Query 000890
Match_columns 1237
No_of_seqs 511 out of 3184
Neff 8.9
Searched_HMMs 46136
Date Tue Apr 2 00:38:32 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000890.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000890hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15101 protease3; Provisiona 100.0 1.2E-69 2.5E-74 714.3 76.5 849 184-1189 42-918 (961)
2 PTZ00432 falcilysin; Provision 100.0 7.4E-61 1.6E-65 618.5 68.0 908 179-1204 85-1109(1119)
3 COG1026 Predicted Zn-dependent 100.0 5.3E-58 1.1E-62 545.9 59.1 867 183-1198 19-958 (978)
4 KOG2019 Metalloendoprotease HM 100.0 8.4E-55 1.8E-59 486.5 53.8 859 179-1191 47-976 (998)
5 COG1025 Ptr Secreted/periplasm 100.0 8.8E-48 1.9E-52 457.0 73.3 861 179-1189 17-897 (937)
6 KOG0959 N-arginine dibasic con 100.0 9.1E-45 2E-49 440.5 70.3 846 185-1187 27-910 (974)
7 COG0612 PqqL Predicted Zn-depe 100.0 1.4E-45 3.1E-50 442.8 35.9 413 179-655 10-432 (438)
8 KOG0960 Mitochondrial processi 100.0 4E-45 8.6E-50 388.1 32.1 406 180-654 28-449 (467)
9 TIGR02110 PQQ_syn_pqqF coenzym 100.0 4E-40 8.7E-45 399.5 35.1 329 188-568 2-346 (696)
10 COG0612 PqqL Predicted Zn-depe 100.0 4.7E-38 1E-42 377.7 40.3 407 732-1202 16-435 (438)
11 KOG0960 Mitochondrial processi 100.0 4.6E-38 1E-42 334.4 33.2 418 732-1232 33-465 (467)
12 KOG0961 Predicted Zn2+-depende 100.0 5.8E-35 1.3E-39 327.2 45.2 865 192-1186 27-970 (1022)
13 KOG2067 Mitochondrial processi 100.0 6.2E-36 1.3E-40 318.6 22.7 393 185-632 24-433 (472)
14 TIGR02110 PQQ_syn_pqqF coenzym 100.0 2.2E-33 4.9E-38 340.8 39.0 335 735-1130 2-348 (696)
15 PRK15101 protease3; Provisiona 100.0 7.1E-32 1.5E-36 356.0 38.7 410 731-1199 42-463 (961)
16 KOG2067 Mitochondrial processi 100.0 1.3E-30 2.9E-35 278.1 29.4 403 732-1202 24-448 (472)
17 PTZ00432 falcilysin; Provision 99.9 6.1E-24 1.3E-28 276.0 37.2 413 737-1198 96-575 (1119)
18 COG1025 Ptr Secreted/periplasm 99.9 3E-21 6.6E-26 231.4 36.6 412 729-1201 20-444 (937)
19 KOG2583 Ubiquinol cytochrome c 99.9 4.4E-21 9.6E-26 206.6 33.6 376 185-632 22-409 (429)
20 KOG0959 N-arginine dibasic con 99.9 3.4E-19 7.3E-24 218.3 36.5 406 730-1198 25-446 (974)
21 KOG2583 Ubiquinol cytochrome c 99.8 3E-17 6.6E-22 177.3 36.0 387 736-1201 26-423 (429)
22 PF00675 Peptidase_M16: Insuli 99.8 3.3E-19 7.1E-24 180.8 15.2 141 196-345 1-148 (149)
23 PF05193 Peptidase_M16_C: Pept 99.7 2.9E-17 6.3E-22 173.0 15.3 181 899-1128 1-184 (184)
24 COG1026 Predicted Zn-dependent 99.7 1.6E-15 3.5E-20 183.4 29.4 398 739-1200 28-459 (978)
25 PF05193 Peptidase_M16_C: Pept 99.6 4.8E-16 1E-20 163.6 10.5 181 351-568 1-184 (184)
26 KOG0961 Predicted Zn2+-depende 99.6 2.8E-13 6.1E-18 154.1 26.3 405 740-1203 28-460 (1022)
27 PF00675 Peptidase_M16: Insuli 99.5 8.6E-13 1.9E-17 133.7 15.7 139 743-886 1-139 (149)
28 KOG2019 Metalloendoprotease HM 99.4 5.6E-11 1.2E-15 136.1 26.0 391 739-1198 60-496 (998)
29 PF08367 M16C_assoc: Peptidase 98.4 9.4E-07 2E-11 97.2 10.9 116 739-860 76-200 (248)
30 PF03410 Peptidase_M44: Protei 97.7 0.00033 7.2E-09 78.7 12.8 187 189-402 2-196 (590)
31 PHA03081 putative metalloprote 97.5 0.00097 2.1E-08 75.2 12.2 188 189-402 2-196 (595)
32 PF03410 Peptidase_M44: Protei 96.2 0.16 3.6E-06 57.9 16.1 184 736-946 2-193 (590)
33 PHA03081 putative metalloprote 95.9 0.15 3.3E-06 58.2 14.5 183 736-946 2-193 (595)
34 PF08367 M16C_assoc: Peptidase 89.5 2.2 4.7E-05 47.0 10.3 106 192-309 76-199 (248)
35 PF09851 SHOCT: Short C-termin 38.7 53 0.0012 23.1 3.6 24 1106-1129 6-30 (31)
36 KOG3859 Septins (P-loop GTPase 29.0 3.4E+02 0.0073 29.9 9.2 122 1042-1202 115-245 (406)
No 1
>PRK15101 protease3; Provisional
Probab=100.00 E-value=1.2e-69 Score=714.29 Aligned_cols=849 Identities=15% Similarity=0.140 Sum_probs=585.3
Q ss_pred CCcEEEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChh-------hHhhcCCeEEE
Q 000890 184 PKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKRE-------KLLGTGARSNA 256 (1237)
Q Consensus 184 p~~~~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~-------~l~~~G~~~na 256 (1237)
..++..+|+|||+|++++++..+. +.+.|+|++||.+||+++.|+|||+|||+|+||++|+ .++.+||++||
T Consensus 42 ~~~~~~~L~NGL~v~l~~~~~~~~-~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA 120 (961)
T PRK15101 42 RQYQAIRLDNGMTVLLVSDPQAVK-SLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGSHNA 120 (961)
T ss_pred cceEEEEeCCCCEEEEEeCCCCcc-eeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCCccc
Confidence 456778999999999999988776 5899999999999999999999999999999999995 25789999999
Q ss_pred EecCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhccC-hHHHHHHHHHHHhccCC
Q 000890 257 YTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNT-IEYRVDCQLLQHLHSEN 335 (1237)
Q Consensus 257 ~t~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~~-~~~~~~~~~~~~l~~~~ 335 (1237)
+|+.|+|+|++++++ ++++.+|++++|++.+|.|+++++++||++|++|+++..+ +..++...+...+|++|
T Consensus 121 ~T~~d~T~y~~~~~~-------~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~h 193 (961)
T PRK15101 121 STASYRTAFYLEVEN-------DALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAH 193 (961)
T ss_pred eECCCceEEEEEcCH-------HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCC
Confidence 999999999999998 7899999999999999999999999999999999998654 55556666666778766
Q ss_pred CCCCCCCCCCHHHhccc----CHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q 000890 336 KLSKRFPIGLEEQIKKW----DADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTPTSSA 411 (1237)
Q Consensus 336 ~~~~~~~~G~~~~i~~i----t~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~p~~ 411 (1237)
+|+ ++.+|++++|.++ ++++|++||++||+|+||+|+|+||++. +++.++++++|++|+++..+.+.. +.| .
T Consensus 194 p~~-~~~~G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~-~~l~~~~~~~F~~~~~~~~~~~~~-~~~-~ 269 (961)
T PRK15101 194 PGS-RFSGGNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQPL-PELAKLAADTFGRVPNKNASVPEI-TVP-V 269 (961)
T ss_pred Ccc-cCCCCCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCCCH-HHHHHHHHHHhccCCCCCCCCCCC-CCC-C
Confidence 655 7899999999998 6999999999999999999999999996 999999999999998765332210 011 0
Q ss_pred ccccccccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCcccccccCCCCCCCCCcccccHHHHHHHHHHHHHHH
Q 000890 412 FGAMANFLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSLSGSGADIPVNKVRTYGDLRNVLMKRIFLS 491 (1237)
Q Consensus 412 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ll~~l~~~ 491 (1237)
+ .| .....++.......+..+.+.|..|.....+.. ....+...++++...+
T Consensus 270 ~-------~~-----------------~~~~~~~~~~~~~~~~~l~l~~~~p~~~~~~~~----~~~~~l~~ll~~~~~g 321 (961)
T PRK15101 270 V-------TD-----------------AQKGIIIHYVPAQPRKVLRVEFRIDNNSAKFRS----KTDEYISYLIGNRSPG 321 (961)
T ss_pred C-------CH-----------------HHcCeEEEEEECCCCcEEEEEEecCCcHHHHhh----CHHHHHHHHhcCCCCC
Confidence 0 00 000000000111344567888888764321111 0112333444443334
Q ss_pred HHHHHHHHhhhcCCCCeeEeecccCccccccccEEEEEEEecCC---cHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 000890 492 ALHFRINTRYKSSNPPFTSVEMDHSDSGREGCTVTTLTVTAEPK---NWQSAVRVAVQEVRRLKEFGVTNGELTRYMDAL 568 (1237)
Q Consensus 492 ~l~~rl~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~---~~~~a~~~i~~el~~l~~~g~t~~EL~~ak~~l 568 (1237)
.|.++| +..|++|+++++++.....+.+.|.+++.+.++ +++++++.+.++|++++++|++++||+++|+.+
T Consensus 322 ~l~~~L-----~~~gla~~v~s~~~~~~~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~ 396 (961)
T PRK15101 322 TLSDWL-----QKQGLAEGISAGADPMVDRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVL 396 (961)
T ss_pred cHHHHH-----HHcCccceeeeccccccCCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 455444 356888998877653222234579999988774 789999999999999999999999999999998
Q ss_pred HHHHHHHHHhhccCCCchhhHHHHHhhcCCCcccChHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhcCCCCCCCCCceE
Q 000890 569 LKDSEHLAAMIDNISSVDNLDFIMESDALGHTVMDQRQGHASLVAVAGTITLEEVNSIGAEVLEFISDFGRPSAPVPAAI 648 (1237)
Q Consensus 569 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~~~~~~~~~~~ 648 (1237)
..++. + .+.....+....+...+ ...+...+......++.+++++|+++++. |. |+++.+
T Consensus 397 ~~~~~--~--~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~i~~~~~~-l~----------~~n~~i 456 (961)
T PRK15101 397 DLDFR--Y--PSITRDMDYIEWLADTM-----LRVPVEHTLDAPYIADRYDPKAIKARLAE-MT----------PQNARI 456 (961)
T ss_pred hcccc--C--CCCCChHHHHHHHHHHh-----hhCCHHHheeCchhhhcCCHHHHHHHHhh-cC----------HhHEEE
Confidence 65441 1 12222222223333332 12233445555677888999999888877 54 577888
Q ss_pred EEeccccccccCCCCccccCC----hHHHHHHHHcccCCCCCCCCcccCCccccchhHHHHHHhccCCCCCCCCCCCcce
Q 000890 649 VACVPKKVHIDGIGETEFKIS----PNEIVDAIKSGMEEPIEAEPELEVPKELISASELEELKLRCRPSFIPPRPELNVT 724 (1237)
Q Consensus 649 ~~~~P~~~~~~~~~~~~~~~s----~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~ 724 (1237)
+++.|+.........+...++ ++++.+.|... .+......|+ ...|+|..-.....
T Consensus 457 ~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~-----~~~~~l~lP~---------------~n~fip~~~~~~~~ 516 (961)
T PRK15101 457 WYISPQEPHNKTAYFVDAPYQVDKISEQTFADWQQK-----AQNIALSLPE---------------LNPYIPDDFSLIKA 516 (961)
T ss_pred EEEeCCCCCCccccccCCcceeecCCHHHHHHHhcC-----CCCccCCCCC---------------CCCccCCCCeeccC
Confidence 888886432111111111111 23333444321 0111111121 22344421111111
Q ss_pred ecccCCCCeEEEEecCCcEEEEEecCC--CCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHH
Q 000890 725 KVHDKESGITQLRLSNGIPINYKISKS--EAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFC 802 (1237)
Q Consensus 725 ~~~~~~~~i~~~~L~NGv~v~~~~~~~--~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~ 802 (1237)
. .....++.+.++||++|++++++. ..+.+.+.+.+.+|...+++...|++.++..++... ..++....
T Consensus 517 ~--~~~~~p~~i~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~~ll~~~-------l~e~~y~a 587 (961)
T PRK15101 517 D--KAYKHPELIVDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALNDYLAGLA-------LDQLSNQA 587 (961)
T ss_pred C--CCCCCCeEEEcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHHHHHHHH-------HHHHhchH
Confidence 0 111234678899999999998752 468999999999999888888999999988877432 23333334
Q ss_pred hcceeeeeeecCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHH
Q 000890 803 VNHLINCSLESTEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAM 882 (1237)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~ 882 (1237)
...|++++.. +.+.+. +++....++++.+|+++.+++.+|.|++++|+++|+.+++++++...+. .+........
T Consensus 588 ~~aG~~~~~~-~~~g~~--i~v~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l~~~~~~~--~~~~~~~~~~ 662 (961)
T PRK15101 588 SVGGISFSTN-ANNGLM--VNANGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQLDSAEKGK--AYEQAIMPAQ 662 (961)
T ss_pred HhcCcEEEEc-cCCCEE--EEEEecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhcccC--cHHHHHHHHH
Confidence 4456666665 466666 5666677899999999999999999999999999999999998755432 1222222111
Q ss_pred hcCCCCCC--CCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccC
Q 000890 883 LNGDERFV--EPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFR 960 (1237)
Q Consensus 883 ~~~~~~~~--~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~ 960 (1237)
...+++|. .++.+.|+++|.++|++||+++|.+.+++++|+||++.+++.++++++++.|+..... .........
T Consensus 663 ~~~~~py~~~~~~~~~l~~it~edl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l~~~~~~--~~~~~~~~~- 739 (961)
T PRK15101 663 MLSQVPYFERDERRKLLPSITLKDVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQKQLGADGTE--WWRGKDVVV- 739 (961)
T ss_pred HHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHHHHhccCCcc--cccccceEe-
Confidence 22345543 4688999999999999999999999999999999999999999999999888653211 000000000
Q ss_pred CCCCCCcceeEEecCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCc
Q 000890 961 PSPSDLHFQQVFLKDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPL 1040 (1237)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1237)
++ .............+..+.+.+..... .. .
T Consensus 740 -~~--~~~~~~~~~~~~~~~~~~~~~~~~g~---------------------------------------------~~-~ 770 (961)
T PRK15101 740 -DK--KQSVNFEKAGSSTDSALAAVYVPTGY---------------------------------------------DE-Y 770 (961)
T ss_pred -CC--CCeEEEecCCCCCCCeEEEEEEeCCC---------------------------------------------CC-H
Confidence 00 00011111111222333333311100 00 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEec---CcccHHHHHHHHHHHHHhhhhCCCC
Q 000890 1041 FFGITMGLLAEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTS---PPGKVHKAVDACKNVLRGLHSNRIV 1117 (1237)
Q Consensus 1041 ~~~~~~~lL~~~l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~---~p~~~~~~~~~~~~~l~~l~~~~it 1117 (1237)
...++..+|++++++|||.+||+++|++|+|++...... +.+.+.+.+.+ +|+.+++.++.+.+++.... .++|
T Consensus 771 ~~~v~~~lLg~~~ssrlf~~LRtk~qLgY~V~s~~~~~~--~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l-~~lt 847 (961)
T PRK15101 771 QSSAYSSLLGQIIQPWFYNQLRTEEQLGYAVFAFPMSVG--RQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKL-RAMK 847 (961)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhhceEEEEEeeccC--CeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHH-HhCC
Confidence 114567799999999999999999999999999866532 33444444433 45666666766666643322 3799
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHh-cCCCC
Q 000890 1118 QRELDRAKRTLLMRHEAEIKSNAYWLGLLA-HLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQL-RVDED 1189 (1237)
Q Consensus 1118 ~~ELe~aK~~l~~~~~~~~~s~~~~~~~l~-~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~-l~~~~ 1189 (1237)
++||+++|+.++.++....++....+..+. .+..++++ ++...++.+.|++||.+||++++++| +.++.
T Consensus 848 ~eE~~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~~~~~---fd~~~~~~~~i~~vT~edv~~~~~~~~~~~~~ 918 (961)
T PRK15101 848 PEEFAQYQQALINQLLQAPQTLGEEASRLSKDFDRGNMR---FDSRDKIIAQIKLLTPQKLADFFHQAVIEPQG 918 (961)
T ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCC---cChHHHHHHHHHcCCHHHHHHHHHHHhcCCCC
Confidence 999999999999999888888777776663 33334444 47788999999999999999999998 44444
No 2
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=7.4e-61 Score=618.50 Aligned_cols=908 Identities=12% Similarity=0.069 Sum_probs=588.1
Q ss_pred CCCCCCCcEEEEccCCcEEEEEECCCC--CceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChhh------Hhh-
Q 000890 179 ELPSHPKLYRGQLRNGLRYLILPNKVP--ASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK------LLG- 249 (1237)
Q Consensus 179 ~~~~~p~~~~~~L~NGl~v~~~~~~~~--~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~~------l~~- 249 (1237)
|......+...+.+||++|++++++.+ +. +.+.++|++|+ .+..|+||+||||+|+||++|+. ++.
T Consensus 85 ~e~~~~~~~~~H~~nGl~vl~~~~~d~~~~~-~~f~i~f~T~~----~d~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~ 159 (1119)
T PTZ00432 85 PDFGMVATVYSHKKTGLQVISLKTNDSSGKE-MCFDFYVPTPP----HNDKGIPHILEHSVLSGSKKYNYKDSFSLLVQG 159 (1119)
T ss_pred cccccEEEEEEEcCCCCEEEEEecCCCccce-eEEEEEecCCC----CCCcchhHHHHHHHhCCCCCCCcccHHHHHHhc
Confidence 555566778888999999999998664 34 37899999996 45799999999999999999972 444
Q ss_pred -cCCeEEEEecCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHH-----------HHH------------
Q 000890 250 -TGARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRV-----------EKE------------ 305 (1237)
Q Consensus 250 -~G~~~na~t~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~-----------~~e------------ 305 (1237)
+|+.+||+|+.|+|+|++++++ ++++..+|+++.|++++|.|+++++ +++
T Consensus 160 gl~~~lNA~T~~D~T~Y~~~~~~------e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~ 233 (1119)
T PTZ00432 160 GFNSFLNAYTFKDRTSYLFASTN------EKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGN 233 (1119)
T ss_pred CcCCCccccCCCCceEEEeccCC------HHHHHHHHHHHHHHHhCcCcccccchhhhhhhhcccccccccccccccccc
Confidence 4589999999999999999987 3579999999999999999998863 232
Q ss_pred --------HHHHHHHHHhcc-ChHHHHHHHHHHHhccCCCCCCCCCCCCHHHhcccCHHHHHHHHHhcccCCCcEEEEEc
Q 000890 306 --------RRAILSELQMMN-TIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVG 376 (1237)
Q Consensus 306 --------k~~v~~e~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~i~~it~e~l~~f~~~~y~p~n~~l~v~G 376 (1237)
|++|++||++.. ++..++.+.+.+.+| +++|+ ++++|++++|.++|.++|++||++||+|+||+|+++|
T Consensus 234 ~~~~~l~~kgVV~~Emk~~~~~p~~~~~~~~~~~lf-~~pY~-~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~G 311 (1119)
T PTZ00432 234 VHDRHVSYSGIVYSEMKKRFSDPLSFGYSVIYQNLF-SNVYK-YDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYG 311 (1119)
T ss_pred ccccccchhhHHHHHHHHhhCCHHHHHHHHHHHHHh-CCCCC-CCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEc
Confidence 899999999875 566667778788899 76665 6899999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCc
Q 000890 377 DIDNVSKTIDQIEAVFGHTGNENETASASTPTSSAFGAMANFLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPV 456 (1237)
Q Consensus 377 di~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 456 (1237)
|++. ++++++++++|+.+++.....+...+.++. ...|.. ..... .....+.+...+..+..+
T Consensus 312 did~-~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~---------~~~v~~~~~~~~~e~~~l 374 (1119)
T PTZ00432 312 PNDV-TERLEFVDNYLTKHPKTGQLSHTAYREDAD------ENLLYE-EYKDK---------PKHVKKKFSSHSEEEENL 374 (1119)
T ss_pred CCCH-HHHHHHHHHHHhhccccccccccccccccc------cccccc-ccccC---------CeEEEeccCCCccccccE
Confidence 9996 999999999999887653211100000000 000000 00000 000000000111223445
Q ss_pred ccc-cccCCCCC---CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCeeEe-ecccCccccccccEEEEEEE
Q 000890 457 EHN-WSLSGSGA---DIPVNKVRTYGDLRNVLMKRIFLSALHFRINTRYKSSNPPFTSV-EMDHSDSGREGCTVTTLTVT 531 (1237)
Q Consensus 457 ~~~-~~~p~~~~---~~~~~~~~~~~~l~~~ll~~l~~~~l~~rl~~~l~~~~~~~~~~-~~~~~~~g~~~~~~~~i~~~ 531 (1237)
.++ |.++.... +......+....+.-.++..++.+...++|++.+++ .|+++++ +.++..... .+.|.+.+.
T Consensus 375 ~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~lLggg~sS~L~q~LrE-~GLa~svv~~~~~~~~~--~~~f~I~l~ 451 (1119)
T PTZ00432 375 MSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNYLLLGTPESVLYKALID-SGLGKKVVGSGLDDYFK--QSIFSIGLK 451 (1119)
T ss_pred EEEEEEcCCccccccccccccCCHHHHHHHHHHHHHHcCCCccHHHHHHHh-cCCCcCCCcCcccCCCC--ceEEEEEEE
Confidence 554 98742210 000000111233444556666666667777777885 5787775 334433332 246777764
Q ss_pred -ecC-------CcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCCchhhHHHHHhhcCCCcccC
Q 000890 532 -AEP-------KNWQSAVRVAVQEVRRLKEFGVTNGELTRYMDALLKDSEHLAAMIDNISSVDNLDFIMESDALGHTVMD 603 (1237)
Q Consensus 532 -~~~-------~~~~~a~~~i~~el~~l~~~g~t~~EL~~ak~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 603 (1237)
+.. ++++++.+.|.++|++++++||++++|+++++++..++ ..........++. ++..+...|.+++
T Consensus 452 g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef~~----rE~~~~~~p~gl~-~~~~~~~~~~~g~ 526 (1119)
T PTZ00432 452 GIKETNEKRKDKVHYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEFVM----KELNLGTYPKGLM-LIFLMQSRLQYGK 526 (1119)
T ss_pred cCChHhccchhhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh----hhccCCCCCcHHH-HHHHHHHHHhcCC
Confidence 442 34789999999999999999999999999999986543 2111111111222 2333444444433
Q ss_pred hHHH-------HHHHHHHhCCCCHHHHHHHHHHHHHhhhcCCCCCCCCCceEEEecccc--ccccCC--------CCccc
Q 000890 604 QRQG-------HASLVAVAGTITLEEVNSIGAEVLEFISDFGRPSAPVPAAIVACVPKK--VHIDGI--------GETEF 666 (1237)
Q Consensus 604 ~~~~-------~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~~~~~~~~~~~~~~~P~~--~~~~~~--------~~~~~ 666 (1237)
++.. ++.+.+.+ .-+...++.++++||- + ++|.+++++.|++ .+.+.. .....
T Consensus 527 dp~~~l~~~~~l~~lr~~~-~~~~~y~e~Li~k~ll--------~-N~h~~~v~~~p~~s~~~~~~~~~~e~~~L~~~~~ 596 (1119)
T PTZ00432 527 DPFEILRFEKLLNELKLRI-DNESKYLEKLIEKHLL--------N-NNHRVTVHLEAVESSKYEKEFNKLVKDELKERLS 596 (1119)
T ss_pred CHHHHHhhHHHHHHHHHHH-hcccHHHHHHHHHHcc--------C-CCeeeEEEEecCCcccHHHHHHHHHHHHHHHHHH
Confidence 2222 33333333 2234679999999885 1 4678888888886 332221 23456
Q ss_pred cCChHHHHHHHHcccCCCCCCCCcccCCcccc---chhHHHHHHhccCCCCCCCCCCCcceecccCCCCeEEEEecCCcE
Q 000890 667 KISPNEIVDAIKSGMEEPIEAEPELEVPKELI---SASELEELKLRCRPSFIPPRPELNVTKVHDKESGITQLRLSNGIP 743 (1237)
Q Consensus 667 ~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~l~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~i~~~~L~NGv~ 743 (1237)
.++++++.+++++. +.++.+++.+.+++.+ +...+.++... ..+.|.......... ...+.......+|++
T Consensus 597 ~Ls~ee~~~i~~~~--~~l~~~q~~~~~~e~l~~lP~l~~~DI~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 670 (1119)
T PTZ00432 597 HLTKEQVDEMEKAY--EKFKKEREADDDPEHLDSFPILSLSDLNKE--TEEIPTKLYKLSSDS--LKENMDLDSDGGSVT 670 (1119)
T ss_pred hCCHHHHHHHHHHH--HHHHHHhcCCCChhHHhhcCCCcHHHcCCc--ccCCcchhhhccccc--ccccccccccCCCcc
Confidence 78899998888766 3455566555554432 22222222100 000010000000000 000001113457999
Q ss_pred EEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcce--eeee--eecCc----
Q 000890 744 INYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHL--INCS--LESTE---- 815 (1237)
Q Consensus 744 v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~--~~~~--~~~~~---- 815 (1237)
|++++. .+++++|+.+.|+.... +.+...++.++..++.+.| +++++++|+...+.... ++++ +.+..
T Consensus 671 ~~~~~~-~TnGi~y~~~~fdl~~l--~~e~~~yl~L~~~~l~~~g-T~~~s~~el~~~i~~~tGg~~~~~~~~~~~~~~~ 746 (1119)
T PTZ00432 671 VLVHPI-ESRGILYLDFAFSLDSL--TVDELKYLNLFKALLKENG-TDKLSSEEFTYKREKNLGGLSASTAFYSETNNLT 746 (1119)
T ss_pred eEEEec-CCCCeEEEEEEecCCCC--CHHHHhhHHHHHHHHHhcC-CCCCCHHHHHHHHHHhCCCeEEEEEEeccccccc
Confidence 998876 46899999999998764 4567888899998998876 89999999988766333 3332 22221
Q ss_pred --c----eEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHH-HHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCC
Q 000890 816 --E----FIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDA-FDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDER 888 (1237)
Q Consensus 816 --~----~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~-~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 888 (1237)
+ ...+.+++.++.++++.+++|+.+++.++.|++.+ +..+.++.++.+.+...+.++.++.....+.+.....
T Consensus 747 ~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~~~~~~~~Gh~~A~~~~~s~~S~~~~ 826 (1119)
T PTZ00432 747 YDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGMKTVFSSKGHKFALKRMKSKFSVSDY 826 (1119)
T ss_pred cCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcCCHHHH
Confidence 1 23466889999999999999999999999998764 6666666666666665555666665444332221111
Q ss_pred -----CCCCCH------------hHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCC-HHHHHHHHHHhhcccCCCCCC--
Q 000890 889 -----FVEPTP------------KSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFS-EEEIESCILDYLGTVRATNDS-- 948 (1237)
Q Consensus 889 -----~~~~t~------------~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d-~~~v~~li~~~~g~l~~~~~~-- 948 (1237)
.++... +....+ .+.|.+++++.|..+|+.+.|+||.+ .+.+.+.+..++..++.....
T Consensus 827 ~~e~~~G~~~~~fl~~l~~~~~e~~~~~v-~~~L~~i~~~i~~~~~l~~~vt~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 905 (1119)
T PTZ00432 827 ADELVNGYSQLLFLKETLVPLAEKDWSKV-ESKLNEIRNKLLSMKNLTVNVTGDSELLDSLLDDSTTFLKKLSSTFKEND 905 (1119)
T ss_pred HHHHhcCHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHhCcCCcEEEEEeCHHHHHHHHHHHHHHHHhccccccccc
Confidence 111111 122233 45678888889999999999999996 677778777888877532100
Q ss_pred --CCcCccCCcccCCC-CCCCcceeEEecCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhh
Q 000890 949 --KREHEYSPILFRPS-PSDLHFQQVFLKDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLK 1025 (1237)
Q Consensus 949 --~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1237)
.....+....+... .........+..+. .-.++..+++.
T Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~p~-~V~yv~~~~~~------------------------------------- 947 (1119)
T PTZ00432 906 NKSSDKVWVKEVLDKKLMESVDKNEFIVLPT-RVNFVGMGGKL------------------------------------- 947 (1119)
T ss_pred ccccccccccccccccccCCcccceEEEccC-ceeEEEEeccc-------------------------------------
Confidence 00000100000000 00000112222111 11112222211
Q ss_pred hhhhHHhhhhhcCCchHHHHHHHHHHHHH-HHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEecCcccHHHHHHHH
Q 000890 1026 DIEKDQQRKLRSHPLFFGITMGLLAEIIN-SRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTSPPGKVHKAVDAC 1104 (1237)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~lL~~~l~-srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~ 1104 (1237)
..+++.....+.||..+|+ ++||++||+ +|+|||+++.+. ..|.|.+++++|| ++.++++.+
T Consensus 948 ----------~~~~~~~~~~l~Vl~~~L~~~yLw~~IR~-~GGAYG~~~~~~-----~~G~~~f~SYRDP-n~~~Tl~~f 1010 (1119)
T PTZ00432 948 ----------FDKSDKVDGSFQVIVHYLKNSYLWKTVRM-SLGAYGVFADLL-----YTGHVIFMSYADP-NFEKTLEVY 1010 (1119)
T ss_pred ----------ccCCCccCHHHHHHHHHHccccchHHHcc-cCCccccCCccC-----CCCeEEEEEecCC-CHHHHHHHH
Confidence 0111111346678888885 899999999 899999997543 3599999999999 799999999
Q ss_pred HHHHHhhhh--CCCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHH
Q 000890 1105 KNVLRGLHS--NRIVQRELDRAKRTLLMRHEAEIKSNAYWLGLLAHLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYE 1182 (1237)
Q Consensus 1105 ~~~l~~l~~--~~it~~ELe~aK~~l~~~~~~~~~s~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~ 1182 (1237)
.++.+.+++ ..+|++||++++...+++++.+ .++..........+..+.+. +..+++++.+.++|++||+++|+
T Consensus 1011 ~~~~~~l~~~~~~~~~~~l~~~iig~~~~~D~p-~~p~~~g~~~~~~~l~g~t~---e~rq~~R~~il~~t~edi~~~a~ 1086 (1119)
T PTZ00432 1011 KEVASALREAAETLTDKDLLRYKIGKISNIDKP-LHVDELSKLALLRIIRNESD---EDRQKFRKDILETTKEDFYRLAD 1086 (1119)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCC-CChHHHHHHHHHHHHcCCCH---HHHHHHHHHHHcCCHHHHHHHHH
Confidence 999999998 5699999999999999998875 35544444444455667664 88899999999999999999999
Q ss_pred HhcCC-CCceEEEEeecCCCCCC
Q 000890 1183 QLRVD-EDSLYSCIGIAGAQAGD 1204 (1237)
Q Consensus 1183 ~~l~~-~~~~~~vvG~~~~~~~~ 1204 (1237)
+|... ....+||+|+.+.+...
T Consensus 1087 ~~~~~~~~~~~~v~g~~~~~~~~ 1109 (1119)
T PTZ00432 1087 LMEKSKEWEKVIAVVNSKTSDTA 1109 (1119)
T ss_pred HHHhhhccCeEEEEECHHHhhhc
Confidence 99753 33568899998765553
No 3
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=100.00 E-value=5.3e-58 Score=545.88 Aligned_cols=867 Identities=15% Similarity=0.159 Sum_probs=577.1
Q ss_pred CCCcEEEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChhh------H--hhcCCeE
Q 000890 183 HPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK------L--LGTGARS 254 (1237)
Q Consensus 183 ~p~~~~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~~------l--~~~G~~~ 254 (1237)
.-.+.-.+-++|++++.+.++++.+ .+.+.|+ ++|.+..|+||.|||++||||++||. + .+++..+
T Consensus 19 ~~~~~~~H~~TGa~l~hi~~~d~~~--vFsi~F~----T~p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~ 92 (978)
T COG1026 19 SKGYILEHEKTGAELAHIKNEDPNN--VFSIAFK----TEPHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFL 92 (978)
T ss_pred ceeEEEeeccCCceEEEecCCCcCc--eEEEEee----cCCCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHH
Confidence 3345556667999999999997776 3566665 78999999999999999999999972 2 3567789
Q ss_pred EEEecCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHH--------------HHHHHHHHHhcc-Ch
Q 000890 255 NAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKE--------------RRAILSELQMMN-TI 319 (1237)
Q Consensus 255 na~t~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~e--------------k~~v~~e~~~~~-~~ 319 (1237)
||+|+.|.|+|.+++.. ++++-++|+++.|.+++|.+.++.|.+| ++||++||++.. +.
T Consensus 93 NA~T~~D~T~YP~sS~~------~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~ 166 (978)
T COG1026 93 NAFTFPDKTVYPASSAN------EKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSG 166 (978)
T ss_pred hhccCCCcceeeccccC------cchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCc
Confidence 99999999999999987 4899999999999999999999999887 799999999964 66
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCHHHhcccCHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHH-hcCCCCC
Q 000890 320 EYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAV-FGHTGNE 398 (1237)
Q Consensus 320 ~~~~~~~~~~~l~~~~~~~~~~~~G~~~~i~~it~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~-f~~~~~~ 398 (1237)
.+.+++.+.+.+|+++.|+ ..++|.+..|..+|.|++++||++||+|+|+.++++||++. ++.++.|++. |......
T Consensus 167 ~~~~~~~~~~slfp~~ty~-~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~-~~~L~~iee~~l~~~~k~ 244 (978)
T COG1026 167 ESVLSRAMQQSLFPGTTYG-VNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPT-ERLLDFIEEKVLRPFGKR 244 (978)
T ss_pred hhHHHHHHHHhhCCCcccc-ccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCCCH-HHHHHHHHHhhhcccccc
Confidence 7778889999999999998 57999999999999999999999999999999999999995 9999999886 6666554
Q ss_pred CCCCCCCCCCCccccccccccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCcccccccCCCCCCCCCcccccHH
Q 000890 399 NETASASTPTSSAFGAMANFLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSLSGSGADIPVNKVRTYG 478 (1237)
Q Consensus 399 ~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 478 (1237)
....+. +...+| ..|... .. ...+.+...+..+..+.+.|.++...+. ..
T Consensus 245 ~~~~~i--~~~~~~------~~~~~~-------~~-------~ypi~~~~~de~q~~~~lsWl~~~~~d~--------~~ 294 (978)
T COG1026 245 ELDVPI--PDQKAF------KKPRRK-------VL-------EYPISFDEEDEDQGLLSLSWLGGSASDA--------ED 294 (978)
T ss_pred ccCCCC--Cccccc------Cccccc-------ce-------eeccCCCCCCCceeEEEEEEecCCcccH--------HH
Confidence 322221 111111 111100 00 0000011122345567889999876532 22
Q ss_pred HHHHHHHHHHH----HHHHHHHHHHhhhcCCCCeeEeecccCccccccccEEEEEE-EecCCcHHHHHHHHHHHHHHHHH
Q 000890 479 DLRNVLMKRIF----LSALHFRINTRYKSSNPPFTSVEMDHSDSGREGCTVTTLTV-TAEPKNWQSAVRVAVQEVRRLKE 553 (1237)
Q Consensus 479 ~l~~~ll~~l~----~~~l~~rl~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~i~~-~~~~~~~~~a~~~i~~el~~l~~ 553 (1237)
.++-.++..++ .+.|.++| +.++.| +..++..|.+.-... .|.+.+ ++..++.++..+.|+.+|+.+++
T Consensus 295 ~lal~vL~~iLl~~~asPl~~~l---iesglg-~~~~~g~~~~~~~~~--~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~ 368 (978)
T COG1026 295 SLALEVLEEILLDSAASPLTQAL---IESGLG-FADVSGSYDSDLKET--IFSVGLKGVSEEKIAKLKNLVLSTLKELVK 368 (978)
T ss_pred HHHHHHHHHHHccCcccHHHHHH---HHcCCC-cccccceecccccee--EEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33333344433 34555554 334444 333333244333322 344443 67778999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhhccCCCchhhHHHHHhhcCCCcccChHHH---HHHHHHHhCC-CCHH-HHHHHHH
Q 000890 554 FGVTNGELTRYMDALLKDSEHLAAMIDNISSVDNLDFIMESDALGHTVMDQRQG---HASLVAVAGT-ITLE-EVNSIGA 628 (1237)
Q Consensus 554 ~g~t~~EL~~ak~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~-vT~e-dv~~~a~ 628 (1237)
+||+.+.++.+++++.-+++.. .++..++ .++.....+|..++.+.. +..+.+.|++ +... .++++++
T Consensus 369 ~gi~~~~ie~~~~q~E~s~ke~------~s~pfgl-~l~~~~~~gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ 441 (978)
T COG1026 369 NGIDKKLIEAILHQLEFSLKEV------KSYPFGL-GLMFRSLYGWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIR 441 (978)
T ss_pred hcCCHHHHHHHHHHHHHhhhhh------cCCCccH-HHHHHhccccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHH
Confidence 9999999999999997654322 2333333 356667788888764332 2233333332 3333 3999999
Q ss_pred HHHHhhhcCCCCCCCCCceEEEeccccccccCCC--------CccccCChHHHHHHHHcccCCCCCCCCcccCCccccch
Q 000890 629 EVLEFISDFGRPSAPVPAAIVACVPKKVHIDGIG--------ETEFKISPNEIVDAIKSGMEEPIEAEPELEVPKELISA 700 (1237)
Q Consensus 629 ~~l~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~--------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 700 (1237)
+||- + ++|.+++++.|+....+... .....+++++++++++.. ..++..|+.+.|++++..
T Consensus 442 ky~l---~------N~h~~~v~~~Ps~~~~~~~ekee~e~L~~~~~~l~de~~~ki~~~~--~~lke~Q~~~dse~~~~~ 510 (978)
T COG1026 442 KYFL---D------NPHYVTVIVLPSPELEEKLEKEERELLQKRSSELTDEDLEKIIKDS--KKLKERQDQPDSEEDLAT 510 (978)
T ss_pred HHhh---c------CCccEEEEEecChHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH--HHHHHhhcCCCchhhhhh
Confidence 9986 1 35789999999876554442 223446677777666654 234444545544433221
Q ss_pred hHHHHHHhccCCCCCCCCCCCcceecccCCCCeEEEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHH
Q 000890 701 SELEELKLRCRPSFIPPRPELNVTKVHDKESGITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVG 780 (1237)
Q Consensus 701 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~i~~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~ 780 (1237)
+|.....++++.. ++. ..+..-.|..+|+.++. .++++++++++++.+.. +.+...++.++
T Consensus 511 --------------lP~l~~~dvp~~~-~k~-~l~~~~~~~~~v~~~~~-~tn~i~yl~~~~~~~~l--~~~llpyL~L~ 571 (978)
T COG1026 511 --------------LPTLKLGDVPDPI-EKT-SLETEVSNEAKVLHHDL-FTNGITYLRLYFDLDML--PSELLPYLPLF 571 (978)
T ss_pred --------------ccccchhcCCCcc-ccc-ceeeeccCCcceEEeec-CCCCeEEEEEEeecCCC--ChhhhhhHHHH
Confidence 2222222222211 111 23345678888988775 56899999999999653 55677888888
Q ss_pred HHHHhcCCcCCCCCHHHHHHHHh----cceeeeeeecC-----cceEEEEEEEecCcchHHHHHHHHHHHHhcCCC-CHH
Q 000890 781 VRTLSEGGRVGKFSREQVELFCV----NHLINCSLEST-----EEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVW-LDD 850 (1237)
Q Consensus 781 ~~~l~~gg~~~~~s~~el~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f-~~~ 850 (1237)
...+.+.| ++++++.++...+. +..+++++.++ .....+.+++.+..++++++++++.+++.++.| |.+
T Consensus 572 ~~~l~~lg-t~~~~y~e~~~~i~~~TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~ 650 (978)
T COG1026 572 AFALTNLG-TETYSYKELLNQIERHTGGISVSLSVDTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRE 650 (978)
T ss_pred HHHHHhcC-CCCcCHHHHHHHHHHHhCCceeeEeeccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHH
Confidence 88888877 89999998887655 33333333332 223456689999999999999999999999999 555
Q ss_pred HHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCC--C---CCCCHhHHhhcC-----------HHHHHHHHHhhcc
Q 000890 851 AFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDER--F---VEPTPKSLENLN-----------LKSVKEAVMNQFV 914 (1237)
Q Consensus 851 ~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~---~~~t~~~l~~lt-----------~e~l~~~~~~~~~ 914 (1237)
.+..+.++.++.+.+...+.++.++.....+.++.... + ++.-.+-|+.+. .+.|++.+++.+.
T Consensus 651 Rlkell~q~~~~l~~~vr~sG~~~A~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~ 730 (978)
T COG1026 651 RLKELLEQYLSDLTSSVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQ 730 (978)
T ss_pred HHHHHHHHHHhhhHHhhhccchHHHHHHhhcccccchhHHHHhcChhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhh
Confidence 55555555555555555554566666555443332221 1 111122222221 3567888888888
Q ss_pred CCCeEEEEEcCCCHHHHHHHHHHhhcccCCC-C-CCCCcCccCCcccCCCCCCCcceeEEecCCccceeEEEecCCCCCC
Q 000890 915 GNNMEVSIVGDFSEEEIESCILDYLGTVRAT-N-DSKREHEYSPILFRPSPSDLHFQQVFLKDTDERACAYIAGPAPNRW 992 (1237)
Q Consensus 915 ~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~i~~~~~~~~ 992 (1237)
.+|+.++|.|+.+. +.+.+++-|-.+... . ....+.......+.... . ....++.+.+. +...++++.
T Consensus 731 ~~n~~i~i~~~~~~--~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~ii~~p~-a~~~l~fs~---- 800 (978)
T COG1026 731 TNNLRIAIIGDIDK--ILDLLENPLLKFLEHLLPGFELPTPPKNPHLDLIS--S-LSEATIIPSPV-AYNALAFSI---- 800 (978)
T ss_pred cCceEEEEecChhh--hHHHHHHHhhhhhcccCcccccCCCCCCcchhhhc--c-ccceEEeccHH-HHHHHhhhc----
Confidence 89998999999872 222233333222210 0 00000011111110000 0 01112222221 111122211
Q ss_pred CcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCchHHHHHHHHHHHHH-HHHHHHHHhhcCCeeeE
Q 000890 993 GFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPLFFGITMGLLAEIIN-SRLFTTVRDSLGLTYDV 1071 (1237)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~l~-srL~~~lRe~~GlaYsv 1071 (1237)
......||++ .++.+|+.+++ .+||.+||+ +|+|||+
T Consensus 801 ---------------------------------------~~~~y~hpd~--~~l~vls~~L~~~~lw~~IR~-~GGAYGa 838 (978)
T COG1026 801 ---------------------------------------GGLPYTHPDY--AALQVLSEYLGSGYLWNKIRE-KGGAYGA 838 (978)
T ss_pred ---------------------------------------cCCCCCCccc--hHHHHHHHHhccchhHHHHHh-hcccccc
Confidence 1144578886 45677888775 899999999 8999999
Q ss_pred eeeeeccccCCceEEEEEEecCcccHHHHHHHHHHHHHhhhhCCCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhc
Q 000890 1072 SFELNLFDRLKLGWYVISVTSPPGKVHKAVDACKNVLRGLHSNRIVQRELDRAKRTLLMRHEAEIKSNAYWLGLLAHLQA 1151 (1237)
Q Consensus 1072 ~~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~it~~ELe~aK~~l~~~~~~~~~s~~~~~~~l~~~~~ 1151 (1237)
+++.+. ..|.|.+++++|| ++-++++.+++.++.+.++.++++|+++++-.+++..... +++......-.....
T Consensus 839 ~as~~~----~~G~f~f~sYRDP-n~~kt~~v~~~~v~~l~s~~~~~~d~~~~ilg~i~~~d~p-~sp~~~~~~s~~~~~ 912 (978)
T COG1026 839 SASIDA----NRGVFSFASYRDP-NILKTYKVFRKSVKDLASGNFDERDLEEAILGIISTLDTP-ESPASEGSKSFYRDL 912 (978)
T ss_pred cccccc----CCCeEEEEecCCC-cHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcccccc-cCCcceehhhHHHHH
Confidence 998664 5799999999999 6889999999999999999999999999999999887753 455433332222233
Q ss_pred CCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCC--CCceEEEEeec
Q 000890 1152 SSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVD--EDSLYSCIGIA 1198 (1237)
Q Consensus 1152 ~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~--~~~~~~vvG~~ 1198 (1237)
.++.. +..+.+++++.+||.+||.+++++|+.+ ....++++|..
T Consensus 913 sg~~~---~~~qa~re~~l~vt~~di~~~~~~yl~~~~~e~~i~~~~~~ 958 (978)
T COG1026 913 SGLTD---EERQAFRERLLDVTKEDIKEVMDKYLLNFSSENSIAVFAGE 958 (978)
T ss_pred hcCCH---HHHHHHHHHHhcCcHHHHHHHHHHHHhcccccceEEEEech
Confidence 45443 7778999999999999999999999874 55567777763
No 4
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.4e-55 Score=486.55 Aligned_cols=859 Identities=15% Similarity=0.144 Sum_probs=592.3
Q ss_pred CCCCCCCcEEEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChhh------H--hhc
Q 000890 179 ELPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK------L--LGT 250 (1237)
Q Consensus 179 ~~~~~p~~~~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~~------l--~~~ 250 (1237)
|......+.-.+-+.|.+|+.+.+++..++ ++|.| +..|++..|+.|+|||..+|||.+||. | .++
T Consensus 47 pEl~l~av~lkH~~Tgae~lhl~reD~N~v--FsI~F----rTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSL 120 (998)
T KOG2019|consen 47 PELKLTAVLLKHKKTGAEVLHLDREDENNV--FSIVF----RTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSL 120 (998)
T ss_pred hhhhhhheeeeecCCCceeEeeccCCCCce--eEEEe----ecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHH
Confidence 444555666677789999999999888773 55555 577889999999999999999999972 2 245
Q ss_pred CCeEEEEecCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHH------------------HHHHHHH
Q 000890 251 GARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKE------------------RRAILSE 312 (1237)
Q Consensus 251 G~~~na~t~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~e------------------k~~v~~e 312 (1237)
...+||+|..|+|.|.+++.+ .+++.++.+++.|..+.|.+...+|.+| |++|++|
T Consensus 121 atFmNAfT~pD~T~yPfattN------~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNE 194 (998)
T KOG2019|consen 121 ATFMNAFTAPDYTFYPFATTN------TKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNE 194 (998)
T ss_pred HHHHhhccCCCcceeecccCC------hHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeec
Confidence 667999999999999999887 4889999999999999999999999998 8999999
Q ss_pred HHhc-cChHHHHHHHHHHHhccCCCCCCCCCCCCHHHhcccCHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHH
Q 000890 313 LQMM-NTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAV 391 (1237)
Q Consensus 313 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~i~~it~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~ 391 (1237)
|++. .++.+.....+.+++|+++.|+. .++|++-.|..+|.++|++||++||+|+||.++.+||++ +++.+.++++.
T Consensus 195 MKG~~S~~~~if~~~~Qq~L~p~~tYgv-~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~P-l~~~l~~l~e~ 272 (998)
T KOG2019|consen 195 MKGQYSDPDYIFGMLFQQALFPENTYGV-NSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFP-LEDLLKQLEED 272 (998)
T ss_pred ccccccChhHHHHHHHHHhhCccccccc-cCCCCcccCccccHHHHHHHHHhccCCCcceeEeecCch-HHHHHHHHHHh
Confidence 9986 45666677788889999999985 689999999999999999999999999999999999999 59999999988
Q ss_pred hcCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCcccccccCCCCCCCCC
Q 000890 392 FGHTGNENETASASTPTSSAFGAMANFLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSLSGSGADIPV 471 (1237)
Q Consensus 392 f~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 471 (1237)
|....+....... +.+. .|..|+.-+ ..+. .+. +..+..|....+.|..+..
T Consensus 273 ~~~~sk~~~s~kv--~~qk------~f~kp~rvv-e~~p--------~d~-----~~~p~Kq~~~s~s~L~~~p------ 324 (998)
T KOG2019|consen 273 FSPFSKRELSSKV--TFQK------LFDKPRRVV-EKGP--------ADP-----GDLPKKQTKCSNSFLSNDP------ 324 (998)
T ss_pred hcccccccccCcc--cccc------ccccCceee-eecC--------CCC-----CCCccceeEEEEEeecCCc------
Confidence 8777654433322 1111 112222100 0000 000 1122334445556655432
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCeeEeecccCccccccccEEEEEE-EecCCcHHHHHHHHHHHHH
Q 000890 472 NKVRTYGDLRNVLMKRIFLSALHFRINTRYKS-SNPPFTSVEMDHSDSGREGCTVTTLTV-TAEPKNWQSAVRVAVQEVR 549 (1237)
Q Consensus 472 ~~~~~~~~l~~~ll~~l~~~~l~~rl~~~l~~-~~~~~~~~~~~~~~~g~~~~~~~~i~~-~~~~~~~~~a~~~i~~el~ 549 (1237)
.+++..+.-.+++.++.+..++-+++.+.+ +.|.-.+++++|.+....+ .|++.. ++..++++.+.+.|...++
T Consensus 325 --~d~~etfaL~~L~~Ll~~gpsSp~yk~LiESGLGtEfsvnsG~~~~t~~~--~fsVGLqGvseediekve~lV~~t~~ 400 (998)
T KOG2019|consen 325 --LDTYETFALKVLSHLLLDGPSSPFYKALIESGLGTEFSVNSGYEDTTLQP--QFSVGLQGVSEEDIEKVEELVMNTFN 400 (998)
T ss_pred --hhHHHHHHHHHHHHHhcCCCccHHHHHHHHcCCCcccccCCCCCcccccc--eeeeeeccccHHHHHHHHHHHHHHHH
Confidence 245555666666666665555555555544 4555677889998877654 677665 6677899999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCCchhhHHHHHhhcCCCcccChH-------HHHHHHHHHhCCCCHHH
Q 000890 550 RLKEFGVTNGELTRYMDALLKDSEHLAAMIDNISSVDNLDFIMESDALGHTVMDQR-------QGHASLVAVAGTITLEE 622 (1237)
Q Consensus 550 ~l~~~g~t~~EL~~ak~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~vT~ed 622 (1237)
++++.||+.+.+++..+++.-++. ++... .++ .++.++...|.+..++ +.++.+.+.++.-...-
T Consensus 401 ~lae~gfd~drieAil~qiEislk------~qst~-fGL-~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~l 472 (998)
T KOG2019|consen 401 KLAETGFDNDRIEAILHQIEISLK------HQSTG-FGL-SLMQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKL 472 (998)
T ss_pred HHHHhccchHHHHHHHHHhhhhhh------ccccc-hhH-HHHHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhH
Confidence 999999999999999998864432 22222 343 3456666667655322 23445555665546677
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCceEEEeccccccccCCC--------CccccCChHHHHHHHHcccCCCCCCCCcccCC
Q 000890 623 VNSIGAEVLEFISDFGRPSAPVPAAIVACVPKKVHIDGIG--------ETEFKISPNEIVDAIKSGMEEPIEAEPELEVP 694 (1237)
Q Consensus 623 v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~--------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p 694 (1237)
++.++++|+. | +.|+.++.+.|+.++.+... +....++++++.++.+++.. +...|+ .|
T Consensus 473 fq~lIkkYil--------n-n~h~~t~smqpd~e~~~~~~~eE~tkL~ek~~alteeD~~ei~k~~~e--L~~kQ~--tp 539 (998)
T KOG2019|consen 473 FQPLIKKYIL--------N-NPHCFTFSMQPDPEFAEKLEQEEATKLEEKKAALTEEDLAEIAKAGEE--LREKQS--TP 539 (998)
T ss_pred HHHHHHHHHh--------c-CCceEEEEecCCchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH--HHHhhC--Cc
Confidence 8999999986 1 46788888999876544432 23345666666666655421 111110 01
Q ss_pred ccccchhHHHHHHhccCCCCCCCCCCCcceecccCCCCeEEEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccc
Q 000890 695 KELISASELEELKLRCRPSFIPPRPELNVTKVHDKESGITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESR 774 (1237)
Q Consensus 695 ~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~i~~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~ 774 (1237)
++..| +|.....+|.+..+ ..+ ..+..-||++|..+.. ++++++|+++.+..|+. +.+..
T Consensus 540 --------------~dlsC-lPtL~vsDIp~~~~-~~~-~~v~dingvkv~~~dl-~tngi~Y~r~~~~l~~~--p~eL~ 599 (998)
T KOG2019|consen 540 --------------EDLSC-LPTLNVSDIPKTIP-YTK-LEVGDINGVKVQRCDL-FTNGITYTRVVFDLNSL--PEELL 599 (998)
T ss_pred --------------ccccc-ccccccccCCCCCC-ccc-eeeeeccCceeEEeec-cCCceEEEEEeeccccC--cHHhh
Confidence 11222 34444444443321 122 2445679999998876 56899999999999984 55677
Q ss_pred hhhHHHHHHHhcCCcCCCCCHHHHHHHHh--cceeeeeeecC------cceEEEEEEEecCcchHHHHHHHHHHHHhcCC
Q 000890 775 GAVIVGVRTLSEGGRVGKFSREQVELFCV--NHLINCSLEST------EEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSV 846 (1237)
Q Consensus 775 G~a~l~~~~l~~gg~~~~~s~~el~~~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~ 846 (1237)
.+..++...+.+.| ++..+..|+++.+. ..|++++..+. .....+.+...+...+++.+++|++.++.++.
T Consensus 600 PylPlfc~sll~lG-t~~lsf~el~qqI~rkTGGiS~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~ 678 (998)
T KOG2019|consen 600 PYLPLFCQSLLNLG-TGDLSFVELEQQIGRKTGGISVSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETC 678 (998)
T ss_pred cchHHHHHHHHhcC-CCcccHHHHHHHhhhhcCceeecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccC
Confidence 88888777777766 79999999998866 44555544321 12233557788888899999999999999999
Q ss_pred CCHH-HHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCC--CCCCCHh--------------HHhhcCHHHHHHHH
Q 000890 847 WLDD-AFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDER--FVEPTPK--------------SLENLNLKSVKEAV 909 (1237)
Q Consensus 847 f~~~-~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~t~~--------------~l~~lt~e~l~~~~ 909 (1237)
|.+. .|+....+..+.+.+...+.++.+|...+.+++..... -..+-.+ +++.+ .+.|.++.
T Consensus 679 f~n~dkfkvlvk~s~s~~~n~i~dsGH~~A~~rs~a~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i-~~kL~eIr 757 (998)
T KOG2019|consen 679 FTNQDKFKVLVKQSASRMTNGIADSGHGFAAARSAAMLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPI-VSKLTEIR 757 (998)
T ss_pred cccHHHHHHHHHHHHHHhhccCCcccchhHhhhhhcccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHH-HHHHHHHH
Confidence 9744 45555556666777777777788887777766654332 1122222 22222 35566765
Q ss_pred HhhccCCCeEEEEEcCC-CHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCCCCCCCcceeEEecCCccceeEEEecCC
Q 000890 910 MNQFVGNNMEVSIVGDF-SEEEIESCILDYLGTVRATNDSKREHEYSPILFRPSPSDLHFQQVFLKDTDERACAYIAGPA 988 (1237)
Q Consensus 910 ~~~~~~~n~~l~IvGd~-d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~i~~~~ 988 (1237)
+.....++|.+.|+.|- ....+++.+++++..++...+......+.+. . + .+...+ ++..|.
T Consensus 758 k~ll~~ng~~~~itAd~~q~~~vEkav~kFl~~lp~e~p~g~~st~d~r---~-p--~~~~~i-----------~~~~P~ 820 (998)
T KOG2019|consen 758 KSLLNTNGMIVNITADPKQLTNVEKAVEKFLDSLPRENPSGSKSTWDAR---L-P--LRSEAI-----------RVVIPT 820 (998)
T ss_pred HHHhcCCCeEEEEecCcccchhHHHHHHHHHHhccccCCCCCccCcccc---C-C--CCceeE-----------EEeccc
Confidence 55556699999998876 4889999999999998853221000111111 0 0 000111 111211
Q ss_pred CCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCchHHHHHHHHHHHHH-HHHHHHHHhhcCC
Q 000890 989 PNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPLFFGITMGLLAEIIN-SRLFTTVRDSLGL 1067 (1237)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~l~-srL~~~lRe~~Gl 1067 (1237)
-. ..|. -+... .....||+- ..+.+|+..++ ..||.+||| +|+
T Consensus 821 fq-vnyv------gka~~--------------------------~vpyt~~d~--asl~vlS~~lt~k~Lh~evRe-kGG 864 (998)
T KOG2019|consen 821 FQ-VNYV------GKAGL--------------------------GVPYTHPDG--ASLQVLSKLLTNKWLHDEVRE-KGG 864 (998)
T ss_pred cc-hhhh------hhhcc--------------------------cccCCCCCC--cHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 00 0000 00111 133456664 45677877664 789999999 799
Q ss_pred eeeEeeeeeccccCCceEEEEEEecCcccHHHHHHHHHHHHHhhhhCCCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 000890 1068 TYDVSFELNLFDRLKLGWYVISVTSPPGKVHKAVDACKNVLRGLHSNRIVQRELDRAKRTLLMRHEAEIKSNAYWLGLLA 1147 (1237)
Q Consensus 1068 aYsv~~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~it~~ELe~aK~~l~~~~~~~~~s~~~~~~~l~ 1147 (1237)
|||.++.+.. ..|+|.+++++|| +.-+.++.+...-+.++...+++++|++||...+++.+.. +.+..-. .+
T Consensus 865 AYGgg~s~~s----h~GvfSf~SYRDp-n~lktL~~f~~tgd~~~~~~~~~~dldeAkl~~f~~VDap-~~P~~kG-~~- 936 (998)
T KOG2019|consen 865 AYGGGCSYSS----HSGVFSFYSYRDP-NPLKTLDIFDGTGDFLRGLDVDQQDLDEAKLGTFGDVDAP-QLPDAKG-LL- 936 (998)
T ss_pred ccCCcccccc----ccceEEEEeccCC-chhhHHHhhcchhhhhhcCCccccchhhhhhhhcccccCC-cCCcccc-hH-
Confidence 9999998775 6799999999999 5668999999999999999999999999999999988754 3332221 12
Q ss_pred HHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCCce
Q 000890 1148 HLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDEDSL 1191 (1237)
Q Consensus 1148 ~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~ 1191 (1237)
...+++.+ +..+..++.|.+++..|+.++|++|+...+..
T Consensus 937 -~fl~gvtD---emkQarREqll~vSl~d~~~vae~yl~~~~~~ 976 (998)
T KOG2019|consen 937 -RFLLGVTD---EMKQARREQLLAVSLKDFKAVAEAYLGVGDKG 976 (998)
T ss_pred -HHHhcCCH---HHHHHHHHHHHhhhHHHHHHHHHHHhccCCcc
Confidence 12356665 77788899999999999999999998765554
No 5
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.8e-48 Score=457.04 Aligned_cols=861 Identities=16% Similarity=0.138 Sum_probs=553.2
Q ss_pred CCCCCCCcEEEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChhh-------HhhcC
Q 000890 179 ELPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK-------LLGTG 251 (1237)
Q Consensus 179 ~~~~~p~~~~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~~-------l~~~G 251 (1237)
|....+.++..+|+|||+++++.++..+.. ...|.|++||.+||.+..|+||++|||+|.||++||. |..+|
T Consensus 17 ~~~d~r~y~~I~LpNGl~~LlisDP~a~ks-~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhg 95 (937)
T COG1025 17 PALDDRKYRAIKLPNGLRALLVSDPQADKS-SAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHG 95 (937)
T ss_pred CcccCcceeEEECCCCceEEEecCCCCCcc-ceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcC
Confidence 556677899999999999999999888874 8899999999999999999999999999999999973 67899
Q ss_pred CeEEEEecCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhccChHHHHHHHHHHHh
Q 000890 252 ARSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHL 331 (1237)
Q Consensus 252 ~~~na~t~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~~~~~~~~~~~~~~l 331 (1237)
|..||+|..++|+|++++.+ +.|..+||.+++++.+|.|+++.++|||.+|-+|..+....+.+...++.+.+
T Consensus 96 Gs~NA~T~~~~T~fyFeV~~-------~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~ 168 (937)
T COG1025 96 GSHNASTAGERTAFYFEVEN-------DALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALT 168 (937)
T ss_pred CccccccCCCceeEEEEecH-------HHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhh
Confidence 99999999999999999998 78999999999999999999999999999999999998877777777888888
Q ss_pred ccCCCCCCCCCCCCHHHhcc----cCHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCCCCCCC
Q 000890 332 HSENKLSKRFPIGLEEQIKK----WDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTP 407 (1237)
Q Consensus 332 ~~~~~~~~~~~~G~~~~i~~----it~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~~~~~~ 407 (1237)
.+..|++.++..|+.+++.. -..++|++||++||+++||+++|+|+-+ ++++.+++.++||.+|++....+.. +
T Consensus 169 ~np~HP~srFs~GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~-ldeL~~~a~~~F~~Ipn~~~~~p~~-p 246 (937)
T COG1025 169 ANPGHPLSKFSTGNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQP-LDELAKLAADLFGDIPNRARKIPPI-P 246 (937)
T ss_pred cCCCCCccccCCCChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCC-HHHHHHHHHHHhCcCCCCCCCCCCC-C
Confidence 88888888999999999998 5689999999999999999999999999 5999999999999999876554431 1
Q ss_pred CCccccccccccccccccCCCCCCccccCCCcchh-hHHhhhcccCCCCcccccccCCCCCCCCCcccccHHHHHHHHHH
Q 000890 408 TSSAFGAMANFLVPKLSVGLPGSLSHERSSNSDQS-KLIRRERHAVRPPVEHNWSLSGSGADIPVNKVRTYGDLRNVLMK 486 (1237)
Q Consensus 408 ~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ll~ 486 (1237)
.| .+ ...+. +++...+....+.+.+.|.+++....+.. .....+...+..
T Consensus 247 ~p-~~-------------------------~d~~t~~ii~i~p~~~~~~L~i~f~i~~~~~~~~~---~~~~~~s~Lig~ 297 (937)
T COG1025 247 VP-VV-------------------------TDEQTGKIIHIVPAKPRPRLRIYFPIDDNSAKFRS---KPDEYLSHLIGN 297 (937)
T ss_pred CC-CC-------------------------ChHHhCceEEeccCCCCceEEEEEEcCCccccccc---CCHHHHHHHhcc
Confidence 11 00 00111 11111222345678889999877644322 222333222222
Q ss_pred HHHHHHHHHHHHHhhhcCCCCeeEeecccCccccccccEEEEEEEecC---CcHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 000890 487 RIFLSALHFRINTRYKSSNPPFTSVEMDHSDSGREGCTVTTLTVTAEP---KNWQSAVRVAVQEVRRLKEFGVTNGELTR 563 (1237)
Q Consensus 487 ~l~~~~l~~rl~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~---~~~~~a~~~i~~el~~l~~~g~t~~EL~~ 563 (1237)
..-++ |..-| .+.|+..++.++....+ ...+.|.+++.... ++.++++..+++.|+-+..+|+....++.
T Consensus 298 es~gs-L~~~L-----k~~Glit~l~a~~~~~~-~n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~f~E 370 (937)
T COG1025 298 ESPGS-LLAWL-----KKQGLITELSAGLDPIS-GNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDE 370 (937)
T ss_pred CCCch-HHHHH-----Hhccchhhhcccccccc-CCcceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhccchhhHHHH
Confidence 11112 21112 23456666665555444 23346777765533 46899999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHhhccCCCchhhHHHHHhhcCCCcccChHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhcCCCCCCC
Q 000890 564 YMDALLKDSEHLAAMIDNISSVDNLDFIMESDALGHTVMDQRQGHASLVAVAGTITLEEVNSIGAEVLEFISDFGRPSAP 643 (1237)
Q Consensus 564 ak~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~~~~~~ 643 (1237)
..+-.-.. +...+.+...+.+..++..+.. .+........-.+..-++++++.+..-+. |
T Consensus 371 lq~v~~l~----f~y~~~t~~~~~~~~l~~~m~~-----~p~~~~~~~~~~~~~yd~~~~~~~l~~~~-----------p 430 (937)
T COG1025 371 LQNVLDLD----FRYPSKTRPMDYVSWLADNMER-----EPVEHTLYASLVLPRYDPKAIQERLALMT-----------P 430 (937)
T ss_pred HHHHHHhh----hcccccCChHHHHHHHHHhccc-----CChhhhhchhhcccccCHHHHHHHHHhhC-----------c
Confidence 76554322 2222333333333333333222 14344444444556667778877766432 5
Q ss_pred CCceEEEeccccccccCCCCccccCChHHHHHHHHcccCCCCCCCCcc-cCCccccchhHHHHHHhccCCCCCCCCCCCc
Q 000890 644 VPAAIVACVPKKVHIDGIGETEFKISPNEIVDAIKSGMEEPIEAEPEL-EVPKELISASELEELKLRCRPSFIPPRPELN 722 (1237)
Q Consensus 644 ~~~~~~~~~P~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~~~~~~~~~~~~~~~p~~~~~~ 722 (1237)
++..++...+...+-+....+...+.-+.+.+.... .+++. ..+. +..+....|+|..-..+
T Consensus 431 en~R~~lis~~~~~~~~a~~~~~py~v~~~~~~~~~-------~~~~~~~~~~----------l~lP~~N~fIp~~~~~~ 493 (937)
T COG1025 431 ENARLWLISKLEEHDKAAYFYGFPYQVDDYTAQPLD-------AWQQKADSIE----------LSLPEPNPFIPDDVSLI 493 (937)
T ss_pred cceEEEEecCCCCccccceeecCcceecchhhhhhh-------hhhccccccc----------ccCCCCCCCCCcccccc
Confidence 677777766665442222222222222211111100 01000 0000 01111233444311111
Q ss_pred ceecccCCCCeEEEEecCCcEEEEEecCCCC-ceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHH
Q 000890 723 VTKVHDKESGITQLRLSNGIPINYKISKSEA-QGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELF 801 (1237)
Q Consensus 723 ~~~~~~~~~~i~~~~L~NGv~v~~~~~~~~~-~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~ 801 (1237)
..+...+.+ .......|+..++.+.+.+.. +...+.+.++......++...-+..+...++... +.++.+ ...
T Consensus 494 ~~~~~~~~p-~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~~~la~da--l~~~~y---~A~ 567 (937)
T COG1025 494 KSEKKFTFP-QLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYAYLANDA--LDKLSY---QAS 567 (937)
T ss_pred ccccCCCCc-hhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHHHHHHHHH--HHhhhh---HHH
Confidence 111111111 112233444444445555555 7788888888776655544444444444444332 233332 222
Q ss_pred HhcceeeeeeecCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHH
Q 000890 802 CVNHLINCSLESTEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLA 881 (1237)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~ 881 (1237)
+ .|+++++..+...+. +++++-.+.+..++..+-+.+..-.++++.|...|..+.++++....+-....+...+..
T Consensus 568 ~--aG~sfs~~~~~~Gl~--ltisGft~~lp~L~~~~l~~l~~~~~~~~~f~~~K~~~~~~~~~a~~~~p~~~~~~~l~~ 643 (937)
T COG1025 568 L--AGLSFSLAANSNGLD--LTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEELKNALTGKPYRQALDGLTG 643 (937)
T ss_pred h--cceEEEeecCCCceE--EEeeccccchHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHhhh
Confidence 3 445555545545444 556666678999999999999999999999999999999999875443323333333333
Q ss_pred HhcCCCCCCCCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCC
Q 000890 882 MLNGDERFVEPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFRP 961 (1237)
Q Consensus 882 ~~~~~~~~~~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~ 961 (1237)
+....+.....-.+.++.++.+++..|....+.+...++.|.|+...+++.++++.....++..... . +..+.+..
T Consensus 644 l~~~~~~s~~e~~~~l~~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~~~da~~l~~~~~~~l~~~~s~---~-~~~~~~~~ 719 (937)
T COG1025 644 LLQVPYWSREERRNALESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADATNLAETLQKKLPAIGST---W-YRNPSVYL 719 (937)
T ss_pred hhCCCCcCHHHHHHHhhhccHHHHHHHHHHhhhccceeeeeeccchHHHHHHHHHHHHhhhcccCCc---c-cCCCceec
Confidence 3333222222235667888999999999999999999999999999999998887655555432211 0 11111111
Q ss_pred CCCCCcceeEEecCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCch
Q 000890 962 SPSDLHFQQVFLKDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPLF 1041 (1237)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1237)
............+....++..+..+... + +.
T Consensus 720 -~~~~~~~~e~~~~~~~~an~~i~~~~~~----------------------------------------------~--~~ 750 (937)
T COG1025 720 -LKGGTRIFETVGGESDSANAAILYPQQY----------------------------------------------D--EI 750 (937)
T ss_pred -cCCCeeEeeeccCCcccccceeEecccc----------------------------------------------c--hH
Confidence 1111111111122222333333332210 0 01
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEec-CcccHHHHHHHHHHHHHhhhhCCCCHH
Q 000890 1042 F-GITMGLLAEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTS-PPGKVHKAVDACKNVLRGLHSNRIVQR 1119 (1237)
Q Consensus 1042 ~-~~~~~lL~~~l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~-~p~~~~~~~~~~~~~l~~l~~~~it~~ 1119 (1237)
- .+...++++++..-.|.+||.++++.|-|.+.+........+.|.+.+.. .|+-+.+-++.+.+....... +++++
T Consensus 751 ~~~a~s~Ll~~l~~~~ff~~LRTkeQLGY~Vfs~~~~v~~~~gi~f~vqS~~~~p~~L~~r~~~F~~~~~~~l~-~ms~e 829 (937)
T COG1025 751 KSSALSSLLGQLIHPWFFDQLRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLLERINAFLETAEPELR-EMSEE 829 (937)
T ss_pred HHHHHHHHHHHHHhHHhHHHhhhhhhcceEEEecceeecCccceEEEEeCCCCChHHHHHHHHHHHHHHHHHHH-hCCHH
Confidence 1 23446899999999999999999999999998776554334444444422 333444555555554444333 69999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCC
Q 000890 1120 ELDRAKRTLLMRHEAEIKSNAYWLGLLA-HLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDED 1189 (1237)
Q Consensus 1120 ELe~aK~~l~~~~~~~~~s~~~~~~~l~-~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~ 1189 (1237)
+++..|..+++++.....+....+..+. .+... ..+++..+...+.++.+|.+++.++....+..+.
T Consensus 830 ~Fe~~k~alin~il~~~~nl~e~a~r~~~~~~~g---~~~Fd~~ek~i~~vk~LT~~~l~~f~~~~l~~~~ 897 (937)
T COG1025 830 DFEQIKKALINQILQPPQNLAEEASRLWKAFGRG---NLDFDHREKKIEAVKTLTKQKLLDFFENALSYEQ 897 (937)
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHhccC---CCCcCcHHHHHHHHHhcCHHHHHHHHHHhhcccc
Confidence 9999999999999877665554444443 22222 2334777888999999999999999998876553
No 6
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.1e-45 Score=440.47 Aligned_cols=846 Identities=17% Similarity=0.194 Sum_probs=533.3
Q ss_pred CcEEEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChh------h-HhhcCCeEEEE
Q 000890 185 KLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKRE------K-LLGTGARSNAY 257 (1237)
Q Consensus 185 ~~~~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~------~-l~~~G~~~na~ 257 (1237)
.+...+|+|||+++++.++.+.. .++.+.|++||..||.+.+|+|||+|||+|.||++|| . |...||+.||+
T Consensus 27 ~yr~~~L~Ngl~alLisDp~tD~-ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~ 105 (974)
T KOG0959|consen 27 EYRGIELTNGLRALLISDPKTDK-SSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAY 105 (974)
T ss_pred ceeEEEecCCceEEEecCCCCCc-cceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccc
Confidence 57889999999999999987665 5899999999999999999999999999999999998 2 56799999999
Q ss_pred ecCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhccCCCC
Q 000890 258 TDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKL 337 (1237)
Q Consensus 258 t~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~~~~~~~~~~~~~~l~~~~~~ 337 (1237)
|+.++|+|++.+.. +.|+.+||.+++.+.+|.|.++.++||+.+|.+|.+.....+.+...++.+.+...+|+
T Consensus 106 T~~e~T~y~F~V~~-------~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp 178 (974)
T KOG0959|consen 106 TDSEHTNYYFDVQH-------DHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHP 178 (974)
T ss_pred cccccceEEEecch-------HHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCc
Confidence 99999999999965 77999999999999999999999999999999999998888888888999999999999
Q ss_pred CCCCCCCCHHHhcccC-----HHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q 000890 338 SKRFPIGLEEQIKKWD-----ADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTPTSSAF 412 (1237)
Q Consensus 338 ~~~~~~G~~~~i~~it-----~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~p~~~ 412 (1237)
++++++|+.++|.... ++.|++||++||++++|+++|+|+.+ ++.+..++.+.|+.++++..+.|.....| |
T Consensus 179 ~~kF~tGN~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~es-lD~Le~lv~~~F~~i~N~~~~~p~f~~~p--~ 255 (974)
T KOG0959|consen 179 YSKFSTGNKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKES-LDVLESLVTRLFDEISNKKKPRPVFPEPP--F 255 (974)
T ss_pred chhccccchhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCC-hhHHHHHHHHHcccccccCCCCCcccCCC--C
Confidence 9999999999999999 99999999999999999999999999 59999999999999998876654421111 1
Q ss_pred cccccccccccccCCCCCCccccCCCcchh-hHHhhhcccCCCCcccccccCCCCCCCCCcccccHHHHHHHHHHHHHHH
Q 000890 413 GAMANFLVPKLSVGLPGSLSHERSSNSDQS-KLIRRERHAVRPPVEHNWSLSGSGADIPVNKVRTYGDLRNVLMKRIFLS 491 (1237)
Q Consensus 413 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ll~~l~~~ 491 (1237)
+ | ++. +++...+-.....+.+.|++|+....+...+...+..+...-..+.+.+
T Consensus 256 ~-------~------------------e~~~~~~~v~pik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~ 310 (974)
T KOG0959|consen 256 L-------P------------------EELKKLVRVVPIKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLS 310 (974)
T ss_pred C-------h------------------HHhCcEEEEEeccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHH
Confidence 0 0 000 0011111123334788899997765443332222222111111122222
Q ss_pred HHHHHHHHhhhcCCCCeeEeecccCccccccccEEEEEEEecC---CcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 000890 492 ALHFRINTRYKSSNPPFTSVEMDHSDSGREGCTVTTLTVTAEP---KNWQSAVRVAVQEVRRLKEFGVTNGELTRYMDAL 568 (1237)
Q Consensus 492 ~l~~rl~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~---~~~~~a~~~i~~el~~l~~~g~t~~EL~~ak~~l 568 (1237)
.|..+ +++.+..++-.+.. .+.+.|.+.+.... ++.++++..++.-|+-+...|..+.-++.....
T Consensus 311 ~Lk~~---------gw~~sl~a~~~~~a-s~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~- 379 (974)
T KOG0959|consen 311 YLKRL---------GWATSLEAGIPEFA-SGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLI- 379 (974)
T ss_pred HHHHh---------hchheeecCCCccc-cccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHh-
Confidence 22222 23333333222111 12235667665544 467899999999999888888775555543321
Q ss_pred HHHHHHHHHhhccCCCchhhHHHHHhhcCCCcccChHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhcCCCCCCCCCceE
Q 000890 569 LKDSEHLAAMIDNISSVDNLDFIMESDALGHTVMDQRQGHASLVAVAGTITLEEVNSIGAEVLEFISDFGRPSAPVPAAI 648 (1237)
Q Consensus 569 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~~~~~~~~~~~ 648 (1237)
.... +...+.......+..+..++. .-|...+-.....+....++.|+.+...+- |.++.+
T Consensus 380 -~~~~--Frf~~k~~p~~~~~~~~~nlq-----~~P~~~il~~~~ll~~~~p~~i~~~~~~L~-----------p~n~~v 440 (974)
T KOG0959|consen 380 -SEVK--FRFQDKEPPMEYASEIASNLQ-----YYPVEDVLTGSYLLTEFDPDLIQEVLSSLV-----------PSNMRV 440 (974)
T ss_pred -hhhh--eeecccCCcHHHHHHHHhhcc-----cCChHHhhcchhhhhhcChHHHHHHHHhcC-----------ccccee
Confidence 1111 222233333334333333332 123333334444566677888777665432 455555
Q ss_pred EEeccccccccCCC------CccccCChHHHHHHHHcccCCCCCCCCcccCCccccchhHHHHHHhccCCCCCCCCCCCc
Q 000890 649 VACVPKKVHIDGIG------ETEFKISPNEIVDAIKSGMEEPIEAEPELEVPKELISASELEELKLRCRPSFIPPRPELN 722 (1237)
Q Consensus 649 ~~~~P~~~~~~~~~------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~p~~~~~~ 722 (1237)
+++.-......... .++...-++++.+.|.+.. +. .+...| ....|+|..-...
T Consensus 441 ~~~s~~~~~~~d~~E~~ygt~y~~e~i~~~~~~~~~~~~---~~--~~l~lP---------------~~nefI~t~f~~~ 500 (974)
T KOG0959|consen 441 ILVSRSFEGKTDKAEPWYGTAYKVEDIPAEIIKEWENSH---LN--PELHLP---------------TPNEFIPTDFSIL 500 (974)
T ss_pred eeeeeccccccccccceeccccccccCCHHHHHHhhccC---cc--ccccCC---------------CCCcccccccccc
Confidence 55443221100000 1111112334444442221 00 111111 1122232100000
Q ss_pred ceecccCCCCeEEEEe-cCCcEEEEEecC-CCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHH
Q 000890 723 VTKVHDKESGITQLRL-SNGIPINYKISK-SEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVEL 800 (1237)
Q Consensus 723 ~~~~~~~~~~i~~~~L-~NGv~v~~~~~~-~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~ 800 (1237)
.......+.+ +... .-..+++++.++ +..+..++.+.+........+...++..++..++... +.......
T Consensus 501 ~~~~~~~~~P--~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d~-----l~E~~Y~A 573 (974)
T KOG0959|consen 501 PAPIPKLEYP--VLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKDQ-----LNEYLYPA 573 (974)
T ss_pred cccCccccCC--eeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHHHHHH-----HhHHHHHH
Confidence 0000001111 2222 235678887644 5567888888888877766667777777777666532 22222222
Q ss_pred HHhcceeeeeeecCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHH
Q 000890 801 FCVNHLINCSLESTEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLML 880 (1237)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~ 880 (1237)
.+ .|..++++.+..... +++..-++++..+++.+.+++.....+++.|+.+++.+..++++...+.....+..+..
T Consensus 574 ~~--aGl~~~~~~s~~G~~--~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~ 649 (974)
T KOG0959|consen 574 LL--AGLTYSLSSSSKGVE--LRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRNHAFDNPYQLANDYLL 649 (974)
T ss_pred Hh--ccceEEeeecCCceE--EEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHH
Confidence 23 344555545555555 44555668899999999999999999999999999999999998555555667777776
Q ss_pred HHhcCCCCCCCCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcC----ccCC
Q 000890 881 AMLNGDERFVEPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREH----EYSP 956 (1237)
Q Consensus 881 ~~~~~~~~~~~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~----~~~~ 956 (1237)
.++.........-.+.++.++.+++..|....+.+.-+++.|.||++.+++..+++.....+....+...+. ....
T Consensus 650 lll~~~~W~~~e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l~~~~~~~~p~~~~~~~~~ 729 (974)
T KOG0959|consen 650 LLLEESIWSKEELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDILKSAAPNSRPLFRSEHLPR 729 (974)
T ss_pred HHhhccccchHHHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhhhccCCCCccccccccCcc
Confidence 655443333344566778899999999999999999999999999999999998666665552211110000 0000
Q ss_pred cccCCCCCCCcceeEEec---CCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhh
Q 000890 957 ILFRPSPSDLHFQQVFLK---DTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQR 1033 (1237)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~---~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1237)
..+.. +. ....++.. ..+..+++.+.+....
T Consensus 730 ~~~~l-p~--G~~~~~~~~~n~~~~ns~i~~~~Q~~~------------------------------------------- 763 (974)
T KOG0959|consen 730 REIQL-PN--GDYYFYRHLLNKTDDNSCIEVYYQIGV------------------------------------------- 763 (974)
T ss_pred cceec-cC--CceEEEEcccccCCCCceEEEEEEccc-------------------------------------------
Confidence 00000 00 00011111 1112233333222100
Q ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEE--ecCcccHHHHHHHHHHHHHhh
Q 000890 1034 KLRSHPLFFGITMGLLAEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISV--TSPPGKVHKAVDACKNVLRGL 1111 (1237)
Q Consensus 1034 ~~~~~~~~~~~~~~lL~~~l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~--~~~p~~~~~~~~~~~~~l~~l 1111 (1237)
+-......+.++..++...+|..||.+..+.|-+++...... +.-.+.|.+ ...++-++.-+..+.+.+.+.
T Consensus 764 ----~~~~~~~~~~L~~~li~ep~Fd~LRTkeqLGYiv~~~~r~~~--G~~~~~i~Vqs~~~~~~le~rIe~fl~~~~~~ 837 (974)
T KOG0959|consen 764 ----QDTRDNAVLGLLEQLIKEPAFDQLRTKEQLGYIVSTGVRLNY--GTVGLQITVQSEKSVDYLEERIESFLETFLEE 837 (974)
T ss_pred ----chhHHHHHHHHHHHHhccchHHhhhhHHhhCeEeeeeeeeec--CcceeEEEEccCCCchHHHHHHHHHHHHHHHH
Confidence 001113467789999999999999987777887777655432 111223333 234445555555555544444
Q ss_pred hhCCCCHHHHHHHHHHHHHHHHHH-----hhhhhHHHHHHHHHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcC
Q 000890 1112 HSNRIVQRELDRAKRTLLMRHEAE-----IKSNAYWLGLLAHLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRV 1186 (1237)
Q Consensus 1112 ~~~~it~~ELe~aK~~l~~~~~~~-----~~s~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~ 1186 (1237)
.. ..++++++.-+..++...... .+...+|......- +. .+..+...+.++.+|.+|+..+...++.
T Consensus 838 i~-~m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~--y~-----f~r~~~~v~~l~~i~k~~~i~~f~~~~~ 909 (974)
T KOG0959|consen 838 IV-EMSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDEIIIGQ--YN-----FDRDEKEVEALKKITKEDVINFFDEYIR 909 (974)
T ss_pred HH-hcchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHHHHhhh--hc-----chhhHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 33 588999999999998876542 35678887766422 11 2455677778999999999999998864
Q ss_pred C
Q 000890 1187 D 1187 (1237)
Q Consensus 1187 ~ 1187 (1237)
.
T Consensus 910 ~ 910 (974)
T KOG0959|consen 910 K 910 (974)
T ss_pred c
Confidence 3
No 7
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=1.4e-45 Score=442.81 Aligned_cols=413 Identities=24% Similarity=0.316 Sum_probs=314.0
Q ss_pred CCCCCCCcEEEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChh------hHhhcCC
Q 000890 179 ELPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKRE------KLLGTGA 252 (1237)
Q Consensus 179 ~~~~~p~~~~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~------~l~~~G~ 252 (1237)
+.+..+.+++.+|+||++|++.+++..+. +++.++|++|++.|++++.|+|||||||+|+||++++ .++..|+
T Consensus 10 ~~~~~~~~~~~~L~nGl~~~~~~~~~~~~-vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~ 88 (438)
T COG0612 10 ALPALPGLQVFTLPNGLRVITYPNPTAPT-VSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGG 88 (438)
T ss_pred cccccccceEEEcCCCCEEEEEeCCCCCE-EEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcC
Confidence 55666779999999999999999987665 5999999999999999999999999999999988864 3678999
Q ss_pred eEEEEecCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHh
Q 000890 253 RSNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMN-TIEYRVDCQLLQHL 331 (1237)
Q Consensus 253 ~~na~t~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~-~~~~~~~~~~~~~l 331 (1237)
.+||+|++|+|+|++++++ ++++.+|++++|++.+|.|++++|++||++|++|+++.. ++...+...+...+
T Consensus 89 ~~na~ts~d~t~y~~~~l~-------~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~ 161 (438)
T COG0612 89 QLNAFTSFDYTVYYLSVLP-------DNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEAL 161 (438)
T ss_pred eeeccccchhhhhhhhhch-------hhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHh
Confidence 9999999999999999655 789999999999999999999999999999999999975 56677888889999
Q ss_pred ccCCCCCCCCCCCCHHHhcccCHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q 000890 332 HSENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTPTSSA 411 (1237)
Q Consensus 332 ~~~~~~~~~~~~G~~~~i~~it~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~p~~ 411 (1237)
|++++|+ ++++|++++|+++|.+||++||++||+|+||+|+|||||++ +++.++++++|++|+...++.... ..|
T Consensus 162 ~~~~p~~-~~~~G~~e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~-~~v~~~~~~~f~~~~~~~~~~~~~-~~~-- 236 (438)
T COG0612 162 YGNHPLG-RPILGTEESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDA-EEVVELIEKYFGDLPGAAPPPKIP-PEP-- 236 (438)
T ss_pred hccCCCC-CCCCCCHHHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCH-HHHHHHHHHHHccCCccCCCCCCC-Ccc--
Confidence 9976665 78999999999999999999999999999999999999997 999999999999999722111110 111
Q ss_pred ccccccccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCcccccccCCCCCCCCCcccccHHHHHHHHHHHHHHH
Q 000890 412 FGAMANFLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSLSGSGADIPVNKVRTYGDLRNVLMKRIFLS 491 (1237)
Q Consensus 412 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ll~~l~~~ 491 (1237)
...+..... .... .+ +...++++..++..+..... . ......++..++.+
T Consensus 237 -------------~~~~~~~~~-~~~~-~~-------~~~~~~~~~~g~~~~~~~~~------~--~~~~~~l~~~llgg 286 (438)
T COG0612 237 -------------PLGPERVVR-VNDP-EQ-------PDLEQAWLALGYPGPDYDSP------D--DYAALLLLNGLLGG 286 (438)
T ss_pred -------------ccCCCceEE-ecCC-CC-------chhhhhhhhccccCcCcCcc------h--hhHHHHHHHHHhCC
Confidence 000000000 0000 00 01122334444444432211 0 11223344555555
Q ss_pred HHHHHHHHhhhcCCCCeeEeecccCccccccccEEEEEEEecCCcHHHHHHHHHHHHHHHHHcC---CCHHHHHHHHHHH
Q 000890 492 ALHFRINTRYKSSNPPFTSVEMDHSDSGREGCTVTTLTVTAEPKNWQSAVRVAVQEVRRLKEFG---VTNGELTRYMDAL 568 (1237)
Q Consensus 492 ~l~~rl~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~a~~~i~~el~~l~~~g---~t~~EL~~ak~~l 568 (1237)
...+||+..+|+..+++|++++....... .+.+.+++++.+.+.+.+.+.|.++++.+.+.+ +|++|++++|..+
T Consensus 287 ~~~SrLf~~~re~~glay~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~ 364 (438)
T COG0612 287 GFSSRLFQELREKRGLAYSVSSFSDFLSD--SGLFSIYAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLL 364 (438)
T ss_pred CcchHHHHHHHHhcCceeeeccccccccc--cCCceEEEEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 57788889999999999999854332222 236788889988888888888888888887765 9999999999998
Q ss_pred HHHHHHHHHhhccCCCchhhHHHHHhhcCCCcccChHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhcCCCCCCCCCceE
Q 000890 569 LKDSEHLAAMIDNISSVDNLDFIMESDALGHTVMDQRQGHASLVAVAGTITLEEVNSIGAEVLEFISDFGRPSAPVPAAI 648 (1237)
Q Consensus 569 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~~~~~~~~~~~ 648 (1237)
.+.+ ....+ +... +.+.+.....+++.....+++.+.|++||++||+++|++++. +++..+
T Consensus 365 ~~~~---~~~~~---s~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~~~----------~~~~~~ 425 (438)
T COG0612 365 IGLL---LLSLD---SPSS---IAELLGQYLLLGGSLITLEELLERIEAVTLEDVNAVAKKLLA----------PENLTI 425 (438)
T ss_pred HHHh---hhccC---CHHH---HHHHHHHHHHhcCCccCHHHHHHHHHhcCHHHHHHHHHHhcC----------CCCcEE
Confidence 7754 22222 2222 233333333334566788899999999999999999999986 455788
Q ss_pred EEecccc
Q 000890 649 VACVPKK 655 (1237)
Q Consensus 649 ~~~~P~~ 655 (1237)
++++|.+
T Consensus 426 ~~~~p~~ 432 (438)
T COG0612 426 VVLGPEK 432 (438)
T ss_pred EEEcccc
Confidence 8888864
No 8
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4e-45 Score=388.10 Aligned_cols=406 Identities=22% Similarity=0.257 Sum_probs=308.8
Q ss_pred CCCCCCcEEEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChh------hHhhcCCe
Q 000890 180 LPSHPKLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKRE------KLLGTGAR 253 (1237)
Q Consensus 180 ~~~~p~~~~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~------~l~~~G~~ 253 (1237)
+...|+.+..+|+||++|..-.+ ...+ +++.+||++||+.|.+...|+|||||||+|+||+++. .++.+|+.
T Consensus 28 ~~~~P~t~vttL~NGlrVaTE~~-~a~T-ATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGah 105 (467)
T KOG0960|consen 28 LLSVPETEVTTLPNGLRVATEHN-SAST-ATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAH 105 (467)
T ss_pred hccCCcceEEEcCCCcEEEeccC-CCcc-eEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHH
Confidence 56689999999999999999777 5555 5899999999999999999999999999999999986 35689999
Q ss_pred EEEEecCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHhc
Q 000890 254 SNAYTDFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMN-TIEYRVDCQLLQHLH 332 (1237)
Q Consensus 254 ~na~t~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~-~~~~~~~~~~~~~l~ 332 (1237)
+||+|++|+|+|++.+++ +++++++++|+|++.+..+.+.+|++||++|+.|++..+ +.+..+++.++...|
T Consensus 106 LNAytSReqT~yyakal~-------~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHataf 178 (467)
T KOG0960|consen 106 LNAYTSREQTVYYAKALS-------KDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAF 178 (467)
T ss_pred hcccccccceeeehhhcc-------ccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Confidence 999999999999999998 789999999999999999999999999999999999865 567889999999999
Q ss_pred cCCCCCCCCCCCCHHHhcccCHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q 000890 333 SENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTPTSSAF 412 (1237)
Q Consensus 333 ~~~~~~~~~~~G~~~~i~~it~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~p~~~ 412 (1237)
.++|++ +...|+.|.|++|+.+||++|-++||.++||+|..+|.|++ ++++++++++||+++....+..++...|++|
T Consensus 179 QgtPL~-~tilGp~enI~si~r~DL~~yi~thY~~~RmVlaaaGgV~H-e~lv~la~k~fg~~~~~~~~~~~~~~~~~~F 256 (467)
T KOG0960|consen 179 QGTPLG-RTILGPSENIKSISRADLKDYINTHYKASRMVLAAAGGVKH-EELVKLAEKYFGDLSKLQTGDKVPLVPPARF 256 (467)
T ss_pred cCCccc-ccccChhhhhhhhhHHHHHHHHHhcccCccEEEEecCCcCH-HHHHHHHHHHcCCCcccccCcCCCCCCCccc
Confidence 999987 68999999999999999999999999999999999999999 9999999999999775332222211334334
Q ss_pred cccccccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCcccccccCCCC-CCCCCcccccHHHHHHHHHHHH---
Q 000890 413 GAMANFLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSLSGSG-ADIPVNKVRTYGDLRNVLMKRI--- 488 (1237)
Q Consensus 413 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~~~~~~~~~~l~~~ll~~l--- 488 (1237)
+... .+ ..+..-+..++.++....+-. +|+-. ..+++.+++..
T Consensus 257 tgsE-----------------vR----------~rdd~lP~a~~AiAVEG~~w~~pD~~~------l~van~iiG~wdr~ 303 (467)
T KOG0960|consen 257 TGSE-----------------VR----------VRDDDLPLAHIAIAVEGVSWAHPDYFA------LMVANTIIGNWDRT 303 (467)
T ss_pred cCce-----------------ee----------ecCCCCchhheeeeEecCCcCCccHHH------HHHHHHHhhhhhcc
Confidence 2111 00 001111222233333222221 11100 01122222110
Q ss_pred --HHHHHHHHHHHhhhcCC--CCeeEeecccCccccccccEEEEEEEe-cCCcHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 000890 489 --FLSALHFRINTRYKSSN--PPFTSVEMDHSDSGREGCTVTTLTVTA-EPKNWQSAVRVAVQEVRRLKEFGVTNGELTR 563 (1237)
Q Consensus 489 --~~~~l~~rl~~~l~~~~--~~~~~~~~~~~~~g~~~~~~~~i~~~~-~~~~~~~a~~~i~~el~~l~~~g~t~~EL~~ 563 (1237)
...-+.++|.+...+.. ..|.+++..|.|.|. |.+++.+ .+...+..+..+.+++.+|+. -+|++|+++
T Consensus 304 ~g~g~~~~s~La~~~~~~~l~~sfqsFnt~YkDTGL-----wG~y~V~~~~~~iddl~~~vl~eW~rL~~-~vteaEV~R 377 (467)
T KOG0960|consen 304 EGGGRNLSSRLAQKIQQDQLCHSFQSFNTSYKDTGL-----WGIYFVTDNLTMIDDLIHSVLKEWMRLAT-SVTEAEVER 377 (467)
T ss_pred cCCccCCccHHHHHHHHHHHHHHHhhhhcccccccc-----eeEEEEecChhhHHHHHHHHHHHHHHHHh-hccHHHHHH
Confidence 00012223333222221 246678889998885 6678778 778899999999999999998 699999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCchhhHHHHHhhcCCCcccChHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhcCCCCCCC
Q 000890 564 YMDALLKDSEHLAAMIDNISSVDNLDFIMESDALGHTVMDQRQGHASLVAVAGTITLEEVNSIGAEVLEFISDFGRPSAP 643 (1237)
Q Consensus 564 ak~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~~~~~~ 643 (1237)
||++|..++ ...+++... +.+.++...+..+..-.+.++.++|++||.++|.++|.+|+- +
T Consensus 378 AKn~Lkt~L---ll~ldgttp------i~ediGrqlL~~Grri~l~El~~rId~vt~~~Vr~va~k~iy-----d----- 438 (467)
T KOG0960|consen 378 AKNQLKTNL---LLSLDGTTP------IAEDIGRQLLTYGRRIPLAELEARIDAVTAKDVREVASKYIY-----D----- 438 (467)
T ss_pred HHHHHHHHH---HHHhcCCCc------hHHHHHHHHhhcCCcCChHHHHHHHhhccHHHHHHHHHHHhh-----c-----
Confidence 999999876 445555333 355666666666766678889999999999999999999985 2
Q ss_pred CCceEEEeccc
Q 000890 644 VPAAIVACVPK 654 (1237)
Q Consensus 644 ~~~~~~~~~P~ 654 (1237)
...++..++|-
T Consensus 439 ~~iAia~vG~i 449 (467)
T KOG0960|consen 439 KDIAIAAVGPI 449 (467)
T ss_pred CCcceeeeccc
Confidence 34567777764
No 9
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=4e-40 Score=399.52 Aligned_cols=329 Identities=21% Similarity=0.242 Sum_probs=258.4
Q ss_pred EEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChhh-------HhhcCCeEEEEecC
Q 000890 188 RGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK-------LLGTGARSNAYTDF 260 (1237)
Q Consensus 188 ~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~~-------l~~~G~~~na~t~~ 260 (1237)
+.+|+|||+|++++++..+. +.+.++|++||++|++++.|+|||+|||+|+||++++. ++.+|+++||+|+.
T Consensus 2 ~~tL~NGLrVllv~~p~~p~-vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~ 80 (696)
T TIGR02110 2 RITLPNGLRVHLYHQPDAKR-AAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLE 80 (696)
T ss_pred eEEcCCCCEEEEEECCCCCE-EEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcC
Confidence 46899999999999988877 58999999999999999999999999999999999852 56799999999999
Q ss_pred ceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHhccCCCCCC
Q 000890 261 HHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMN-TIEYRVDCQLLQHLHSENKLSK 339 (1237)
Q Consensus 261 d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~-~~~~~~~~~~~~~l~~~~~~~~ 339 (1237)
|+|+|++++++ ++++.+|++++|++.+|.|++++|++||++|++|+++.. ++..++...+...+|++++|+
T Consensus 81 d~T~y~~~v~~-------~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~- 152 (696)
T TIGR02110 81 RTTAFFFELPA-------AALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLR- 152 (696)
T ss_pred CeEEEEEEecH-------HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCC-
Confidence 99999999998 779999999999999999999999999999999999865 556667777778888776665
Q ss_pred CCCCCCHHHhcccC---HHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCccccccc
Q 000890 340 RFPIGLEEQIKKWD---ADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTPTSSAFGAMA 416 (1237)
Q Consensus 340 ~~~~G~~~~i~~it---~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~p~~~~~~~ 416 (1237)
++.+|++++|++++ .+||++||++||+|+||+|+|+||+++ +++.++++++|+.|+.+..+.+. ..++
T Consensus 153 ~~~iGt~esL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~-eel~~l~e~~f~~~~~~~~~~~~--~~~p------ 223 (696)
T TIGR02110 153 RFHAGSRDSLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSL-DELEQLAARFGASLAAGGECAQA--PPAP------ 223 (696)
T ss_pred CCCCCCHHHHhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCH-HHHHHHHHHHhCCCCCCCCCCCC--CCCC------
Confidence 68999999999876 999999999999999999999999996 99999999999999865433211 1010
Q ss_pred cccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCcccccccCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHH
Q 000890 417 NFLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSLSGSGADIPVNKVRTYGDLRNVLMKRIFLSALHFR 496 (1237)
Q Consensus 417 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ll~~l~~~~l~~r 496 (1237)
. ... ....+ .. ...+.+.+.|..|+..... ... ..++..++.+...++
T Consensus 224 -----~----~~~----------~~~~~--~~--~~~~q~~l~~~~p~~~~~d----~~a-----l~lL~~iLg~g~sSr 271 (696)
T TIGR02110 224 -----L----LRF----------DRLTL--AG--GSEPRLWLLFALAGLPATA----RDN-----VTLLCEFLQDEAPGG 271 (696)
T ss_pred -----C----CCC----------ceeEE--Ee--cCcceEEEEEeecCCCCCC----hHH-----HHHHHHHhCCCcchH
Confidence 0 000 00000 00 1123455666666543211 111 123444555555566
Q ss_pred HHHhhhcCCCCeeEeecccCccccccccEEEEEEEe---cCCcHHHHHHHHHHHHHHHHHc--CCCHHHHHHHHHHH
Q 000890 497 INTRYKSSNPPFTSVEMDHSDSGREGCTVTTLTVTA---EPKNWQSAVRVAVQEVRRLKEF--GVTNGELTRYMDAL 568 (1237)
Q Consensus 497 l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~---~~~~~~~a~~~i~~el~~l~~~--g~t~~EL~~ak~~l 568 (1237)
|+..+++ .+++|++++++... ..+.+.|.+++.+ .+++.+++++.|.++|++++++ +++.+|++++|+.-
T Consensus 272 L~~~LRe-~GLaysV~s~~~~~-~~g~~lf~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~ 346 (696)
T TIGR02110 272 LLAQLRE-RGLAESVAATWLYQ-DAGQALLALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRR 346 (696)
T ss_pred HHHHHHH-CCCEEEEEEecccc-CCCCcEEEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhh
Confidence 6677775 78999998855322 2233478888887 3458999999999999999999 99999999999873
No 10
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=4.7e-38 Score=377.66 Aligned_cols=407 Identities=19% Similarity=0.249 Sum_probs=327.9
Q ss_pred CeEEEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcceeeeee
Q 000890 732 GITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHLINCSL 811 (1237)
Q Consensus 732 ~i~~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~~~~~~ 811 (1237)
+++.++|+||+++++.+++. .+.+.+.+++++|+..|+....|++|+++||+++|+ ++++..++.+.++..|...++
T Consensus 16 ~~~~~~L~nGl~~~~~~~~~-~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt--~~~~~~~i~~~~~~~G~~~na 92 (438)
T COG0612 16 GLQVFTLPNGLRVITYPNPT-APTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGT--TGLPSAELAEAFEKLGGQLNA 92 (438)
T ss_pred cceEEEcCCCCEEEEEeCCC-CCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCC--CCCChHHHHHHHHHhcCeeec
Confidence 47889999999999999764 899999999999999999999999999999999996 777777899999999999999
Q ss_pred ecCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCC---
Q 000890 812 ESTEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDER--- 888 (1237)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--- 888 (1237)
.++.+.+.+.++ +..++++.+|+++.+++.+|.|++++|+++|++++++++...++|.+.....+...+++ +++
T Consensus 93 ~ts~d~t~y~~~--~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~-~~p~~~ 169 (438)
T COG0612 93 FTSFDYTVYYLS--VLPDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYG-NHPLGR 169 (438)
T ss_pred cccchhhhhhhh--hchhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhc-cCCCCC
Confidence 999999985544 56789999999999999999999999999999999999999999977666666666555 554
Q ss_pred CCCCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCCCCCCCcc
Q 000890 889 FVEPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFRPSPSDLHF 968 (1237)
Q Consensus 889 ~~~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 (1237)
...|+.++|+++|.++|++||++||.|+||+|+||||++.+++..+++++||.|+....+ ..... . +.....
T Consensus 170 ~~~G~~e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~---~~~~~--~---~~~~~~ 241 (438)
T COG0612 170 PILGTEESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPP---PKIPP--E---PPLGPE 241 (438)
T ss_pred CCCCCHHHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCC---CCCCC--c---cccCCC
Confidence 457899999999999999999999999999999999999999999999999999962111 11110 0 111111
Q ss_pred eeEEec----CCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCC-chH-
Q 000890 969 QQVFLK----DTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHP-LFF- 1042 (1237)
Q Consensus 969 ~~~~~~----~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 1042 (1237)
..+.+. ....++.+.++++.+.. .++ ++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~g~~~~~~---------------------------------------------~~~~~~~~ 276 (438)
T COG0612 242 RVVRVNDPEQPDLEQAWLALGYPGPDY---------------------------------------------DSPDDYAA 276 (438)
T ss_pred ceEEecCCCCchhhhhhhhccccCcCc---------------------------------------------CcchhhHH
Confidence 222211 12234455555554421 111 111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEecCcccHHHHHHHHHHHHHhhhhCC---CCH
Q 000890 1043 -GITMGLLAEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTSPPGKVHKAVDACKNVLRGLHSNR---IVQ 1118 (1237)
Q Consensus 1043 -~~~~~lL~~~l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~---it~ 1118 (1237)
.+...+|++.+.||||..+||+.|++|++++....+. +.|.+.+++.+++.+.+.+.+.+.+++..+.... +|+
T Consensus 277 ~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~ 354 (438)
T COG0612 277 LLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLS--DSGLFSIYAGTAPENPEKTAELVEEILKALKKGLKGPFTE 354 (438)
T ss_pred HHHHHHHhCCCcchHHHHHHHHhcCceeeecccccccc--ccCCceEEEEecCCChhhHHHHHHHHHHHHHHHhccCCCH
Confidence 2334477777889999999999999999997545432 6788999999998888888888888888887754 999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCCceEEEEeec
Q 000890 1119 RELDRAKRTLLMRHEAEIKSNAYWLGLLAHLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDEDSLYSCIGIA 1198 (1237)
Q Consensus 1119 ~ELe~aK~~l~~~~~~~~~s~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~~~vvG~~ 1198 (1237)
++++.+|..+...+....+++...+..+..+...+... ....++.+.|++||++||++++++++.++...++++|..
T Consensus 355 ~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~vt~~dv~~~a~~~~~~~~~~~~~~~p~ 431 (438)
T COG0612 355 EELDAAKQLLIGLLLLSLDSPSSIAELLGQYLLLGGSL---ITLEELLERIEAVTLEDVNAVAKKLLAPENLTIVVLGPE 431 (438)
T ss_pred HHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHhcCCc---cCHHHHHHHHHhcCHHHHHHHHHHhcCCCCcEEEEEccc
Confidence 99999999999999888899998888888777766554 667899999999999999999999987766778888886
Q ss_pred CCCC
Q 000890 1199 GAQA 1202 (1237)
Q Consensus 1199 ~~~~ 1202 (1237)
+...
T Consensus 432 ~~~~ 435 (438)
T COG0612 432 KALK 435 (438)
T ss_pred cccc
Confidence 5443
No 11
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.6e-38 Score=334.44 Aligned_cols=418 Identities=15% Similarity=0.187 Sum_probs=339.8
Q ss_pred CeEEEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcceeeeee
Q 000890 732 GITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHLINCSL 811 (1237)
Q Consensus 732 ~i~~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~~~~~~ 811 (1237)
+.+..+|+||++|....+ ......+.+++++|++.|++++.|.+||++||.|+|+ ++.+...++..+++.|.-++.
T Consensus 33 ~t~vttL~NGlrVaTE~~--~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT--~~Rs~~alElEieniGahLNA 108 (467)
T KOG0960|consen 33 ETEVTTLPNGLRVATEHN--SASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGT--KNRSQAALELEIENIGAHLNA 108 (467)
T ss_pred cceEEEcCCCcEEEeccC--CCcceEEEEEeccCccccccccccHHHHHHHHHhcCC--CcchhHHHHHHHHHHHHHhcc
Confidence 356779999999998775 4788999999999999999999999999999999996 999999999999999999999
Q ss_pred ecCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCC--CC
Q 000890 812 ESTEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDE--RF 889 (1237)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--~~ 889 (1237)
++++|.+. |..++..+++++++++|++++.+..+.+.+|+++|..++.+++.-..+....+.+.+....|.|.+ +.
T Consensus 109 ytSReqT~--yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~t 186 (467)
T KOG0960|consen 109 YTSREQTV--YYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRT 186 (467)
T ss_pred ccccccee--eehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCccccc
Confidence 99999998 778899999999999999999999999999999999999999887777767777777777777765 35
Q ss_pred CCCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCCCCCCCcce
Q 000890 890 VEPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFRPSPSDLHFQ 969 (1237)
Q Consensus 890 ~~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1237)
..|+.+.|++|+.+||++|...||.+.+|+++.+|.++++++.+++++|||.++....+..++..++.. ..+.
T Consensus 187 ilGp~enI~si~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~~~~~~~~~-------Ftgs 259 (467)
T KOG0960|consen 187 ILGPSENIKSISRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDKVPLVPPAR-------FTGS 259 (467)
T ss_pred ccChhhhhhhhhHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcCCCCCCCcc-------ccCc
Confidence 789999999999999999999999999999999999999999999999999987532221111111221 2233
Q ss_pred eEEecC-CccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCchHHHHH--
Q 000890 970 QVFLKD-TDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPLFFGITM-- 1046 (1237)
Q Consensus 970 ~~~~~~-~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1046 (1237)
.+...+ +-+.+++.++..+. .+.|||++.+.+
T Consensus 260 EvR~rdd~lP~a~~AiAVEG~---------------------------------------------~w~~pD~~~l~van 294 (467)
T KOG0960|consen 260 EVRVRDDDLPLAHIAIAVEGV---------------------------------------------SWAHPDYFALMVAN 294 (467)
T ss_pred eeeecCCCCchhheeeeEecC---------------------------------------------CcCCccHHHHHHHH
Confidence 444444 33677777777553 347888775543
Q ss_pred HHHHHH---------HHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEec-CcccHHHHHHHHHHHHHhhhhCCC
Q 000890 1047 GLLAEI---------INSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTS-PPGKVHKAVDACKNVLRGLHSNRI 1116 (1237)
Q Consensus 1047 ~lL~~~---------l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~-~p~~~~~~~~~~~~~l~~l~~~~i 1116 (1237)
.++|.+ ..++|-+.+-+ ..++-+..++...| .++|+|++|+.| ++.+++.++..+.+++.+|.. .+
T Consensus 295 ~iiG~wdr~~g~g~~~~s~La~~~~~-~~l~~sfqsFnt~Y--kDTGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~-~v 370 (467)
T KOG0960|consen 295 TIIGNWDRTEGGGRNLSSRLAQKIQQ-DQLCHSFQSFNTSY--KDTGLWGIYFVTDNLTMIDDLIHSVLKEWMRLAT-SV 370 (467)
T ss_pred HHhhhhhcccCCccCCccHHHHHHHH-HHHHHHHhhhhccc--ccccceeEEEEecChhhHHHHHHHHHHHHHHHHh-hc
Confidence 366653 35899888888 47777776654444 389999999999 889999999999999999997 79
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCCceEEEEe
Q 000890 1117 VQRELDRAKRTLLMRHEAEIKSNAYWLGLLAHLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDEDSLYSCIG 1196 (1237)
Q Consensus 1117 t~~ELe~aK~~l~~~~~~~~~s~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~~~vvG 1196 (1237)
|+.|++|||+++..++...+++..-.+..+. ..-+..+..-...+..++|++||++||++++.+|+.+.+..++.+|
T Consensus 371 teaEV~RAKn~Lkt~Lll~ldgttpi~ediG---rqlL~~Grri~l~El~~rId~vt~~~Vr~va~k~iyd~~iAia~vG 447 (467)
T KOG0960|consen 371 TEAEVERAKNQLKTNLLLSLDGTTPIAEDIG---RQLLTYGRRIPLAELEARIDAVTAKDVREVASKYIYDKDIAIAAVG 447 (467)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCCchHHHHH---HHHhhcCCcCChHHHHHHHhhccHHHHHHHHHHHhhcCCcceeeec
Confidence 9999999999999999988888766666553 2222223334467899999999999999999999988888899999
Q ss_pred ecCCCCCCcccccccccccCCCCCcccccCCCcccc
Q 000890 1197 IAGAQAGDEETASSEEESDEGYPGGVIPVGRGLSTM 1232 (1237)
Q Consensus 1197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1232 (1237)
..+. +| -|..+..|||.|
T Consensus 448 ~ie~-----------------lp-dy~~irs~m~w~ 465 (467)
T KOG0960|consen 448 PIEG-----------------LP-DYNRIRSGMSWM 465 (467)
T ss_pred cccc-----------------Cc-hHHHHhccchhh
Confidence 8643 33 556667777766
No 12
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.8e-35 Score=327.19 Aligned_cols=865 Identities=16% Similarity=0.169 Sum_probs=483.1
Q ss_pred cCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChhh---Hhhc----CCeEEEEecCceEE
Q 000890 192 RNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK---LLGT----GARSNAYTDFHHTV 264 (1237)
Q Consensus 192 ~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~~---l~~~----G~~~na~t~~d~t~ 264 (1237)
..|++|.+.+.+++- |.-.+.|. .|..+..|+.|-|||+.|+||++||. |... -+++||+|+.|+|+
T Consensus 27 ~Tkl~va~~~~pts~--vhG~f~v~----TEa~~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l~dtNAwTDtD~T~ 100 (1022)
T KOG0961|consen 27 NTKLRVAIGEVPTSM--VHGAFSVV----TEADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADTNAWTDTDHTA 100 (1022)
T ss_pred ccceEEEEeecCCcc--eeeeEEee----eeecCCCCCchhHHHHhhhccccCCcccHHHHhhcchhcccccccccCcce
Confidence 458999999887663 23344443 56778899999999999999999983 3332 34799999999999
Q ss_pred EEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHH----------HHHHHHHHHhccChHHH-HHHHHHHHhcc
Q 000890 265 FHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKE----------RRAILSELQMMNTIEYR-VDCQLLQHLHS 333 (1237)
Q Consensus 265 ~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~e----------k~~v~~e~~~~~~~~~~-~~~~~~~~l~~ 333 (1237)
|.+++.- .+.|-++|.++.|-+.+|.+.++.|..| +++|++||+..++.... ........+|+
T Consensus 101 YtLStag------~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP 174 (1022)
T KOG0961|consen 101 YTLSTAG------SDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYP 174 (1022)
T ss_pred EEeeccc------ccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecC
Confidence 9999875 4789999999999999999999999876 89999999987654444 44555666787
Q ss_pred CCCCCCCCCCCCHHHhcccCHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q 000890 334 ENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTPTSSAFG 413 (1237)
Q Consensus 334 ~~~~~~~~~~G~~~~i~~it~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~p~~~~ 413 (1237)
....|....+|-+..+..+|.|.+++||+++|+|+||+++|.|.|++ ++++...+..-..++......|...+.| |+
T Consensus 175 ~~sgY~~eTGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v~~-d~lL~~m~~~~neile~~s~vP~~~~rP--f~ 251 (1022)
T KOG0961|consen 175 PFSGYAVETGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMVDH-DQLLEIMNNVENEILEHMSTVPDHFPRP--FS 251 (1022)
T ss_pred CCCCceeccCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCcCH-HHHHHHHHHHHhhhhhccccCCCCCCCC--cc
Confidence 65555457899999999999999999999999999999999999998 9988766544333333222222222233 32
Q ss_pred ccccccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCcccccccCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Q 000890 414 AMANFLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSLSGSGADIPVNKVRTYGDLRNVLMKRIFLSAL 493 (1237)
Q Consensus 414 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ll~~l~~~~l 493 (1237)
.. .....++... ...+-+......+..+.++|..+...+-... .....+..++... ....+
T Consensus 252 ~t------n~~~~i~e~t---------~~tVefp~~Des~G~v~~aW~g~s~sD~~t~---~a~~vL~dyls~s-avapf 312 (1022)
T KOG0961|consen 252 FT------NALSDIKEST---------VHTVEFPTDDESRGAVEVAWFGHSPSDLETH---SALHVLFDYLSNS-AVAPF 312 (1022)
T ss_pred cc------cCcccCCccc---------eeeeecCCcccccceEEEEEcCCCHHHhhhH---HHHHHHHHHhccc-ccccc
Confidence 10 0111111110 1111122223456678999988765421111 1111222222111 11222
Q ss_pred HHHHHHhhhcCCCCeeEeecccCccccccccEEEEEEEecCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q 000890 494 HFRINTRYKSSNPPFTSVEMDHSDSGREGCTVTTLTVTAEPKNWQSAVRVAVQEVRRLKEFGVTNGELTRYMDALLKDSE 573 (1237)
Q Consensus 494 ~~rl~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~a~~~i~~el~~l~~~g~t~~EL~~ak~~l~~~~~ 573 (1237)
.+.+ +.-+++.+.+++...+ .+. .|.+-....++..++.++....+++.+.. ...|+-+.+.....+.+-
T Consensus 313 ~~~f---VeieDP~assv~f~~~-~~v-rc~i~L~f~gVP~EKi~~~~~k~l~~l~e--t~~iDm~Rm~~~i~~t~~--- 382 (1022)
T KOG0961|consen 313 QKDF---VEIEDPLASSVSFHIA-EGV-RCDIRLNFAGVPVEKIDECAPKFLDKLVE--TANIDMERMGYLIDQTIL--- 382 (1022)
T ss_pred ccce---EEecCccccceeeeee-ccc-ceeEEEeecCCcHHHhhhhhHHHHHHHHH--hcccCHHHHHHHHHHHHH---
Confidence 2221 1123344444433222 221 12233334577778887777777777653 334655544444333332
Q ss_pred HHHHhhccCCCchhhHHHHHhhcCCCcccChH-----HHH--HHHHHHhCCCCHHHHHHHHHHHHHhhhcCCCCCCCCCc
Q 000890 574 HLAAMIDNISSVDNLDFIMESDALGHTVMDQR-----QGH--ASLVAVAGTITLEEVNSIGAEVLEFISDFGRPSAPVPA 646 (1237)
Q Consensus 574 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~i~~vT~edv~~~a~~~l~~~~~~~~~~~~~~~ 646 (1237)
+..-++++....+ +|..+...++++... ..+ -++.+.+.+....|.+++.++||. .++.
T Consensus 383 ~yL~nlE~n~~s~----fms~ii~d~~ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fv----------en~s 448 (1022)
T KOG0961|consen 383 NYLVNLETNAPSD----FMSHIIGDQLYGNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFV----------ENPS 448 (1022)
T ss_pred HHHHhhhcCChHH----HHHHHhhhhhccCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhc----------cCCC
Confidence 2245566655544 344444444444211 111 235667778889999999999986 2466
Q ss_pred eEEEeccccccccCCCC--------ccccCChHHHHHHHHcccCCCCCCCCcccCCccccchhHHHHHHhccCCCCCCCC
Q 000890 647 AIVACVPKKVHIDGIGE--------TEFKISPNEIVDAIKSGMEEPIEAEPELEVPKELISASELEELKLRCRPSFIPPR 718 (1237)
Q Consensus 647 ~~~~~~P~~~~~~~~~~--------~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~p~~ 718 (1237)
++++..|..+..+.... ....+.++.+.++.+.....+. ..+...|..++....+.+ +..-.|.-..
T Consensus 449 ~tVia~Ps~em~e~i~kE~~~~i~~r~~~lg~~gle~l~k~L~~ak~--~N~~~~p~~ll~~f~I~~---peS~ef~~~~ 523 (1022)
T KOG0961|consen 449 ATVIAVPSEEMVEKIAKEEEKRIAARCEKLGKKGLEELGKSLEAAKL--ENTANHPSALLLDFLIVK---PESLEFFDRF 523 (1022)
T ss_pred eEEEecCcHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHhhh--cccCCCCHHHHhheeccC---chheeeeecc
Confidence 88888897654443311 1112222222222221111111 112233333332211100 0000000000
Q ss_pred CCCccee-cc-cCC-CCeEEEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhc------CCc
Q 000890 719 PELNVTK-VH-DKE-SGITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSE------GGR 789 (1237)
Q Consensus 719 ~~~~~~~-~~-~~~-~~i~~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~------gg~ 789 (1237)
+...+.. .+ +.+ ..++...++| ....+.-+...... +.+.|-..++..+.....+..++..+++. |+.
T Consensus 524 ~v~t~~s~~pfdne~~~~~~T~~~~-fp~fi~l~h~ps~F--vel~fl~dss~i~~sl~pYl~~f~~l~~~~pa~ldgti 600 (1022)
T KOG0961|consen 524 PVQTLTSNSPFDNELTPQQSTFLAQ-FPFFINLHHCPSKF--VELFFLLDSSNISISLRPYLFLFTDLLFESPAMLDGTI 600 (1022)
T ss_pred ceeeccCCCCCCccccceeeccccc-CCceeecccCchHH--HhHhhhhccccCchhhhhHHHHHHHHHhcCHHHhcCCC
Confidence 0000000 00 111 1122223333 33322222222233 44444444555555667777777666553 210
Q ss_pred -CC-CCCHHHHHHHHhcceeeeeeecCcceE---EEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 000890 790 -VG-KFSREQVELFCVNHLINCSLESTEEFI---AMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYR 864 (1237)
Q Consensus 790 -~~-~~s~~el~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~ 864 (1237)
+. ..+.+++++.+....+..+++++...+ .+.+++.+..++.+...+|+.-++....||+..+-...+.++.++.
T Consensus 601 ptp~~~s~~~v~~~~~s~~id~si~~g~~G~~~~lvn~~Ikv~a~~Y~~~v~Wi~~~l~~~VfD~~Ri~~~~~~~l~~i~ 680 (1022)
T KOG0961|consen 601 PTPVLTSADDVAKHFTSDLIDHSIQVGVSGLYDRLVNLRIKVGADKYPLLVKWIQIFLQGVVFDPSRIHQCAQKLLGEIR 680 (1022)
T ss_pred CcchhhhHHHHHHHHHhhhhhhhhcccccccchhheeEEEEEccCCcchhHHHHHHHhhhhccCHHHHHHHHHHHHhhhh
Confidence 11 124567777665555544443332111 2447888888999999999999999999999988888888888887
Q ss_pred cCcCChHHHHHHHHHHHHhcCCCCC--CCC---CHhHHhhcC-------------HHHHHHHHHhhccCCCeEEEEEcCC
Q 000890 865 SIPKSLERSTAHKLMLAMLNGDERF--VEP---TPKSLENLN-------------LKSVKEAVMNQFVGNNMEVSIVGDF 926 (1237)
Q Consensus 865 ~~~~~~~~~~a~~~~~~~~~~~~~~--~~~---t~~~l~~lt-------------~e~l~~~~~~~~~~~n~~l~IvGd~ 926 (1237)
.+..+. ..++..+...+++++... ... -++-++.+. .++++. | .+..+.+.+.|+||+
T Consensus 681 ~~KRdg-~~vlss~~~~~lY~~~slk~s~d~L~~Ek~l~ei~~~v~n~~~~Il~~~e~mR~-y--~l~~n~~~ihvvgDI 756 (1022)
T KOG0961|consen 681 DRKRDG-CTVLSSAVASMLYGKNSLKISFDELVLEKLLEEISKDVMNNPEAILEKLEQMRS-Y--ALFSNGVNIHVVGDI 756 (1022)
T ss_pred hhhcCc-cEehHHHHHHHHhcccchhhcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-H--HHhhcceEEEEEeeh
Confidence 766665 345555666666665432 111 122222221 133333 1 223477899999999
Q ss_pred C-HHHHHHHHHHhhcccCCCCCCCCcCccCCcccCC----CCCCCcceeEEecCCc--cceeEEEecCCCCCCCcccCCc
Q 000890 927 S-EEEIESCILDYLGTVRATNDSKREHEYSPILFRP----SPSDLHFQQVFLKDTD--ERACAYIAGPAPNRWGFTVDGM 999 (1237)
Q Consensus 927 d-~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~a~v~i~~~~~~~~~~~~~~~ 999 (1237)
+ .++...-+...+....-+.+. .+... .|.. +.........++...+ +.+.++...|+.
T Consensus 757 ~kid~~~~~Wn~l~~~~~~~nP~---~~f~~-tf~~~~~~s~e~gsssk~~~I~~p~sESs~l~~sip~~---------- 822 (1022)
T KOG0961|consen 757 DKIDPKMLSWNWLQADPRFGNPG---HQFSA-TFEAGENVSLELGSSSKELLIGVPGSESSFLYQSIPLD---------- 822 (1022)
T ss_pred hcCCccccCchhhhcCcccCCch---hhccc-ccccCcccceeccCCcceeEecCCCccccceeeecccc----------
Confidence 8 333332233333333222111 00000 0000 0000000111111111 122222222211
Q ss_pred cccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCchHHHHHHHHHHHH---HHHHHHHHHhhcCCeeeEeeeee
Q 000890 1000 DLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPLFFGITMGLLAEII---NSRLFTTVRDSLGLTYDVSFELN 1076 (1237)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~l---~srL~~~lRe~~GlaYsv~~~~~ 1076 (1237)
..+.+|.+. ...++++.+ .+.+|+.||. .|++||+.....
T Consensus 823 ----------------------------------~~w~dpel~--~~~l~~~YL~~~eGPfW~~IRG-~GLAYGanm~~~ 865 (1022)
T KOG0961|consen 823 ----------------------------------ANWNDPELI--PAMLFGQYLSQCEGPFWRAIRG-DGLAYGANMFVK 865 (1022)
T ss_pred ----------------------------------cccCCcchh--HHHHHHHHHHhcccchhhhhcc-cchhccceeEEe
Confidence 123344432 334555555 5899999999 899999998766
Q ss_pred ccccCCceEEEEEEecCcccHHHHHHHHHHHHHhhhh--CCCCHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHhcC
Q 000890 1077 LFDRLKLGWYVISVTSPPGKVHKAVDACKNVLRGLHS--NRIVQRELDRAKRTLLMRHEAEIKSN--AYWLGLLAHLQAS 1152 (1237)
Q Consensus 1077 ~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~--~~it~~ELe~aK~~l~~~~~~~~~s~--~~~~~~l~~~~~~ 1152 (1237)
. +.+.+.+.+++.| ++.++.+.-+++++.+.+ ..|++.+++.||...+..+... +.+ ..-+.........
T Consensus 866 ~----d~~~~~~~iyr~a-d~~kaye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~-Eng~~~~a~~~~~l~~~~ 939 (1022)
T KOG0961|consen 866 P----DRKQITLSIYRCA-DPAKAYERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKR-ENGTVSGAAKISILNNFR 939 (1022)
T ss_pred c----cCCEEEEEeecCC-cHHHHHHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHH-hccceechHHHHHHHHHH
Confidence 4 5688888888888 567888889999999876 4699999999999998876543 211 1111111111122
Q ss_pred CCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcC
Q 000890 1153 SVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRV 1186 (1237)
Q Consensus 1153 ~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~ 1186 (1237)
+.+. ..-..+.+++.+||.+|+.+..+.|+.
T Consensus 940 q~~~---~fn~~~leri~nvT~~~~~~~~~~y~~ 970 (1022)
T KOG0961|consen 940 QTPH---PFNIDLLERIWNVTSEEMVKIGGPYLA 970 (1022)
T ss_pred hcCC---cccHHHHHHHHHhhHHHHHHhccccee
Confidence 2332 233578899999999999999998854
No 13
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.2e-36 Score=318.65 Aligned_cols=393 Identities=18% Similarity=0.225 Sum_probs=300.4
Q ss_pred CcEEEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChh------hHhhcCCeEEEEe
Q 000890 185 KLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKRE------KLLGTGARSNAYT 258 (1237)
Q Consensus 185 ~~~~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~------~l~~~G~~~na~t 258 (1237)
+.+..+|+||++|..-+.+.+- +.+.|+|++||++|...-.|++||||.|+|+.|.+++ .||.+|+...+.|
T Consensus 24 ~~kvttL~NGlkvase~~pg~f--~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cqs 101 (472)
T KOG2067|consen 24 NTKVTTLPNGLKVASENTPGQF--CTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQS 101 (472)
T ss_pred cceeeecCCccEEeccCCCCCc--eEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCcccccc
Confidence 6788999999999986665543 4899999999999999999999999999999999986 4789999999999
Q ss_pred cCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHhccCCCC
Q 000890 259 DFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMN-TIEYRVDCQLLQHLHSENKL 337 (1237)
Q Consensus 259 ~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~-~~~~~~~~~~~~~l~~~~~~ 337 (1237)
++|.+.|.+++.+ ++++.++.+|+|.+.+|.|.++|++.+|..|.-|+..-. .+.-.+.+-++.+.|.++..
T Consensus 102 SRetm~Yaas~~~-------~~v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntl 174 (472)
T KOG2067|consen 102 SRETMMYAASADS-------DGVDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTL 174 (472)
T ss_pred cHhhhHHHHHhhh-------cccHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcc
Confidence 9999999999998 889999999999999999999999999999999998754 45555677788889999888
Q ss_pred CCCCCCCCHHHhcccCHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCcccccccc
Q 000890 338 SKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTPTSSAFGAMAN 417 (1237)
Q Consensus 338 ~~~~~~G~~~~i~~it~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~p~~~~~~~~ 417 (1237)
+ .+..++.+.|..|+.+.|.+|.+++|+|+||++..|| |++ +++++.++++|++|++...+... ..+.-|
T Consensus 175 g-~pl~cp~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vG-V~h-eelv~~~~~~~~~~~s~~~p~i~--~~~aQY----- 244 (472)
T KOG2067|consen 175 G-LPLLCPEENIDKINREVLEEYLKYFYTPERMVLAGVG-VEH-EELVEIAEKLLGDLPSTKVPPID--ESKAQY----- 244 (472)
T ss_pred c-ccccCChhhhhhhhHHHHHHHHHhcCChhheEeeecC-CCH-HHHHHHHHHHhccCCccCCCCcc--cchhhc-----
Confidence 8 4789999999999999999999999999999999999 998 99999999999999985433222 111000
Q ss_pred ccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCcccccccCCCCCCCCCcccccHHHHHHHHHHH--HHH-----
Q 000890 418 FLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSLSGSGADIPVNKVRTYGDLRNVLMKR--IFL----- 490 (1237)
Q Consensus 418 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ll~~--l~~----- 490 (1237)
..+. ... ..+-.++.. ....+.+.+++..++..+. +.-.+..+ +.|+++ .|+
T Consensus 245 ---------tGG~--~~~--~~d~~~~~~---g~EltHv~lg~Eg~~~~de----D~v~~avL-q~lmGGGGSFSAGGPG 303 (472)
T KOG2067|consen 245 ---------TGGE--LKI--DTDAPQVTG---GPELTHVVLGFEGCSWNDE----DFVALAVL-QMLMGGGGSFSAGGPG 303 (472)
T ss_pred ---------cccc--ccc--CCCCccccC---ccceeeeeEeeccCCCCCh----hHHHHHHH-HHHhcCCcccCCCCCC
Confidence 0000 000 001011100 0123346667776665432 11111122 223322 111
Q ss_pred HHHHHHHHHhhhcCCCCee---EeecccCccccccccEEEEEEEecCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 000890 491 SALHFRINTRYKSSNPPFT---SVEMDHSDSGREGCTVTTLTVTAEPKNWQSAVRVAVQEVRRLKEFGVTNGELTRYMDA 567 (1237)
Q Consensus 491 ~~l~~rl~~~l~~~~~~~~---~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~a~~~i~~el~~l~~~g~t~~EL~~ak~~ 567 (1237)
.++.+||+..+-....+.| +++.+|+|.| .|.+++.+.|+.+.++++.+.+|+-.+.. |++++||+|||++
T Consensus 304 KGMySrLY~~vLNry~wv~sctAfnhsy~DtG-----lfgi~~s~~P~~a~~aveli~~e~~~~~~-~v~~~el~RAK~q 377 (472)
T KOG2067|consen 304 KGMYSRLYLNVLNRYHWVYSCTAFNHSYSDTG-----LFGIYASAPPQAANDAVELIAKEMINMAG-GVTQEELERAKTQ 377 (472)
T ss_pred cchHHHHHHHHHhhhHHHHHhhhhhccccCCc-----eeEEeccCCHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHH
Confidence 2456666555433334444 3455666665 69999999999999999999999999887 6999999999999
Q ss_pred HHHHHHHHHHhhccCCCchhhHHHHHhhcCCCcccChHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 000890 568 LLKDSEHLAAMIDNISSVDNLDFIMESDALGHTVMDQRQGHASLVAVAGTITLEEVNSIGAEVLE 632 (1237)
Q Consensus 568 l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~ 632 (1237)
+.+.+ .++++++.- ..+.+.++.+..+.....+++.+.|+++|++||.+++.++|.
T Consensus 378 lkS~L---lMNLESR~V------~~EDvGRQVL~~g~rk~p~e~~~~Ie~lt~~DI~rva~kvlt 433 (472)
T KOG2067|consen 378 LKSML---LMNLESRPV------AFEDVGRQVLTTGERKPPDEFIKKIEQLTPSDISRVASKVLT 433 (472)
T ss_pred HHHHH---Hhcccccch------hHHHHhHHHHhccCcCCHHHHHHHHHhcCHHHHHHHHHHHhc
Confidence 98765 677776443 256666665555666778899999999999999999999997
No 14
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=2.2e-33 Score=340.83 Aligned_cols=335 Identities=14% Similarity=0.168 Sum_probs=268.0
Q ss_pred EEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHH-HHHHHHhcceeeeeeec
Q 000890 735 QLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSRE-QVELFCVNHLINCSLES 813 (1237)
Q Consensus 735 ~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~-el~~~~~~~~~~~~~~~ 813 (1237)
.++|+||++|++.+++ ..+.+.+.+++++|+.+|+.+..|++|+++||+++|+ ++++.. ++...++..|.+++.+|
T Consensus 2 ~~tL~NGLrVllv~~p-~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT--~~~~~~~~i~~~le~lGG~lNA~T 78 (696)
T TIGR02110 2 RITLPNGLRVHLYHQP-DAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGG--ERFQGDDRLMPWVQRQGGQVNATT 78 (696)
T ss_pred eEEcCCCCEEEEEECC-CCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCC--CCCCcHHHHHHHHHHhCCeEEEEE
Confidence 4689999999999864 5789999999999999999999999999999999996 899975 79999999999999999
Q ss_pred CcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCCC---C
Q 000890 814 TEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDERF---V 890 (1237)
Q Consensus 814 ~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~---~ 890 (1237)
+.|.+. |+++++.++++.+|+++.+++.+|.|++++|+++|++++++++...++|.......+. ..++++|+| .
T Consensus 79 s~d~T~--y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~-~~l~~~HPy~~~~ 155 (696)
T TIGR02110 79 LERTTA--FFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALL-DALQAGHPLRRFH 155 (696)
T ss_pred cCCeEE--EEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH-HHcCCCCCCCCCC
Confidence 999998 6667788999999999999999999999999999999999999888888654444444 455566654 5
Q ss_pred CCCHhHHhhcC---HHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCCCCCCCc
Q 000890 891 EPTPKSLENLN---LKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFRPSPSDLH 967 (1237)
Q Consensus 891 ~~t~~~l~~lt---~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (1237)
.|+.++|++++ .++|++||+++|.++||+++|+||++.++++++++++|+.|+.+.... ....++ .....
T Consensus 156 iGt~esL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~--~~~~~p-----~~~~~ 228 (696)
T TIGR02110 156 AGSRDSLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECA--QAPPAP-----LLRFD 228 (696)
T ss_pred CCCHHHHhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCC--CCCCCC-----CCCCc
Confidence 78999999876 999999999999999999999999999999999999999998654321 000011 10111
Q ss_pred ceeEEecCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCchHHHHHH
Q 000890 968 FQQVFLKDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPLFFGITMG 1047 (1237)
Q Consensus 968 ~~~~~~~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1237)
.........++..+.+.+++.. ..+++.+.++..
T Consensus 229 -~~~~~~~~~~q~~l~~~~p~~~---------------------------------------------~~d~~al~lL~~ 262 (696)
T TIGR02110 229 -RLTLAGGSEPRLWLLFALAGLP---------------------------------------------ATARDNVTLLCE 262 (696)
T ss_pred -eeEEEecCcceEEEEEeecCCC---------------------------------------------CCChHHHHHHHH
Confidence 1222223334555555555432 123334456667
Q ss_pred HHHHHHHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEec---CcccHHHHHHHHHHHHHhhhhC--CCCHHHHH
Q 000890 1048 LLAEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTS---PPGKVHKAVDACKNVLRGLHSN--RIVQRELD 1122 (1237)
Q Consensus 1048 lL~~~l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~---~p~~~~~~~~~~~~~l~~l~~~--~it~~ELe 1122 (1237)
+|++..+++|+.+||+ +|++|++++++ .+...+.+.|.|++.+ .+++.+++++.+.++|+.++++ +++.+|++
T Consensus 263 iLg~g~sSrL~~~LRe-~GLaysV~s~~-~~~~~g~~lf~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~ 340 (696)
T TIGR02110 263 FLQDEAPGGLLAQLRE-RGLAESVAATW-LYQDAGQALLALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYA 340 (696)
T ss_pred HhCCCcchHHHHHHHH-CCCEEEEEEec-cccCCCCcEEEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 8888889999999997 89999999865 3332334589999887 3568999999999999999887 89999999
Q ss_pred HHHHHHHH
Q 000890 1123 RAKRTLLM 1130 (1237)
Q Consensus 1123 ~aK~~l~~ 1130 (1237)
++|..-..
T Consensus 341 rlk~~~~~ 348 (696)
T TIGR02110 341 QLAQRRFQ 348 (696)
T ss_pred HHHHhhhh
Confidence 99887433
No 15
>PRK15101 protease3; Provisional
Probab=100.00 E-value=7.1e-32 Score=355.96 Aligned_cols=410 Identities=15% Similarity=0.112 Sum_probs=308.8
Q ss_pred CCeEEEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCC-HHHHHHHHhcceeee
Q 000890 731 SGITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFS-REQVELFCVNHLINC 809 (1237)
Q Consensus 731 ~~i~~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s-~~el~~~~~~~~~~~ 809 (1237)
..++.++|+||++|++.+++ ..+.+.+.+.+++|+.+|+.+..|++|+++||+++|+ ++++ ..++..+++.+|.++
T Consensus 42 ~~~~~~~L~NGL~v~l~~~~-~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT--~~~p~~~~~~~~l~~~Gg~~ 118 (961)
T PRK15101 42 RQYQAIRLDNGMTVLLVSDP-QAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGS--KKYPQPDSLAEFLKKHGGSH 118 (961)
T ss_pred cceEEEEeCCCCEEEEEeCC-CCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCC--ccCCCcchHHHHHHHhCCCc
Confidence 45778899999999999875 5788999999999999999999999999999999996 8996 578999999999999
Q ss_pred eeecCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCC-
Q 000890 810 SLESTEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDER- 888 (1237)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~- 888 (1237)
++.|+.+.+. |++.++.++++.+|+++.+++.+|.|++++++++|+.+.++++...+++...+.. ++....+++|+
T Consensus 119 NA~T~~d~T~--y~~~~~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~-~~~~~~~~~hp~ 195 (961)
T PRK15101 119 NASTASYRTA--FYLEVENDALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQ-VSAETINPAHPG 195 (961)
T ss_pred cceECCCceE--EEEEcCHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHH-HHHhhCCCCCCc
Confidence 9999999998 6667788999999999999999999999999999999999999877777665444 44444556665
Q ss_pred --CCCCCHhHHhhc----CHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCCC
Q 000890 889 --FVEPTPKSLENL----NLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFRPS 962 (1237)
Q Consensus 889 --~~~~t~~~l~~l----t~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~~ 962 (1237)
+..|+.++|+++ +.++|++||++||.|+||+++|+||++.++++++++++|+.|+.+.... +....+.+.+
T Consensus 196 ~~~~~G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~--~~~~~~~~~~- 272 (961)
T PRK15101 196 SRFSGGNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASV--PEITVPVVTD- 272 (961)
T ss_pred ccCCCCCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCC--CCCCCCCCCH-
Confidence 457899999997 6999999999999999999999999999999999999999998754221 0100111110
Q ss_pred CCCCcceeEEecCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCchH
Q 000890 963 PSDLHFQQVFLKDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPLFF 1042 (1237)
Q Consensus 963 ~~~~~~~~~~~~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1237)
......+......++..+.+.|+.|... ..+ ...+.
T Consensus 273 --~~~~~~~~~~~~~~~~~l~l~~~~p~~~------------------------------------~~~----~~~~~-- 308 (961)
T PRK15101 273 --AQKGIIIHYVPAQPRKVLRVEFRIDNNS------------------------------------AKF----RSKTD-- 308 (961)
T ss_pred --HHcCeEEEEEECCCCcEEEEEEecCCcH------------------------------------HHH----hhCHH--
Confidence 0111222222334566778888776310 000 00011
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEecCcc---cHHHHHHHHHHHHHhhhhCCCCHH
Q 000890 1043 GITMGLLAEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTSPPG---KVHKAVDACKNVLRGLHSNRIVQR 1119 (1237)
Q Consensus 1043 ~~~~~lL~~~l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~~p~---~~~~~~~~~~~~l~~l~~~~it~~ 1119 (1237)
.++..+|++...++|+..|+ ++|++|+++++...+...+.|.|.|++.+.|+ +.+++++.+.++|+.+++.+++++
T Consensus 309 ~~l~~ll~~~~~g~l~~~L~-~~gla~~v~s~~~~~~~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~ 387 (961)
T PRK15101 309 EYISYLIGNRSPGTLSDWLQ-KQGLAEGISAGADPMVDRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKS 387 (961)
T ss_pred HHHHHHhcCCCCCcHHHHHH-HcCccceeeeccccccCCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHH
Confidence 23445666655567777776 58999999987654333467999999999884 789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-hhhhhHHHHHHHHHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCCceEEEEeec
Q 000890 1120 ELDRAKRTLLMRHEAE-IKSNAYWLGLLAHLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDEDSLYSCIGIA 1198 (1237)
Q Consensus 1120 ELe~aK~~l~~~~~~~-~~s~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~~~vvG~~ 1198 (1237)
||+++|+.+..++... ...+......+... ..+.+ .+.+......++.+++++|+++++++ .+++..+++++..
T Consensus 388 el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~l~~~~~~~~~~~~~i~~~~~~l-~~~n~~i~~~~~~ 462 (961)
T PRK15101 388 YFDELAHVLDLDFRYPSITRDMDYIEWLADT-MLRVP---VEHTLDAPYIADRYDPKAIKARLAEM-TPQNARIWYISPQ 462 (961)
T ss_pred HHHHHHHHHhccccCCCCCChHHHHHHHHHH-hhhCC---HHHheeCchhhhcCCHHHHHHHHhhc-CHhHEEEEEEeCC
Confidence 9999999988776322 12222222333322 12223 24455667888999999999999874 5566667677764
Q ss_pred C
Q 000890 1199 G 1199 (1237)
Q Consensus 1199 ~ 1199 (1237)
.
T Consensus 463 ~ 463 (961)
T PRK15101 463 E 463 (961)
T ss_pred C
Confidence 3
No 16
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.98 E-value=1.3e-30 Score=278.08 Aligned_cols=403 Identities=15% Similarity=0.160 Sum_probs=316.2
Q ss_pred CeEEEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcceeeeee
Q 000890 732 GITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHLINCSL 811 (1237)
Q Consensus 732 ~i~~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~~~~~~ 811 (1237)
..+..+|+||++|...+++ .+-..+.++++.|+++|...-.|++|+++.+.|+++ .+++..++...++.+|.++++
T Consensus 24 ~~kvttL~NGlkvase~~p--g~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST--~~~~~~ei~~~LE~~GGn~~c 99 (472)
T KOG2067|consen 24 NTKVTTLPNGLKVASENTP--GQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKST--ERFSSKEILAELEKLGGNCDC 99 (472)
T ss_pred cceeeecCCccEEeccCCC--CCceEEEEEEecCccccCcCcccHHHHHHHHhhccc--cCCcHHHHHHHHHHhCCcccc
Confidence 3566799999999887754 778899999999999999999999999999999996 899988999999999999999
Q ss_pred ecCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCC--C
Q 000890 812 ESTEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDER--F 889 (1237)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~ 889 (1237)
.+++|.+. |..++.+++++.++++|.+.+.+|.|++++++.+|..+.-|+.....+|+-.+...+..+.|.++.. .
T Consensus 100 qsSRetm~--Yaas~~~~~v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~p 177 (472)
T KOG2067|consen 100 QSSRETMM--YAASADSDGVDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLP 177 (472)
T ss_pred cccHhhhH--HHHHhhhcccHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCccccc
Confidence 99999876 7778888999999999999999999999999999999998888877788666666667777766543 3
Q ss_pred CCCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCCCCCCCcce
Q 000890 890 VEPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFRPSPSDLHFQ 969 (1237)
Q Consensus 890 ~~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1237)
.+.+.+.|..|+.+.|..|.+.+|.|.+|++..|| ++++++.+++++||+.||....++.. .+.++..++
T Consensus 178 l~cp~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vG-V~heelv~~~~~~~~~~~s~~~p~i~---------~~~aQYtGG 247 (472)
T KOG2067|consen 178 LLCPEENIDKINREVLEEYLKYFYTPERMVLAGVG-VEHEELVEIAEKLLGDLPSTKVPPID---------ESKAQYTGG 247 (472)
T ss_pred ccCChhhhhhhhHHHHHHHHHhcCChhheEeeecC-CCHHHHHHHHHHHhccCCccCCCCcc---------cchhhcccc
Confidence 45678999999999999999999999999999999 99999999999999999975332110 111111112
Q ss_pred eEEec-------CCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCchH
Q 000890 970 QVFLK-------DTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPLFF 1042 (1237)
Q Consensus 970 ~~~~~-------~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1237)
...+. ..++-+++.+++.+.. .+++|+.
T Consensus 248 ~~~~~~d~~~~~~g~EltHv~lg~Eg~~---------------------------------------------~~deD~v 282 (472)
T KOG2067|consen 248 ELKIDTDAPQVTGGPELTHVVLGFEGCS---------------------------------------------WNDEDFV 282 (472)
T ss_pred ccccCCCCccccCccceeeeeEeeccCC---------------------------------------------CCChhHH
Confidence 11111 1124566777776543 2445554
Q ss_pred HH--HHHHHHHH-----------HHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEecCcccHHHHHHHHHHHHH
Q 000890 1043 GI--TMGLLAEI-----------INSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTSPPGKVHKAVDACKNVLR 1109 (1237)
Q Consensus 1043 ~~--~~~lL~~~-----------l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~ 1109 (1237)
.+ +..++|+. |-|||+.+|-.+..+.|++.++...|. ++|+|+|+.+++|+.+.+++..+-+++-
T Consensus 283 ~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~--DtGlfgi~~s~~P~~a~~aveli~~e~~ 360 (472)
T KOG2067|consen 283 ALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYS--DTGLFGIYASAPPQAANDAVELIAKEMI 360 (472)
T ss_pred HHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhcccc--CCceeEEeccCCHHHHHHHHHHHHHHHH
Confidence 33 22355442 569999999999999999999877765 8999999999999999999999999998
Q ss_pred hhhhCCCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCC
Q 000890 1110 GLHSNRIVQRELDRAKRTLLMRHEAEIKSNAYWLGLLAHLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDED 1189 (1237)
Q Consensus 1110 ~l~~~~it~~ELe~aK~~l~~~~~~~~~s~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~ 1189 (1237)
.+.. +++++||+|||.++...+...+++---.. .++..+-+..+.-...+++.+.|+++|++||.+++.+++..+
T Consensus 361 ~~~~-~v~~~el~RAK~qlkS~LlMNLESR~V~~---EDvGRQVL~~g~rk~p~e~~~~Ie~lt~~DI~rva~kvlt~~- 435 (472)
T KOG2067|consen 361 NMAG-GVTQEELERAKTQLKSMLLMNLESRPVAF---EDVGRQVLTTGERKPPDEFIKKIEQLTPSDISRVASKVLTGK- 435 (472)
T ss_pred HHhC-CCCHHHHHHHHHHHHHHHHhcccccchhH---HHHhHHHHhccCcCCHHHHHHHHHhcCHHHHHHHHHHHhcCC-
Confidence 8876 69999999999999999888887642111 122222222233345679999999999999999999997544
Q ss_pred ceEEEEeecCCCC
Q 000890 1190 SLYSCIGIAGAQA 1202 (1237)
Q Consensus 1190 ~~~~vvG~~~~~~ 1202 (1237)
..+...|+-....
T Consensus 436 p~va~~Gd~~~lp 448 (472)
T KOG2067|consen 436 PSVAAFGDGTGLP 448 (472)
T ss_pred ceeccCCcccCCc
Confidence 4455566644333
No 17
>PTZ00432 falcilysin; Provisional
Probab=99.93 E-value=6.1e-24 Score=276.00 Aligned_cols=413 Identities=10% Similarity=0.034 Sum_probs=273.8
Q ss_pred EecCCcEEEEEecCCC-CceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcce--eeeeeec
Q 000890 737 RLSNGIPINYKISKSE-AQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHL--INCSLES 813 (1237)
Q Consensus 737 ~L~NGv~v~~~~~~~~-~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~--~~~~~~~ 813 (1237)
...||++|++..++.. .+.+.+.+.|++|+ .+..|++|+++||++.|+ ++++..++...+...| ..+++.|
T Consensus 96 H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~----~d~~G~aH~LEH~~f~GS--~k~p~~~~~~~l~~~gl~~~lNA~T 169 (1119)
T PTZ00432 96 HKKTGLQVISLKTNDSSGKEMCFDFYVPTPP----HNDKGIPHILEHSVLSGS--KKYNYKDSFSLLVQGGFNSFLNAYT 169 (1119)
T ss_pred EcCCCCEEEEEecCCCccceeEEEEEecCCC----CCCcchhHHHHHHHhCCC--CCCCcccHHHHHHhcCcCCCccccC
Confidence 4679999998776532 23578899999996 356899999999999996 8999988888887666 4467789
Q ss_pred CcceEEEEEEEecCc-chHHHHHHHHHHHHhcCCCCHHHH-----------HHH--------------------HHHHHH
Q 000890 814 TEEFIAMEFRFTLRD-NGMRAAFQLLHMVLEHSVWLDDAF-----------DRA--------------------RQLYLS 861 (1237)
Q Consensus 814 ~~~~~~~~~~~~~~~-~~l~~~L~ll~~~l~~p~f~~~~~-----------~~~--------------------k~~~~~ 861 (1237)
+.|.++ |.+.+.. +++..+|+++.+.+.+|.|+++++ +++ +.++++
T Consensus 170 ~~D~T~--Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~ 247 (1119)
T PTZ00432 170 FKDRTS--YLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYS 247 (1119)
T ss_pred CCCceE--EEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHH
Confidence 999998 5555555 479999999999999999988753 221 778999
Q ss_pred HHHcCcCChHHHHHHHHHHHHhcCCCCC---CCCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHh
Q 000890 862 YYRSIPKSLERSTAHKLMLAMLNGDERF---VEPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDY 938 (1237)
Q Consensus 862 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~---~~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~ 938 (1237)
|++...++|...+...+...+| +++| ..|++++|.++|.++|++||+++|.|+|+.++|+||+|.+++.+++++|
T Consensus 248 Emk~~~~~p~~~~~~~~~~~lf--~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~~ 325 (1119)
T PTZ00432 248 EMKKRFSDPLSFGYSVIYQNLF--SNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDNY 325 (1119)
T ss_pred HHHHhhCCHHHHHHHHHHHHHh--CCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHHH
Confidence 9999989997766666666666 5543 4689999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcC--ccCCcccCCCCCCCcceeEE--e-cCCccceeEEEe-cCCCCCC-CcccCCccccccccCCCCC
Q 000890 939 LGTVRATNDSKREH--EYSPILFRPSPSDLHFQQVF--L-KDTDERACAYIA-GPAPNRW-GFTVDGMDLFKSIDNTSCS 1011 (1237)
Q Consensus 939 ~g~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~-~~~~~~a~v~i~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 1011 (1237)
|+.++......... ..........+....+..+. . ....++..+.++ |+.++.. +..
T Consensus 326 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~---------------- 389 (1119)
T PTZ00432 326 LTKHPKTGQLSHTAYREDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSK---------------- 389 (1119)
T ss_pred HhhcccccccccccccccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCcccccc----------------
Confidence 98887542210000 00000000000001111111 1 122235555554 7653210 000
Q ss_pred CCCCCCchhhhhhhhhhhHHhhhhhcC-CchH--HHHHHHHHHHHHHHHHHHHHhhcCCeeeE-eeeeeccccCCceEEE
Q 000890 1012 FDMPPKSEESMMLKDIEKDQQRKLRSH-PLFF--GITMGLLAEIINSRLFTTVRDSLGLTYDV-SFELNLFDRLKLGWYV 1087 (1237)
Q Consensus 1012 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~lL~~~l~srL~~~lRe~~GlaYsv-~~~~~~~~~~~~g~~~ 1087 (1237)
..+ ....+ ++++ .++..+|++..+|+|++.||+ .|++|++ ++.+.. ....+.|.
T Consensus 390 -----~~~--------------~~~~d~~~~~AL~VLs~lLggg~sS~L~q~LrE-~GLa~svv~~~~~~--~~~~~~f~ 447 (1119)
T PTZ00432 390 -----DYD--------------KSLIDPVDYLALLVLNYLLLGTPESVLYKALID-SGLGKKVVGSGLDD--YFKQSIFS 447 (1119)
T ss_pred -----ccc--------------cccCCHHHHHHHHHHHHHHcCCCccHHHHHHHh-cCCCcCCCcCcccC--CCCceEEE
Confidence 000 00011 1221 233446666668999999997 7999996 333332 23678888
Q ss_pred EEEe-cCc-------ccHHHHHHHHHHHHHhhhhCCCCHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHhcCCC
Q 000890 1088 ISVT-SPP-------GKVHKAVDACKNVLRGLHSNRIVQRELDRAKRTLLMRHEAEIK-----SNAYWLGLLAHLQASSV 1154 (1237)
Q Consensus 1088 i~~~-~~p-------~~~~~~~~~~~~~l~~l~~~~it~~ELe~aK~~l~~~~~~~~~-----s~~~~~~~l~~~~~~~l 1154 (1237)
|++. +.+ ++++++.+.+.++|+.++++||++++|++++.++.-++..... ...+....+..+...+-
T Consensus 448 I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~d 527 (1119)
T PTZ00432 448 IGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKD 527 (1119)
T ss_pred EEEEcCChHhccchhhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCC
Confidence 8874 442 3477999999999999999999999999999998777653211 22333333333332221
Q ss_pred CCCc---hhhHhhHHHHHhhcCHHHHHHHHHHhcCCCCceEEEE--eec
Q 000890 1155 PRKD---ISCIKDLMSLYEAASVEDIYLAYEQLRVDEDSLYSCI--GIA 1198 (1237)
Q Consensus 1155 ~~~~---~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~~~vv--G~~ 1198 (1237)
|... ...+.++...+ .-+..-+.+++++||.+++...+++ +++
T Consensus 528 p~~~l~~~~~l~~lr~~~-~~~~~y~e~Li~k~ll~N~h~~~v~~~p~~ 575 (1119)
T PTZ00432 528 PFEILRFEKLLNELKLRI-DNESKYLEKLIEKHLLNNNHRVTVHLEAVE 575 (1119)
T ss_pred HHHHHhhHHHHHHHHHHH-hcccHHHHHHHHHHccCCCeeeEEEEecCC
Confidence 2110 01122233333 2244578999999998776644443 444
No 18
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=3e-21 Score=231.37 Aligned_cols=412 Identities=16% Similarity=0.170 Sum_probs=298.4
Q ss_pred CCCCeEEEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCC-HHHHHHHHhccee
Q 000890 729 KESGITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFS-REQVELFCVNHLI 807 (1237)
Q Consensus 729 ~~~~i~~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s-~~el~~~~~~~~~ 807 (1237)
+...++..+|+||+++.+..++ ..+.....|.+++|+.++|.+..|+||+++||++.|+ ++|+ ...+..++..+|.
T Consensus 20 d~r~y~~I~LpNGl~~LlisDP-~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGs--eKYP~~~~f~~fLskhgG 96 (937)
T COG1025 20 DDRKYRAIKLPNGLRALLVSDP-QADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGS--EKYPDEGGFSEFLSKHGG 96 (937)
T ss_pred cCcceeEEECCCCceEEEecCC-CCCccceeEEeecCCCCChhhcccHHHHHHHHHHhcC--ccCCCccchHHHHHHcCC
Confidence 3456888899999999998865 5788899999999999999999999999999999987 8997 5668899999999
Q ss_pred eeeeecCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCC
Q 000890 808 NCSLESTEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDE 887 (1237)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 887 (1237)
+.++.|..+.|+ |.+.+.++.++.+|+-+.+.+.+|.|+++.++||+..+-+|+.....+-.+. ..++.....+..|
T Consensus 97 s~NA~T~~~~T~--fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R-~~~~~~~~~np~H 173 (937)
T COG1025 97 SHNASTAGERTA--FYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWR-MYQVQALTANPGH 173 (937)
T ss_pred ccccccCCCcee--EEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHH-HHHHHHhhcCCCC
Confidence 999989999998 6666777899999999999999999999999999999999999888776554 4555666677666
Q ss_pred C---CCCCCHhHHhh----cCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccC
Q 000890 888 R---FVEPTPKSLEN----LNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFR 960 (1237)
Q Consensus 888 ~---~~~~t~~~l~~----lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~ 960 (1237)
+ +..|..+.+.. -..++|++||+++|.++||+++|.|+-+.+++.+++.++||.+|......+ +.+.+.+
T Consensus 174 P~srFs~GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p--~~p~p~~- 250 (937)
T COG1025 174 PLSKFSTGNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIP--PIPVPVV- 250 (937)
T ss_pred CccccCCCChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCC--CCCCCCC-
Confidence 5 56677777766 457999999999999999999999999999999999999999997654311 1111111
Q ss_pred CCCCCCcceeEEecCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCc
Q 000890 961 PSPSDLHFQQVFLKDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPL 1040 (1237)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1237)
........+.+....+...+.+.|+.++... .-+..|+
T Consensus 251 --~d~~t~~ii~i~p~~~~~~L~i~f~i~~~~~----------------------------------------~~~~~~~ 288 (937)
T COG1025 251 --TDEQTGKIIHIVPAKPRPRLRIYFPIDDNSA----------------------------------------KFRSKPD 288 (937)
T ss_pred --ChHHhCceEEeccCCCCceEEEEEEcCCccc----------------------------------------ccccCCH
Confidence 1111223333334444566677777664210 0011111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEecC---cccHHHHHHHHHHHHHhhhhCCCC
Q 000890 1041 FFGITMGLLAEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTSP---PGKVHKAVDACKNVLRGLHSNRIV 1117 (1237)
Q Consensus 1041 ~~~~~~~lL~~~l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~~---p~~~~~~~~~~~~~l~~l~~~~it 1117 (1237)
.+...|++.--.+-|-.-|.+ +|++-++.+....+. .++|.|.|...-. -.+.++++..+.+.|+-++..++.
T Consensus 289 --~~~s~Lig~es~gsL~~~Lk~-~Glit~l~a~~~~~~-~n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~ 364 (937)
T COG1025 289 --EYLSHLIGNESPGSLLAWLKK-QGLITELSAGLDPIS-GNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIP 364 (937)
T ss_pred --HHHHHHhccCCCchHHHHHHh-ccchhhhcccccccc-CCcceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhccch
Confidence 233445553212233344555 899999998876654 5789888875432 258899999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-hhHHHHHHH-HHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCCceEEEE
Q 000890 1118 QRELDRAKRTLLMRHEAEIKS-NAYWLGLLA-HLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDEDSLYSCI 1195 (1237)
Q Consensus 1118 ~~ELe~aK~~l~~~~~~~~~s-~~~~~~~l~-~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~~~vv 1195 (1237)
...++....-.-..+.....+ +-+....+. .++.. | ++......-.+..-++++++.++..+. +++..+..+
T Consensus 365 ~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~~--p---~~~~~~~~~~~~~yd~~~~~~~l~~~~-pen~R~~li 438 (937)
T COG1025 365 KYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMERE--P---VEHTLYASLVLPRYDPKAIQERLALMT-PENARLWLI 438 (937)
T ss_pred hhHHHHHHHHHHhhhcccccCChHHHHHHHHHhcccC--C---hhhhhchhhcccccCHHHHHHHHHhhC-ccceEEEEe
Confidence 888888655433333222222 223333333 33322 2 244555566677788899999998775 666667777
Q ss_pred eecCCC
Q 000890 1196 GIAGAQ 1201 (1237)
Q Consensus 1196 G~~~~~ 1201 (1237)
+..+.-
T Consensus 439 s~~~~~ 444 (937)
T COG1025 439 SKLEEH 444 (937)
T ss_pred cCCCCc
Confidence 776544
No 19
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.90 E-value=4.4e-21 Score=206.64 Aligned_cols=376 Identities=14% Similarity=0.144 Sum_probs=255.4
Q ss_pred CcEEEEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChhh------HhhcCCeEEEEe
Q 000890 185 KLYRGQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK------LLGTGARSNAYT 258 (1237)
Q Consensus 185 ~~~~~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~~------l~~~G~~~na~t 258 (1237)
.....+|.|||+|...+++.+.. ++.|.|++||++|+.++.|++|+|....++.|++|+. ++.+|+.++.++
T Consensus 22 ~~~~~kl~ngL~Vas~e~~~~is--~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~ 99 (429)
T KOG2583|consen 22 ISKTTKLVNGLTVASREAPTAIS--SLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTA 99 (429)
T ss_pred hhhhhccccceEEEeccCCCcce--EEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeee
Confidence 45667999999999999987755 7999999999999999999999999999999999984 468899999999
Q ss_pred cCceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHH-HHHHHHHHhccChHHHHHHHHHHHhccCCCC
Q 000890 259 DFHHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKER-RAILSELQMMNTIEYRVDCQLLQHLHSENKL 337 (1237)
Q Consensus 259 ~~d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek-~~v~~e~~~~~~~~~~~~~~~~~~l~~~~~~ 337 (1237)
++|+..|.++++. ++++-.|.+|.|++..|.|.++|++.+. ..|..++. +.++...+.+++++..|.+ .+
T Consensus 100 tRe~~~~tvt~lr-------d~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~-~~t~~~~a~e~lH~aAfRn-gL 170 (429)
T KOG2583|consen 100 TRELIGLTVTFLR-------DDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLA-YQTPYTIAIEQLHAAAFRN-GL 170 (429)
T ss_pred ecceEEEEEEEec-------ccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhh-hcChHHHHHHHHHHHHHhc-cc
Confidence 9999999999998 7899999999999999999999999988 66666654 4566777899999999987 44
Q ss_pred CCCCCCCCHHHhcccCHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCcccccccc
Q 000890 338 SKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETASASTPTSSAFGAMAN 417 (1237)
Q Consensus 338 ~~~~~~G~~~~i~~it~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~p~~~~~~~~ 417 (1237)
+ .+..-.--.|.+++.++|++|-+++|...|++|+-+| +|+ +.+....++++ .++...+.. +.|..|
T Consensus 171 g-nslY~p~~~vg~vss~eL~~Fa~k~fv~gn~~lvg~n-vd~-~~L~~~~~~~~-~~~~~~~~k----~a~a~~----- 237 (429)
T KOG2583|consen 171 G-NSLYSPGYQVGSVSSSELKDFAAKHFVKGNAVLVGVN-VDH-DDLKQFADEYA-PIRDGLPLK----PAPAKY----- 237 (429)
T ss_pred C-CcccCCcccccCccHHHHHHHHHHHhhccceEEEecC-CCh-HHHHHHHHHhc-cccCCCCCC----CCCccc-----
Confidence 4 3333444578899999999999999999999999998 897 88888888873 222221111 111000
Q ss_pred ccccccccCCCCCCccccCCCcchhhHHhhhcccCCCCccccccc-CCCCCCCCCcccccHHHHHHHHHHHHH----HHH
Q 000890 418 FLVPKLSVGLPGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSL-SGSGADIPVNKVRTYGDLRNVLMKRIF----LSA 492 (1237)
Q Consensus 418 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~~~~~~~~~l~~~ll~~l~----~~~ 492 (1237)
.+ .+.++.......+ +.+.. +....+.+ .......+...|....- .+.
T Consensus 238 ----------~g-Ge~Rk~~~g~~~~--------------v~vagegAAa~~~k--~~~a~av~~~~Lg~~~~~k~~t~~ 290 (429)
T KOG2583|consen 238 ----------SG-GEARKDARGNRVH--------------VAVAGEGAAAGNLK--VLAAQAVLLAALGNSAPVKRGTGL 290 (429)
T ss_pred ----------cC-CccccccCCceeE--------------EEEecCcccccchH--HHHHHHHHHHHHhcccccccccch
Confidence 00 0011111111111 11111 11111111 11111111111111110 112
Q ss_pred HHHHHHHhhhcCCCCeeEeecccCccccccccEEEEEEEecCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 000890 493 LHFRINTRYKSSNPPFTSVEMDHSDSGREGCTVTTLTVTAEPKNWQSAVRVAVQEVRRLKEFGVTNGELTRYMDALLKDS 572 (1237)
Q Consensus 493 l~~rl~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~a~~~i~~el~~l~~~g~t~~EL~~ak~~l~~~~ 572 (1237)
+.. +-....+.......+...|+|.| .|.+++.....+..++++.....|+.....+++-.....+++.+....
T Consensus 291 ~~~-aa~~a~~~~~s~sA~~a~ysDsG-----L~gv~~~~~~~~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~ 364 (429)
T KOG2583|consen 291 LSE-AAGAAGEQGASASAFNAPYSDSG-----LFGVYVSAQGSQAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASY 364 (429)
T ss_pred HHH-HHhhccccCceeeeecccccCCc-----eEEEEEEecCccHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 211 11111122233455677888887 577888888888999999999999999999999888888887775432
Q ss_pred HHHHHhhccCCCchhhHHHHHhhcCCCcccChHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 000890 573 EHLAAMIDNISSVDNLDFIMESDALGHTVMDQRQGHASLVAVAGTITLEEVNSIGAEVLE 632 (1237)
Q Consensus 573 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~ 632 (1237)
. ....+.+ .+......+ .. ..+.+++.|++||..||++++++++.
T Consensus 365 ---~---ss~~a~~-----~~~~~~a~~-~~---~~d~~i~~id~Vt~sdV~~a~kk~~s 409 (429)
T KOG2583|consen 365 ---L---SSVEALE-----LATGSQANL-VS---EPDAFIQQIDKVTASDVQKAAKKFLS 409 (429)
T ss_pred ---h---cchHHHH-----HhhHHHhcC-CC---ChHHHHHHhccccHHHHHHHHHHhcc
Confidence 1 1111110 110000101 11 34578999999999999999999874
No 20
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=3.4e-19 Score=218.32 Aligned_cols=406 Identities=14% Similarity=0.133 Sum_probs=290.5
Q ss_pred CCCeEEEEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCC-HHHHHHHHhcceee
Q 000890 730 ESGITQLRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFS-REQVELFCVNHLIN 808 (1237)
Q Consensus 730 ~~~i~~~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s-~~el~~~~~~~~~~ 808 (1237)
.......+|.||+++++..++ ..+.....+-+++|+..+|.+..|+||+++||+|.|+ .+|+ .+++..++..+|.+
T Consensus 25 ~r~yr~~~L~Ngl~alLisDp-~tD~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS--~KYP~En~y~~~lsk~gGs 101 (974)
T KOG0959|consen 25 TREYRGIELTNGLRALLISDP-KTDKSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGS--EKYPDENEYSKFLSKNGGS 101 (974)
T ss_pred ccceeEEEecCCceEEEecCC-CCCccceeeeeeccccCCccccccHHHHHHHHHhhcc--ccCCCcchhHHHHHhcCCc
Confidence 345778899999999998874 4677889999999999999999999999999999986 8887 56678888888888
Q ss_pred eeeecCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCC
Q 000890 809 CSLESTEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDER 888 (1237)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 888 (1237)
.++.|..+.|+ |++.+..+.++.+|+.+++.+.+|.|.+++.+|++..+.+|.+....+-.+ ...++...+..++++
T Consensus 102 sNA~T~~e~T~--y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~w-r~~ql~~~l~~~~hp 178 (974)
T KOG0959|consen 102 SNAYTDSEHTN--YYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGW-RFDQLLRSLSNPGHP 178 (974)
T ss_pred cccccccccce--EEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchh-HHHHHHHHhcCCCCc
Confidence 88889999998 555557788999999999999999999999999999999999987776644 456667777777765
Q ss_pred ---CCCCCHhHHhhcC-----HHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccC
Q 000890 889 ---FVEPTPKSLENLN-----LKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFR 960 (1237)
Q Consensus 889 ---~~~~t~~~l~~lt-----~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~ 960 (1237)
+..|..+.|.... .+.|.+||++||.+++|+++|+|+.+.+.+..++.+.|+.++....+. +.+...++.
T Consensus 179 ~~kF~tGN~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~--p~f~~~p~~ 256 (974)
T KOG0959|consen 179 YSKFSTGNKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPR--PVFPEPPFL 256 (974)
T ss_pred chhccccchhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCC--CcccCCCCC
Confidence 5678888888887 899999999999999999999999999999999999999998765431 122222111
Q ss_pred CCCCCCcceeEEecCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCc
Q 000890 961 PSPSDLHFQQVFLKDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPL 1040 (1237)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1237)
+ ..-.+.+.+....+...+.+.|+.|+..+. | ...|.
T Consensus 257 --~-e~~~~~~~v~pik~~~~l~is~~~p~~~~~------------------------------------y----~~kP~ 293 (974)
T KOG0959|consen 257 --P-EELKKLVRVVPIKDGRSLMISWPVPPLNHH------------------------------------Y----KSKPL 293 (974)
T ss_pred --h-HHhCcEEEEEeccccceEEEEEecCCcccc------------------------------------c----ccCcH
Confidence 1 112234444455556677788888753210 0 11222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEecCc---ccHHHHHHHHHHHHHhhhhCCCC
Q 000890 1041 FFGITMGLLAEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTSPP---GKVHKAVDACKNVLRGLHSNRIV 1117 (1237)
Q Consensus 1041 ~~~~~~~lL~~~l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~~p---~~~~~~~~~~~~~l~~l~~~~it 1117 (1237)
. ....++|.--.+-|...||. +|++-+..+....+ ..+.+.|.+.+.-.- +++++++..+.+-|.-+.+.+.-
T Consensus 294 ~--y~~hLigheg~GSL~~~Lk~-~gw~~sl~a~~~~~-as~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~ 369 (974)
T KOG0959|consen 294 R--YLSHLIGHEGPGSLLSYLKR-LGWATSLEAGIPEF-ASGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPE 369 (974)
T ss_pred H--HHHHHhccCCcchHHHHHHH-hhchheeecCCCcc-ccccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCch
Confidence 1 23335544333455567776 89998888765522 245677777654432 57789999999988888776665
Q ss_pred HHHHHHHHHHHHHHHHHHh---hhhhHHHHHH-HHHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCCceEE
Q 000890 1118 QRELDRAKRTLLMRHEAEI---KSNAYWLGLL-AHLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDEDSLYS 1193 (1237)
Q Consensus 1118 ~~ELe~aK~~l~~~~~~~~---~s~~~~~~~l-~~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~~~ 1193 (1237)
..-++.... +......+ +.+...+..+ .+++ -+|. +.+......+....++.|+.+...+ .+.+..++
T Consensus 370 ~~i~~E~~~--~~~~~Frf~~k~~p~~~~~~~~~nlq--~~P~---~~il~~~~ll~~~~p~~i~~~~~~L-~p~n~~v~ 441 (974)
T KOG0959|consen 370 KWIFKELQL--ISEVKFRFQDKEPPMEYASEIASNLQ--YYPV---EDVLTGSYLLTEFDPDLIQEVLSSL-VPSNMRVI 441 (974)
T ss_pred hHHHHHHHH--hhhhheeecccCCcHHHHHHHHhhcc--cCCh---HHhhcchhhhhhcChHHHHHHHHhc-Ccccceee
Confidence 444444322 22222111 2333333333 3444 3343 5555667788889999999998766 56666666
Q ss_pred EEeec
Q 000890 1194 CIGIA 1198 (1237)
Q Consensus 1194 vvG~~ 1198 (1237)
+++..
T Consensus 442 ~~s~~ 446 (974)
T KOG0959|consen 442 LVSRS 446 (974)
T ss_pred eeeec
Confidence 66554
No 21
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.83 E-value=3e-17 Score=177.29 Aligned_cols=387 Identities=12% Similarity=0.096 Sum_probs=261.8
Q ss_pred EEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcceeeeeeecCc
Q 000890 736 LRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHLINCSLESTE 815 (1237)
Q Consensus 736 ~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~~~~~~~~~~ 815 (1237)
.+|.||++|....++ .++..+.+.|++|+++|+.++.|+.|++....++.+ ++++...|.+..+..|.+++...++
T Consensus 26 ~kl~ngL~Vas~e~~--~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~T--q~~sal~ivr~se~~GG~Lss~~tR 101 (429)
T KOG2583|consen 26 TKLVNGLTVASREAP--TAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDT--QERSALKIVRESEQLGGTLSSTATR 101 (429)
T ss_pred hccccceEEEeccCC--CcceEEEEEEecCccCCccccccHHHHHHHhcccCc--cccchhhhhhhhHhhCceeeeeeec
Confidence 478999999988765 688899999999999999999999999998888875 9999999999999999999988888
Q ss_pred ceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHcCcCChHHHHHHHHHHHHhcCCCCC-CCCC
Q 000890 816 EFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRAR-QLYLSYYRSIPKSLERSTAHKLMLAMLNGDERF-VEPT 893 (1237)
Q Consensus 816 ~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~t 893 (1237)
|.+. +..+++.++++..|.+|.+++..|.|.++|++... ..+..++. ..+|......++..+.|.+.--. .+..
T Consensus 102 e~~~--~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~--~~t~~~~a~e~lH~aAfRngLgnslY~p 177 (429)
T KOG2583|consen 102 ELIG--LTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLA--YQTPYTIAIEQLHAAAFRNGLGNSLYSP 177 (429)
T ss_pred ceEE--EEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhh--hcChHHHHHHHHHHHHHhcccCCcccCC
Confidence 8877 66778889999999999999999999999999888 44544443 35676666777777777553221 2223
Q ss_pred HhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCCCCCCCcceeEEe
Q 000890 894 PKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFRPSPSDLHFQQVFL 973 (1237)
Q Consensus 894 ~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1237)
.-.+.+++.++|.+|..++|..+|++++-+| +|++.++...++++ .++.+... + +.+....++....
T Consensus 178 ~~~vg~vss~eL~~Fa~k~fv~gn~~lvg~n-vd~~~L~~~~~~~~-~~~~~~~~----k-------~a~a~~~gGe~Rk 244 (429)
T KOG2583|consen 178 GYQVGSVSSSELKDFAAKHFVKGNAVLVGVN-VDHDDLKQFADEYA-PIRDGLPL----K-------PAPAKYSGGEARK 244 (429)
T ss_pred cccccCccHHHHHHHHHHHhhccceEEEecC-CChHHHHHHHHHhc-cccCCCCC----C-------CCCccccCCcccc
Confidence 3468899999999999999999999999886 88899999998882 22222111 0 0011111223332
Q ss_pred cCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCc--hHHHHHHHHHH
Q 000890 974 KDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPL--FFGITMGLLAE 1051 (1237)
Q Consensus 974 ~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lL~~ 1051 (1237)
.......++.+++.+-.. . +++. .+.+...+|+.
T Consensus 245 ~~~g~~~~v~vagegAAa--------------------------~------------------~~k~~~a~av~~~~Lg~ 280 (429)
T KOG2583|consen 245 DARGNRVHVAVAGEGAAA--------------------------G------------------NLKVLAAQAVLLAALGN 280 (429)
T ss_pred ccCCceeEEEEecCcccc--------------------------c------------------chHHHHHHHHHHHHHhc
Confidence 233345556555543211 0 0110 11122334433
Q ss_pred HH-----HHHHHHHHHhhcCCeeeEe--eeeeccccCCceEEEEEEecCcccHHHHHHHHHHHHHhhhhCCCCHHHHHHH
Q 000890 1052 II-----NSRLFTTVRDSLGLTYDVS--FELNLFDRLKLGWYVISVTSPPGKVHKAVDACKNVLRGLHSNRIVQRELDRA 1124 (1237)
Q Consensus 1052 ~l-----~srL~~~lRe~~GlaYsv~--~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~it~~ELe~a 1124 (1237)
.. .+-| .++-. .-+-|+++ +....| .+.|+|++++..+-.++.+++...-+.+......+++-.....+
T Consensus 281 ~~~~k~~t~~~-~~aa~-~a~~~~~s~sA~~a~y--sDsGL~gv~~~~~~~~a~~~v~s~v~~lks~~~~~id~~~~~a~ 356 (429)
T KOG2583|consen 281 SAPVKRGTGLL-SEAAG-AAGEQGASASAFNAPY--SDSGLFGVYVSAQGSQAGKVVSSEVKKLKSALVSDIDNAKVKAA 356 (429)
T ss_pred ccccccccchH-HHHHh-hccccCceeeeecccc--cCCceEEEEEEecCccHHHHHHHHHHHHHHHHhcCCcchHHHHH
Confidence 22 2222 22222 12223333 333343 38999999987776688888888888787777767777666666
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCCceEEEEeecCCC
Q 000890 1125 KRTLLMRHEAEIKSNAYWLGLLAHLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDEDSLYSCIGIAGAQ 1201 (1237)
Q Consensus 1125 K~~l~~~~~~~~~s~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~~~vvG~~~~~ 1201 (1237)
++.+........+. +. +.......++. ...++++.|++||..||.+++++++. .+..++.+|+.+.+
T Consensus 357 ~~~l~~~~~ss~~a---~~--~~~~~~a~~~~----~~d~~i~~id~Vt~sdV~~a~kk~~s-~kls~aA~Gnl~~v 423 (429)
T KOG2583|consen 357 IKALKASYLSSVEA---LE--LATGSQANLVS----EPDAFIQQIDKVTASDVQKAAKKFLS-GKLSLAAYGNLSNV 423 (429)
T ss_pred HHHHHHHhhcchHH---HH--HhhHHHhcCCC----ChHHHHHHhccccHHHHHHHHHHhcc-CcceeeeeccccCC
Confidence 66555544332222 11 11111122221 23588999999999999999999964 44568889986543
No 22
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.81 E-value=3.3e-19 Score=180.79 Aligned_cols=141 Identities=25% Similarity=0.325 Sum_probs=126.7
Q ss_pred EEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChhh------HhhcCCeEEEEecCceEEEEEEe
Q 000890 196 RYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREK------LLGTGARSNAYTDFHHTVFHIHS 269 (1237)
Q Consensus 196 ~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~~------l~~~G~~~na~t~~d~t~~~~~~ 269 (1237)
+|++.+++..+. +.+.|+|++|+++|++++.|+|||++||+|+||++++. ++.+|+.+|++|+.|+|.|.+++
T Consensus 1 ~V~~~~~~~~~~-~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~~~ 79 (149)
T PF00675_consen 1 KVVLVEDPGSPV-VSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASFNASTSRDSTSYSASV 79 (149)
T ss_dssp EEEEEESTTSSE-EEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEEEE
T ss_pred CEEEEEcCCCCE-EEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhccccceEecccceEEEEEE
Confidence 688889877777 59999999999999999999999999999999999863 67899999999999999999999
Q ss_pred CCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhccChH-HHHHHHHHHHhccCCCCCCCCCCCC
Q 000890 270 PTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIE-YRVDCQLLQHLHSENKLSKRFPIGL 345 (1237)
Q Consensus 270 ~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~G~ 345 (1237)
++ ++++.+|+++++++.+|.|++++|+++|.+++.|++.....+ ..+.+.+...+|.+++|+ ++..|+
T Consensus 80 ~~-------~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~-~~~~~~ 148 (149)
T PF00675_consen 80 LS-------EDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYG-NPLLGP 148 (149)
T ss_dssp EG-------GGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGG-SHSS-T
T ss_pred ec-------ccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCC-CCCCCC
Confidence 98 789999999999999999999999999999999999987654 668888899999998887 567776
No 23
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.73 E-value=2.9e-17 Score=172.98 Aligned_cols=181 Identities=27% Similarity=0.439 Sum_probs=132.1
Q ss_pred hcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCCCCCCCcceeEEecCCc-
Q 000890 899 NLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFRPSPSDLHFQQVFLKDTD- 977 (1237)
Q Consensus 899 ~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 977 (1237)
++|.++|++||++||.|+||+++|+||++.++++++++++|+.|+....... .. +..............++....+
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~ 77 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPK-PK--PRSPPLPPSEPQGKEIVIPSKDE 77 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGS-SS--CSSSSSSCGGSSEEEEEEEESSS
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhcccccccc-cc--ccccccccccccccccccccccc
Confidence 4789999999999999999999999999999999999999999986531000 00 0000111111222333444333
Q ss_pred cceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCCchH--HHHHHHHHHHHHH
Q 000890 978 ERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHPLFF--GITMGLLAEIINS 1055 (1237)
Q Consensus 978 ~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lL~~~l~s 1055 (1237)
.+..+.++++++..+ .+++.. .++..+|++.+++
T Consensus 78 ~~~~v~~~~~~~~~~--------------------------------------------~~~~~~~~~~l~~~l~~~~~s 113 (184)
T PF05193_consen 78 SQSIVSIAFPGPPIK--------------------------------------------DSKDYFALNLLSSLLGNGMSS 113 (184)
T ss_dssp SSEEEEEEEEEEETG--------------------------------------------TSTTHHHHHHHHHHHHCSTTS
T ss_pred ccccccccccccccc--------------------------------------------ccchhhHHHHHHHHHhcCccc
Confidence 678888888775421 112211 2333455555567
Q ss_pred HHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEecCcccHHHHHHHHHHHHHhhhhCCCCHHHHHHHHHHH
Q 000890 1056 RLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTSPPGKVHKAVDACKNVLRGLHSNRIVQRELDRAKRTL 1128 (1237)
Q Consensus 1056 rL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~it~~ELe~aK~~l 1128 (1237)
+|+..||++.|++|+++++...+. +.|.|.+++.++|++++++++.+.++++.+.+.|++++||+++|+++
T Consensus 114 ~l~~~lr~~~~l~y~v~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 114 RLFQELREKQGLAYSVSASNSSYR--DSGLFSISFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHTTTTSESEEEEEEEEES--SEEEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred hhHHHHHhccccceEEEeeeeccc--cceEEEEEEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 899999999999999999866543 78999999999999999999999999999999899999999999875
No 24
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.72 E-value=1.6e-15 Score=183.37 Aligned_cols=398 Identities=13% Similarity=0.127 Sum_probs=265.4
Q ss_pred cCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcceee--eeeecCcc
Q 000890 739 SNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHLIN--CSLESTEE 816 (1237)
Q Consensus 739 ~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~~~--~~~~~~~~ 816 (1237)
.+|++++...+++ +...+.+.|++ ++.+..|++|.++|+.+.|+ .+|+-.+.-..+....++ +++.|..|
T Consensus 28 ~TGa~l~hi~~~d--~~~vFsi~F~T----~p~dstGVaHiLEHtvlcGS--~kYPvkdPF~~ml~rSLntF~NA~T~~D 99 (978)
T COG1026 28 KTGAELAHIKNED--PNNVFSIAFKT----EPHDSTGVAHILEHTVLCGS--KKYPVKDPFFKMLKRSLNTFLNAFTFPD 99 (978)
T ss_pred cCCceEEEecCCC--cCceEEEEeec----CCCCCCCcchHHHHHhhhCC--CCCCCCChHHHHHHHhHHHHHhhccCCC
Confidence 4899998877653 44456666665 45678999999999999997 899877655555544443 46668889
Q ss_pred eEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHH--------------HHHHHHHHHcCcCChHHHHHHHHHHHH
Q 000890 817 FIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRA--------------RQLYLSYYRSIPKSLERSTAHKLMLAM 882 (1237)
Q Consensus 817 ~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~--------------k~~~~~~~~~~~~~~~~~~a~~~~~~~ 882 (1237)
.|++.++.. -.+++-++|.+..|.+.+|...++.|..+ +.++..|++....++...+...+-.++
T Consensus 100 ~T~YP~sS~-~~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~sl 178 (978)
T COG1026 100 KTVYPASSA-NEKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRAMQQSL 178 (978)
T ss_pred cceeecccc-CcchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHHHHHhh
Confidence 998666543 34589999999999999999888877653 356678888888888666666665666
Q ss_pred hcCCCCC--CCCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHh-hcccCCCCCCCCcCccCC-cc
Q 000890 883 LNGDERF--VEPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDY-LGTVRATNDSKREHEYSP-IL 958 (1237)
Q Consensus 883 ~~~~~~~--~~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~-~g~l~~~~~~~~~~~~~~-~~ 958 (1237)
+.+...+ .-|.+..|..||.|++++||+++|.|+|+.++++||++.++....+++. |......... .+.+. ..
T Consensus 179 fp~~ty~~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~~---~~i~~~~~ 255 (978)
T COG1026 179 FPGTTYGVNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRELD---VPIPDQKA 255 (978)
T ss_pred CCCccccccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhccccccccC---CCCCcccc
Confidence 6555432 3478999999999999999999999999999999999999999999887 5555433211 01000 01
Q ss_pred cCCCCCCCcceeEEe---cCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhh
Q 000890 959 FRPSPSDLHFQQVFL---KDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKL 1035 (1237)
Q Consensus 959 ~~~~~~~~~~~~~~~---~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1237)
|..+ ........+ ..+..+..+.+.|.++... ++
T Consensus 256 ~~~~--~~~~~~ypi~~~~~de~q~~~~lsWl~~~~~--------------------------d~--------------- 292 (978)
T COG1026 256 FKKP--RRKVLEYPISFDEEDEDQGLLSLSWLGGSAS--------------------------DA--------------- 292 (978)
T ss_pred cCcc--cccceeeccCCCCCCCceeEEEEEEecCCcc--------------------------cH---------------
Confidence 1110 000011111 1233467777888776421 10
Q ss_pred hcCCchHHHHHHHHHHHH----HHHHHHHHHhhcCCe-eeEeeeeeccccCCceEEEEEE-ecCcccHHHHHHHHHHHHH
Q 000890 1036 RSHPLFFGITMGLLAEII----NSRLFTTVRDSLGLT-YDVSFELNLFDRLKLGWYVISV-TSPPGKVHKAVDACKNVLR 1109 (1237)
Q Consensus 1036 ~~~~~~~~~~~~lL~~~l----~srL~~~lRe~~Gla-Ysv~~~~~~~~~~~~g~~~i~~-~~~p~~~~~~~~~~~~~l~ 1109 (1237)
+-.+++.+|..++ .+.|.+.|-| -|+. +.++..+... .....|.+.+ .+..++.+++.+.+.++|+
T Consensus 293 -----~~~lal~vL~~iLl~~~asPl~~~lie-sglg~~~~~g~~~~~--~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~ 364 (978)
T COG1026 293 -----EDSLALEVLEEILLDSAASPLTQALIE-SGLGFADVSGSYDSD--LKETIFSVGLKGVSEEKIAKLKNLVLSTLK 364 (978)
T ss_pred -----HHHHHHHHHHHHHccCcccHHHHHHHH-cCCCcccccceeccc--cceeEEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 1135566777766 5889999998 5666 4444323321 1345555554 6677899999999999999
Q ss_pred hhhhCCCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCchhhH---hhHHHHHhh-cCHHH-HHHHHHHh
Q 000890 1110 GLHSNRIVQRELDRAKRTLLMRHEAEIKSNAYWLGLLAHLQASSVPRKDISCI---KDLMSLYEA-ASVED-IYLAYEQL 1184 (1237)
Q Consensus 1110 ~l~~~~it~~ELe~aK~~l~~~~~~~~~s~~~~~~~l~~~~~~~l~~~~~~~~---~~~~~~l~~-vT~ed-v~~~a~~~ 1184 (1237)
++..++|..+.++.++.++.-++... .+.-+-+.++......++..+++... ..+.+.|+. +...+ +.++.++|
T Consensus 365 ~l~~~gi~~~~ie~~~~q~E~s~ke~-~s~pfgl~l~~~~~~gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky 443 (978)
T COG1026 365 ELVKNGIDKKLIEAILHQLEFSLKEV-KSYPFGLGLMFRSLYGWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKY 443 (978)
T ss_pred HHHHhcCCHHHHHHHHHHHHHhhhhh-cCCCccHHHHHHhccccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHH
Confidence 99999999999999999988777654 33333334444434444444444322 233333333 33333 89999999
Q ss_pred cCCCCceEEEEeecCC
Q 000890 1185 RVDEDSLYSCIGIAGA 1200 (1237)
Q Consensus 1185 l~~~~~~~~vvG~~~~ 1200 (1237)
+.+.+..++++-.+..
T Consensus 444 ~l~N~h~~~v~~~Ps~ 459 (978)
T COG1026 444 FLDNPHYVTVIVLPSP 459 (978)
T ss_pred hhcCCccEEEEEecCh
Confidence 9987755455544433
No 25
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.64 E-value=4.8e-16 Score=163.62 Aligned_cols=181 Identities=20% Similarity=0.302 Sum_probs=128.2
Q ss_pred ccCHHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCC---CCCCCCCCCccccccccccccccccCC
Q 000890 351 KWDADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENE---TASASTPTSSAFGAMANFLVPKLSVGL 427 (1237)
Q Consensus 351 ~it~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~---~~~~~~~~p~~~~~~~~~~~p~~~~~~ 427 (1237)
++|.++|++||++||+|+||+|+++||+++ +++.+.|+++|+.|+.... ..+. ..+ .....
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~-~~~~~~i~~~~~~l~~~~~~~~~~~~--~~~-------------~~~~~ 64 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDP-DELEKLIEKYFGSLPKSSIPPKPKPR--SPP-------------LPPSE 64 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGH-HHHHHHHHHHHTTSSHSCHGGSSSCS--SSS-------------SSCGG
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccH-HHHHHHHHhhhhhhcccccccccccc--ccc-------------ccccc
Confidence 589999999999999999999999999996 9999999999999986531 1111 000 00000
Q ss_pred CCCCccccCCCcchhhHHhhhcccCCCCcccccccCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 000890 428 PGSLSHERSSNSDQSKLIRRERHAVRPPVEHNWSLSGSGADIPVNKVRTYGDLRNVLMKRIFLSALHFRINTRYKSSNPP 507 (1237)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ll~~l~~~~l~~rl~~~l~~~~~~ 507 (1237)
.....+........++.+.+.|..+.... ........++..++.+.+.++|...+|+..++
T Consensus 65 -----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l 125 (184)
T PF05193_consen 65 -----------PQGKEIVIPSKDESQSIVSIAFPGPPIKD--------SKDYFALNLLSSLLGNGMSSRLFQELREKQGL 125 (184)
T ss_dssp -----------SSEEEEEEEESSSSSEEEEEEEEEEETGT--------STTHHHHHHHHHHHHCSTTSHHHHHHHTTTTS
T ss_pred -----------ccccccccccccccccccccccccccccc--------cchhhHHHHHHHHHhcCccchhHHHHHhcccc
Confidence 00000111111113455777887766511 11234455667777777777788888988888
Q ss_pred eeEeecccCccccccccEEEEEEEecCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 000890 508 FTSVEMDHSDSGREGCTVTTLTVTAEPKNWQSAVRVAVQEVRRLKEFGVTNGELTRYMDAL 568 (1237)
Q Consensus 508 ~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~a~~~i~~el~~l~~~g~t~~EL~~ak~~l 568 (1237)
+|++++++.... ..+.+.+++.+.+++++++++.+.++|+++.++||+++||+++|++|
T Consensus 126 ~y~v~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 126 AYSVSASNSSYR--DSGLFSISFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp ESEEEEEEEEES--SEEEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred ceEEEeeeeccc--cceEEEEEEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 999988854332 34579999999999999999999999999999999999999999875
No 26
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=2.8e-13 Score=154.13 Aligned_cols=405 Identities=12% Similarity=0.084 Sum_probs=255.7
Q ss_pred CCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcce-eeeeeecCcceE
Q 000890 740 NGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHL-INCSLESTEEFI 818 (1237)
Q Consensus 740 NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~-~~~~~~~~~~~~ 818 (1237)
-|++|....++ ...++-.+.+.. |-....|.-|-++|+.|+|+ ++|+...+-...++.. .+.++.|+.|++
T Consensus 28 Tkl~va~~~~p--ts~vhG~f~v~T----Ea~~d~G~PHTLEHL~FMGS--KkYP~kGvLd~~anr~l~dtNAwTDtD~T 99 (1022)
T KOG0961|consen 28 TKLRVAIGEVP--TSMVHGAFSVVT----EADSDDGLPHTLEHLVFMGS--KKYPFKGVLDVIANRCLADTNAWTDTDHT 99 (1022)
T ss_pred cceEEEEeecC--CcceeeeEEeee----eecCCCCCchhHHHHhhhcc--ccCCcccHHHHhhcchhcccccccccCcc
Confidence 47888877655 335554444443 23346799999999999997 9999887766555443 245666888888
Q ss_pred EEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHH----------HHHHHHHHcCcCChHHHHHHHHHHHHhcCCCC
Q 000890 819 AMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRAR----------QLYLSYYRSIPKSLERSTAHKLMLAMLNGDER 888 (1237)
Q Consensus 819 ~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k----------~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 888 (1237)
.++++ ++..+.+-++|..+.+-+.+|..++++|..+. .++.++++..+......+....-..+|+..+.
T Consensus 100 ~YtLS-tag~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sg 178 (1022)
T KOG0961|consen 100 AYTLS-TAGSDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSG 178 (1022)
T ss_pred eEEee-cccccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCC
Confidence 87776 35556899999999999999999999887754 56677887765554333333333445555554
Q ss_pred C---CCCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccCCcccCC----
Q 000890 889 F---VEPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYSPILFRP---- 961 (1237)
Q Consensus 889 ~---~~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~~~~~~~---- 961 (1237)
| .-|-.+.++.+|.+.+++||+++|.++||.++|+|.++++++..+....-..++..... .+..++.+ |-.
T Consensus 179 Y~~eTGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~-vP~~~~rP-f~~tn~~ 256 (1022)
T KOG0961|consen 179 YAVETGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMST-VPDHFPRP-FSFTNAL 256 (1022)
T ss_pred ceeccCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhcccc-CCCCCCCC-cccccCc
Confidence 4 34678999999999999999999999999999999999999999887665544332111 11111111 110
Q ss_pred --CCCCCcceeEEecCCccceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhhhHHhhhhhcCC
Q 000890 962 --SPSDLHFQQVFLKDTDERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIEKDQQRKLRSHP 1039 (1237)
Q Consensus 962 --~~~~~~~~~~~~~~~~~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1237)
.+........+-.++..+..+.++|.++... + .++|-
T Consensus 257 ~~i~e~t~~tVefp~~Des~G~v~~aW~g~s~s--------------------------D---------------~~t~~ 295 (1022)
T KOG0961|consen 257 SDIKESTVHTVEFPTDDESRGAVEVAWFGHSPS--------------------------D---------------LETHS 295 (1022)
T ss_pred ccCCccceeeeecCCcccccceEEEEEcCCCHH--------------------------H---------------hhhHH
Confidence 0111111222223455688889999876421 1 01110
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHh-hcCCeeeEeeeeeccccCCceEEEEEE-ecCcccHHHHHHHHHHHHHhhhhCCCC
Q 000890 1040 LFFGITMGLLAEIINSRLFTTVRD-SLGLTYDVSFELNLFDRLKLGWYVISV-TSPPGKVHKAVDACKNVLRGLHSNRIV 1117 (1237)
Q Consensus 1040 ~~~~~~~~lL~~~l~srL~~~lRe-~~GlaYsv~~~~~~~~~~~~g~~~i~~-~~~p~~~~~~~~~~~~~l~~l~~~~it 1117 (1237)
...++.+.|....-+.+.+.+-| +..++-++++.....- . -.+.+.+ ++.-+++++....+++.+.+ ...|+
T Consensus 296 -a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~~~v--r-c~i~L~f~gVP~EKi~~~~~k~l~~l~e--t~~iD 369 (1022)
T KOG0961|consen 296 -ALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIAEGV--R-CDIRLNFAGVPVEKIDECAPKFLDKLVE--TANID 369 (1022)
T ss_pred -HHHHHHHHhccccccccccceEEecCccccceeeeeeccc--c-eeEEEeecCCcHHHhhhhhHHHHHHHHH--hcccC
Confidence 11223334443333566666655 3457777776654321 1 2233444 44557887777777666654 34577
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHhcCCCCCCch--h--hHhhHHHHHhhcCHHHHHHHHHHhcCCCCce
Q 000890 1118 QRELDRAKRTLLMRHEAEIKSN--AYWLGLLAHLQASSVPRKDI--S--CIKDLMSLYEAASVEDIYLAYEQLRVDEDSL 1191 (1237)
Q Consensus 1118 ~~ELe~aK~~l~~~~~~~~~s~--~~~~~~l~~~~~~~l~~~~~--~--~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~ 1191 (1237)
-+.+.....+.+-++...++.+ +.++..+..-+.||-..+.. . ...++.+.+++....|..++.++||.+.++
T Consensus 370 m~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fven~s- 448 (1022)
T KOG0961|consen 370 MERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQLYGNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFVENPS- 448 (1022)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhhccCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhccCCC-
Confidence 7777666666666666666654 44555555445555443321 1 123556788999999999999999986655
Q ss_pred EEEEeecCCCCC
Q 000890 1192 YSCIGIAGAQAG 1203 (1237)
Q Consensus 1192 ~~vvG~~~~~~~ 1203 (1237)
++|++.+.....
T Consensus 449 ~tVia~Ps~em~ 460 (1022)
T KOG0961|consen 449 ATVIAVPSEEMV 460 (1022)
T ss_pred eEEEecCcHHHH
Confidence 678888765443
No 27
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.47 E-value=8.6e-13 Score=133.75 Aligned_cols=139 Identities=15% Similarity=0.187 Sum_probs=121.0
Q ss_pred EEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcceeeeeeecCcceEEEEE
Q 000890 743 PINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHLINCSLESTEEFIAMEF 822 (1237)
Q Consensus 743 ~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~~~~~~~~~~~~~~~~~ 822 (1237)
||++..+ +..+.+.+.++|++|+..|+....|++|+++|++++|+ .+++..++.+.++..|.+++..++.+.+. |
T Consensus 1 ~V~~~~~-~~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs--~~~~~~~l~~~l~~~G~~~~~~t~~d~t~--~ 75 (149)
T PF00675_consen 1 KVVLVED-PGSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGS--KKYSSDELQEELESLGASFNASTSRDSTS--Y 75 (149)
T ss_dssp EEEEEES-TTSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBB--SSSBHHHHHHHHHHTTCEEEEEEESSEEE--E
T ss_pred CEEEEEc-CCCCEEEEEEEEeeccCCCCCCCCchhhhhhhhccccc--chhhhhhhHHHhhhhccccceEecccceE--E
Confidence 5777776 35899999999999999999999999999999999996 89999999999999999999999999988 6
Q ss_pred EEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCC
Q 000890 823 RFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGD 886 (1237)
Q Consensus 823 ~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 886 (1237)
.++++.++++.+|++|.+++.+|.|++++|+++|..++.+++....+|.......+...+|.+.
T Consensus 76 ~~~~~~~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~ 139 (149)
T PF00675_consen 76 SASVLSEDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGH 139 (149)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTS
T ss_pred EEEEecccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccC
Confidence 6677788999999999999999999999999999999999999888885555555555555443
No 28
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=5.6e-11 Score=136.07 Aligned_cols=391 Identities=10% Similarity=0.103 Sum_probs=241.9
Q ss_pred cCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHH-HHHHHhccee-eeeeecCcc
Q 000890 739 SNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQ-VELFCVNHLI-NCSLESTEE 816 (1237)
Q Consensus 739 ~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~e-l~~~~~~~~~-~~~~~~~~~ 816 (1237)
.-|..++...++.+++. +.+.|+.. |.+..|+-|+++|...-|+ .+|+-.+ +-+++.+... -+++.|..|
T Consensus 60 ~Tgae~lhl~reD~N~v--FsI~FrTp----p~dstGiPHILEHtvLCGS--~KYPvrdPFfkmLnrSLatFmNAfT~pD 131 (998)
T KOG2019|consen 60 KTGAEVLHLDREDENNV--FSIVFRTP----PKDSTGIPHILEHTVLCGS--RKYPVRDPFFKMLNRSLATFMNAFTAPD 131 (998)
T ss_pred CCCceeEeeccCCCCce--eEEEeecC----CCccCCCchhhhhheeecc--CcCcccChHHHHHHHHHHHHHhhccCCC
Confidence 35778877666554544 56666654 4567899999999998886 7777433 4444332222 235567888
Q ss_pred eEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHH------------------HHHHHHHHHHcCcCChHHHHHHHH
Q 000890 817 FIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDR------------------ARQLYLSYYRSIPKSLERSTAHKL 878 (1237)
Q Consensus 817 ~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~------------------~k~~~~~~~~~~~~~~~~~~a~~~ 878 (1237)
++++-|..+. .+++.++.++.-+....|...+.+|.. .|.++..|++....++...+...+
T Consensus 132 ~T~yPfattN-~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~ 210 (998)
T KOG2019|consen 132 YTFYPFATTN-TKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLF 210 (998)
T ss_pred cceeecccCC-hHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHH
Confidence 8886666444 347888888877777777665555543 345566778777777765555444
Q ss_pred HHHHhcCCCCC---CCCCHhHHhhcCHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCCCCCCcCccC
Q 000890 879 MLAMLNGDERF---VEPTPKSLENLNLKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATNDSKREHEYS 955 (1237)
Q Consensus 879 ~~~~~~~~~~~---~~~t~~~l~~lt~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~~~~~~~~~~ 955 (1237)
-.+++ .++.| .-|++-.|..++.+++++||+++|.|+|+.+.-.||+..++..++++..|............ ..
T Consensus 211 Qq~L~-p~~tYgv~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv--~~ 287 (998)
T KOG2019|consen 211 QQALF-PENTYGVNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKV--TF 287 (998)
T ss_pred HHhhC-ccccccccCCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCcc--cc
Confidence 44444 44444 34688899999999999999999999999999999999998999888777665443222100 00
Q ss_pred CcccCCCCCCCcceeEEecC------Cc-cceeEEEecCCCCCCCcccCCccccccccCCCCCCCCCCCchhhhhhhhhh
Q 000890 956 PILFRPSPSDLHFQQVFLKD------TD-ERACAYIAGPAPNRWGFTVDGMDLFKSIDNTSCSFDMPPKSEESMMLKDIE 1028 (1237)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~------~~-~~a~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1237)
+..|. ++..+.... .+ .|..+.+.|-.+.. .+
T Consensus 288 qk~f~------kp~rvve~~p~d~~~~p~Kq~~~s~s~L~~~p--------------------------~d--------- 326 (998)
T KOG2019|consen 288 QKLFD------KPRRVVEKGPADPGDLPKKQTKCSNSFLSNDP--------------------------LD--------- 326 (998)
T ss_pred ccccc------cCceeeeecCCCCCCCccceeEEEEEeecCCc--------------------------hh---------
Confidence 11111 111111111 11 13333333332210 00
Q ss_pred hHHhhhhhcCCchHHHHHHHHHHHH----HHHHHHHHHhhcCCe--eeEeeeeeccccCCceEEEEEE-ecCcccHHHHH
Q 000890 1029 KDQQRKLRSHPLFFGITMGLLAEII----NSRLFTTVRDSLGLT--YDVSFELNLFDRLKLGWYVISV-TSPPGKVHKAV 1101 (1237)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~lL~~~l----~srL~~~lRe~~Gla--Ysv~~~~~~~~~~~~g~~~i~~-~~~p~~~~~~~ 1101 (1237)
.+-.+++.+|+.++ +|.+++.|-| -|+. .++.+.+.... ..+.|.+.. ....++++++.
T Consensus 327 -----------~~etfaL~~L~~Ll~~gpsSp~yk~LiE-SGLGtEfsvnsG~~~~t--~~~~fsVGLqGvseediekve 392 (998)
T KOG2019|consen 327 -----------TYETFALKVLSHLLLDGPSSPFYKALIE-SGLGTEFSVNSGYEDTT--LQPQFSVGLQGVSEEDIEKVE 392 (998)
T ss_pred -----------HHHHHHHHHHHHHhcCCCccHHHHHHHH-cCCCcccccCCCCCccc--ccceeeeeeccccHHHHHHHH
Confidence 12245666777655 7999999999 4644 55655544332 457777776 34557899999
Q ss_pred HHHHHHHHhhhhCCCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCch-------hhHhhHHHHHhhcCH
Q 000890 1102 DACKNVLRGLHSNRIVQRELDRAKRTLLMRHEAEIKSNAYWLGLLAHLQASSVPRKDI-------SCIKDLMSLYEAASV 1174 (1237)
Q Consensus 1102 ~~~~~~l~~l~~~~it~~ELe~aK~~l~~~~~~~~~s~~~~~~~l~~~~~~~l~~~~~-------~~~~~~~~~l~~vT~ 1174 (1237)
+.+.+++++|...+|+.+.+|....++.-++... +...-++++......+....++ +.++.+...++.-..
T Consensus 393 ~lV~~t~~~lae~gfd~drieAil~qiEislk~q--st~fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~ 470 (998)
T KOG2019|consen 393 ELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQ--STGFGLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSK 470 (998)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHhhhhhhcc--ccchhHHHHHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhch
Confidence 9999999999999999999999877776555432 2222223332222222222221 233444455554466
Q ss_pred HHHHHHHHHhcCCCCce--EEEEeec
Q 000890 1175 EDIYLAYEQLRVDEDSL--YSCIGIA 1198 (1237)
Q Consensus 1175 edv~~~a~~~l~~~~~~--~~vvG~~ 1198 (1237)
.=++.++++|+..+... +++-++.
T Consensus 471 ~lfq~lIkkYilnn~h~~t~smqpd~ 496 (998)
T KOG2019|consen 471 KLFQPLIKKYILNNPHCFTFSMQPDP 496 (998)
T ss_pred hHHHHHHHHHHhcCCceEEEEecCCc
Confidence 67889999998776544 4444544
No 29
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=98.43 E-value=9.4e-07 Score=97.18 Aligned_cols=116 Identities=20% Similarity=0.170 Sum_probs=84.2
Q ss_pred cCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHh--cceeeeeee----
Q 000890 739 SNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCV--NHLINCSLE---- 812 (1237)
Q Consensus 739 ~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~--~~~~~~~~~---- 812 (1237)
.+|++|++++. ++++++|+++.|+.+.. +.+...+..++..++.+.| ++++++.++...+. .+|+++++.
T Consensus 76 ~~~~~v~~~~~-~TnGI~Y~~l~fdl~~l--~~e~l~yl~Ll~~ll~~lg-T~~~sy~el~~~i~~~tGGis~~~~~~~~ 151 (248)
T PF08367_consen 76 LGGIPVLFHEQ-PTNGIVYVRLYFDLSDL--PEEDLPYLPLLTDLLGELG-TKNYSYEELSNEIDLYTGGISFSIEVYTD 151 (248)
T ss_dssp CTTCEEEEEE----TTEEEEEEEEE-TTS---CCCHCCHHHHHHHCCCS--BSSS-HHHHHHHHHHHSSEEEEEEEEEEE
T ss_pred cCCccEEEEEc-CCCCeEEEEEEecCCCC--CHHHHHhHHHHHHHHHhCC-CCCCCHHHHHHHHHHhCCCeEEEeeeccC
Confidence 47999999886 47999999999999854 4567788899999998887 89999999988755 444444432
Q ss_pred ---cCcceEEEEEEEecCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 000890 813 ---STEEFIAMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYL 860 (1237)
Q Consensus 813 ---~~~~~~~~~~~~~~~~~~l~~~L~ll~~~l~~p~f~~~~~~~~k~~~~ 860 (1237)
.+.....+.+++.+..++++.+++++.+++.++.|++.+ |++..+.
T Consensus 152 ~~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~--rl~~ll~ 200 (248)
T PF08367_consen 152 YDDDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKE--RLKELLK 200 (248)
T ss_dssp ECTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HH--HHHHHHH
T ss_pred CCCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHH--HHHHHHH
Confidence 123345677899999999999999999999999998763 4444443
No 30
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=97.72 E-value=0.00033 Score=78.73 Aligned_cols=187 Identities=18% Similarity=0.207 Sum_probs=113.9
Q ss_pred EEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhc-CCCChhhHhhcCCeEEEEecCceEEEEE
Q 000890 189 GQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFL-GSKKREKLLGTGARSNAYTDFHHTVFHI 267 (1237)
Q Consensus 189 ~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~-Gt~~~~~l~~~G~~~na~t~~d~t~~~~ 267 (1237)
..|+||+||.+-+. -..-+.+++ -+.|.-.|-.+--|+||||||++-. .+.+ ---||+|++.+..|-.
T Consensus 2 IvL~NGVRiFin~~--M~KDIYlGI-s~FGFe~DI~~iLGiAHLLEHILIsFD~~~--------F~ANASTaRsYMSFWC 70 (590)
T PF03410_consen 2 IVLSNGVRIFINPS--MKKDIYLGI-SNFGFENDIGEILGIAHLLEHILISFDSSK--------FLANASTARSYMSFWC 70 (590)
T ss_pred eEecCceEEEecCc--cccceEEee-cccccccchHHHHhHHHHHHHHeeecchHH--------hhcccchhhhhhhhhh
Confidence 36999999998554 222123333 2568778888899999999998744 1111 1259999999999999
Q ss_pred EeCCCCCCCccccHHHHHHHHHHHHcCC-----CCChHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhccCCCCCCCCC
Q 000890 268 HSPTYTKDSDEDLLPLVLDALNEIAFHP-----KFLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFP 342 (1237)
Q Consensus 268 ~~~~~~~~~~~~~l~~~l~ll~d~~~~p-----~f~~~~~~~ek~~v~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 342 (1237)
.+... +..-.++..+..|+|.- .|+...++.--+.+.+|.--+.. -...++ .+.-|.++..| -
T Consensus 71 ~si~g------~~~~DAvrtliSWFF~~g~Lk~~F~~~~i~~hikELENEYYFRnE-vfHCmD-vLtfL~gGDLY----N 138 (590)
T PF03410_consen 71 KSIRG------RTYIDAVRTLISWFFDNGKLKDNFSRSKIKNHIKELENEYYFRNE-VFHCMD-VLTFLGGGDLY----N 138 (590)
T ss_pred hhccC------CChhHHHHHHHHHhhcCCcccccccHhHHHHHHHHHhhhhhhhhh-HHHHHH-HHHHhcCCccc----C
Confidence 88763 34556677777777664 35544444444444444322211 112222 23344544443 2
Q ss_pred CCCHHHhcccC--HHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCC
Q 000890 343 IGLEEQIKKWD--ADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETA 402 (1237)
Q Consensus 343 ~G~~~~i~~it--~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~ 402 (1237)
+|-...+.+++ .+-|.+=.+ .....|.+|+|- .++ +.++.++++.||.+|.-+...
T Consensus 139 GGRi~ML~~l~~i~~mL~~RM~-~I~GpniVIFVk-~l~--~~~l~lL~~TFGtLP~cP~~I 196 (590)
T PF03410_consen 139 GGRIDMLNNLNDIRNMLSNRMH-RIIGPNIVIFVK-ELN--PNILSLLSNTFGTLPSCPLTI 196 (590)
T ss_pred CchHHHHhhhHHHHHHHHHHHH-hhcCCcEEEEEe-ccC--HHHHHHHHHhcCCCCCCcccc
Confidence 46666666654 223333333 345566666655 588 588899999999999765443
No 31
>PHA03081 putative metalloprotease; Provisional
Probab=97.48 E-value=0.00097 Score=75.18 Aligned_cols=188 Identities=19% Similarity=0.199 Sum_probs=114.8
Q ss_pred EEccCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhcCCCChhhHhhcCCeEEEEecCceEEEEEE
Q 000890 189 GQLRNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFLGSKKREKLLGTGARSNAYTDFHHTVFHIH 268 (1237)
Q Consensus 189 ~~L~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~Gt~~~~~l~~~G~~~na~t~~d~t~~~~~ 268 (1237)
..|+||+++++-+.- ..-+.+++ -+.|.-.|-.+-.|+||||||++-.=- ... --.||+|++.+..|...
T Consensus 2 i~~~ngvr~f~~~~m--~kdiy~gi-~~fgfe~di~~~lg~ahllehili~fd--~~~-----f~anast~r~ymsfwc~ 71 (595)
T PHA03081 2 IVLSNGVRIFINPSM--KKDIYLGI-SNFGFENDIGEILGIAHLLEHILISFD--SSK-----FVANASTARSYMSFWCK 71 (595)
T ss_pred eEecCceEEEecCcc--ccceEEee-cccccccchHHHHhHHHHHHHHeeecc--hHH-----hcccchhhhhhHhHhhH
Confidence 369999999986542 22123333 256777788889999999999875411 111 12599999999999988
Q ss_pred eCCCCCCCccccHHHHHHHHHHHHcCCC-----CChHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhccCCCCCCCCCC
Q 000890 269 SPTYTKDSDEDLLPLVLDALNEIAFHPK-----FLSSRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPI 343 (1237)
Q Consensus 269 ~~~~~~~~~~~~l~~~l~ll~d~~~~p~-----f~~~~~~~ek~~v~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 343 (1237)
+... +....++..+..|+|.+. |....++.--+.+.+|.--+. .-...++ .+.-|.++..| -+
T Consensus 72 sirg------~~y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYYFRn-EvfHCmD-vLTfL~gGDLY----NG 139 (595)
T PHA03081 72 SIRG------RSYIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYYFRN-EVFHCMD-VLTFLGGGDLY----NG 139 (595)
T ss_pred hhcC------CchHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhhhhh-hhHHHHH-HHHHhcCCccc----CC
Confidence 8763 346678888889998875 443333333333333332111 1112222 23444544443 25
Q ss_pred CCHHHhcccC--HHHHHHHHHhcccCCCcEEEEEccCCChHHHHHHHHHHhcCCCCCCCCC
Q 000890 344 GLEEQIKKWD--ADKIRKFHERWYFPANATLYIVGDIDNVSKTIDQIEAVFGHTGNENETA 402 (1237)
Q Consensus 344 G~~~~i~~it--~e~l~~f~~~~y~p~n~~l~v~Gdi~~~~~~~~~i~~~f~~~~~~~~~~ 402 (1237)
|-...+.+++ ++-|.+=. +-....|.+|+|- .++ +.++.++++.||.+|.-+...
T Consensus 140 GRi~ML~~l~~i~~~L~~RM-~~I~GpniVIFVk-~ln--~~~l~lL~~TFGtLP~~P~~I 196 (595)
T PHA03081 140 GRIDMLDNLNDVRDMLSNRM-HRISGPNIVIFVK-ELN--PNTLSLLNNTFGTLPSCPETI 196 (595)
T ss_pred chHHHHhhhHHHHHHHHHHH-HhhcCCcEEEEEe-ccC--HHHHHHHHHhcCCCCCCcccc
Confidence 7777776664 22223323 3355566666655 577 578899999999999765443
No 32
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=96.15 E-value=0.16 Score=57.89 Aligned_cols=184 Identities=16% Similarity=0.174 Sum_probs=94.1
Q ss_pred EEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcceeeeeeecCc
Q 000890 736 LRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHLINCSLESTE 815 (1237)
Q Consensus 736 ~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~~~~~~~~~~ 815 (1237)
..|+||+||.+.+. -+.-+|+++. +-|.-.+=.+-.|+||+++|.+- .++...+. ++++|.+
T Consensus 2 IvL~NGVRiFin~~--M~KDIYlGIs-~FGFe~DI~~iLGiAHLLEHILI------sFD~~~F~---------ANASTaR 63 (590)
T PF03410_consen 2 IVLSNGVRIFINPS--MKKDIYLGIS-NFGFENDIGEILGIAHLLEHILI------SFDSSKFL---------ANASTAR 63 (590)
T ss_pred eEecCceEEEecCc--cccceEEeec-ccccccchHHHHhHHHHHHHHee------ecchHHhh---------cccchhh
Confidence 47999999988764 3566788884 33443334567899999999874 23433221 2222444
Q ss_pred ceEEEEEEEecCc-chHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCCC
Q 000890 816 EFIAMEFRFTLRD-NGMRAAFQLLHMVLEH-----SVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDERF 889 (1237)
Q Consensus 816 ~~~~~~~~~~~~~-~~l~~~L~ll~~~l~~-----p~f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 889 (1237)
.+.+ |=+.+.. +....+..-+..|+.+ ..|+...++.....+..|+--+ + +-.-...++. .+.|+-.|
T Consensus 64 sYMS--FWC~si~g~~~~DAvrtliSWFF~~g~Lk~~F~~~~i~~hikELENEYYFR--n-EvfHCmDvLt-fL~gGDLY 137 (590)
T PF03410_consen 64 SYMS--FWCKSIRGRTYIDAVRTLISWFFDNGKLKDNFSRSKIKNHIKELENEYYFR--N-EVFHCMDVLT-FLGGGDLY 137 (590)
T ss_pred hhhh--hhhhhccCCChhHHHHHHHHHhhcCCcccccccHhHHHHHHHHHhhhhhhh--h-hHHHHHHHHH-HhcCCccc
Confidence 3322 3222222 2233444444444433 2344444443333333322111 0 0001122222 33444455
Q ss_pred CCCCHhHHhhcC--HHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCC
Q 000890 890 VEPTPKSLENLN--LKSVKEAVMNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATN 946 (1237)
Q Consensus 890 ~~~t~~~l~~lt--~e~l~~~~~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~ 946 (1237)
.-|....+++++ .+-|.. ..+.+.+.|.+++| -..+. .+..++++.||.+|.-+
T Consensus 138 NGGRi~ML~~l~~i~~mL~~-RM~~I~GpniVIFV-k~l~~-~~l~lL~~TFGtLP~cP 193 (590)
T PF03410_consen 138 NGGRIDMLNNLNDIRNMLSN-RMHRIIGPNIVIFV-KELNP-NILSLLSNTFGTLPSCP 193 (590)
T ss_pred CCchHHHHhhhHHHHHHHHH-HHHhhcCCcEEEEE-eccCH-HHHHHHHHhcCCCCCCc
Confidence 556556666552 122222 23344455655554 45664 47889999999999743
No 33
>PHA03081 putative metalloprotease; Provisional
Probab=95.92 E-value=0.15 Score=58.23 Aligned_cols=183 Identities=15% Similarity=0.174 Sum_probs=95.6
Q ss_pred EEecCCcEEEEEecCCCCceEEEEEEECCCCCCCCcccchhhHHHHHHHhcCCcCCCCCHHHHHHHHhcceeeeeeecCc
Q 000890 736 LRLSNGIPINYKISKSEAQGGVMRLIVGGGRAAESSESRGAVIVGVRTLSEGGRVGKFSREQVELFCVNHLINCSLESTE 815 (1237)
Q Consensus 736 ~~L~NGv~v~~~~~~~~~~~v~~~l~~~~G~~~e~~~~~G~a~l~~~~l~~gg~~~~~s~~el~~~~~~~~~~~~~~~~~ 815 (1237)
..|+||+++.+.+. ....+|+++. .-|.-.+-.+-.|++|+++|.+-. ++...+. ++++|.+
T Consensus 2 i~~~ngvr~f~~~~--m~kdiy~gi~-~fgfe~di~~~lg~ahllehili~------fd~~~f~---------anast~r 63 (595)
T PHA03081 2 IVLSNGVRIFINPS--MKKDIYLGIS-NFGFENDIGEILGIAHLLEHILIS------FDSSKFV---------ANASTAR 63 (595)
T ss_pred eEecCceEEEecCc--cccceEEeec-ccccccchHHHHhHHHHHHHHeee------cchHHhc---------ccchhhh
Confidence 47899999988764 3566788874 334433445678999999998742 3332221 1222333
Q ss_pred ceEEEEEEEecCc-chHHHHHHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHcCcCChHHHHHHHHHHHHhcCCCCC
Q 000890 816 EFIAMEFRFTLRD-NGMRAAFQLLHMVLEHSV-----WLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDERF 889 (1237)
Q Consensus 816 ~~~~~~~~~~~~~-~~l~~~L~ll~~~l~~p~-----f~~~~~~~~k~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 889 (1237)
.+.+ |-+.+.. +....+..-+..|+.+.. |+...++.....+..|+--+ + +-.-...++. .+.|+-.|
T Consensus 64 ~yms--fwc~sirg~~y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYYFR--n-EvfHCmDvLT-fL~gGDLY 137 (595)
T PHA03081 64 SYMS--FWCKSIRGRSYIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYYFR--N-EVFHCMDVLT-FLGGGDLY 137 (595)
T ss_pred hhHh--HhhHhhcCCchHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhhhh--h-hhHHHHHHHH-HhcCCccc
Confidence 3222 2222221 234566666666766554 33333333222222222111 0 0001122222 33444456
Q ss_pred CCCCHhHHhhcCHHHHHHHH---HhhccCCCeEEEEEcCCCHHHHHHHHHHhhcccCCCC
Q 000890 890 VEPTPKSLENLNLKSVKEAV---MNQFVGNNMEVSIVGDFSEEEIESCILDYLGTVRATN 946 (1237)
Q Consensus 890 ~~~t~~~l~~lt~e~l~~~~---~~~~~~~n~~l~IvGd~d~~~v~~li~~~~g~l~~~~ 946 (1237)
.-|-...++++ ++++... .+.+.+.|.+++| -..+. .+..++.+.||.+|.-+
T Consensus 138 NGGRi~ML~~l--~~i~~~L~~RM~~I~GpniVIFV-k~ln~-~~l~lL~~TFGtLP~~P 193 (595)
T PHA03081 138 NGGRIDMLDNL--NDVRDMLSNRMHRISGPNIVIFV-KELNP-NTLSLLNNTFGTLPSCP 193 (595)
T ss_pred CCchHHHHhhh--HHHHHHHHHHHHhhcCCcEEEEE-eccCH-HHHHHHHHhcCCCCCCc
Confidence 55666666665 3333332 3334455655554 45664 47889999999999743
No 34
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=89.46 E-value=2.2 Score=47.03 Aligned_cols=106 Identities=17% Similarity=0.207 Sum_probs=62.8
Q ss_pred cCCcEEEEEECCCCCceEEEEEEEcccCCCCCCCCCCHHHHHHHHHhc-CCCChhh--H----h-hcCC---eEEEEecC
Q 000890 192 RNGLRYLILPNKVPASRFEAHMEIHAGSIDEEDDEQGIAHMIEHVAFL-GSKKREK--L----L-GTGA---RSNAYTDF 260 (1237)
Q Consensus 192 ~NGl~v~~~~~~~~~~~v~~~l~v~~Gs~~e~~~~~G~ahllehml~~-Gt~~~~~--l----~-~~G~---~~na~t~~ 260 (1237)
-+|++|+..+.++... +.+.+.|+.+...+ ++..=+ -|+..++.+ ||++++. + . .+|+ ++.+.++.
T Consensus 76 ~~~~~v~~~~~~TnGI-~Y~~l~fdl~~l~~-e~l~yl-~Ll~~ll~~lgT~~~sy~el~~~i~~~tGGis~~~~~~~~~ 152 (248)
T PF08367_consen 76 LGGIPVLFHEQPTNGI-VYVRLYFDLSDLPE-EDLPYL-PLLTDLLGELGTKNYSYEELSNEIDLYTGGISFSIEVYTDY 152 (248)
T ss_dssp CTTCEEEEEE---TTE-EEEEEEEE-TTS-C-CCHCCH-HHHHHHCCCS-BSSS-HHHHHHHHHHHSSEEEEEEEEEEEE
T ss_pred cCCccEEEEEcCCCCe-EEEEEEecCCCCCH-HHHHhH-HHHHHHHHhCCCCCCCHHHHHHHHHHhCCCeEEEeeeccCC
Confidence 3789999988876554 69999999986543 334444 455565554 8988752 2 2 2343 33333322
Q ss_pred -------ceEEEEEEeCCCCCCCccccHHHHHHHHHHHHcCCCCChHHHHHHHHHH
Q 000890 261 -------HHTVFHIHSPTYTKDSDEDLLPLVLDALNEIAFHPKFLSSRVEKERRAI 309 (1237)
Q Consensus 261 -------d~t~~~~~~~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v 309 (1237)
-...+...++. ++++++++++.+++.++.|+..+ |.+..+
T Consensus 153 ~~~~~~~~~l~is~k~L~-------~~~~~~~~ll~eil~~~~f~d~~--rl~~ll 199 (248)
T PF08367_consen 153 DDDDKYRPYLVISAKCLD-------EKLDEAFELLSEILTETDFDDKE--RLKELL 199 (248)
T ss_dssp CTECCCEEEEEEEEEEEG-------GGHHHHHHHHHHHHHCB-TT-HH--HHHHHH
T ss_pred CCccceeEEEEEEEEeHh-------hhHHHHHHHHHHHHhccCCCcHH--HHHHHH
Confidence 23455556665 78999999999999999998764 444433
No 35
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=38.71 E-value=53 Score=23.07 Aligned_cols=24 Identities=29% Similarity=0.427 Sum_probs=17.8
Q ss_pred HHHHhhh-hCCCCHHHHHHHHHHHH
Q 000890 1106 NVLRGLH-SNRIVQRELDRAKRTLL 1129 (1237)
Q Consensus 1106 ~~l~~l~-~~~it~~ELe~aK~~l~ 1129 (1237)
+.|+.+. ++-||++|+++.|..++
T Consensus 6 ~~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 6 EKLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 3445543 46799999999998875
No 36
>KOG3859 consensus Septins (P-loop GTPases) [Cell cycle control, cell division, chromosome partitioning]
Probab=28.98 E-value=3.4e+02 Score=29.88 Aligned_cols=122 Identities=15% Similarity=0.155 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCeeeEeeeeeccccCCceEEEEEEecCcccHHHHHHHH-HHHHH-------hh-h
Q 000890 1042 FGITMGLLAEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTSPPGKVHKAVDAC-KNVLR-------GL-H 1112 (1237)
Q Consensus 1042 ~~~~~~lL~~~l~srL~~~lRe~~GlaYsv~~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~-~~~l~-------~l-~ 1112 (1237)
+....+++...+..+|.++|.-+..+.|--.+ .-...+|+.+..++--++++.+ ++.|+ -+ +
T Consensus 115 yk~iVdyidaQFEaYLQEELKi~Rsl~~~hDs---------RiH~CLYFI~PTGH~LKslDLvtmk~LdskVNIIPvIAK 185 (406)
T KOG3859|consen 115 YKPIVDYIDAQFEAYLQEELKIRRSLFTYHDS---------RIHVCLYFISPTGHSLKSLDLVTMKKLDSKVNIIPVIAK 185 (406)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhccC---------ceEEEEEEecCCCcchhHHHHHHHHHHhhhhhhHHHHHH
Confidence 35677888889999999999887766543221 1224567777766655565543 22222 22 2
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCchhhHhhHHHHHhhcCHHHHHHHHHHhcCCCCceE
Q 000890 1113 SNRIVQRELDRAKRTLLMRHEAEIKSNAYWLGLLAHLQASSVPRKDISCIKDLMSLYEAASVEDIYLAYEQLRVDEDSLY 1192 (1237)
Q Consensus 1113 ~~~it~~ELe~aK~~l~~~~~~~~~s~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~vT~edv~~~a~~~l~~~~~~~ 1192 (1237)
..-|+..||.+.|..++..+.. + ..+.|..|.+ .-|++.++..++..+ -+
T Consensus 186 aDtisK~eL~~FK~kimsEL~s----n--------gv~IYqfPtD-------------detva~~N~~mn~~l-----PF 235 (406)
T KOG3859|consen 186 ADTISKEELKRFKIKIMSELVS----N--------GVQIYQFPTD-------------DETVAKANSEMNHSL-----PF 235 (406)
T ss_pred hhhhhHHHHHHHHHHHHHHHHh----c--------Cceeeeccch-------------HHHHHHHHHHhhcCC-----ce
Confidence 3458888999988877665532 2 1233444431 234556666665443 17
Q ss_pred EEEeecCCCC
Q 000890 1193 SCIGIAGAQA 1202 (1237)
Q Consensus 1193 ~vvG~~~~~~ 1202 (1237)
.|||..+...
T Consensus 236 AVvGSte~vK 245 (406)
T KOG3859|consen 236 AVVGSTEEVK 245 (406)
T ss_pred eEecchHhhh
Confidence 8899876554
Done!