pred ecCCCEEEEeCcccc
Confidence 999999999997664
No 496
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.61 E-value=2e-06 Score=95.05 Aligned_cols=265 Identities=14% Similarity=0.148 Sum_probs=153.0
Q ss_pred CCceecccCCeEEEEEEECCCCEEEEEEeccccCcCHHHHHHHHHHHHhc-CCCCcccccce------EEeC-CeEEEEE
Q 000889 932 ADSMIGSGGFGEVYKAQLRDGSVVAIKKLIHVTGQGDREFMAEMETIGKI-KHRNLVPLLGY------CKIG-EERLLVY 1003 (1237)
Q Consensus 932 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~------~~~~-~~~~lv~ 1003 (1237)
..+.||+|+-+.+|-.--- +. .+.|+..........+ .+..|... .||-+-.-+.+ ...+ ....+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecchh-hc-hhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 3457999999999965321 22 2344443222221222 12222222 45543321111 1112 2356788
Q ss_pred EeccCCC-HHHHHhhh-hcCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeeCCCCceEEeeccccee
Q 000889 1004 EYMKWGS-LESVLHDR-AKGGGTKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1081 (1237)
Q Consensus 1004 e~~~~gs-L~~~l~~~-~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDikp~NIll~~~~~vkl~DfGla~~ 1081 (1237)
..+.|.. ...+..-. ++..-....|....+++..+|.+.+.||.. |.+-+|+.++|+|+++++.|.+.|=..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceee
Confidence 8877652 23333211 111224568999999999999999999999 999999999999999999999998654433
Q ss_pred eccCCcceeeeccccCCCcCCccccC-----ccccCcccchHHHHHHHHHHHcC-CCCCCCCCCCCCc--hHH-HHHHHH
Q 000889 1082 VNALDTHLSVSTLAGTPGYVPPEYYQ-----SFRCTTKGDVYSYGVILLELLSG-KRPIDPSEFGDDN--NLV-GWAKQL 1152 (1237)
Q Consensus 1082 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGv~l~el~tg-~~p~~~~~~~~~~--~~~-~~~~~~ 1152 (1237)
.. ........+|...|.+||... +...+...|.|.+||++++++.| +.||.+-....+. .+. ......
T Consensus 167 ~~---ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 167 NA---NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred cc---CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 32 222334567899999999764 34456779999999999999886 9999864322211 111 000000
Q ss_pred hhh--cccccccCccccCCCCCHHHHHHHHHHHHhcccc--CCCCCCCHHHHHHHHHhccc
Q 000889 1153 HRE--KRINEILDPELTMQTSDETELYQYLRISFECLDD--RPFKRPTMIQVMAMFKELQV 1209 (1237)
Q Consensus 1153 ~~~--~~~~~~~~~~l~~~~~~~~~~~~l~~li~~cl~~--dP~~RPt~~ell~~L~~l~~ 1209 (1237)
... +.-.....+ +.......-...+.-+..+|+.. .+.-|||++..+..|..+..
T Consensus 244 f~ya~~~~~g~~p~--P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 244 FAYASDQRRGLKPP--PRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred eeechhccCCCCCC--CCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 000 000000011 11111111122344455578854 36789999988887766543
No 497
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.61 E-value=2e-07 Score=96.66 Aligned_cols=126 Identities=22% Similarity=0.268 Sum_probs=82.2
Q ss_pred EEEEEEECCCCEEEEEEecccc-------------Cc--------C-----HHHHHHHHHHHHhcCCC--CcccccceEE
Q 000889 943 EVYKAQLRDGSVVAIKKLIHVT-------------GQ--------G-----DREFMAEMETIGKIKHR--NLVPLLGYCK 994 (1237)
Q Consensus 943 ~Vy~~~~~~~~~vavK~~~~~~-------------~~--------~-----~~~~~~E~~~l~~l~h~--niv~l~~~~~ 994 (1237)
.||.|...+|..+|+|...... .. . .....+|++.|.++..- ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 3899999889999999764210 00 0 01256799999999755 567776542
Q ss_pred eCCeEEEEEEecc--CCCHHHHHhhhhcCCCCccCHHHHHHHHHHHHHHHHH-HHhcCCCCeeecCCCCCCeeeCCCCce
Q 000889 995 IGEERLLVYEYMK--WGSLESVLHDRAKGGGTKLDWAARKKIAIGSARGLAF-LHHSCIPHIIHRDMKSSNVLLDENFEA 1071 (1237)
Q Consensus 995 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~y-LH~~~~~~ivHrDikp~NIll~~~~~v 1071 (1237)
..++||||++ |..+..+.... ++......++.+++..+.. +|.. |+||+|+.+.||+++++ .+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eE
Confidence 4579999999 66665543321 1123345667777775555 4677 99999999999999988 89
Q ss_pred EEeecccceeec
Q 000889 1072 RVSDFGMARLVN 1083 (1237)
Q Consensus 1072 kl~DfGla~~~~ 1083 (1237)
.++|||.+....
T Consensus 146 ~iIDf~qav~~~ 157 (188)
T PF01163_consen 146 YIIDFGQAVDSS 157 (188)
T ss_dssp EE--GTTEEETT
T ss_pred EEEecCcceecC
Confidence 999999886543
No 498
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.56 E-value=3e-08 Score=104.09 Aligned_cols=244 Identities=19% Similarity=0.178 Sum_probs=127.7
Q ss_pred CCceeeeeecCCCCceeEEecCCCCCCCccc-cccccCCCCCCeEEccCCCCCccc-chhhhhcCcccceecccCCcccC
Q 000889 88 TPCSWQGVSCSLNSHVTSLNLNNSGLSGSLN-LTTLTALPYLEHLNLQGNSFSAGD-LSTSKTSSCSLVTMDLSSNNITG 165 (1237)
Q Consensus 88 ~~c~W~gv~c~~~~~v~~L~L~~~~l~~~~~-~~~l~~l~~L~~L~Ls~n~l~~~~-~~~~~~~~~~L~~L~Ls~n~l~g 165 (1237)
..|...||.-- +...-|.|+++.+-.... ...-..+++++.|||.+|.|++.. +..++..++.|+.|+|+.|.+..
T Consensus 34 ~g~s~~~v~s~--ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s 111 (418)
T KOG2982|consen 34 AGLSYLGVSSL--RALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSS 111 (418)
T ss_pred cccceeeeccc--cchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCC
Confidence 34566666432 223344455555533322 223345667788888888887643 45567777777777777777753
Q ss_pred CcccccccccCCccceEEccCCccCCCccccCCcccEEEcCCCCCCCchhhhccccCCCCCCEEEccCCCCCch--hhhh
Q 000889 166 SLPGRSFLLSCDRLSYVNLSHNSISGGSLHIGPSLLQLDLSGNQISDSALLTYSLSNCQNLNLLNFSDNKLPGK--LNAT 243 (1237)
Q Consensus 166 ~~~~~~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~--~~~~ 243 (1237)
.|--. -....+|+.|-|.+.++.... ....+..++.++.|.+|.|.+.-. ....
T Consensus 112 ~I~~l--p~p~~nl~~lVLNgT~L~w~~----------------------~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c 167 (418)
T KOG2982|consen 112 DIKSL--PLPLKNLRVLVLNGTGLSWTQ----------------------STSSLDDLPKVTELHMSDNSLRQLNLDDNC 167 (418)
T ss_pred ccccC--cccccceEEEEEcCCCCChhh----------------------hhhhhhcchhhhhhhhccchhhhhcccccc
Confidence 32210 023446666666665554311 111233444444444444422100 0000
Q ss_pred cccC-CCccEEEcccccccCccchhhhhccCCCccEEeCCCCcCCCCcccccccCCCCCceeeccCccccCcccchhhcc
Q 000889 244 SVNC-KSISTIDLSYNLLSGEIPASFVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVITLSQNGLSGTEFPASLKN 322 (1237)
Q Consensus 244 ~~~~-~~L~~LdLs~N~l~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~ 322 (1237)
.... +.+++|++..|...--....-.....+++..+.+..|.+.+......+..++.+..|+|+.|+|....--..+.+
T Consensus 168 ~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~ 247 (418)
T KOG2982|consen 168 IEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNG 247 (418)
T ss_pred ccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcC
Confidence 0101 123333333333221111111123345677777777777655555566677777788888888755444456777
Q ss_pred cccceEEEecCCccCCCCch-----hhhccCCCCcEEecC
Q 000889 323 CQLLETLNMSHNALQGGIPG-----FLLGSFRNLKQLSLA 357 (1237)
Q Consensus 323 l~~L~~L~Ls~N~l~~~~~~-----~~~~~l~~L~~L~L~ 357 (1237)
+++|..|.+++|.+.+.+.. .+++.+++++.|+=+
T Consensus 248 f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNGs 287 (418)
T KOG2982|consen 248 FPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNGS 287 (418)
T ss_pred CchhheeeccCCcccccccCCcceEEEEeeccceEEecCc
Confidence 78888888888877654322 134566666666543
No 499
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.54 E-value=1e-07 Score=121.05 Aligned_cols=271 Identities=23% Similarity=0.254 Sum_probs=130.2
Q ss_pred cceEEEecCCc--cCCCCchhhhccCCCCcEEecCCCcCCCCCchhHhhhcCCCcEEEcccCcCCCCCCcCcccccccce
Q 000889 325 LLETLNMSHNA--LQGGIPGFLLGSFRNLKQLSLAHNQFAGEIPPELGQACGTLRELDLSSNRLTGELPSTFASCSSLHS 402 (1237)
Q Consensus 325 ~L~~L~Ls~N~--l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 402 (1237)
+|+.|-+..|. +. .++..+|..++.|+.|||++|.=-+.+|..++.. -+|++|+|++..+. .+|..+.++..|.+
T Consensus 546 ~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~L-i~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGEL-VHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred ccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhh-hhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 45555555554 22 3444445555555555555554333555555543 45555555555555 45555555555555
Q ss_pred eeccCccccCcccchhccccccceEEeccCCC--CCCCCCccCCCCCCCcEEEccCCcCcccCCCCCCCCCCCc-cccee
Q 000889 403 LNLGSNMLSGNFLNTVVSKISSLIYLYVPFNN--ISGPVPLSLTNCTQLRVLDLSSNGFTGTIPSGFCSPPNFP-ALEKI 479 (1237)
Q Consensus 403 L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~--i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~-~L~~L 479 (1237)
|++..+.-... .+.....+++|++|.+..-. .+...-..+.++.+|+.+........ +-..+.....+. ..+.+
T Consensus 623 Lnl~~~~~l~~-~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~--~~e~l~~~~~L~~~~~~l 699 (889)
T KOG4658|consen 623 LNLEVTGRLES-IPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVL--LLEDLLGMTRLRSLLQSL 699 (889)
T ss_pred ecccccccccc-ccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhH--hHhhhhhhHHHHHHhHhh
Confidence 55555432211 13344445555555554432 11122233344455555544333220 000110001111 11222
Q ss_pred cccCceeeecccccccccccccEecccCCccccCCCccccC------CcCcceeecccccccCcccccccccCCCccEEE
Q 000889 480 VLPNNYLSGTVPLELGSCKNLKTIDLSFNSLAGPVPSEIWS------LPNLSDLVMWANNLTGEIPEGICVNGGNLETLI 553 (1237)
Q Consensus 480 ~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 553 (1237)
.+.++... ..+..+..+.+|+.|.+.++.+.......... ++++..+...++.....+... .-.++|+.|+
T Consensus 700 ~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~--~f~~~L~~l~ 776 (889)
T KOG4658|consen 700 SIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLRDLTWL--LFAPHLTSLS 776 (889)
T ss_pred hhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccccccchh--hccCcccEEE
Confidence 22222222 34556667777788877777765332222221 222222222222211111111 2346899999
Q ss_pred ccccccccccccccccCCCccEEEeeccccccc-CCccccCccccceEEecC
Q 000889 554 LNNNHLTGAIPKSIASCTNMLWVSLSSNQLTGE-IPAGIGNLVKLAILQLGN 604 (1237)
Q Consensus 554 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~L~~L~~L~L~~ 604 (1237)
+..+.....+......+..+..+-+..+.+.+. .-.+.+.++++..+.+..
T Consensus 777 l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~ 828 (889)
T KOG4658|consen 777 LVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSF 828 (889)
T ss_pred EecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCc
Confidence 998887766666666777777777777777755 334455555555554443
No 500
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.53 E-value=2.9e-09 Score=123.52 Aligned_cols=178 Identities=24% Similarity=0.247 Sum_probs=90.3
Q ss_pred ccccCCCCCCeEEccCCCCCc-ccchhhhhcCcccceecccCCc--c----c---CCcccccccccCCccceEEccCCcc
Q 000889 120 TTLTALPYLEHLNLQGNSFSA-GDLSTSKTSSCSLVTMDLSSNN--I----T---GSLPGRSFLLSCDRLSYVNLSHNSI 189 (1237)
Q Consensus 120 ~~l~~l~~L~~L~Ls~n~l~~-~~~~~~~~~~~~L~~L~Ls~n~--l----~---g~~~~~~~l~~~~~L~~L~ls~n~l 189 (1237)
-.+..++.|+.|.|.+|.++. .++..+. .+|++|..++-- + + |++.- .-.-..|...+++.|.+
T Consensus 103 i~ifpF~sLr~LElrg~~L~~~~GL~~lr---~qLe~LIC~~Sl~Al~~v~ascggd~~n---s~~Wn~L~~a~fsyN~L 176 (1096)
T KOG1859|consen 103 ISIFPFRSLRVLELRGCDLSTAKGLQELR---HQLEKLICHNSLDALRHVFASCGGDISN---SPVWNKLATASFSYNRL 176 (1096)
T ss_pred ceeccccceeeEEecCcchhhhhhhHHHH---HhhhhhhhhccHHHHHHHHHHhcccccc---chhhhhHhhhhcchhhH
Confidence 346677888999999988854 2222222 344555444320 0 0 11110 00122566666666666
Q ss_pred CC--CccccCCcccEEEcCCCCCCCchhhhccccCCCCCCEEEccCCCCCchhhhhcccCCCccEEEcccccccCccchh
Q 000889 190 SG--GSLHIGPSLLQLDLSGNQISDSALLTYSLSNCQNLNLLNFSDNKLPGKLNATSVNCKSISTIDLSYNLLSGEIPAS 267 (1237)
Q Consensus 190 ~~--~~~~~~~~L~~L~Ls~N~i~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~ 267 (1237)
+. ..+...+.|+.|||++|++++.. .+..|+.|++|||++|++..+..-...+|+ |..|.|++|.++...
T Consensus 177 ~~mD~SLqll~ale~LnLshNk~~~v~----~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~--- 248 (1096)
T KOG1859|consen 177 VLMDESLQLLPALESLNLSHNKFTKVD----NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR--- 248 (1096)
T ss_pred HhHHHHHHHHHHhhhhccchhhhhhhH----HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhh---
Confidence 53 44555566666666666665532 345556666666666655444333333343 444444444444211
Q ss_pred hhhccCCCccEEeCCCCcCCCCcccccccCCCCCceeeccCccccCcccchhhcccccceEEEecCCccC
Q 000889 268 FVADSSGSLKYLDLSHNNFTGKFSNLDFGRCGNLSVITLSQNGLSGTEFPASLKNCQLLETLNMSHNALQ 337 (1237)
Q Consensus 268 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~N~l~ 337 (1237)
.+.++.+|+.|||++|-|.+..--..+..+..|+.|.|.+|.+-
T Consensus 249 --------------------------gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 249 --------------------------GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred --------------------------hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 23445555555555555544332334455556666666666554
Done!