BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000890
(1237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31828|PQQL_ECOLI Probable zinc protease PqqL OS=Escherichia coli (strain K12)
GN=pqqL PE=3 SV=2
Length = 931
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 14/215 (6%)
Query: 175 FLNAELPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIE 234
+ A LP KL GQL NGLRY+I P+ P + ++IH GS+ EED+E G+AH +E
Sbjct: 24 LIAAALPQDEKLITGQLDNGLRYMIYPHAHPKDQVNLWLQIHTGSLQEEDNELGVAHFVE 83
Query: 235 HVAFLGSKKR--EKLLGT--------GARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLV 284
H+ F G+K K++ T G NAYT + TV+ + PT K + L V
Sbjct: 84 HMMFNGTKTWPGNKVIETFESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQN----LQQV 139
Query: 285 LDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIG 344
+ +E + F V+ ER I E + ++R L + + R PIG
Sbjct: 140 MAIFSEWSNAATFEKLEVDAERGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIG 199
Query: 345 LEEQIKKWDADKIRKFHERWYFPANATLYIVGDID 379
L + + ++R+F++RWY P N T +VGDID
Sbjct: 200 LMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDID 234
Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 96/231 (41%), Gaps = 15/231 (6%)
Query: 719 PELNVTKVHDKESGITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVI 778
P+ ++ +T L LSNG + S E Q + + G + ++ + +
Sbjct: 507 PQAEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQIIAVSNKGDLSFPAQQKSLIA 566
Query: 779 VGVRTLSEGGRVGKFSREQVELFCVNHLINCSLESTEEFIAMEFRFTLRDNGMRAAFQLL 838
+ + +S G VG+ S ++ + + + ++ S + + R N FQL+
Sbjct: 567 LANKAVSGSG-VGELSSSSLKRWSAEN--SVTMSSKVSGMNTLLSVSARTNNPEPGFQLI 623
Query: 839 HMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDERFVEPTPKSLE 898
+ + HS D+ + + + K+L++ A K M + R+ + K L+
Sbjct: 624 NQRITHSTINDNIWASLQNAQIQAL----KTLDQRPAEKFAQQMY--ETRYADDRTKLLQ 677
Query: 899 NLNLKSVKEA----VMNQFVGNNMEVS--IVGDFSEEEIESCILDYLGTVR 943
+ A Q + +++ IVG+ +E+++ + I YLG+++
Sbjct: 678 ENQIAQFTAADALAADRQLFSSPADITFVIVGNVAEDKLVALITRYLGSIK 728
>sp|P45181|PQQL_HAEIN Probable zinc protease PqqL OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=pqqL PE=3 SV=1
Length = 926
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 14/213 (6%)
Query: 177 NAELPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHV 236
N LP P + G+L NGL+Y +L N P R + I+AGS+ E+DD++GIAH++EH+
Sbjct: 25 NNNLPFDPNIQHGKLSNGLQYFVLKNTEPKERVYIRLVINAGSMHEDDDQKGIAHLVEHM 84
Query: 237 AFLGSKKR---------EKLLGTGARS-NAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLD 286
AF GSKK EKL AR NA+TDF +TV+ ++ + +++ L L D
Sbjct: 85 AFNGSKKYPENQIINALEKLGMKFARDINAFTDFENTVYTLNLDS----NNQQKLELAFD 140
Query: 287 ALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLE 346
+NE + FL V+ ER + E + + R+ + + ++ R PIG
Sbjct: 141 VINEWMNNITFLPKDVDGERGVVQEEWRRRLSPMLRIGNKKSAIEMAGSRYVLRDPIGDM 200
Query: 347 EQIKKWDADKIRKFHERWYFPANATLYIVGDID 379
+ IK A ++ F+ +WY P N ++ IVGDID
Sbjct: 201 DIIKTISAKRVADFYHKWYRPDNMSVIIVGDID 233
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3
SV=1
Length = 459
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 188 RGQLRNGLRYLILPNKVPASRFEAH-MEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK 246
R L GLR I+ +P+ R + H GS DE G H +EH+ F G++KR
Sbjct: 37 RTTLPGGLR--IVTETLPSVRSATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKRSA 94
Query: 247 L------LGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSS 300
L G NA+T +T + Y + D D LPL +D + ++
Sbjct: 95 LDISSAIDAVGGEMNAFTAKEYTCY------YARVLDTD-LPLAIDVVCDMLTGSLIQEE 147
Query: 301 RVEKERRAILSELQMMNTIEYRVDC--QLLQHLHSENKLSKRFPIGLEEQIKKWDADKIR 358
V+ ER AIL E+ M T + DC L H + R +G + + AD+IR
Sbjct: 148 DVDVERGAILEEIAM--TEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIR 205
Query: 359 KFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETAS 403
+F+ + Y P + + G++D+ +K + Q+ A F +G + A+
Sbjct: 206 RFYRKHYDPTHLVVAAAGNVDH-NKVVRQVRAAFEKSGALKDPAA 249
>sp|Q5UPX9|YL233_MIMIV Putative zinc protease L233 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L233 PE=3 SV=1
Length = 440
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 21/227 (9%)
Query: 188 RGQLRNGLRYLILP--NKVPASRFEAHMEIHAGSIDEEDD-EQGIAHMIEHVAF--LGSK 242
R L+NGL+ + +P N +P ++ + GS +E + GI+H +EH+ F +K
Sbjct: 5 RKTLKNGLKLVFVPMNNDIPLVAMGFYVGV--GSRNEFGAYKNGISHFLEHMMFKRTTNK 62
Query: 243 KREKLLG----TGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFL 298
++L TGA NA T +T + + + + + +LD + +I HP F+
Sbjct: 63 SSDELFSELDSTGANYNAITTTQNTCYFL-------SGNSNYIDKLLDIMLDIFLHPNFV 115
Query: 299 SSRVEKERRAILSELQM-MNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKI 357
S +E+ER+ I+ E+++ + + + Q+ + LS++ IG E IK D + +
Sbjct: 116 SDDIERERKVIMEEMKIRADQPQSSMTYQIHEVYFKNTSLSQK-VIGSIESIKNIDKNDL 174
Query: 358 RKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASA 404
KF+ +Y P N + G+ D V D+I++ N N ++
Sbjct: 175 EKFYSTFYRPNNTIFIMAGNFD-VFSVYDKIKSNLEKLTNNNFCTTS 220
>sp|P37648|YHJJ_ECOLI Protein YhjJ OS=Escherichia coli (strain K12) GN=yhjJ PE=1 SV=1
Length = 498
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 180 LPSHPKLYRGQLRNGLRYLILPN-KVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAF 238
L P +G L NGL++ +L + P+ R E + ++ GS+ E + G +H I +A
Sbjct: 27 LQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIAL 86
Query: 239 -----LGSKKREKLLGTGARSN-----AYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDAL 288
L + + L G + T+F++ P D ++ L + +A
Sbjct: 87 TQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANAT 146
Query: 289 NEIAFHPKFLSSRVE-KERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEE 347
++ P+ ++ ++ ++ A YR+ L + L + P+
Sbjct: 147 GKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQ--PV---- 200
Query: 348 QIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTP 407
+A+KI+ F+++WY P TL +VG++D S +DQI FG + ET A P
Sbjct: 201 -----EAEKIKDFYQKWYTPDAMTLLVVGNVDARS-VVDQINKTFGELKGKRET-PAPVP 253
Query: 408 TSSAFGAMA 416
T S A A
Sbjct: 254 TLSPLRAEA 262
>sp|P55679|Y4WA_RHISN Uncharacterized zinc protease y4wA OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01040 PE=3 SV=1
Length = 512
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 191 LRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR------ 244
L NG+ +++P+ A + G+ DE + GIAH +EH+ F G+KK
Sbjct: 92 LGNGMEVVVIPDHR-APIVTQMIWYKVGNADEPPGKSGIAHFLEHLMFKGTKKHPSGEFS 150
Query: 245 EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEK 304
K+ G NA+T +T +H T T +S ++ D + H + +
Sbjct: 151 AKIAEIGGEENAFTGSDYTAYH---QTVTPESLRTMMEFEADRMR----HLVLTDAVIVP 203
Query: 305 ERRAILSELQMMNTIEYRVDCQLLQHLHSENKLS------KRFP-IGLEEQIKKWDADKI 357
ER IL E + +RV+ Q L E + + R P IG ++++ + +
Sbjct: 204 ERDVILEERR------WRVENDPEQLLEEEMQATLYQNHPYRIPTIGWMHEMEQLNREDA 257
Query: 358 RKFHERWYFPANATLYIVGDID 379
KF++R+Y P NA L + GD+D
Sbjct: 258 LKFYDRYYAPNNAILVVAGDVD 279
>sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta
OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2
Length = 531
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 24/240 (10%)
Query: 182 SHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGS 241
S P+ L NGLR N + A + I AGS E D+ G AH +EH+ F G+
Sbjct: 93 SAPETRVTTLPNGLRVATESN-LSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGT 151
Query: 242 KKR------EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHP 295
+R E++ G NAYT T + Y K D + + LD L +I +
Sbjct: 152 DRRTVRALEEEIEDIGGHLNAYTSREQTTY------YAKVLDSN-VNQALDVLADILQNS 204
Query: 296 KFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHS---ENKLSKRFPIGLEEQIKKW 352
KF R+ +ER IL E+Q +E + D +L HLH+ + R +G + +K
Sbjct: 205 KFEEQRINRERDVILREMQ---EVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSI 261
Query: 353 DADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETAS---ASTPTS 409
+ ++ + + Y + + G + + + ++Q++ +F ++ T S A+ P S
Sbjct: 262 TREDLQNYIKTHYTASRMVIAAAGAVKH-EEVVEQVKKLFTKLSSDPTTTSQLVANEPAS 320
>sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus
norvegicus GN=Pmpcb PE=1 SV=3
Length = 489
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 191 LRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREKL--- 247
L NGLR + S + I AGS E + G AH +EH+AF G+KKR +L
Sbjct: 63 LENGLR--VASENSGISTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLE 120
Query: 248 ---LGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEK 304
GA NAYT TV+ ++ ++KD LP ++ L +I + + +E+
Sbjct: 121 LEIENMGAHLNAYTSREQTVY--YAKAFSKD-----LPRAVEILADIIQNSTLGEAEIER 173
Query: 305 ERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIK 350
ER IL E+Q + T V L +N R +G E IK
Sbjct: 174 ERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIK 219
>sp|Q04805|YMXG_BACSU Uncharacterized zinc protease YmxG OS=Bacillus subtilis (strain
168) GN=ymxG PE=3 SV=3
Length = 409
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 18/213 (8%)
Query: 188 RGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR--- 244
R +NG+R ++L N + I GS E + GI+H +EH+ F G+ +
Sbjct: 4 RYTCQNGVR-IVLENNPTVRSVAIGVWIGTGSRHETPEINGISHFLEHMFFKGTSTKSAR 62
Query: 245 ---EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSR 301
E G + NA+T +T + Y K DE LD L ++ FH F +
Sbjct: 63 EIAESFDRIGGQVNAFTSKEYTCY------YAKVLDEHA-NYALDVLADMFFHSTFDENE 115
Query: 302 VEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPI-GLEEQIKKWDADKIRKF 360
++KE+ + E++M + LL N S +PI G EE + ++ D +R++
Sbjct: 116 LKKEKNVVYEEIKMYEDAPDDIVHDLLSKATYGNH-SLGYPILGTEETLASFNGDSLRQY 174
Query: 361 HERWYFPANATLYIVGDIDNVSKTIDQIEAVFG 393
+Y P + + G+I + I +E FG
Sbjct: 175 MHDYYTPDRVVISVAGNISD--SFIKDVEKWFG 205
>sp|P50335|YHJJ_SALTY Protein YhjJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=yhjJ PE=3 SV=2
Length = 495
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 27/248 (10%)
Query: 180 LPSHPKLYRGQLRNGLRYLILPN-KVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAF 238
L P +G L NGL++ +L + P+ R E ++++ GS+ E + G +H I +A
Sbjct: 27 LQPDPAWQQGTLANGLQWQVLATPQRPSDRIEVRLQVNTGSLTESTQQSGFSHAIPRIAL 86
Query: 239 -----LGSKKREKLLGTG-----ARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDAL 288
L + + L G + T++++ P D ++ L + +
Sbjct: 87 TQSGGLDAAQARSLWQQGFDPKRPMPPVIVSYDSTLYNLSLPNNRNDLLKEALTYLANVS 146
Query: 289 NEIAFHPKFLSSRVEKERR-AILSELQMMNTIEYRVD-CQLLQHLHSENKLSKRFPIGLE 346
++ P+ ++ + E A YR+ LL H +E + P+
Sbjct: 147 GKLTITPETVNHALSSEDMVATWPADTKEGWWRYRLKGSALLGHDPAE---PLKQPV--- 200
Query: 347 EQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASAST 406
DA KI+ F+E+WY P TL +VG+ID S +QI FG + ET A
Sbjct: 201 ------DAAKIQAFYEKWYTPDAMTLIVVGNIDARS-VAEQINKTFGTLKGKRET-PAPV 252
Query: 407 PTSSAFGA 414
PT S A
Sbjct: 253 PTLSPLRA 260
>sp|Q8Z286|YHJJ_SALTI Protein YhjJ OS=Salmonella typhi GN=yhjJ PE=3 SV=1
Length = 495
Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 103/248 (41%), Gaps = 27/248 (10%)
Query: 180 LPSHPKLYRGQLRNGLRYLILPN-KVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAF 238
L P +G L NGL++ +L + P+ R E ++++ GS+ E + G +H I +A
Sbjct: 27 LQPDPAWQQGTLANGLQWQVLATPQRPSDRIEVRLQVNTGSLTESTQQSGFSHAIPRIAL 86
Query: 239 -----LGSKKREKLLGTG-----ARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDAL 288
L + + L G + T++ + P D ++ L + +
Sbjct: 87 TQSGGLDAAQARSLWQQGFDPKRPMPPVIVSYDSTLYSLSLPNNRNDLLKEALTYLANVS 146
Query: 289 NEIAFHPKFLSSRVEKERR-AILSELQMMNTIEYRVD-CQLLQHLHSENKLSKRFPIGLE 346
++ P+ ++ + E A YR+ LL H +E + P+
Sbjct: 147 GKLTITPETVNHALSSEDMVATWPADTKEGWWRYRLKGSALLGHDPAE---PLKQPV--- 200
Query: 347 EQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASAST 406
DA KI+ F+E+WY P TL +VG+ID S +QI FG + ET A
Sbjct: 201 ------DAAKIQAFYEKWYTPDAMTLIVVGNIDARS-VAEQINKTFGTLKGKRET-PAPV 252
Query: 407 PTSSAFGA 414
PT S A
Sbjct: 253 PTLSPLRA 260
>sp|Q4W6B5|MPPB_DICDI Mitochondrial-processing peptidase subunit beta OS=Dictyostelium
discoideum GN=mppB PE=1 SV=1
Length = 469
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 157 RQSLDPLYPELERSEFEAFLNAELPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIH 216
R+++DP Y L P+ L NG+R + + + +
Sbjct: 21 RKTVDPSY---------------LKISPETKITTLSNGIR--VATEQTYGEVASVGVWVD 63
Query: 217 AGSIDEEDDEQGIAHMIEHVAFLGSKKR-------EKLLGTGARSNAYTDFHHTVFHIHS 269
+GS+ E D G+AH +EH+ F G+ KR ++ G NA+T H+ +++
Sbjct: 64 SGSVYETDKNNGVAHFLEHMIFKGTAKRPTPQSIETEIENMGGSLNAFTSREHSAYYMKV 123
Query: 270 PTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQ 329
+D +P +D L++I + KF +S +E+ER ILSE + + E V L
Sbjct: 124 L-------KDNVPNAVDILSDILQNSKFETSLIEQERDTILSENDYIQSKEDEVVFDQLH 176
Query: 330 HLHSENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIE 389
+ R +G E IK ++I++F Y + G + N + ++Q++
Sbjct: 177 AAAFQGSALGRTILGPVENIKSITREQIQEFINENYTGDRLVISAAGAV-NHEQLVEQVK 235
Query: 390 AVFGH 394
F +
Sbjct: 236 EKFAN 240
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes
GN=mppB PE=3 SV=1
Length = 466
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 215 IHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK------LLGTGARSNAYTDFHHTVFHIH 268
I AGS E D G AH +EH+AF G+ +R + + GA NAYT TV++
Sbjct: 57 IDAGSRAETDKTNGTAHFLEHMAFKGTGRRSQHALELEVENIGAHLNAYTSREQTVYYAK 116
Query: 269 SPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLL 328
S ++KD +P+ +D +++I + K S +E+ER IL E Q ++ +++ +
Sbjct: 117 S--FSKD-----VPVAVDIISDILQNSKLESGAIERERDVILREQQ---EVDKQLEEVVF 166
Query: 329 QHLHS---ENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVS 382
HLH+ + + R +G + I D + + + Y L G +D+ S
Sbjct: 167 DHLHAVAFQGQPLGRTILGPKNNILSIQRDDLASYIQTNYTADRMVLVGTGGVDHQS 223
>sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus
GN=Pmpcb PE=2 SV=1
Length = 489
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 155 IERQSLDPLYPELERSEFEAFLNAELPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHME 214
+ R + PLY +R + + P+ L NGLR + S +
Sbjct: 27 LRRAAAQPLYFGGDRLRSTQAAPQVVLNVPETQVTCLENGLR--VASENSGLSTCTVGLW 84
Query: 215 IHAGSIDEEDDEQGIAHMIEHVAFLGSKKREKL------LGTGARSNAYTDFHHTVFHIH 268
I AGS E + G AH +EH+AF G+KKR +L GA NAYT TV+ +
Sbjct: 85 IDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVY--Y 142
Query: 269 SPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLL 328
+ +++D LP ++ L +I + + +E+ER IL E+Q + T V L
Sbjct: 143 AKAFSRD-----LPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYL 197
Query: 329 QHLHSENKLSKRFPIGLEEQIK 350
+N R +G E IK
Sbjct: 198 HATAYQNTALGRTILGPTENIK 219
>sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus
GN=PMPCB PE=2 SV=1
Length = 490
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 191 LRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREKL--- 247
L NGLR + + + I AGS E + G AH +EH+AF G+KKR +L
Sbjct: 64 LENGLR--VASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLE 121
Query: 248 ---LGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEK 304
GA NAYT TV+ ++ ++KD LP ++ L +I + + +E+
Sbjct: 122 LEIENMGAHLNAYTSREQTVY--YAKAFSKD-----LPRAVEILADIIQNSTLGEAEIER 174
Query: 305 ERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIK 350
ER IL E+Q + T V L +N R +G E IK
Sbjct: 175 ERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIK 220
>sp|P11913|MPPB_NEUCR Mitochondrial-processing peptidase subunit beta OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=pep PE=1 SV=1
Length = 476
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Query: 213 MEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK------LLGTGARSNAYTDFHHTVFH 266
M I AGS E D+ G AH +EH+AF G+ KR + + GA NAYT +TV+
Sbjct: 66 MWIDAGSRAETDETNGTAHFLEHLAFKGTTKRTQQQLELEIENMGAHLNAYTSRENTVY- 124
Query: 267 IHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQ 326
+ K +ED +P +D L +I + K S +E+ER IL E + +E +++
Sbjct: 125 -----FAKALNED-VPKCVDILQDILQNSKLEESAIERERDVILRESE---EVEKQLEEV 175
Query: 327 LLQHLHS 333
+ HLH+
Sbjct: 176 VFDHLHA 182
>sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens
GN=PMPCB PE=1 SV=2
Length = 489
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 215 IHAGSIDEEDDEQGIAHMIEHVAFLGSKKREKL------LGTGARSNAYTDFHHTVFHIH 268
I AGS E + G AH +EH+AF G+KKR +L GA NAYT TV+ +
Sbjct: 85 IDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVY--Y 142
Query: 269 SPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLL 328
+ ++KD LP ++ L +I + + +E+ER IL E+Q + T V L
Sbjct: 143 AKAFSKD-----LPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYL 197
Query: 329 QHLHSENKLSKRFPIGLEEQIK 350
+N R +G E IK
Sbjct: 198 HATAYQNTALGRTILGPTENIK 219
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii
GN=PMPCB PE=2 SV=1
Length = 489
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 215 IHAGSIDEEDDEQGIAHMIEHVAFLGSKKREKL------LGTGARSNAYTDFHHTVFHIH 268
I AGS E + G AH +EH+AF G+KKR +L GA NAYT TV+ +
Sbjct: 85 IDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVY--Y 142
Query: 269 SPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLL 328
+ ++KD LP ++ L +I + + +E+ER IL E+Q + T V L
Sbjct: 143 AKAFSKD-----LPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYL 197
Query: 329 QHLHSENKLSKRFPIGLEEQIK 350
+N R +G E IK
Sbjct: 198 HATAYQNTALGRTILGPTENIK 219
>sp|O31766|YMFH_BACSU Uncharacterized zinc protease YmfH OS=Bacillus subtilis (strain
168) GN=ymfH PE=3 SV=2
Length = 428
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 186 LYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEE-----DDEQ-----GIAHMIEH 235
LY ++ NGL +LP K ++ A GSID +E GIAH +EH
Sbjct: 14 LYHEKMSNGLDVYVLPKK-GFNKTYAVFTTKYGSIDNRFVPLGKNEMVHVPDGIAHFLEH 72
Query: 236 VAFLGSKKR--EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAF 293
F + + GA +NA+T F T + S + + + E L+ V D
Sbjct: 73 KLFEKADGDVFQDFSKQGASANAFTSFTRTAYLFSSTSNVERNLETLIDFVQD------- 125
Query: 294 HPKFLSSRVEKERRAILSELQMMN-TIEYRVDCQLLQHLHSENKLSKRFPI-GLEEQIKK 351
P F VEKE+ I E+ M + ++R+ ++++++ E+ + R I G E I
Sbjct: 126 -PYFTEKTVEKEKGIIGQEINMYDDNPDWRLYFGVIENMYKEHPV--RIDIAGTVESISH 182
Query: 352 WDADKIRKFHERWYFPANATLYIVGDID 379
D + + +E +Y P+N L+IVG +D
Sbjct: 183 ITKDLLYECYETFYHPSNMLLFIVGPVD 210
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus
GN=UQCRC1 PE=1 SV=2
Length = 480
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 23/233 (9%)
Query: 180 LPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFL 239
L S P+ QL NGLR + P + I AGS E + G + +EH+AF
Sbjct: 42 LQSVPETQVSQLDNGLRVASEQSSQPTC--TVGVWIDAGSRYESEKNNGAGYFVEHLAFK 99
Query: 240 GSKKR------EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAF 293
G+K R +++ GA NAY+ HT ++I + +KD LP ++ L +I
Sbjct: 100 GTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKA--LSKD-----LPKAVELLADIVQ 152
Query: 294 HPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLE---EQIK 350
+ S++EKER IL ELQ +T V + +LH+ +E E ++
Sbjct: 153 NCSLEDSQIEKERDVILQELQENDTSMRDV---VFNYLHATAFQGTPLAQSVEGPSENVR 209
Query: 351 KWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVF-GHTGNENETA 402
K + ++ R Y L G +++ + +D + F G +G +E A
Sbjct: 210 KLSRADLTEYLSRHYKAPRMVLAAAGGLEH-RQLLDLAQKHFSGLSGTYDEDA 261
>sp|P43264|QCR1_EUGGR Ubiquinol-cytochrome-c reductase complex core protein I,
mitochondrial OS=Euglena gracilis PE=2 SV=1
Length = 494
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 16/125 (12%)
Query: 215 IHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK------LLGTGARSNAYTDFHHTVFHIH 268
I AGS E + G+AH +EH+ F G+ KR + + GA NAYT HT +++
Sbjct: 54 IDAGSRWETEKNNGVAHFLEHMNFKGTGKRSRQDIEFGMEKMGAHLNAYTSREHTCYYVK 113
Query: 269 SPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLL 328
+ KD +P +D L +I + K ++ ER+ I+ E + +E R+D L+
Sbjct: 114 --CFKKD-----VPEAVDILADILLNSKRTEQDLDAERQTIVQEKE---DVEARIDEVLM 163
Query: 329 QHLHS 333
HLHS
Sbjct: 164 DHLHS 168
>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1
SV=4
Length = 990
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 34/239 (14%)
Query: 187 YRG-QLRNGLRYLIL--PNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKK 243
YRG QL NGL+ L++ PN ++ A + + G + + + G+AH EH+ FLG++K
Sbjct: 37 YRGLQLENGLKVLLISDPNTDVSA---AALSVQVGHMSDPTNLPGLAHFCEHMLFLGTEK 93
Query: 244 -------REKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPK 296
L +G SNA T T +H H D L LD + P
Sbjct: 94 YPHENGYTTYLSQSGGSSNAATYPLMTKYHFHVAP-------DKLDGALDRFAQFFIAPL 146
Query: 297 FLSSRVEKERRAILSELQM-MNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQI------ 349
F S E+E A+ SE + + + +R+ Q+ +HL + +F G + +
Sbjct: 147 FTPSATEREINAVNSEHEKNLPSDLWRIK-QVNRHLAKPDHAYSKFGSGNKTTLSEIPKS 205
Query: 350 KKWDA-DKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTP 407
K D D++ KFH++WY L ++G +++D++E + +E E + P
Sbjct: 206 KNIDVRDELLKFHKQWYSANIMCLAVIG-----KESLDELEGMVLEKFSEIENKNVKVP 259
>sp|O32965|Y855_MYCLE Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae
(strain TN) GN=ML0855 PE=3 SV=1
Length = 445
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 188 RGQLRNGLRYLILPNKVPASR-FEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR-- 244
R L GLR ++ +PA R + + GS DE G AH +EH+ F + R
Sbjct: 24 RTTLPGGLR--VVTEHLPAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTA 81
Query: 245 ----EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSS 300
+ + G NA+T HT ++ H DSD L L +D + ++ + +
Sbjct: 82 MDIAQAIDAVGGELNAFTAKEHTCYYAH----VLDSD---LELAVDLVADVVLNGRCAVD 134
Query: 301 RVEKERRAILSELQMMNTI-EYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIRK 359
VE ER +L E+ M + E + L L ++ + R IG E + ++
Sbjct: 135 DVELERDVVLEEIAMRDDDPEDALGDMFLAALFGDHPVG-RPVIGTMESVSAMTRTQLHS 193
Query: 360 FHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTPTSSAFGAMANFL 419
FH R Y P + + G++D+ + + V H G+ S P + G +
Sbjct: 194 FHVRRYTPERMVVAVAGNVDH----DEMVALVREHFGSRLIRGRQSAPPRKSTGRINGG- 248
Query: 420 VPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPP---VEHNWSLS 463
P L++G +++Q+ ++ VR P EH W+LS
Sbjct: 249 -PALTLG---------KRDAEQTHVLL----GVRTPGRSWEHRWALS 281
>sp|Q9P7X1|MPPB_SCHPO Probable mitochondrial-processing peptidase subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr1 PE=2 SV=1
Length = 457
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 21/233 (9%)
Query: 184 PKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKK 243
PK L+NGL + + A + + AGS E G AH +EH+AF G+K
Sbjct: 20 PKTETTTLKNGLT-VATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKN 78
Query: 244 R-EKLL-----GTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKF 297
R +K L TGA NAYT TV++ H+ ++ +P + L +I +
Sbjct: 79 RSQKALELEFENTGAHLNAYTSREQTVYYAHAF-------KNAVPNAVAVLADILTNSSI 131
Query: 298 LSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHS---ENKLSKRFPIGLEEQIKKWDA 354
+S VE+ER+ IL E + ++ + D + HLH+ + R +G +E I+
Sbjct: 132 SASAVERERQVILREQEEVDKM---ADEVVFDHLHATAYQGHPLGRTILGPKENIESLTR 188
Query: 355 DKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTP 407
+ + ++ + Y + G I + + + E FGH E S P
Sbjct: 189 EDLLQYIKDNYRSDRMIISSAGSISH-EELVKLAEKYFGHLEPSAEQLSLGAP 240
>sp|P05458|PTRA_ECOLI Protease 3 OS=Escherichia coli (strain K12) GN=ptrA PE=1 SV=1
Length = 962
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 190 QLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR----- 244
+L NG+ L++ + A + + GS+++ + QG+AH +EH++ +GSKK
Sbjct: 48 RLDNGMVVLLVSDPQAVKSLSA-LVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADS 106
Query: 245 --EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRV 302
E L G NA T + T F++ + + D LP +D L + P
Sbjct: 107 LAEYLKMHGGSHNASTAPYRTAFYL-------EVENDALPGAVDRLADAIAEPLLDKKYA 159
Query: 303 EKERRAILSELQMMNTIE----YRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIR 358
E+ER A+ +EL M T + +V + + H +K S L ++ ++
Sbjct: 160 ERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALK 219
Query: 359 KFHERWY 365
FHE++Y
Sbjct: 220 DFHEKYY 226
>sp|Q83QC3|PTRA_SHIFL Protease 3 OS=Shigella flexneri GN=ptrA PE=3 SV=1
Length = 962
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 190 QLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR----- 244
+L NG+ L++ + A + + GS+++ + QG+AH +EH++ +GSKK
Sbjct: 48 RLDNGMVVLLVSDPQAVKSLSA-LVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADS 106
Query: 245 --EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRV 302
E L G NA T + T F++ + + D LP +D L + P
Sbjct: 107 LAEYLKMHGGSHNASTAPYRTAFYL-------EVENDALPGAVDRLADAIAEPLLDKKYA 159
Query: 303 EKERRAILSELQMMNTIE----YRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIR 358
E+ER A+ +EL M T + +V + + H +K S L ++ ++
Sbjct: 160 ERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALK 219
Query: 359 KFHERWY 365
FHE++Y
Sbjct: 220 DFHEKYY 226
>sp|Q8X6M8|PTRA_ECO57 Protease 3 OS=Escherichia coli O157:H7 GN=ptrA PE=3 SV=1
Length = 962
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 190 QLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR----- 244
+L NG+ L++ + A + + GS+++ + QG+AH +EH++ +GSKK
Sbjct: 48 RLDNGMVVLLVSDPQAVKSLSA-LVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADS 106
Query: 245 --EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRV 302
E L G NA T + T F++ + + D LP +D L + P
Sbjct: 107 LAEYLKMHGGSHNASTAPYRTAFYL-------EVENDALPGAVDRLADAIAEPLLDKKYA 159
Query: 303 EKERRAILSELQMMNTIE----YRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIR 358
E+ER A+ +EL M T + +V + + H +K S L ++ ++
Sbjct: 160 ERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALK 219
Query: 359 KFHERWY 365
FHE++Y
Sbjct: 220 DFHEKYY 226
>sp|Q8CVS2|PTRA_ECOL6 Protease 3 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ptrA PE=3 SV=1
Length = 962
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 190 QLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR----- 244
+L NG+ L++ + A + + GS+++ + QG+AH +EH++ +GSKK
Sbjct: 48 RLDNGMVVLLVSDPQAVKSLSA-LVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADS 106
Query: 245 --EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRV 302
E L G NA T + T F++ + + D LP +D L + P
Sbjct: 107 LAEYLKMHGGSHNASTAPYRTAFYL-------EVENDALPGAVDRLADAIAEPLLDKKYA 159
Query: 303 EKERRAILSELQMMNTIE----YRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIR 358
E+ER A+ +EL M T + +V + + H +K S L ++ ++
Sbjct: 160 ERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALK 219
Query: 359 KFHERWY 365
FHE++Y
Sbjct: 220 DFHEKYY 226
>sp|P10507|MPPB_YEAST Mitochondrial-processing peptidase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS1 PE=1
SV=1
Length = 462
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 184 PKLYRGQLRNGLRYLI--LPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGS 241
P +L NGL +PN A+ + + AGS E G AH +EH+AF G+
Sbjct: 24 PGTRTSKLPNGLTIATEYIPNTSSAT---VGIFVDAGSRAENVKNNGTAHFLEHLAFKGT 80
Query: 242 KKREK------LLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHP 295
+ R + + G+ NAYT +TV+ Y K ED +P +D L++I
Sbjct: 81 QNRSQQGIELEIENIGSHLNAYTSRENTVY------YAKSLQED-IPKAVDILSDILTKS 133
Query: 296 KFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHS---ENKLSKRFPIGLEEQIKKW 352
+S +E+ER I+ E + ++ + D + HLH +++ R +G + IK
Sbjct: 134 VLDNSAIERERDVIIRESEEVDKM---YDEVVFDHLHEITYKDQPLGRTILGPIKNIKSI 190
Query: 353 DADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGH 394
++ + + Y L G +D+ K + + FGH
Sbjct: 191 TRTDLKDYITKNYKGDRMVLAGAGAVDH-EKLVQYAQKYFGH 231
>sp|Q10040|YQA4_CAEEL Putative zinc protease C28F5.4 OS=Caenorhabditis elegans GN=C28F5.4
PE=3 SV=2
Length = 856
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 44/232 (18%)
Query: 185 KLYRG-QLRNGLRYLILPNKVPASRFEA-HMEIHAGSIDEEDDEQGIAHMIEHVAFLGSK 242
K YRG +L NGLR L++ + +R A +++ G + + + G+AH EH+ FLG+
Sbjct: 25 KKYRGLELTNGLRVLLVSDS--KTRVSAVALDVKVGHLMDPWELPGLAHFCEHMLFLGTA 82
Query: 243 KR-------EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHP 295
K + L SNAYTD HT Y+ + + L LD + P
Sbjct: 83 KYPSEREYFKYLAANNGDSNAYTDTDHT-------NYSFEVRSEKLYGALDRFAQFFLDP 135
Query: 296 KFLSSRVEKERRAILSE-LQMMNTIEYRVDCQLLQHLHSENKLSK------RFPIG---- 344
+F S E+E A+ E L +N +R L E LSK +F IG
Sbjct: 136 QFTESATEREVCAVNCEYLDKVNEDFWRC-------LQVERSLSKPGHDYSKFAIGNKKT 188
Query: 345 -LEEQIKKW--DADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFG 393
LE+ K D + F++ WY T IVG +++D +E+ G
Sbjct: 189 LLEDPRTKGIEPRDVLLDFYKNWYSSDIMTCCIVG-----KESLDVLESYLG 235
>sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus
GN=Uqcrc1 PE=1 SV=2
Length = 480
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 15/141 (10%)
Query: 180 LPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFL 239
L S P+ L NGLR + + + + I AGS E + G + +EH+AF
Sbjct: 42 LQSVPETQVSILDNGLR--VASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFK 99
Query: 240 GSKKR------EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAF 293
G+K R +++ GA NAY+ HT + I + +KD LP V++ L +I
Sbjct: 100 GTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKA--LSKD-----LPKVVELLADIVQ 152
Query: 294 HPKFLSSRVEKERRAILSELQ 314
+ S++EKER IL E+Q
Sbjct: 153 NSSLEDSQIEKERDVILREMQ 173
>sp|Q92IX7|Y293_RICCN Uncharacterized zinc protease RC0293 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0293 PE=3 SV=1
Length = 412
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Query: 190 QLRNGLRYLILPNKVP-ASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR---- 244
+L+NGL IL +P + ++ G+ E +E GI+H +EH+AF G+K R
Sbjct: 9 KLKNGLT--ILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAKQ 66
Query: 245 --EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRV 302
E G NAYT +TV+ ++ +++ D+ L+ L +I + F +
Sbjct: 67 IAEAFDAIGGHFNAYTGHENTVY--YARVLSENCDK-----ALNILADIIQNSIFSDEEI 119
Query: 303 EKERRAILSEL-QMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIRKFH 361
KE + I+ E+ + + V + ++ E L K +G + + + + F
Sbjct: 120 AKEYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSI-LGTAKTLATFTKEHFFNFI 178
Query: 362 ERWYFPANATLYIVGDIDN 380
+++Y AN L I G+ID+
Sbjct: 179 DKYYNAANLYLSIAGNIDH 197
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 188 RGQLRNGLRYL--ILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR- 244
R L GLR + LP AS + + GS DE G AH +EH+ F + R
Sbjct: 17 RTTLPGGLRVVTEFLPAVHSAS---VGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRS 73
Query: 245 -----EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLS 299
+ + G NA+T HT ++ H SD LPL +D + ++ + + +
Sbjct: 74 AVDIAQAMDAVGGELNAFTAKEHTCYYAH----VLGSD---LPLAVDLVADVVLNGRCAA 126
Query: 300 SRVEKERRAILSELQMM-NTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIR 358
VE ER +L E+ M + E + L L ++ + R IG + + +++
Sbjct: 127 DDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVG-RPVIGSAQSVSVMTRAQLQ 185
Query: 359 KFHERWYFPANATLYIVGDIDN 380
FH R Y P + G++D+
Sbjct: 186 SFHLRRYTPERMVVAAAGNVDH 207
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 188 RGQLRNGLRYL--ILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR- 244
R L GLR + LP AS + + GS DE G AH +EH+ F + R
Sbjct: 17 RTTLPGGLRVVTEFLPAVHSAS---VGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRS 73
Query: 245 -----EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLS 299
+ + G NA+T HT ++ H SD LPL +D + ++ + + +
Sbjct: 74 AVDIAQAMDAVGGELNAFTAKEHTCYYAH----VLGSD---LPLAVDLVADVVLNGRCAA 126
Query: 300 SRVEKERRAILSELQMM-NTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIR 358
VE ER +L E+ M + E + L L ++ + R IG + + +++
Sbjct: 127 DDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVG-RPVIGSAQSVSVMTRAQLQ 185
Query: 359 KFHERWYFPANATLYIVGDIDN 380
FH R Y P + G++D+
Sbjct: 186 SFHLRRYTPERMVVAAAGNVDH 207
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 190 QLRNGLRYLILPNKVP-ASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR---- 244
+L+NGL IL +P + ++ GS E E+GIAH +EH+AF G+K R
Sbjct: 9 KLKNGLT--ILTYNMPYVNSVAINLIAKVGSRYENPGEEGIAHFLEHMAFKGTKTRTAKQ 66
Query: 245 --EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRV 302
E+ G NAYT TV+ +S +++ ++ L + +I + F +
Sbjct: 67 IAEEFDSIGGHFNAYTGHEKTVY--YSRVLSENCNK-----ALAIIADIVQNSAFAEEEI 119
Query: 303 EKERRAILSEL-QMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIRKFH 361
KE + IL E+ + + V + + + L K +G + I+ ++ D KF
Sbjct: 120 AKEYQVILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPI-LGTSKTIETFNRDHFLKFT 178
Query: 362 ERWYFPANATLYIVGDIDNVSKTIDQIEAVF 392
+ Y N L I G++D+ + + + E +F
Sbjct: 179 GKHYNAENFYLSIAGNVDH-EEIVKEAERLF 208
>sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus
norvegicus GN=Uqcrc1 PE=1 SV=1
Length = 480
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Query: 175 FLNAELPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIE 234
F+ A L S P+ L NGLR + P +++ GS E + G + +E
Sbjct: 38 FVQA-LQSVPETQVSVLDNGLRVASEQSSHPTCTVGVWIDV--GSRYETEKNNGAGYFLE 94
Query: 235 HVAFLGSKKR------EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDAL 288
H+AF G+K R +++ GA NAY+ HT + I + +KD LP V++ L
Sbjct: 95 HLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKA--LSKD-----LPKVVELL 147
Query: 289 NEIAFHPKFLSSRVEKERRAILSELQ 314
+I + S++EKER IL E+Q
Sbjct: 148 ADIVQNISLEDSQIEKERDVILREMQ 173
>sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens
GN=UQCRC1 PE=1 SV=3
Length = 480
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 191 LRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR------ 244
L NGLR + P +++ GS E + G + +EH+AF G+K R
Sbjct: 53 LDNGLRVASEQSSQPTCTVGVWIDV--GSRFETEKNNGAGYFLEHLAFKGTKNRPGSALE 110
Query: 245 EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEK 304
+++ GA NAY+ HT ++I + +KD LP ++ L +I + S++EK
Sbjct: 111 KEVESMGAHLNAYSTREHTAYYIKA--LSKD-----LPKAVELLGDIVQNCSLEDSQIEK 163
Query: 305 ERRAILSELQ 314
ER IL E+Q
Sbjct: 164 ERDVILREMQ 173
>sp|P98080|UCR1_CAEEL Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis
elegans GN=ucr-1 PE=3 SV=2
Length = 471
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 19/226 (8%)
Query: 180 LPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFL 239
L S P+ L+NG R + N + +E GS E + G+AH +E +
Sbjct: 32 LASAPQAEVTTLKNGFRVVTEDNGSATATVGVWIET--GSRFENEKNNGVAHFLERLIHK 89
Query: 240 GSKKR------EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAF 293
G+ KR +L GA+ N++T+ T + + +D ++ V+D L ++
Sbjct: 90 GTGKRASAALESELNAIGAKLNSFTERDQTAVFVQAGA--QDVEK-----VVDILADVLR 142
Query: 294 HPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWD 353
+ K +S ++ ER +L EL+ + V +L + +G E I
Sbjct: 143 NSKLEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGFQGTPLALSVLGTSESIPNIS 202
Query: 354 ADKIRKFHERWYFPANATLYIV-GDIDNVSKTIDQIEAVFGHTGNE 398
A +++++ E Y P L V G + NVS D+ FG NE
Sbjct: 203 AQQLKEWQEDHYRPVRMVLSAVGGGVSNVSSLADKY---FGDLSNE 245
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16
PE=2 SV=1
Length = 970
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 25/227 (11%)
Query: 191 LRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKK------- 243
L+N L+ L++ + + A M + GS + +G+AH +EH+ F S+K
Sbjct: 30 LKNLLQVLLISDP-DTDKCAASMSVSVGSFSDPQGLEGLAHFLEHMLFYASEKYPEEDSY 88
Query: 244 REKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVE 303
+ + G +NAYT T +H D + D LD + P +
Sbjct: 89 SKYITEHGGSTNAYTASEETNYHF-------DVNADCFDEALDRFAQFFIKPLMSADATM 141
Query: 304 KERRAILSELQM-MNTIEYRVDCQLLQHLHSENKLSKRFPIG------LEEQIKKWDA-D 355
+E +A+ SE Q + + +R+ QL +HL E+ +F G + Q K D
Sbjct: 142 REIKAVDSENQKNLLSDGWRIR-QLQKHLSKEDHPYHKFSTGNMDTLHVRPQAKGVDTRS 200
Query: 356 KIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETA 402
++ KF+E ++ AN +V +++ K D +E +F N N+
Sbjct: 201 ELIKFYEE-HYSANIMHLVVYGKESLDKIQDLVERMFQEIQNTNKVV 246
>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1
Length = 1019
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 181 PSHPKLYRG-QLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFL 239
P + YRG +L NG++ L++ + + A +++H GS+ + + G++H EH+ FL
Sbjct: 58 PEDKREYRGLELANGIKVLLISDPT-TDKSSAALDVHIGSLSDPPNIPGLSHFCEHMLFL 116
Query: 240 GSKKREK-------LLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIA 292
G+KK K L SNA+T HT Y D + L LD +
Sbjct: 117 GTKKYPKENEYSQFLSEHAGSSNAFTSGEHT-------NYYFDVSHEHLEGALDRFAQFF 169
Query: 293 FHPKFLSSRVEKERRAILSE 312
P F +S ++E A+ SE
Sbjct: 170 LCPLFDASCKDREVNAVDSE 189
>sp|Q8ZMB5|PTRA_SALTY Protease 3 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=ptrA PE=3 SV=1
Length = 962
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 215 IHAGSIDEEDDEQGIAHMIEHVAFLGSKKR-------EKLLGTGARSNAYTDFHHTVFHI 267
+ GS+++ + QG+AH +EH+ +GSKK E L G NA T + T F++
Sbjct: 72 VPVGSLEDPEAHQGLAHYLEHMCLMGSKKYPQADSLAEYLKRHGGSHNASTAPYRTAFYL 131
Query: 268 HSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNT 318
+ + D LP +D L + P E+ER A+ +EL M T
Sbjct: 132 -------EVENDALPGAVDRLADAIAAPLLNKKYAERERNAVNAELTMART 175
>sp|Q00302|MPPB_BLAEM Mitochondrial-processing peptidase subunit beta OS=Blastocladiella
emersonii GN=MPP1 PE=3 SV=1
Length = 465
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 184 PKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKK 243
PK +L NGL N A+ + I +GS E G+AH +EH++F G+K+
Sbjct: 33 PKTQVTRLPNGLTVATESNPALATA-TVGVWIDSGSRAETKANNGVAHFLEHISFKGTKQ 91
Query: 244 REK------LLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKF 297
R + + G NAYT TV+ Y K +D+ V + L +I +
Sbjct: 92 RTQSGLEIEIENMGGHLNAYTSREQTVY------YAKLFSQDVAKGV-NILGDILQNSTL 144
Query: 298 LSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHS----ENKLSKRFPIGLEEQIKKWD 353
+++ER IL E + ++ +V+ + HLH+ EN L +G +E I+
Sbjct: 145 DPGAIDRERAVILREAE---EVDKQVEEVVFDHLHAAAFPENALGYTI-LGPKENIQTLS 200
Query: 354 ADKIRKFHERWYFPANATLYIVGDID 379
++ + + Y + G++D
Sbjct: 201 QADLQAYIKNNYTADRMVVVGAGNVD 226
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4
Length = 1019
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 181 PSHPKLYRG-QLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFL 239
P + YRG +L NG++ L++ + + A +++H GS+ + + G++H EH+ FL
Sbjct: 58 PEDKREYRGLELANGIKVLLISDPT-TDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFL 116
Query: 240 GSKKREK-------LLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIA 292
G+KK K L SNA+T HT Y D + L LD +
Sbjct: 117 GTKKYPKENEYSQFLSEHAGSSNAFTSGEHT-------NYYFDVSHEHLEGALDRFAQFF 169
Query: 293 FHPKFLSSRVEKERRAILSE 312
P F S ++E A+ SE
Sbjct: 170 LCPLFDESCKDREVNAVDSE 189
>sp|P47245|NRDC_RAT Nardilysin OS=Rattus norvegicus GN=Nrd1 PE=2 SV=1
Length = 1161
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 23/194 (11%)
Query: 211 AHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK-------LLGTGARSNAYTDFHHT 263
A + + GS + DD G+AH +EH+ F+GS K L G NA TD T
Sbjct: 224 AALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERT 283
Query: 264 VFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRV 323
VF D LD + HP + +++E A+ SE Q+ +
Sbjct: 284 VFQF-------DVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANR 336
Query: 324 DCQLLQHLHSENKLSKRFPIG----LEEQIKKWDAD---KIRKFHERWYFPANATLYIVG 376
L L +F G L+ + KK + D ++R+F R+Y TL +
Sbjct: 337 KEMLFGSLARPGHPMGKFFWGNAETLKHEPKKNNIDTHARLREFWMRYYSAHYMTLVVQS 396
Query: 377 D--IDNVSKTIDQI 388
+D + K + +I
Sbjct: 397 KETLDTLEKWVTEI 410
>sp|Q8BHG1|NRDC_MOUSE Nardilysin OS=Mus musculus GN=Nrd1 PE=1 SV=1
Length = 1161
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 23/194 (11%)
Query: 211 AHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK-------LLGTGARSNAYTDFHHT 263
A + + GS + DD G+AH +EH+ F+GS K L G NA TD T
Sbjct: 224 AALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERT 283
Query: 264 VFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRV 323
VF D LD + HP + +++E A+ SE Q+ +
Sbjct: 284 VFQF-------DVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANR 336
Query: 324 DCQLLQHLHSENKLSKRFPIG----LEEQIKKWDAD---KIRKFHERWYFPANATLYIVG 376
L L +F G L+ + KK + D ++R+F R+Y TL +
Sbjct: 337 KEMLFGSLARPGHPMGKFFWGNAETLKHEPKKNNIDTHARLREFWMRYYSAHYMTLVVQS 396
Query: 377 D--IDNVSKTIDQI 388
+D + K + +I
Sbjct: 397 KETLDTLEKWVTEI 410
>sp|Q8RKH2|ALBF_BACIU Putative zinc protease AlbF OS=Bacillus subtilis GN=albF PE=3 SV=1
Length = 427
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 228 GIAHMIEHVAFL--GSKKREKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVL 285
G AH +EH+ F G GA NA+T + T F T D +P++L
Sbjct: 63 GTAHFLEHLLFWHNGRNLYTDFFAHGALLNAFTTYTDTNFMF---TSLPDRLRQTIPILL 119
Query: 286 DALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKR----- 340
DAL +F K ++ +E+ I SE+Q + ++ QL H + LS
Sbjct: 120 DALWNHSFDKKMIT----QEKAVITSEIQTAH-----LNHQLYYHYQLISMLSPASPAAV 170
Query: 341 FPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVG 376
FP G E I+ D ++K + Y P TL+++G
Sbjct: 171 FPAGRIEDIEALDIRDLQKAYNAAYQPQRMTLFLIG 206
>sp|Q5R4H6|NRDC_PONAB Nardilysin OS=Pongo abelii GN=NRD1 PE=2 SV=1
Length = 1152
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 23/194 (11%)
Query: 211 AHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK-------LLGTGARSNAYTDFHHT 263
A + + GS + DD G+AH +EH+ F+GS K L G NA TD T
Sbjct: 214 AALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERT 273
Query: 264 VFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRV 323
VF D LD + HP + +++E A+ SE Q+ +
Sbjct: 274 VFQF-------DVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANR 326
Query: 324 DCQLLQHLHSENKLSKRFPIG----LEEQIKKWDAD---KIRKFHERWYFPANATLYIVG 376
L L +F G L+ + KK + D ++R+F R+Y TL +
Sbjct: 327 KEMLFGSLARPGHPMGKFFWGNAETLKHEPKKNNIDTHARLREFWLRYYSAHYMTLVVQS 386
Query: 377 D--IDNVSKTIDQI 388
+D + K + +I
Sbjct: 387 KETLDTLEKWVTEI 400
>sp|Q10068|YAN2_SCHPO Uncharacterized protein C3H1.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC3H1.02c PE=4 SV=1
Length = 1036
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 40/201 (19%)
Query: 203 KVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR------EKLLGTGARS-N 255
K P SR + + E D G H +EH+ F+GSKK K G N
Sbjct: 37 KTPTSRLQGSFVVAT----EAHDNLGCPHTLEHLCFMGSKKYPMNGILTKFAGRACGDIN 92
Query: 256 AYTDFHHTVFHIHSPTYTKDSDEDLLPLVLD-----ALNEIAFHPK-FLSSRVEKERRAI 309
A TD +T + + + +D LLP+ D L++ AF + + + + +E +
Sbjct: 93 ACTDVDYTSYELSAAE--EDGFLRLLPVFADHILSPILSDEAFCTEVYHINGMGEESGVV 150
Query: 310 LSELQMMNTIEYRV--DCQLLQHLHSENKLSKRFPI---------GLEEQIKKWDADKIR 358
SE+Q + E V DC + ++P+ G +++K +KIR
Sbjct: 151 YSEMQNTQSSETDVMFDCMR----------TSQYPVTSGYYYETGGHPSELRKLSIEKIR 200
Query: 359 KFHERWYFPANATLYIVGDID 379
++H+ Y P+N L + G I+
Sbjct: 201 EYHKEMYVPSNICLIVTGCIN 221
>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1
Length = 1019
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 187 YRG-QLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKRE 245
YRG +L NG++ L++ + + A +++H GS+ + + G++H EH+ FLG+KK
Sbjct: 64 YRGLELANGIKVLLVSDPT-TDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYP 122
Query: 246 K-------LLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFL 298
K L SNA+T HT Y D + L LD + P F
Sbjct: 123 KENEYSQFLSEHAGSSNAFTSGEHT-------NYYFDVSHEHLEGALDRFAQFFLCPLFD 175
Query: 299 SSRVEKERRAILSE 312
S ++E A+ SE
Sbjct: 176 ESCKDREVNAVDSE 189
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 190 QLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKR----- 244
+L+NGL L N ++ GS E +E+GI+H +EH+AF G+ R
Sbjct: 9 KLKNGLTVLTY-NMPYVDSVAINLITKVGSRYENSEEEGISHFLEHMAFKGTTTRTAKQI 67
Query: 245 -EKLLGTGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVE 303
E+ G NAYT T++ ++ +++ D+ L+ L +I + F +
Sbjct: 68 AEEFDEIGGHFNAYTGHEKTIY--YARVLSENCDK-----ALNILADIIQNSIFAEEEIA 120
Query: 304 KERRAILSEL-QMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIRKFHE 362
KE + IL E+ + + + + ++ + L K +G + + + + F +
Sbjct: 121 KEYQVILQEIAHSQDNPDDLIYEKFYSSVYKDQPLGKPI-LGASKTLSSFTKEHFLSFID 179
Query: 363 RWYFPANATLYIVGDIDNVSKTIDQIEAVF 392
+ Y N L + G++D+ K + E +F
Sbjct: 180 KHYNAGNLYLSVAGNVDH-DKIVSSAERLF 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,247,515
Number of Sequences: 539616
Number of extensions: 19734982
Number of successful extensions: 51974
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 51832
Number of HSP's gapped (non-prelim): 148
length of query: 1237
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1108
effective length of database: 121,958,995
effective search space: 135130566460
effective search space used: 135130566460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)