Your job contains 1 sequence.
>000891
MEAKVKRPRGRPRKRKRPEDEDVTDGAGGKKRVVAVEAKPIALVGRYVLKEFESGIFLGK
IVYYESGLYRVDYEDGDCEDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEK
SNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDSCEHVRETDAGLE
AETPLLPPPQLPPSSGTIALMRVLRRHLETLSSDGSELASNCLRCIDWSLLDTLTWPVYV
VQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDARE
ESEVGLDPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKG
TEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAI
NKVGPIVTIGTSLRGAELFGIDLYERVFLGTCNHLLVLNASSNTEQYIRYYNPIDIPKVL
QALLSSVQHVSLYLGICKAILHYWDIPESVVPFMGMETNTINAKADEKFCSQSHHPPIKE
SQRITDMVEAGNASSNNGSNVDNVAVSSLHTFMNTMSQTGVPFVQSNDITVTEKLQDCLV
LNGKLPGHVKMESAMSTGSVSQQADPSDVTYQSLVDRSSAIDFMTCTSQISNDGNSGHAS
SCLSPNISFLSKERNHGGLLGVGTNYANKCAFMGSVFKPHSYINQYMHGEFAAAAAAKLA
VLSSEESQASEMHKSGNTRKAMSGSISLQAKAFSSTASRFFWPCSERKLWEVPRERCSWC
YSCKSPPSNRRGCMLNSAMTVATKSAMKILNGLLAPKTGEGNLPTIVTYIMYMEESLCGL
ISGPFRSVSYRKKWRKQVAEACTLNSIKALLLELEENICHIALSGDWVKLMDDWLGDSSV
IQSASCNFVTTQKRGLSGKRGRKHSVISEVTADDCNDQSFSWWQGGKSTKLISKKAILPH
TIIRNAARRGGLRKISGVNYTAEMPKRSRQLVWRAAVERSKTVSQLALQVRYIDLHVRWS
ELVRPEQNLQDGKGPETEAFAFRNAIICDKKIVENKIRYGVAFGIHRHLPSRVMKNIIDI
ELSQDGKEKYWFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKASRKDLF
SYLVCRRDKIEKCACASCQIDVLLGNAVKCGTCQGMLITNLSVFCFRDVLGFPVVYLRFY
VNIYVKNFTDNIIFLRILDFGFPFLMLSDNYYPFLL
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000891
(1236 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2162509 - symbol:AT5G22760 "AT5G22760" species... 1429 1.3e-267 3
UNIPROTKB|F5GXF5 - symbol:BPTF "Nucleosome-remodeling fac... 134 2.5e-09 6
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 189 4.1e-09 3
UNIPROTKB|E7ETD6 - symbol:BPTF "Nucleosome-remodeling fac... 134 4.6e-09 6
UNIPROTKB|Q12830 - symbol:BPTF "Nucleosome-remodeling fac... 134 7.9e-09 6
UNIPROTKB|Q5TH12 - symbol:ZMYND8 "Protein kinase C-bindin... 143 1.5e-08 1
UNIPROTKB|E1C5C7 - symbol:BPTF "Uncharacterized protein" ... 136 1.7e-08 6
UNIPROTKB|E1C5C8 - symbol:BPTF "Uncharacterized protein" ... 136 1.8e-08 6
UNIPROTKB|F1LX76 - symbol:F1LX76 "Uncharacterized protein... 138 2.6e-08 6
UNIPROTKB|F1M1V5 - symbol:F1M1V5 "Uncharacterized protein... 138 2.9e-08 6
FB|FBgn0000541 - symbol:E(bx) "Enhancer of bithorax" spec... 132 3.0e-08 5
UNIPROTKB|F1M1V4 - symbol:F1M1V4 "Uncharacterized protein... 138 3.2e-08 6
UNIPROTKB|D5LMF5 - symbol:zmynd8 "Zinc finger and MYND do... 163 1.1e-07 1
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 163 1.1e-07 1
UNIPROTKB|F1PFZ4 - symbol:BPTF "Uncharacterized protein" ... 134 1.2e-07 5
UNIPROTKB|J9JHE8 - symbol:BPTF "Uncharacterized protein" ... 134 1.5e-07 5
UNIPROTKB|F1N3U7 - symbol:BPTF "Uncharacterized protein" ... 134 1.9e-07 5
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 130 3.7e-07 1
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 144 5.8e-07 1
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 149 1.1e-06 1
TAIR|locus:2163961 - symbol:AT5G63900 "AT5G63900" species... 149 1.3e-06 1
UNIPROTKB|F1NMG7 - symbol:F1NMG7 "Uncharacterized protein... 149 1.4e-06 1
ASPGD|ASPL0000065953 - symbol:AN7300 species:162425 "Emer... 151 1.4e-06 1
ZFIN|ZDB-GENE-030131-2199 - symbol:prkcbp1l "protein kina... 161 1.5e-06 2
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 144 1.7e-06 1
ZFIN|ZDB-GENE-121031-4 - symbol:chd3 "chromodomain helica... 138 2.1e-06 2
UNIPROTKB|F1MY77 - symbol:ZMYND8 "Uncharacterized protein... 155 2.2e-06 2
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 157 2.5e-06 3
UNIPROTKB|F1NRM1 - symbol:F1NRM1 "Uncharacterized protein... 146 2.5e-06 1
ZFIN|ZDB-GENE-041119-1 - symbol:zmynd8 "zinc finger, MYND... 149 3.5e-06 1
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 144 4.2e-06 1
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 143 5.1e-06 1
UNIPROTKB|F1LWS6 - symbol:F1LWS6 "Uncharacterized protein... 138 5.2e-06 4
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 161 5.3e-06 2
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 143 5.5e-06 1
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 143 5.7e-06 1
UNIPROTKB|Q2HXV3 - symbol:ZMYND8 "Protein kinase C-bindin... 159 6.3e-06 2
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 146 6.4e-06 1
UNIPROTKB|E1B6X6 - symbol:BAZ1B "Uncharacterized protein"... 115 7.0e-06 3
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 118 7.1e-06 1
UNIPROTKB|J9P3J2 - symbol:BAZ1B "Uncharacterized protein"... 115 7.2e-06 3
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 144 7.7e-06 2
UNIPROTKB|H0Y9U6 - symbol:WHSC1 "Histone-lysine N-methylt... 136 8.5e-06 1
UNIPROTKB|E2RED7 - symbol:BAZ1B "Uncharacterized protein"... 115 8.7e-06 3
UNIPROTKB|J9PAU7 - symbol:BAZ1B "Uncharacterized protein"... 115 8.8e-06 3
UNIPROTKB|Q9UIG0 - symbol:BAZ1B "Tyrosine-protein kinase ... 115 8.9e-06 2
UNIPROTKB|F1NME8 - symbol:Gga.29865 "Uncharacterized prot... 157 9.1e-06 2
SGD|S000004680 - symbol:RCO1 "Essential subunit of the hi... 127 1.1e-05 3
POMBASE|SPAC16C9.05 - symbol:cph1 "Clr6 histone deacetyla... 138 1.1e-05 1
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 140 1.2e-05 1
ZFIN|ZDB-GENE-120215-90 - symbol:si:ch73-39g20.1 "si:ch73... 149 1.4e-05 2
UNIPROTKB|K7EJ43 - symbol:PHF12 "PHD finger protein 12" s... 130 1.4e-05 1
UNIPROTKB|F5H0X3 - symbol:ZMYND8 "Protein kinase C-bindin... 155 2.0e-05 2
UNIPROTKB|I3LCE6 - symbol:BAZ1B "Uncharacterized protein"... 115 2.3e-05 2
ZFIN|ZDB-GENE-030131-2581 - symbol:whsc1 "Wolf-Hirschhorn... 135 2.5e-05 2
CGD|CAL0003038 - symbol:orf19.6506 species:5476 "Candida ... 138 2.7e-05 2
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 161 3.0e-05 3
UNIPROTKB|E2R8R1 - symbol:ZMYND8 "Uncharacterized protein... 152 3.4e-05 2
UNIPROTKB|B7ZM62 - symbol:ZMYND8 "ZMYND8 protein" species... 159 3.9e-05 3
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 157 4.2e-05 4
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 142 4.5e-05 2
UNIPROTKB|Q2HXV1 - symbol:ZMYND8 "RACK7 isoform l" specie... 159 5.1e-05 3
UNIPROTKB|J3KPU3 - symbol:ZMYND8 "Protein kinase C-bindin... 159 5.9e-05 3
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 136 7.1e-05 1
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 155 7.4e-05 3
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 155 7.4e-05 3
UNIPROTKB|F1NP02 - symbol:PHF21A "Uncharacterized protein... 133 7.6e-05 1
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 155 7.8e-05 3
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 145 7.9e-05 3
UNIPROTKB|F1P5P6 - symbol:PHF21A "Uncharacterized protein... 133 8.4e-05 1
ZFIN|ZDB-GENE-091204-206 - symbol:si:dkey-21n12.3 "si:dke... 135 9.0e-05 2
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 155 9.3e-05 3
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 155 9.3e-05 3
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 153 9.3e-05 3
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 153 9.4e-05 3
UNIPROTKB|H0YDG9 - symbol:RSF1 "Remodeling and spacing fa... 126 9.5e-05 2
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 155 9.6e-05 3
UNIPROTKB|J9NUG7 - symbol:WHSC1 "Uncharacterized protein"... 136 0.00010 1
UNIPROTKB|F1S8S0 - symbol:WHSC1 "Uncharacterized protein"... 136 0.00010 1
UNIPROTKB|F1PK46 - symbol:WHSC1 "Uncharacterized protein"... 136 0.00010 1
UNIPROTKB|F1MMY4 - symbol:WHSC1 "Uncharacterized protein"... 136 0.00010 1
UNIPROTKB|F1MS13 - symbol:PHF21A "Uncharacterized protein... 132 0.00010 1
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd... 154 0.00012 2
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN... 154 0.00012 2
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 139 0.00012 2
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 147 0.00013 3
UNIPROTKB|I3LDB0 - symbol:I3LDB0 "Uncharacterized protein... 130 0.00014 1
UNIPROTKB|Q9ULU4 - symbol:ZMYND8 "Protein kinase C-bindin... 155 0.00015 3
UNIPROTKB|F1SBF4 - symbol:ZMYND8 "Uncharacterized protein... 142 0.00018 2
UNIPROTKB|G3V661 - symbol:Baz1b "Bromodomain adjacent to ... 115 0.00019 2
UNIPROTKB|F1PQV6 - symbol:PHF21A "Uncharacterized protein... 130 0.00019 1
UNIPROTKB|Q96BD5 - symbol:PHF21A "PHD finger protein 21A"... 130 0.00019 1
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 138 0.00019 2
UNIPROTKB|E9PTL0 - symbol:Zmynd8 "Protein Zmynd8" species... 147 0.00020 2
RGD|1560612 - symbol:Phf21a "PHD finger protein 21A" spec... 129 0.00022 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 147 0.00023 3
MGI|MGI:2384756 - symbol:Phf21a "PHD finger protein 21A" ... 129 0.00023 1
TAIR|locus:2078092 - symbol:AT3G05670 "AT3G05670" species... 119 0.00024 2
MGI|MGI:1353499 - symbol:Baz1b "bromodomain adjacent to z... 115 0.00024 2
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 155 0.00024 3
WARNING: Descriptions of 21 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2162509 [details] [associations]
symbol:AT5G22760 "AT5G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Prosite:PS00018 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018247 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00532034 RefSeq:NP_197668.2 UniGene:At.43647
PRIDE:F4KBB1 EnsemblPlants:AT5G22760.1 GeneID:832339
KEGG:ath:AT5G22760 OMA:SHFPSIV Uniprot:F4KBB1
Length = 1566
Score = 1429 (508.1 bits), Expect = 1.3e-267, Sum P(3) = 1.3e-267
Identities = 277/485 (57%), Positives = 352/485 (72%)
Query: 694 GSVFKPHSYINQYMHGEFXXXXXXKLAVLSSEESQASEMHKSGNTRKAMSGSISLQAKAF 753
G FKPHSYIN Y +GE LA+L SEE+ ++HK N +KA S +I LQ KAF
Sbjct: 626 GLSFKPHSYINHYTNGELAASAAATLAILMSEETHEPDLHKFSNAKKAASSNILLQMKAF 685
Query: 754 SSTASRFFWPCSERKLWEVPRERCSWCYSCKSPPSNRRGCMLNSAMTVATKSAMKILNGL 813
S AS FFWP ++K E+ RERC WC+SCK ++RRGCMLN+A+T ATKSAMKI +GL
Sbjct: 686 SIVASSFFWPSPDKK--EITRERCGWCHSCKLTSASRRGCMLNAAVTGATKSAMKIYSGL 743
Query: 814 LAPKTGEGNLPTIVTYIMYMEESLCGLISGPFRSVSYRKKWRKQVAEACTLNSIKALLLE 873
K GEG L I Y +Y+EESL GLI+GPF S S R +WRK++ EA T ++KALLLE
Sbjct: 744 FPLKNGEGVLSRIAAYALYLEESLRGLIAGPFLSESLRYQWRKKLEEASTCKAMKALLLE 803
Query: 874 LEENICHIALSGDWVKLMDDWLGDSSVIQSASCNFVTTQKRGLSGKRGRKHSVISEVTAD 933
LEENIC IALS DW+KLMDDWL + S+ QSA TQKR G+R +++ +E TA
Sbjct: 804 LEENICSIALSSDWLKLMDDWLIELSIFQSAPVTVGATQKRR-PGRRKQRNQ--AENTAQ 860
Query: 934 DCNDQSFSWWQGGKSTKLISKKAILPHTIIRNAARRGGLRKISGVNYT--AEMPKRSRQL 991
+D SF+WW+GGK +K+I KA+L I+ AA +GG +K NY + +PKRSR+
Sbjct: 861 GSDDDSFTWWRGGKLSKIILLKAVLSKPKIKKAAWQGGTKKFPEFNYGDGSYIPKRSRRS 920
Query: 992 VWRAAVERSKTVSQLALQVRYIDLHVRWSELVRPEQNLQDGKGPETEAFAFRNAIICDKK 1051
+W+AAVE SK +SQLALQVRY+D+++RWSELVRPEQN+QD KGPETEA FRNA IC KK
Sbjct: 921 IWKAAVESSKNISQLALQVRYLDMNIRWSELVRPEQNVQDVKGPETEATIFRNASICVKK 980
Query: 1052 IVENKIRYGVAFGIHRHLPSRVMKNIIDIELSQDGKEKYWFPETCLPLFLIKEYEERVDM 1111
I++NK+RYGV FG +HLPSRVMKN+I++E S+D EKYWF E +PL+LIKEYEE +
Sbjct: 981 IIDNKVRYGVVFGNQKHLPSRVMKNVIEVEKSEDRNEKYWFHEARVPLYLIKEYEESLHR 1040
Query: 1112 VI-APSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKCACASCQIDVLLGNAVKC 1170
V+ P KKPS ++S+ QK+QLKASR ++FSYL RRD EKC+CASC +DV L +++ C
Sbjct: 1041 VVHIPFIKKPSRKISKLQKRQLKASRANIFSYLASRRDNTEKCSCASCHLDVFLRDSITC 1100
Query: 1171 GTCQG 1175
TCQG
Sbjct: 1101 STCQG 1105
Score = 928 (331.7 bits), Expect = 1.3e-267, Sum P(3) = 1.3e-267
Identities = 183/326 (56%), Positives = 222/326 (68%)
Query: 198 IALMRVLRRHLETLSSDGSELASNCLRCIDWSLLDTLTWPVYVVQYLTSMGYIKGTQWTG 257
+ALMR L+ HLE LSS+GSE+AS CLRCIDWSLLD LTWPVY+VQY +MG+ G W
Sbjct: 234 VALMRALKGHLERLSSEGSEVASKCLRCIDWSLLDALTWPVYLVQYFAAMGHASGPLWRF 293
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDAASYG-SE 316
F + V +EY S KL ILQILCDDV D +LRAEID REESEVG D D + E
Sbjct: 294 FNEFVVEKEYCSSPVVMKLKILQILCDDVFDVADLRAEIDNREESEVGFDTDGVTAELPE 353
Query: 317 IARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPG--VDVDGNG 374
RRVHPRF+KT K +E EF A N + + +K + T+ G D+D N
Sbjct: 354 NGPRRVHPRFAKTSASKEKELSEFVAVNHGISSLSDSKNWSSRYTDGGPNGDSPDLDANS 413
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
DECR+CGMDGTLLCCDGCP AYH+RCIGV KMY+P+G WYCPEC I K+GP V TSLR
Sbjct: 414 DECRLCGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPECTIKKMGPTVVYKTSLR 473
Query: 435 GAELFGIDLYERVFLGTCNHLLVLNASSNTEQYIRYYNPIDIPKVLQALLSSVQHVSLYL 494
GA FG+D + R+FLGTCN LLVL + + + I+YYN DIPKV+ LLS+ H YL
Sbjct: 474 GAVYFGVDPHGRLFLGTCNLLLVLKINVHADADIKYYNVTDIPKVVLVLLSATNHRLEYL 533
Query: 495 GICKAILHYWDIPESVVPFMG-METN 519
ICKAI YWD+P V+ ++ +ET+
Sbjct: 534 YICKAISQYWDLPGGVISYLRTVETD 559
Score = 258 (95.9 bits), Expect = 1.3e-267, Sum P(3) = 1.3e-267
Identities = 63/145 (43%), Positives = 93/145 (64%)
Query: 29 GKKRVVAVE-AKPIALVGRYVLKEFE-SGIFLGKIVYYESGLYRVDYEDGDCEDLDSSEL 86
GK+ V V+ A P +L+GRYVLK+ + SG+FLGKIV Y +GLYRV+YEDGD EDL++ L
Sbjct: 28 GKRPVFEVKVAVPRSLLGRYVLKDVDDSGVFLGKIVSYNTGLYRVEYEDGDFEDLETCYL 87
Query: 87 RQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGD-----AKSEVDRIEAST 141
RQ ++ ++ FD +L RR KLDD+++K+ K + L+ K + + S V +E S
Sbjct: 88 RQLIIGDSYFDDELRARRSKLDDFILKKDEKKKTDCLKNKGVEVPTCNSPSSVAEVE-SG 146
Query: 142 LSEVSCGLTVEDVGEQVEGDMDSSS 166
S SCGL + + ++ D +S S
Sbjct: 147 YS--SCGLP--ECEDDIDPDFESMS 167
Score = 53 (23.7 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 377 CRICGM--DGTLLCCDGCPSAYHTRCIG-VSKMYVPEGSWYCPEC 418
C+IC G L C C H+ C + GSW C C
Sbjct: 1518 CQICKHVEPGPDLTCQTCNMTIHSHCSPWEEESTCIGGSWRCGRC 1562
Score = 48 (22.0 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 377 CRICGMD---G-TLLCCDGCPSAYHTRCIGVSKMYVPEGSWY-CPEC 418
C IC + G T + C C YH + + + +PE + C C
Sbjct: 1245 CWICKLPYNPGLTYIHCTSCDMWYHIEAVKLEESKIPEVVGFKCCRC 1291
Score = 42 (19.8 bits), Expect = 1.8e-148, Sum P(2) = 1.8e-148
Identities = 7/30 (23%), Positives = 20/30 (66%)
Query: 114 RSLKNEKSNLEKKDGDAKSEVDRIEASTLS 143
R+++ + S+++K+ GD S++ +++ S
Sbjct: 554 RTVETDLSHMQKEGGDEVSDIGEPDSANSS 583
>UNIPROTKB|F5GXF5 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00911006 Ensembl:ENST00000544778
UCSC:uc010wqm.1 ArrayExpress:F5GXF5 Uniprot:F5GXF5
Length = 2457
Score = 134 (52.2 bits), Expect = 2.5e-09, Sum P(6) = 2.5e-09
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 391 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 450
Query: 435 GA------ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLSS 486
E G D R + L++ + N E+ I YY+ + + +++ L
Sbjct: 451 KNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCLDKD 510
Query: 487 VQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQR 543
L CK IL ++ E + M + + N A+ K + + I ES R
Sbjct: 511 YWEAEL----CK-ILE--EMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIR 561
Score = 92 (37.4 bits), Expect = 2.5e-09, Sum P(6) = 2.5e-09
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1779 SKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1838
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + +RW ++
Sbjct: 1839 SLAGVSLMLRLLWASLRWDDM 1859
Score = 60 (26.2 bits), Expect = 2.5e-09, Sum P(6) = 2.5e-09
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 74 EDGDCEDL-DSSELRQFLLNENDFDADLTRRRKKLDD---WLVKRSLKNEKSNLEKKDGD 129
EDGD E+ DS + + + E+D D+D + DD + + S ++ S G
Sbjct: 148 EDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDASYCTESSFRSH-STYSSTPGR 206
Query: 130 AKSEVDRIEASTLSE 144
K V R + L E
Sbjct: 207 RKPRVHRPRSPILEE 221
Score = 54 (24.1 bits), Expect = 2.5e-09, Sum P(6) = 2.5e-09
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 827 KWNGSVHGSKVLTISTLRLTITQLENNIPSSFLHPNWASHRANWI 871
Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(6) = 1.1e-08
Identities = 29/114 (25%), Positives = 47/114 (41%)
Query: 849 SYRKKWRKQVAEACTLNSIKALLLELEENICHIALSGDWVKLMDDWLGDSSVIQSASCNF 908
SY+KK + + IK LE ++ + I L G +K + +SS S S
Sbjct: 1113 SYKKKTKSSKLDGLLERRIKQFTLEEKQRLEKIKLEGG-IKGIGKTSTNSSKNLSES-PV 1170
Query: 909 VTTQKRGLSGKRGRKHSVISEVTADDCNDQSFSWWQG-GKSTKLISKKAILPHT 961
+T K G + S+ E + + NDQ QG +S + + + HT
Sbjct: 1171 ITKAKEGC-----QSDSMRQEQSPNANNDQPEDLIQGCSESDSSVLRMSDPSHT 1219
Score = 45 (20.9 bits), Expect = 2.5e-09, Sum P(6) = 2.5e-09
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKAS 1135
W E L L+ I+ + ERV+ A + ++ + + E QK + A+
Sbjct: 1949 WVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPTVIAT 1993
Score = 44 (20.5 bits), Expect = 2.5e-09, Sum P(6) = 2.5e-09
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + K+ +LQ L D L +
Sbjct: 321 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVE--NKIKVLQFLVDQFLTTN 375
Query: 291 ELRAEI 296
R E+
Sbjct: 376 IAREEL 381
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 1103 KEYEERVDMVIA----PSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKCA 1154
KEY R + + P + L ++K K+S+K +F V D ++K A
Sbjct: 1743 KEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFVTKSSKKSIF---VLPNDDLKKLA 1795
Score = 37 (18.1 bits), Expect = 9.2e-08, Sum P(6) = 9.2e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 763 PCSERKLWEVPRERCS 778
P ++KL E P +CS
Sbjct: 1424 PSQQKKLEERPVNKCS 1439
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 189 (71.6 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 57/196 (29%), Positives = 84/196 (42%)
Query: 305 GLDPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMD 364
G+ D S ++R +H SK+ C+ + + + ++ +A + T +
Sbjct: 556 GIHCDCCSKILTVSRFEIHAG-SKS--CQPFQNIYLESGASLLQCQVRAWNMQKDATNLA 612
Query: 365 APGVDVDG---NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAIN 421
VD DG N D C ICG G L+CCDGCPS YH C+G+ + P G W+CP C
Sbjct: 613 LHQVDTDGDDPNDDACGICGDGGDLICCDGCPSTYHQNCLGMQVL--PSGDWHCPNCTCK 670
Query: 422 KVGPIVTIGTSLRG-AELFGIDLYERVFLGTCNHLLVLNASSNTEQYIRYYNPIDIPKVL 480
V G L + ER + H L LN ++ Q + PK L
Sbjct: 671 FCDAAVASGGKDGNFISLLSCGMCERRY-----HQLCLNDEAHKVQSFGSASSFCGPKCL 725
Query: 481 QALLSSVQHVSLYLGI 496
+ L +Q YLG+
Sbjct: 726 E-LFEKLQK---YLGV 737
Score = 46 (21.3 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 112 VKRSLKNEKSNLEKKDGDAKSEVDRI--EASTLSEVSCGLTVE-DVGEQVEGDMDSSSDS 168
V + ++E+S++ +K KSE + E +T S+ + V DV E+ G +D
Sbjct: 253 VDNNSESEESDMSRKSKRKKSEYSKPKKEFNTKSKSTFPELVNPDVREERRGRRGGGTDK 312
Query: 169 CEHVRETDAGL 179
+ +RE G+
Sbjct: 313 -QRLRERIKGM 322
Score = 42 (19.8 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 921 GRKHSVISEVTADDCNDQSFSWWQGGKSTKLISKKAILPHTIIRNAARRGGLRKISGVNY 980
G S+I V D + S + ++KL AI+ + RR G+ I V Y
Sbjct: 744 GYSWSLIHRVDTDSDTNSQMSAQRIENNSKLAVGLAIMDECFLPIVDRRSGVDLIRNVLY 803
Score = 39 (18.8 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 693 MGSVFKPHSYINQYMHGE 710
MG++ KP ++++ GE
Sbjct: 996 MGTICKPKDELSRHFRGE 1013
>UNIPROTKB|E7ETD6 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00024532 ProteinModelPortal:E7ETD6
Ensembl:ENST00000424123 ArrayExpress:E7ETD6 Uniprot:E7ETD6
Length = 2764
Score = 134 (52.2 bits), Expect = 4.6e-09, Sum P(6) = 4.6e-09
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 252 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 311
Query: 435 GA------ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLSS 486
E G D R + L++ + N E+ I YY+ + + +++ L
Sbjct: 312 KNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCLDKD 371
Query: 487 VQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQR 543
L CK IL ++ E + M + + N A+ K + + I ES R
Sbjct: 372 YWEAEL----CK-ILE--EMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIR 422
Score = 92 (37.4 bits), Expect = 4.6e-09, Sum P(6) = 4.6e-09
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1703 SKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1762
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + +RW ++
Sbjct: 1763 SLAGVSLMLRLLWASLRWDDM 1783
Score = 60 (26.2 bits), Expect = 4.6e-09, Sum P(6) = 4.6e-09
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 74 EDGDCEDL-DSSELRQFLLNENDFDADLTRRRKKLDD---WLVKRSLKNEKSNLEKKDGD 129
EDGD E+ DS + + + E+D D+D + DD + + S ++ S G
Sbjct: 9 EDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDASYCTESSFRSH-STYSSTPGR 67
Query: 130 AKSEVDRIEASTLSE 144
K V R + L E
Sbjct: 68 RKPRVHRPRSPILEE 82
Score = 54 (24.1 bits), Expect = 4.6e-09, Sum P(6) = 4.6e-09
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 751 KWNGSVHGSKVLTISTLRLTITQLENNIPSSFLHPNWASHRANWI 795
Score = 47 (21.6 bits), Expect = 2.1e-08, Sum P(6) = 2.1e-08
Identities = 29/114 (25%), Positives = 47/114 (41%)
Query: 849 SYRKKWRKQVAEACTLNSIKALLLELEENICHIALSGDWVKLMDDWLGDSSVIQSASCNF 908
SY+KK + + IK LE ++ + I L G +K + +SS S S
Sbjct: 1037 SYKKKTKSSKLDGLLERRIKQFTLEEKQRLEKIKLEGG-IKGIGKTSTNSSKNLSES-PV 1094
Query: 909 VTTQKRGLSGKRGRKHSVISEVTADDCNDQSFSWWQG-GKSTKLISKKAILPHT 961
+T K G + S+ E + + NDQ QG +S + + + HT
Sbjct: 1095 ITKAKEGC-----QSDSMRQEQSPNANNDQPEDLIQGCSESDSSVLRMSDPSHT 1143
Score = 45 (20.9 bits), Expect = 4.6e-09, Sum P(6) = 4.6e-09
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKAS 1135
W E L L+ I+ + ERV+ A + ++ + + E QK + A+
Sbjct: 1873 WVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPTVIAT 1917
Score = 44 (20.5 bits), Expect = 4.6e-09, Sum P(6) = 4.6e-09
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + K+ +LQ L D L +
Sbjct: 182 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVE--NKIKVLQFLVDQFLTTN 236
Query: 291 ELRAEI 296
R E+
Sbjct: 237 IAREEL 242
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(5) = 0.00026
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 1103 KEYEERVDMVIA----PSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKCA 1154
KEY R + + P + L ++K K+S+K +F V D ++K A
Sbjct: 1667 KEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFVTKSSKKSIF---VLPNDDLKKLA 1719
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(6) = 1.8e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 763 PCSERKLWEVPRERCS 778
P ++KL E P +CS
Sbjct: 1348 PSQQKKLEERPVNKCS 1363
>UNIPROTKB|Q12830 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016589
"NURF complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007420 "brain development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0005737
GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0008134 GO:GO:0007492 GO:GO:0001892
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 EMBL:AB032251 EMBL:AC006534 EMBL:AC107377
EMBL:AC134407 EMBL:U05237 EMBL:AY282495 EMBL:BC067234
IPI:IPI00254408 IPI:IPI00376404 IPI:IPI00785110 PIR:G01252
RefSeq:NP_004450.3 RefSeq:NP_872579.2 UniGene:Hs.444200 PDB:2F6J
PDB:2F6N PDB:2FSA PDB:2FUI PDB:2FUU PDB:2RI7 PDB:3QZS PDB:3QZT
PDB:3QZV PDB:3UV2 PDBsum:2F6J PDBsum:2F6N PDBsum:2FSA PDBsum:2FUI
PDBsum:2FUU PDBsum:2RI7 PDBsum:3QZS PDBsum:3QZT PDBsum:3QZV
PDBsum:3UV2 ProteinModelPortal:Q12830 SMR:Q12830 IntAct:Q12830
STRING:Q12830 PhosphoSite:Q12830 DMDM:215274183 PaxDb:Q12830
PRIDE:Q12830 Ensembl:ENST00000306378 Ensembl:ENST00000321892
Ensembl:ENST00000335221 Ensembl:ENST00000571054
Ensembl:ENST00000573834 Ensembl:ENST00000576412 GeneID:2186
KEGG:hsa:2186 UCSC:uc002jge.3 UCSC:uc002jgf.3 CTD:2186
GeneCards:GC17P065821 HGNC:HGNC:3581 HPA:HPA029069 MIM:601819
neXtProt:NX_Q12830 PharmGKB:PA162377557 HOGENOM:HOG000231041
HOVERGEN:HBG080062 KO:K11728 OMA:DVIMEDF ChiTaRS:BPTF
EvolutionaryTrace:Q12830 GenomeRNAi:2186 NextBio:8831
ArrayExpress:Q12830 Bgee:Q12830 CleanEx:HS_BPTF
Genevestigator:Q12830 GermOnline:ENSG00000171634 Uniprot:Q12830
Length = 3046
Score = 134 (52.2 bits), Expect = 7.9e-09, Sum P(6) = 7.9e-09
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 391 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 450
Query: 435 GA------ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLSS 486
E G D R + L++ + N E+ I YY+ + + +++ L
Sbjct: 451 KNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCLDKD 510
Query: 487 VQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQR 543
L CK IL ++ E + M + + N A+ K + + I ES R
Sbjct: 511 YWEAEL----CK-ILE--EMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIR 561
Score = 92 (37.4 bits), Expect = 7.9e-09, Sum P(6) = 7.9e-09
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1842 SKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1901
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + +RW ++
Sbjct: 1902 SLAGVSLMLRLLWASLRWDDM 1922
Score = 60 (26.2 bits), Expect = 7.9e-09, Sum P(6) = 7.9e-09
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 74 EDGDCEDL-DSSELRQFLLNENDFDADLTRRRKKLDD---WLVKRSLKNEKSNLEKKDGD 129
EDGD E+ DS + + + E+D D+D + DD + + S ++ S G
Sbjct: 148 EDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDASYCTESSFRSH-STYSSTPGR 206
Query: 130 AKSEVDRIEASTLSE 144
K V R + L E
Sbjct: 207 RKPRVHRPRSPILEE 221
Score = 54 (24.1 bits), Expect = 7.9e-09, Sum P(6) = 7.9e-09
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 890 KWNGSVHGSKVLTISTLRLTITQLENNIPSSFLHPNWASHRANWI 934
Score = 47 (21.6 bits), Expect = 3.6e-08, Sum P(6) = 3.6e-08
Identities = 29/114 (25%), Positives = 47/114 (41%)
Query: 849 SYRKKWRKQVAEACTLNSIKALLLELEENICHIALSGDWVKLMDDWLGDSSVIQSASCNF 908
SY+KK + + IK LE ++ + I L G +K + +SS S S
Sbjct: 1176 SYKKKTKSSKLDGLLERRIKQFTLEEKQRLEKIKLEGG-IKGIGKTSTNSSKNLSES-PV 1233
Query: 909 VTTQKRGLSGKRGRKHSVISEVTADDCNDQSFSWWQG-GKSTKLISKKAILPHT 961
+T K G + S+ E + + NDQ QG +S + + + HT
Sbjct: 1234 ITKAKEGC-----QSDSMRQEQSPNANNDQPEDLIQGCSESDSSVLRMSDPSHT 1282
Score = 45 (20.9 bits), Expect = 7.9e-09, Sum P(6) = 7.9e-09
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKAS 1135
W E L L+ I+ + ERV+ A + ++ + + E QK + A+
Sbjct: 2012 WVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPTVIAT 2056
Score = 44 (20.5 bits), Expect = 7.9e-09, Sum P(6) = 7.9e-09
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + K+ +LQ L D L +
Sbjct: 321 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVE--NKIKVLQFLVDQFLTTN 375
Query: 291 ELRAEI 296
R E+
Sbjct: 376 IAREEL 381
Score = 43 (20.2 bits), Expect = 0.00041, Sum P(5) = 0.00041
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 1103 KEYEERVDMVIA----PSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKCA 1154
KEY R + + P + L ++K K+S+K +F V D ++K A
Sbjct: 1806 KEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFVTKSSKKSIF---VLPNDDLKKLA 1858
Score = 37 (18.1 bits), Expect = 3.1e-07, Sum P(6) = 3.1e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 763 PCSERKLWEVPRERCS 778
P ++KL E P +CS
Sbjct: 1487 PSQQKKLEERPVNKCS 1502
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 143 (55.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/113 (30%), Positives = 56/113 (49%)
Query: 307 DPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAP 366
DP +A A++R +F P N + + + + K K KP G +++
Sbjct: 9 DPGSAE---RTAQKR---KFPSPPHSSNGHSPQDTSTSPIKK---KKKP-GL----LNSN 54
Query: 367 GVDVDGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
+ DG D C +C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 55 NKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 105
>UNIPROTKB|E1C5C7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00594126 Ensembl:ENSGALT00000005744
ArrayExpress:E1C5C7 Uniprot:E1C5C7
Length = 2789
Score = 136 (52.9 bits), Expect = 1.7e-08, Sum P(6) = 1.7e-08
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 251 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 310
Query: 435 GA------ELFGIDLYERVFLGTCNHLLVLNASSNTEQ--YIRYYNP-IDIPKVLQAL 483
E G D + R + N +++ S +E+ + YY+ I + ++++ L
Sbjct: 311 KNKPYIRHEPIGYDRHRRKYW-FLNRRIIIEEDSESEKDKKVWYYSTKIQLAELIECL 367
Score = 90 (36.7 bits), Expect = 1.7e-08, Sum P(6) = 1.7e-08
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ ARRGG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1722 SKKSIFVLPNDDLKKLARRGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1781
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + ++W ++
Sbjct: 1782 SLAGVSLMLRLLWACLKWDDM 1802
Score = 58 (25.5 bits), Expect = 1.7e-08, Sum P(6) = 1.7e-08
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ +++LE NI L +W +W+
Sbjct: 748 KWNGSVHGSKVLTISTLRLTIIQLENNIPASFLHPNWASHRSNWI 792
Score = 49 (22.3 bits), Expect = 1.7e-08, Sum P(6) = 1.7e-08
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 77 DCEDLDSSELRQFLLNENDFDADLTRRRKKLDD--WLVKRSLKNEKSNLEKKDGDAKSEV 134
D +D + E + + E+D D+D + DD + + S ++ S G + V
Sbjct: 13 DNQDSEEEEEEEIMEEEDDDDSDYPEEMEDEDDASYCTESSFRSH-STYSSTPGRRRQRV 71
Query: 135 DRIEASTLSE 144
R + L E
Sbjct: 72 HRPRSPILEE 81
Score = 46 (21.3 bits), Expect = 1.7e-08, Sum P(6) = 1.7e-08
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQL 1132
W E L L+ I+ + ERV+ A + ++ + + E Q+KQ+
Sbjct: 1892 WVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLE-QQKQI 1932
Score = 45 (20.9 bits), Expect = 0.00050, Sum P(5) = 0.00050
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 1103 KEY--EERVDMV--IAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKCA 1154
KEY +++V ++ P + L ++K K+S+K +F V D ++K A
Sbjct: 1686 KEYSTKDKVKLMKFTKPKKTRSGTALPSYRKFVTKSSKKSIF---VLPNDDLKKLA 1738
Score = 44 (20.5 bits), Expect = 1.7e-08, Sum P(6) = 1.7e-08
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + K+ +LQ L D L +
Sbjct: 181 IDGMTWPEVLRVYCESD---KEYHHVLPYQETEDYPYGPVE--NKIKVLQFLVDQFLTTN 235
Query: 291 ELRAEI 296
R E+
Sbjct: 236 IAREEL 241
>UNIPROTKB|E1C5C8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 OMA:DVIMEDF GO:GO:0008094
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00601232 Ensembl:ENSGALT00000005741
ArrayExpress:E1C5C8 Uniprot:E1C5C8
Length = 2802
Score = 136 (52.9 bits), Expect = 1.8e-08, Sum P(6) = 1.8e-08
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 251 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 310
Query: 435 GA------ELFGIDLYERVFLGTCNHLLVLNASSNTEQ--YIRYYNP-IDIPKVLQAL 483
E G D + R + N +++ S +E+ + YY+ I + ++++ L
Sbjct: 311 KNKPYIRHEPIGYDRHRRKYW-FLNRRIIIEEDSESEKDKKVWYYSTKIQLAELIECL 367
Score = 90 (36.7 bits), Expect = 1.8e-08, Sum P(6) = 1.8e-08
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ ARRGG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1592 SKKSIFVLPNDDLKKLARRGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1651
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + ++W ++
Sbjct: 1652 SLAGVSLMLRLLWACLKWDDM 1672
Score = 58 (25.5 bits), Expect = 1.8e-08, Sum P(6) = 1.8e-08
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ +++LE NI L +W +W+
Sbjct: 618 KWNGSVHGSKVLTISTLRLTIIQLENNIPASFLHPNWASHRSNWI 662
Score = 49 (22.3 bits), Expect = 1.8e-08, Sum P(6) = 1.8e-08
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 77 DCEDLDSSELRQFLLNENDFDADLTRRRKKLDD--WLVKRSLKNEKSNLEKKDGDAKSEV 134
D +D + E + + E+D D+D + DD + + S ++ S G + V
Sbjct: 13 DNQDSEEEEEEEIMEEEDDDDSDYPEEMEDEDDASYCTESSFRSH-STYSSTPGRRRQRV 71
Query: 135 DRIEASTLSE 144
R + L E
Sbjct: 72 HRPRSPILEE 81
Score = 46 (21.3 bits), Expect = 1.8e-08, Sum P(6) = 1.8e-08
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQL 1132
W E L L+ I+ + ERV+ A + ++ + + E Q+KQ+
Sbjct: 1762 WVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLE-QQKQI 1802
Score = 45 (20.9 bits), Expect = 0.00051, Sum P(5) = 0.00051
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 1103 KEY--EERVDMV--IAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKCA 1154
KEY +++V ++ P + L ++K K+S+K +F V D ++K A
Sbjct: 1556 KEYSTKDKVKLMKFTKPKKTRSGTALPSYRKFVTKSSKKSIF---VLPNDDLKKLA 1608
Score = 44 (20.5 bits), Expect = 1.8e-08, Sum P(6) = 1.8e-08
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + K+ +LQ L D L +
Sbjct: 181 IDGMTWPEVLRVYCESD---KEYHHVLPYQETEDYPYGPVE--NKIKVLQFLVDQFLTTN 235
Query: 291 ELRAEI 296
R E+
Sbjct: 236 IAREEL 241
>UNIPROTKB|F1LX76 [details] [associations]
symbol:F1LX76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00361297 Ensembl:ENSRNOT00000020904 ArrayExpress:F1LX76
Uniprot:F1LX76
Length = 2894
Score = 138 (53.6 bits), Expect = 2.6e-08, Sum P(6) = 2.6e-08
Identities = 48/180 (26%), Positives = 76/180 (42%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVT--IGTS 432
D CR+C G LLCC+ C + YH C+ VPE W C C +KV P VT +
Sbjct: 369 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKV-PGVTDCVAEV 427
Query: 433 LRGA-----ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLS 485
+ E G D R + L++ + N E+ + YY+ + + +++ L
Sbjct: 428 QKNKPYVRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKVWYYSTKVQLAELIDCLDK 487
Query: 486 SVQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQRI 544
L C+ +L DI E + M + + N A+ K + + I +S RI
Sbjct: 488 DYWEAEL----CR-VLE--DIREEMQQHMDVTEDLTNKARGSNKSFLAAANEEILDSLRI 540
Score = 92 (37.4 bits), Expect = 2.6e-08, Sum P(6) = 2.6e-08
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1694 SKKSIFVLPNDDLKKLARKGGIREVPCFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1753
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + +RW ++
Sbjct: 1754 SLAGVSLMLRLLWASLRWDDM 1774
Score = 54 (24.1 bits), Expect = 2.6e-08, Sum P(6) = 2.6e-08
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 743 KWNGSVHGSKVLTISTLRLTITQLESNIPSSFLHPNWASHRANWI 787
Score = 48 (22.0 bits), Expect = 2.6e-08, Sum P(6) = 2.6e-08
Identities = 21/74 (28%), Positives = 30/74 (40%)
Query: 74 EDGDCEDLDSSELRQFLLNENDFDADLTRRRKKLDDW---LVKRSLKNEKSNLEKKDGDA 130
EDGD E+ SE + + ND D+ R+ D+ K S K+ + G
Sbjct: 127 EDGDAEETQDSEDDKNMTC-NDHDSYYPEEREDADEDGRDCKKSSFKSPYTFSSTPGGRR 185
Query: 131 KSEVDRIEASTLSE 144
K V R + L E
Sbjct: 186 KPRVHRPRSPILEE 199
Score = 45 (20.9 bits), Expect = 2.6e-08, Sum P(6) = 2.6e-08
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKAS 1135
W E L L+ I+ + ERV+ A + ++ + + E QK + A+
Sbjct: 1864 WVAEEELELWEIRAFAERVEKEKAQAVEQQTKKRLEQQKPAVIAA 1908
Score = 45 (20.9 bits), Expect = 2.6e-08, Sum P(6) = 2.6e-08
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + + K+ +LQ L D L +
Sbjct: 299 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVES--KIKVLQFLVDQFLTTN 353
Query: 291 ELRAEI 296
R E+
Sbjct: 354 IAREEL 359
Score = 42 (19.8 bits), Expect = 9.4e-08, Sum P(6) = 9.4e-08
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 129 DAKSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDS 168
D +SE D E +SE ED E+ +GD + + DS
Sbjct: 105 DHESEDDDEEEDMVSE-------EDEEEEEDGDAEETQDS 137
Score = 41 (19.5 bits), Expect = 4.3e-07, Sum P(6) = 4.3e-07
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 616 STGSVSQQADPS---DVTYQSLVDRSSAIDFMTCTSQISNDGNSGHASSCLSPNIS 668
+T +V++ + PS DV S+ ++S + T T +S G++ S +S S
Sbjct: 1606 TTTTVTKLSTPSPDSDVDTVSVKEQSKTVVTTTVTDSLSTAGSTLVTSMTVSREYS 1661
Score = 40 (19.1 bits), Expect = 7.6e-08, Sum P(6) = 7.6e-08
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELS 1125
K E++ VIA S+ P+N S
Sbjct: 1896 KRLEQQKPAVIAASTTSPTNSTS 1918
Score = 38 (18.4 bits), Expect = 2.2e-07, Sum P(6) = 2.2e-07
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 113 KRSLKNEKSNLEKKDGDAKSEVD 135
+ + +E+ E++DGDA+ D
Sbjct: 114 EEDMVSEEDEEEEEDGDAEETQD 136
Score = 38 (18.4 bits), Expect = 2.2e-07, Sum P(6) = 2.2e-07
Identities = 17/64 (26%), Positives = 27/64 (42%)
Query: 70 RVDYEDGDCEDLDSSE-LRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNL---EK 125
+V Y+D + ED D E + E + D D + DD K N+ + E+
Sbjct: 100 KVVYDDHESEDDDEEEDMVSEEDEEEEEDGDAEETQDSEDD---KNMTCNDHDSYYPEER 156
Query: 126 KDGD 129
+D D
Sbjct: 157 EDAD 160
>UNIPROTKB|F1M1V5 [details] [associations]
symbol:F1M1V5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00782357 Ensembl:ENSRNOT00000055099 ArrayExpress:F1M1V5
Uniprot:F1M1V5
Length = 2952
Score = 138 (53.6 bits), Expect = 2.9e-08, Sum P(6) = 2.9e-08
Identities = 48/180 (26%), Positives = 76/180 (42%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVT--IGTS 432
D CR+C G LLCC+ C + YH C+ VPE W C C +KV P VT +
Sbjct: 369 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKV-PGVTDCVAEV 427
Query: 433 LRGA-----ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLS 485
+ E G D R + L++ + N E+ + YY+ + + +++ L
Sbjct: 428 QKNKPYVRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKVWYYSTKVQLAELIDCLDK 487
Query: 486 SVQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQRI 544
L C+ +L DI E + M + + N A+ K + + I +S RI
Sbjct: 488 DYWEAEL----CR-VLE--DIREEMQQHMDVTEDLTNKARGSNKSFLAAANEEILDSLRI 540
Score = 92 (37.4 bits), Expect = 2.9e-08, Sum P(6) = 2.9e-08
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1752 SKKSIFVLPNDDLKKLARKGGIREVPCFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1811
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + +RW ++
Sbjct: 1812 SLAGVSLMLRLLWASLRWDDM 1832
Score = 54 (24.1 bits), Expect = 2.9e-08, Sum P(6) = 2.9e-08
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 809 KWNGSVHGSKVLTISTLRLTITQLESNIPSSFLHPNWASHRANWI 853
Score = 48 (22.0 bits), Expect = 2.9e-08, Sum P(6) = 2.9e-08
Identities = 21/74 (28%), Positives = 30/74 (40%)
Query: 74 EDGDCEDLDSSELRQFLLNENDFDADLTRRRKKLDDW---LVKRSLKNEKSNLEKKDGDA 130
EDGD E+ SE + + ND D+ R+ D+ K S K+ + G
Sbjct: 127 EDGDAEETQDSEDDKNMTC-NDHDSYYPEEREDADEDGRDCKKSSFKSPYTFSSTPGGRR 185
Query: 131 KSEVDRIEASTLSE 144
K V R + L E
Sbjct: 186 KPRVHRPRSPILEE 199
Score = 45 (20.9 bits), Expect = 2.9e-08, Sum P(6) = 2.9e-08
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKAS 1135
W E L L+ I+ + ERV+ A + ++ + + E QK + A+
Sbjct: 1922 WVAEEELELWEIRAFAERVEKEKAQAVEQQTKKRLEQQKPAVIAA 1966
Score = 45 (20.9 bits), Expect = 2.9e-08, Sum P(6) = 2.9e-08
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + + K+ +LQ L D L +
Sbjct: 299 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVES--KIKVLQFLVDQFLTTN 353
Query: 291 ELRAEI 296
R E+
Sbjct: 354 IAREEL 359
Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(6) = 1.1e-07
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 129 DAKSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDS 168
D +SE D E +SE ED E+ +GD + + DS
Sbjct: 105 DHESEDDDEEEDMVSE-------EDEEEEEDGDAEETQDS 137
Score = 41 (19.5 bits), Expect = 4.8e-07, Sum P(6) = 4.8e-07
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 616 STGSVSQQADPS---DVTYQSLVDRSSAIDFMTCTSQISNDGNSGHASSCLSPNIS 668
+T +V++ + PS DV S+ ++S + T T +S G++ S +S S
Sbjct: 1664 TTTTVTKLSTPSPDSDVDTVSVKEQSKTVVTTTVTDSLSTAGSTLVTSMTVSREYS 1719
Score = 40 (19.1 bits), Expect = 8.5e-08, Sum P(6) = 8.5e-08
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELS 1125
K E++ VIA S+ P+N S
Sbjct: 1954 KRLEQQKPAVIAASTTSPTNSTS 1976
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(6) = 2.5e-07
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 113 KRSLKNEKSNLEKKDGDAKSEVD 135
+ + +E+ E++DGDA+ D
Sbjct: 114 EEDMVSEEDEEEEEDGDAEETQD 136
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(6) = 2.5e-07
Identities = 17/64 (26%), Positives = 27/64 (42%)
Query: 70 RVDYEDGDCEDLDSSE-LRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNL---EK 125
+V Y+D + ED D E + E + D D + DD K N+ + E+
Sbjct: 100 KVVYDDHESEDDDEEEDMVSEEDEEEEEDGDAEETQDSEDD---KNMTCNDHDSYYPEER 156
Query: 126 KDGD 129
+D D
Sbjct: 157 EDAD 160
>FB|FBgn0000541 [details] [associations]
symbol:E(bx) "Enhancer of bithorax" species:7227 "Drosophila
melanogaster" [GO:0042766 "nucleosome mobilization"
evidence=IDA;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016589 "NURF complex" evidence=NAS;IDA;TAS]
[GO:0006334 "nucleosome assembly" evidence=NAS] [GO:0030097
"hemopoiesis" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0035073
"pupariation" evidence=IMP] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IPI] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IGI;IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 SMART:SM00384 GO:GO:0007095 EMBL:AE014296
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045747 GO:GO:0006351 GO:GO:0048813 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0030097
GO:GO:0046331 GO:GO:0035073 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0035076 GO:GO:0042766 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 KO:K11728 OMA:DVIMEDF
GeneTree:ENSGT00660000095339 EMBL:AF417921 EMBL:AY051776
EMBL:BT023142 EMBL:BT022131 RefSeq:NP_001163304.1
RefSeq:NP_728505.1 RefSeq:NP_728507.1 RefSeq:NP_995946.1
UniGene:Dm.1449 HSSP:Q80TJ7 ProteinModelPortal:Q9W0T1 SMR:Q9W0T1
IntAct:Q9W0T1 MINT:MINT-1583525 STRING:Q9W0T1 PaxDb:Q9W0T1
EnsemblMetazoa:FBtr0072521 EnsemblMetazoa:FBtr0301348
EnsemblMetazoa:FBtr0332104 GeneID:44811 KEGG:dme:Dmel_CG32346
CTD:44811 FlyBase:FBgn0000541 InParanoid:Q9W0T1 OrthoDB:EOG466T1P
PhylomeDB:Q9W0T1 ChiTaRS:E(bx) GenomeRNAi:44811 NextBio:837653
Bgee:Q9W0T1 GermOnline:CG32346 Uniprot:Q9W0T1
Length = 2669
Score = 132 (51.5 bits), Expect = 3.0e-08, Sum P(5) = 3.0e-08
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIV 427
D CR+C G LLCC+ CP+ YH C+ VP W C C +KV +V
Sbjct: 340 DHCRVCHRLGDLLCCETCPAVYHLECVDPPMNDVPTEDWQCGLCRSHKVSGVV 392
Score = 70 (29.7 bits), Expect = 3.0e-08, Sum P(5) = 3.0e-08
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 957 ILPHTIIRNAARRGGLRKISGVNYTAE-----MPKRSRQLV---WRAAVERSKTVSQLAL 1008
+LP + AR GG +G ++ A+ + SR L W + ++S LAL
Sbjct: 1272 VLPRFELLKLARLGGKSSTNGFHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLSSLAL 1331
Query: 1009 QVRYIDLHVRWSELV-RPEQNLQDGK 1033
Q+R + +RW +++ +P DGK
Sbjct: 1332 QLRILWSCLRWDDMIAKPPST--DGK 1355
Score = 65 (27.9 bits), Expect = 3.0e-08, Sum P(5) = 3.0e-08
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 198 IALMRVLRRHLETLSSDGSELASNCLRCIDWSLLDTLTWPVYVVQYLTSMGYIKGTQWTG 257
I L++ + R + + L I L+D++TWP + Y+ S T
Sbjct: 236 IMLLKAILREEDAQGTHFGPLDQKDTVNISLYLIDSITWPEVLRSYVES----DKTFDRN 291
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELR 293
+ +S EY +L +LQ L D L S +R
Sbjct: 292 VFHILSHTEYPYTGIDNRLEVLQFLSDQFLTSNSIR 327
Score = 64 (27.6 bits), Expect = 3.0e-08, Sum P(5) = 3.0e-08
Identities = 24/82 (29%), Positives = 36/82 (43%)
Query: 581 VPFVQSNDITVTEKL---QDCLVLNGKLPGHVKMESAMSTGSVSQQADPSDVTYQSLVDR 637
VPF +D +TE + Q+C V N K+ V S +T S D + Y +D
Sbjct: 1065 VPF---SDSLLTECILVDQEC-VTNTKIKQEVNASSGCNTTPDSNTQDSDKIDYIESMDV 1120
Query: 638 SSAIDFMTCTSQISNDGNSGHA 659
S ++ + I NSG+A
Sbjct: 1121 CSNVEIESTEDSIVTGLNSGNA 1142
Score = 45 (20.9 bits), Expect = 3.0e-08, Sum P(5) = 3.0e-08
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 1117 SKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK---CACASCQIDVLLGNAV 1168
+++ S +LSEF K +R+ Y CR+ E C CQ D G V
Sbjct: 2472 TEEASKKLSEFICIDCKRARETQQLYCSCRQPYDESQFYICCDKCQ-DWFHGRCV 2525
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 946 GKSTKLISKKAILP----HTIIRNAARRGGLRKISGVNYTAEMPKRSRQLVWRAAVERSK 1001
G+ T + +K ++P T+ + R GLRK AE P+ + + V+ K
Sbjct: 1379 GEKTSYLRRKVVIPLEMPKTVREVTSIRSGLRK----RKRAESPQPTEPQITEEWVDEDK 1434
Score = 38 (18.4 bits), Expect = 8.8e-06, Sum P(5) = 8.8e-06
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 864 LNSIKALLLELEENICHIALSGDWVKLMDDW 894
+ +++ L+ E NI L+ +WV W
Sbjct: 616 ITTLRQTLINFESNIAASFLNINWVVNKKIW 646
>UNIPROTKB|F1M1V4 [details] [associations]
symbol:F1M1V4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0007420 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0007492
GO:GO:0001892 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 GO:GO:0008094 IPI:IPI00949885
Ensembl:ENSRNOT00000055100 ArrayExpress:F1M1V4 Uniprot:F1M1V4
Length = 3013
Score = 138 (53.6 bits), Expect = 3.2e-08, Sum P(6) = 3.2e-08
Identities = 48/180 (26%), Positives = 76/180 (42%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVT--IGTS 432
D CR+C G LLCC+ C + YH C+ VPE W C C +KV P VT +
Sbjct: 369 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKV-PGVTDCVAEV 427
Query: 433 LRGA-----ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLS 485
+ E G D R + L++ + N E+ + YY+ + + +++ L
Sbjct: 428 QKNKPYVRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKVWYYSTKVQLAELIDCLDK 487
Query: 486 SVQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQRI 544
L C+ +L DI E + M + + N A+ K + + I +S RI
Sbjct: 488 DYWEAEL----CR-VLE--DIREEMQQHMDVTEDLTNKARGSNKSFLAAANEEILDSLRI 540
Score = 92 (37.4 bits), Expect = 3.2e-08, Sum P(6) = 3.2e-08
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1813 SKKSIFVLPNDDLKKLARKGGIREVPCFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1872
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + +RW ++
Sbjct: 1873 SLAGVSLMLRLLWASLRWDDM 1893
Score = 54 (24.1 bits), Expect = 3.2e-08, Sum P(6) = 3.2e-08
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 870 KWNGSVHGSKVLTISTLRLTITQLESNIPSSFLHPNWASHRANWI 914
Score = 48 (22.0 bits), Expect = 3.2e-08, Sum P(6) = 3.2e-08
Identities = 21/74 (28%), Positives = 30/74 (40%)
Query: 74 EDGDCEDLDSSELRQFLLNENDFDADLTRRRKKLDDW---LVKRSLKNEKSNLEKKDGDA 130
EDGD E+ SE + + ND D+ R+ D+ K S K+ + G
Sbjct: 127 EDGDAEETQDSEDDKNMTC-NDHDSYYPEEREDADEDGRDCKKSSFKSPYTFSSTPGGRR 185
Query: 131 KSEVDRIEASTLSE 144
K V R + L E
Sbjct: 186 KPRVHRPRSPILEE 199
Score = 45 (20.9 bits), Expect = 3.2e-08, Sum P(6) = 3.2e-08
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKAS 1135
W E L L+ I+ + ERV+ A + ++ + + E QK + A+
Sbjct: 1983 WVAEEELELWEIRAFAERVEKEKAQAVEQQTKKRLEQQKPAVIAA 2027
Score = 45 (20.9 bits), Expect = 3.2e-08, Sum P(6) = 3.2e-08
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + + K+ +LQ L D L +
Sbjct: 299 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVES--KIKVLQFLVDQFLTTN 353
Query: 291 ELRAEI 296
R E+
Sbjct: 354 IAREEL 359
Score = 42 (19.8 bits), Expect = 1.2e-07, Sum P(6) = 1.2e-07
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 129 DAKSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDS 168
D +SE D E +SE ED E+ +GD + + DS
Sbjct: 105 DHESEDDDEEEDMVSE-------EDEEEEEDGDAEETQDS 137
Score = 41 (19.5 bits), Expect = 5.3e-07, Sum P(6) = 5.3e-07
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 616 STGSVSQQADPS---DVTYQSLVDRSSAIDFMTCTSQISNDGNSGHASSCLSPNIS 668
+T +V++ + PS DV S+ ++S + T T +S G++ S +S S
Sbjct: 1725 TTTTVTKLSTPSPDSDVDTVSVKEQSKTVVTTTVTDSLSTAGSTLVTSMTVSREYS 1780
Score = 40 (19.1 bits), Expect = 9.5e-08, Sum P(6) = 9.5e-08
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELS 1125
K E++ VIA S+ P+N S
Sbjct: 2015 KRLEQQKPAVIAASTTSPTNSTS 2037
Score = 38 (18.4 bits), Expect = 2.8e-07, Sum P(6) = 2.8e-07
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 113 KRSLKNEKSNLEKKDGDAKSEVD 135
+ + +E+ E++DGDA+ D
Sbjct: 114 EEDMVSEEDEEEEEDGDAEETQD 136
Score = 38 (18.4 bits), Expect = 2.8e-07, Sum P(6) = 2.8e-07
Identities = 17/64 (26%), Positives = 27/64 (42%)
Query: 70 RVDYEDGDCEDLDSSE-LRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNL---EK 125
+V Y+D + ED D E + E + D D + DD K N+ + E+
Sbjct: 100 KVVYDDHESEDDDEEEDMVSEEDEEEEEDGDAEETQDSEDD---KNMTCNDHDSYYPEER 156
Query: 126 KDGD 129
+D D
Sbjct: 157 EDAD 160
>UNIPROTKB|D5LMF5 [details] [associations]
symbol:zmynd8 "Zinc finger and MYND domain containing
protein 8" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0005634 GO:GO:0007399 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 CTD:23613 InterPro:IPR021931
Pfam:PF12064 EMBL:GU942747 RefSeq:NP_001170911.1 UniGene:Xl.18946
GeneID:733267 KEGG:xla:733267 Xenbase:XB-GENE-6253445
Uniprot:D5LMF5
Length = 1165
Score = 163 (62.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/100 (33%), Positives = 54/100 (54%)
Query: 324 PRFSKT-PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDV---DGNGD-ECR 378
P+ S T P K ++ + N+ N++ ++ + P + + VDV DG D C
Sbjct: 74 PQDSSTSPSKKKKKPIMINS-NNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCW 132
Query: 379 ICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
+C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 133 VCHREGQVLCCELCPRVYHAKCLKLTAE--PEGDWFCPEC 170
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 163 (62.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 26/50 (52%), Positives = 31/50 (62%)
Query: 369 DVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D D N D C +CG G L+CCD CPS +H C+ S +PEGSWYC C
Sbjct: 721 DDDPNDDSCGVCGDGGELICCDNCPSTFHQACL--SMQVLPEGSWYCSSC 768
>UNIPROTKB|F1PFZ4 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AAEX03006365 EMBL:AAEX03006366
Ensembl:ENSCAFT00000018361 Uniprot:F1PFZ4
Length = 2716
Score = 134 (52.2 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 191 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 250
Query: 435 GA------ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLSS 486
E G D R + L++ + N E+ I YY+ + + +++ L
Sbjct: 251 KNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCLDKD 310
Query: 487 VQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQR 543
L CK IL ++ E + M + + N A+ K + + I ES R
Sbjct: 311 YWEAEL----CK-ILE--EMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIR 361
Score = 92 (37.4 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1512 SKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1571
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + +RW ++
Sbjct: 1572 SLAGVSLMLRLLWASLRWDDM 1592
Score = 54 (24.1 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 565 KWNGSVHGSKVLTISTLRLTITQLENNIPSSFLHPNWASHRANWI 609
Score = 46 (21.3 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKAS 1135
W E L L+ I+ + ERV+ A + ++ + + E QK + A+
Sbjct: 1682 WVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPSVIAA 1726
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + K+ +LQ L D L +
Sbjct: 121 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVE--NKIKVLQFLVDQFLTTN 175
Query: 291 ELRAEI 296
R E+
Sbjct: 176 IAREEL 181
Score = 38 (18.4 bits), Expect = 4.0e-06, Sum P(5) = 4.0e-06
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 849 SYRKKWRKQVAEACTLNSIKALLLELEENICHIALSGDWVKLMDDWLGDSSVIQSASCNF 908
SY+KK + + +K LE ++ + + L G +K + SS+ + +
Sbjct: 851 SYKKKIKSSKLDGLLERRVKQFTLEEKQRLEKMKLEGG-IKGIGKTC-TSSLKSLSESSV 908
Query: 909 VTTQKRG 915
+T K G
Sbjct: 909 ITKAKEG 915
Score = 37 (18.1 bits), Expect = 8.6e-07, Sum P(5) = 8.6e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1103 KEYEERVDMVIAPSSKKPSN 1122
K E++ VIA S+ P+N
Sbjct: 1714 KRLEQQKPSVIAASTTSPTN 1733
>UNIPROTKB|J9JHE8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
OMA:DVIMEDF GeneTree:ENSGT00660000095339 EMBL:AAEX03006365
EMBL:AAEX03006366 Ensembl:ENSCAFT00000047847 Uniprot:J9JHE8
Length = 2842
Score = 134 (52.2 bits), Expect = 1.5e-07, Sum P(5) = 1.5e-07
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 191 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 250
Query: 435 GA------ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLSS 486
E G D R + L++ + N E+ I YY+ + + +++ L
Sbjct: 251 KNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCLDKD 310
Query: 487 VQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQR 543
L CK IL ++ E + M + + N A+ K + + I ES R
Sbjct: 311 YWEAEL----CK-ILE--EMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIR 361
Score = 92 (37.4 bits), Expect = 1.5e-07, Sum P(5) = 1.5e-07
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1638 SKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1697
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + +RW ++
Sbjct: 1698 SLAGVSLMLRLLWASLRWDDM 1718
Score = 54 (24.1 bits), Expect = 1.5e-07, Sum P(5) = 1.5e-07
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 691 KWNGSVHGSKVLTISTLRLTITQLENNIPSSFLHPNWASHRANWI 735
Score = 46 (21.3 bits), Expect = 1.5e-07, Sum P(5) = 1.5e-07
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKAS 1135
W E L L+ I+ + ERV+ A + ++ + + E QK + A+
Sbjct: 1808 WVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPSVIAA 1852
Score = 44 (20.5 bits), Expect = 1.5e-07, Sum P(5) = 1.5e-07
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + K+ +LQ L D L +
Sbjct: 121 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVE--NKIKVLQFLVDQFLTTN 175
Query: 291 ELRAEI 296
R E+
Sbjct: 176 IAREEL 181
Score = 38 (18.4 bits), Expect = 4.9e-06, Sum P(5) = 4.9e-06
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 849 SYRKKWRKQVAEACTLNSIKALLLELEENICHIALSGDWVKLMDDWLGDSSVIQSASCNF 908
SY+KK + + +K LE ++ + + L G +K + SS+ + +
Sbjct: 977 SYKKKIKSSKLDGLLERRVKQFTLEEKQRLEKMKLEGG-IKGIGKTC-TSSLKSLSESSV 1034
Query: 909 VTTQKRG 915
+T K G
Sbjct: 1035 ITKAKEG 1041
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1103 KEYEERVDMVIAPSSKKPSN 1122
K E++ VIA S+ P+N
Sbjct: 1840 KRLEQQKPSVIAASTTSPTN 1859
>UNIPROTKB|F1N3U7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 GO:GO:0045893 GO:GO:0007420 GO:GO:0009952
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0007492 GO:GO:0001892 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 OMA:DVIMEDF
GO:GO:0008094 GeneTree:ENSGT00660000095339 EMBL:DAAA02049354
IPI:IPI00698701 Ensembl:ENSBTAT00000019440 Uniprot:F1N3U7
Length = 2853
Score = 134 (52.2 bits), Expect = 1.9e-07, Sum P(5) = 1.9e-07
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 193 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 252
Query: 435 GA------ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLSS 486
E G D R + L++ + N E+ I YY+ + + +++ L
Sbjct: 253 KNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCLDKD 312
Query: 487 VQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQR 543
L CK IL ++ E + M + + N A+ K + + I ES R
Sbjct: 313 YWEAEL----CK-ILE--EMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIR 363
Score = 92 (37.4 bits), Expect = 1.9e-07, Sum P(5) = 1.9e-07
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1646 SKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1705
Query: 1002 TVSQLALQVRYIDLHVRWSEL 1022
+++ ++L +R + +RW ++
Sbjct: 1706 SLAGVSLMLRLLWASLRWDDM 1726
Score = 54 (24.1 bits), Expect = 1.9e-07, Sum P(5) = 1.9e-07
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 694 KWNGSVHGSKVLTISTLRLTITQLENNIPSSFLHPNWASHRANWI 738
Score = 49 (22.3 bits), Expect = 5.6e-07, Sum P(5) = 5.6e-07
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 884 SGDWVKLMDDWLGDSSVIQSASCNF---VTTQKRGLSGKRGRKHSVISEVTADDCNDQ 938
S D + + D D ++Q+++ + + TQ++G G K +S+ T C+D+
Sbjct: 1222 SSDTMSVQDSSEEDM-IVQNSNESISEQLITQEQGSEGFEPLKREFVSDKTTGSCDDR 1278
Score = 45 (20.9 bits), Expect = 1.9e-07, Sum P(5) = 1.9e-07
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 WFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLKAS 1135
W E L L+ I+ + ERV+ A + ++ + + E QK + A+
Sbjct: 1816 WVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPTVIAA 1860
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(5) = 1.9e-07
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + K+ +LQ L D L +
Sbjct: 123 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVE--NKIKVLQFLVDQFLTTN 177
Query: 291 ELRAEI 296
R E+
Sbjct: 178 IAREEL 183
Score = 41 (19.5 bits), Expect = 3.2e-06, Sum P(5) = 3.2e-06
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 575 TMSQTGVPFVQSNDITVTEKLQDCLVLNGKLPGHVKMESAMSTGSVSQQADPS---DVTY 631
T S+T + + + TV ++C K +T +V++ + PS DV
Sbjct: 1527 TESKTVIKVAKGDKQTVVSSTENC----------AKSTVTTTTTTVTKLSTPSAGSDVDI 1576
Query: 632 QSLVDRSSAIDFMTCTSQISNDGNSGHASSCLSPNISFLSK 672
S+ ++S + T T ++ G + S +S S K
Sbjct: 1577 ISVKEQSKTVVTTTVTDSLTTAGGTLVTSMTVSKEYSTRDK 1617
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1103 KEYEERVDMVIAPSSKKPSN 1122
K E++ VIA S+ P+N
Sbjct: 1848 KRLEQQKPTVIAASTTSPTN 1867
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 130 (50.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINK 422
N D C C G LLCCD CP+A+H +C +S+ +P G W C C + +
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N DEC +C G L+CCDGCP A+H C+ +P G+W C C
Sbjct: 88 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 149 (57.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 370 VDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKV 423
V+ N DEC +C G L+CCDGCP A+H C+ +P G+W C C N++
Sbjct: 290 VEHNDDECAVCKDGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLCQSNRL 343
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 149 (57.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 299 REESEVGLDPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGF 358
+E+ +GL+ D + R+ + K+ + V E + K + + L F
Sbjct: 186 QEKIRIGLNVDVIHEQQKKRRKMASEEIRRPKMVKSLKKVLQVMEKKQQKNKHEKESLRF 245
Query: 359 KGTEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
+ +P D N D C +C G LL CDGCPSA+H C+G+S + E W+CP C
Sbjct: 246 CRKDC-SP----DMNCDVCCVCHWGGDLLLCDGCPSAFHHACLGLSSL-PEEDLWFCPCC 299
Query: 419 AINKVGPIVTIGTSLRGAELFGIDLYERVFLGTC 452
+ G + + S +L + +R F TC
Sbjct: 300 CCDICGSMESPANS----KLMACEQCQRRFHLTC 329
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 149 (57.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N DEC +CG G L+CCDGCP A+H C+ VP G+W C C
Sbjct: 455 NEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSC 500
>ASPGD|ASPL0000065953 [details] [associations]
symbol:AN7300 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACD01000127 eggNOG:NOG145066
OrthoDB:EOG4N6053 RefSeq:XP_680569.1 ProteinModelPortal:Q5AWN0
EnsemblFungi:CADANIAT00000138 GeneID:2870174 KEGG:ani:AN7300.2
HOGENOM:HOG000168186 OMA:PPEGDWF Uniprot:Q5AWN0
Length = 841
Score = 151 (58.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINKVGPIVTIG 430
N D CR C G LLCCDGC +YH C+ + PEG W+CP+C+++K ++
Sbjct: 449 NNDFCRQCEKSGRLLCCDGCVYSYHFSCLNPPLDPANPPEGDWFCPKCSVSK-----SLN 503
Query: 431 TSLRGAE 437
T L G E
Sbjct: 504 TLLGGME 510
>ZFIN|ZDB-GENE-030131-2199 [details] [associations]
symbol:prkcbp1l "protein kinase C binding protein
1, like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2199
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX324190 IPI:IPI00611878
Ensembl:ENSDART00000124510 ArrayExpress:F1QYK7 Bgee:F1QYK7
Uniprot:F1QYK7
Length = 1131
Score = 161 (61.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 44/146 (30%), Positives = 68/146 (46%)
Query: 290 EELRAEIDAREESEVGLDPDAASYGSEIARRRVHPR------------FSKTPDCKNREA 337
EE++ E DA + EV + P A S ++R P S +P K ++
Sbjct: 9 EEVKTESDAVDGMEVSVPPKAVSDVESTEKKRKAPSPPHSSNGHSPSDTSPSPTKKKKKP 68
Query: 338 VEFNAENDRMKTSCKAKPLGF-KGTEMDAPGVDV---DGNGD-ECRICGMDGTLLCCDGC 392
N+ D+ + + P + K + VDV DG D C +C +G +LCC+ C
Sbjct: 69 GLVNSNKDQCEL--RHGPFYYVKQPALTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELC 126
Query: 393 PSAYHTRCIGVSKMYVPEGSWYCPEC 418
P YH +C+ ++ PEG W+CPEC
Sbjct: 127 PRVYHAKCLKLAAE--PEGDWFCPEC 150
Score = 44 (20.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 16/75 (21%), Positives = 30/75 (40%)
Query: 918 GKRGRKHSVISEVTADDCNDQSFSWWQGGKSTKLISKKAILPHTIIRNAARRGGLRKISG 977
GK SV + + D + S + ++ I A +P ++ + +S
Sbjct: 752 GKSSTSTSVSASPSTDTTSSSSSNPAPKDAASSAIKPPAAVPAPSTTQSSSSSAAQPVST 811
Query: 978 VNYTAEMPKRSRQLV 992
V TA + K+ R L+
Sbjct: 812 VPSTASVVKKQRPLL 826
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N DEC +C G L+CCDGCP A+H C+ +P G+W C C
Sbjct: 88 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 138 (53.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 346 RMKTSCKAKPLGFK----GTEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
R+K + + +P K G E D G + D + D C +C G ++ CD CP AYH C+
Sbjct: 353 RVKKNKRGRPAKKKKKALGDE-DGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCL 410
Query: 402 GVSKMYVPEGSWYCPEC 418
PEG W CP C
Sbjct: 411 EPELEKAPEGKWSCPHC 427
Score = 55 (24.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 80 DLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEA 139
D++ + +N + +D +KK K+ K +K E +D + +E
Sbjct: 106 DIERDSEPDYAMNSDSAASDYGGEKKKKKKHKDKKEKKTKKKKKEDEDSTHEETTKPVEM 165
Query: 140 STLSEVSCGLTVEDV 154
T ++++ +EDV
Sbjct: 166 KTSAQLAREWGLEDV 180
>UNIPROTKB|F1MY77 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:DAAA02036805
IPI:IPI00727342 UniGene:Bt.52435 Ensembl:ENSBTAT00000004258
NextBio:20867417 Uniprot:F1MY77
Length = 1193
Score = 155 (59.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 324 PRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDV---DGNGD-ECRI 379
P+ + T K ++ N++ ++ + P + + VDV DG D C +
Sbjct: 54 PQDTSTSPIKKKKKPGLLNNNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWV 113
Query: 380 CGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 114 CHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 150
Score = 49 (22.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 604 KLPGHVKMESAM--STGSVSQQADPSDV 629
KLP V+ + + ST S++ADPS V
Sbjct: 657 KLPNPVETKEELKGSTSPASEKADPSSV 684
Score = 37 (18.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 723 SSEESQASEMHKS----GNTRKAMSGSISLQAKAFSSTAS 758
+SEES + KS +T+ +GS+S K FS S
Sbjct: 481 ASEESM-DFLDKSTASPASTKTGQAGSLSGSPKPFSPQVS 519
Score = 37 (18.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 15/62 (24%), Positives = 25/62 (40%)
Query: 613 SAMSTGSVSQQADPSDVTYQSLVDRSSAIDFM---TCTSQISNDGNSGHASSC---LSPN 666
S++ TGS +Q T ++DF+ T + + G +G S SP
Sbjct: 458 SSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQ 517
Query: 667 IS 668
+S
Sbjct: 518 VS 519
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 157 (60.3 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 31/85 (36%), Positives = 42/85 (49%)
Query: 341 NAENDRM-KTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTR 399
N N R ++S K KP + D G + D + D C +C G ++ CD CP AYH
Sbjct: 320 NGSNSRSSRSSAKKKPKKKTKKDEDGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMV 378
Query: 400 CIGVSKMYVPEGSWYCPECAINKVG 424
C+ PEG+W CP C K+G
Sbjct: 379 CLDPDMEKAPEGTWSCPHC--EKMG 401
Score = 149 (57.5 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 345 DRMKTSCKAKPLGFKGTEMDAPGVDV---DGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
++M +A+ +G E + G + D + + CR+C G LLCCD CPS+YH C+
Sbjct: 398 EKMGIQWEAREDASEGEEDNEAGGEAEEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCL 457
Query: 402 GVSKMYVPEGSWYCPEC 418
+P G W CP C
Sbjct: 458 NPPLPEIPNGEWICPRC 474
Score = 63 (27.2 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 76 GDCEDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVD 135
G +D D E R + E+D + +L+ D VK+ K +KS+ E K G ++
Sbjct: 3 GSEDDRDDFEHRSVMQEEDDLEEELSEN----DAPKVKKKKKAKKSSRESK-GSKRNRSR 57
Query: 136 RIEASTLS-EVSCGLTVEDVGEQVEGDMDSS 165
R E S E G ++D GE+ + + S
Sbjct: 58 REEIGISSPEPGEGPDLDD-GEEDRSESEGS 87
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1169 TQVAKKKMMLTHLVVRPGLGSKTGSMSK 1196
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
+VI S P N++ F + K + Y + +E+
Sbjct: 1125 VVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEE 1166
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 146 (56.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N DEC +CG G L+CCDGCP A+H C+ VP G W C C
Sbjct: 423 NEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSC 468
>ZFIN|ZDB-GENE-041119-1 [details] [associations]
symbol:zmynd8 "zinc finger, MYND-type containing 8"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
ZFIN:ZDB-GENE-041119-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX296530 IPI:IPI00512740
Ensembl:ENSDART00000040235 Bgee:E7FBQ3 Uniprot:E7FBQ3
Length = 1201
Score = 149 (57.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 327 SKTPDCKNREAVEFNAENDRMKTSCKAKPLGF-KGTEMDAPGVDV---DGNGD-ECRICG 381
S +P K ++ N+ D+ + + P + K + VDV DG D C +C
Sbjct: 59 SPSPVKKKKKPGAVNSSKDQ--SELRHGPFYYVKQPALTTDPVDVVPQDGRNDFYCWVCH 116
Query: 382 MDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLRGAELFGI 441
+G +LCC+ CP YH +C+ ++ PEG W+CPEC K+ I T + + +
Sbjct: 117 REGQVLCCELCPRVYHAKCLKLAAE--PEGDWFCPEC--EKITVAECIETQSKAMTMLTL 172
Query: 442 D 442
D
Sbjct: 173 D 173
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 144 (55.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N DEC +C G L+CCDGCP A+H C+ +P G+W C C
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 143 (55.4 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E V++ A+ + + + + G K E D + + CR+C G LLCC
Sbjct: 292 PHCE-KEGVQWEAKEEEEEYEEEGEEEGEKEEE--------DDHMEYCRVCKDGGELLCC 342
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D C S+YH C+ +P G W CP C
Sbjct: 343 DACISSYHIHCLNPPLPDIPNGEWLCPRC 371
Score = 141 (54.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 37/117 (31%), Positives = 49/117 (41%)
Query: 302 SEVGLDPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGT 361
S+ G +P+A S++ VH S PD R R K P G
Sbjct: 184 SDEGPEPEAEE--SDLDSGSVHSA-SGRPDGPVRTKKLKRGRPGRKKKKVLGCP-AVAGE 239
Query: 362 EMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
E + G + D + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 240 E-EVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 294
>UNIPROTKB|F1LWS6 [details] [associations]
symbol:F1LWS6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00209838 Ensembl:ENSRNOT00000020980
ArrayExpress:F1LWS6 Uniprot:F1LWS6
Length = 822
Score = 138 (53.6 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 48/180 (26%), Positives = 76/180 (42%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVT--IGTS 432
D CR+C G LLCC+ C + YH C+ VPE W C C +KV P VT +
Sbjct: 282 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKV-PGVTDCVAEV 340
Query: 433 LRGA-----ELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYNP-IDIPKVLQALLS 485
+ E G D R + L++ + N E+ + YY+ + + +++ L
Sbjct: 341 QKNKPYVRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKVWYYSTKVQLAELIDCLDK 400
Query: 486 SVQHVSLYLGICKAILHYWDIPESVVPFMGMETNTIN-AKADEKFCSQSHHPPIKESQRI 544
L C+ +L DI E + M + + N A+ K + + I +S RI
Sbjct: 401 DYWEAEL----CR-VLE--DIREEMQQHMDVTEDLTNKARGSNKSFLAAANEEILDSLRI 453
Score = 54 (24.1 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 853 KWRKQV--AEACTLNSIKALLLELEENICHIALSGDWVKLMDDWL 895
KW V ++ T+++++ + +LE NI L +W +W+
Sbjct: 717 KWNGSVHGSKVLTISTLRLTITQLESNIPSSFLHPNWASHRANWI 761
Score = 48 (22.0 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 21/74 (28%), Positives = 30/74 (40%)
Query: 74 EDGDCEDLDSSELRQFLLNENDFDADLTRRRKKLDDW---LVKRSLKNEKSNLEKKDGDA 130
EDGD E+ SE + + ND D+ R+ D+ K S K+ + G
Sbjct: 40 EDGDAEETQDSEDDKNMTC-NDHDSYYPEEREDADEDGRDCKKSSFKSPYTFSSTPGGRR 98
Query: 131 KSEVDRIEASTLSE 144
K V R + L E
Sbjct: 99 KPRVHRPRSPILEE 112
Score = 45 (20.9 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 231 LDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSE 290
+D +TWP + Y S K Y E Y + + K+ +LQ L D L +
Sbjct: 212 IDGMTWPEVLRVYCESD---KEYHHVLPYQEAEDYPYGPVES--KIKVLQFLVDQFLTTN 266
Query: 291 ELRAEI 296
R E+
Sbjct: 267 IAREEL 272
Score = 42 (19.8 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 129 DAKSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDS 168
D +SE D E +SE ED E+ +GD + + DS
Sbjct: 18 DHESEDDDEEEDMVSE-------EDEEEEEDGDAEETQDS 50
Score = 41 (19.5 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 1073 VMKNIID--IELSQDGKEKYWFPETCLPLFLIKEYEERVD 1110
VMK I+ +L Q+GK + + + F + +++ R D
Sbjct: 658 VMKGNINNYFKLGQEGKYRVYHNQYSTNSFALNKHQHRED 697
Score = 38 (18.4 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 113 KRSLKNEKSNLEKKDGDAKSEVD 135
+ + +E+ E++DGDA+ D
Sbjct: 27 EEDMVSEEDEEEEEDGDAEETQD 49
Score = 38 (18.4 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 17/64 (26%), Positives = 27/64 (42%)
Query: 70 RVDYEDGDCEDLDSSE-LRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNL---EK 125
+V Y+D + ED D E + E + D D + DD K N+ + E+
Sbjct: 13 KVVYDDHESEDDDEEEDMVSEEDEEEEEDGDAEETQDSEDD---KNMTCNDHDSYYPEER 69
Query: 126 KDGD 129
+D D
Sbjct: 70 EDAD 73
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 161 (61.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 371 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 419
D N D C ICG G L+CCDGCPS +H C+ + K P G+WYC C+
Sbjct: 647 DPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKF--PSGAWYCYNCS 693
Score = 39 (18.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 109 DWLVKRSLKNEKSNLEKKDGDAKSEVDRI 137
DW K+ LK +S LE + + + +R+
Sbjct: 341 DWKAKKRLKLCESPLESRHNNPLIDDERM 369
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 143 (55.4 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIG 402
+ ++ C PL +E P V+ N DEC +C G L+CCDGCP A+H C+
Sbjct: 271 DEQKVGQQCGVPPLPSLPSE---PQVN-QKNEDECAVCHDGGELICCDGCPRAFHLACLS 326
Query: 403 VSKMYVPEGSWYCPECAINKV 423
+P G W C C +V
Sbjct: 327 PPLQEIPSGLWRCSCCLQGRV 347
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 143 (55.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N DEC +C G L+CCDGCP A+H C+ +P G+W C C
Sbjct: 303 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSC 348
>UNIPROTKB|Q2HXV3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:DQ368678 IPI:IPI00941004 SMR:Q2HXV3
STRING:Q2HXV3 Ensembl:ENST00000372023 UCSC:uc010ghr.1
Uniprot:Q2HXV3
Length = 1136
Score = 159 (61.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 294 AEIDAREESEV--GLDPDAASYGSEIARRRVHPR-FSKTPDCKNREAVEFNAENDRMKTS 350
AE + + E EV G+D S A R R F P N + + + + K
Sbjct: 7 AEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKK-- 64
Query: 351 CKAKPLGFKGTEMDAPGVDVDGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVP 409
K KP G +++ + DG D C +C +G +LCC+ CP YH +C+ ++ P
Sbjct: 65 -KKKP-GL----LNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--P 116
Query: 410 EGSWYCPEC 418
EG W+CPEC
Sbjct: 117 EGDWFCPEC 125
Score = 40 (19.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDV 629
P +K E ST S++ADP V
Sbjct: 636 PVEIK-EELKSTSPASEKADPGAV 658
Score = 39 (18.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 36/164 (21%), Positives = 63/164 (38%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDVTYQSLVDRSSAIDFMTC-----TSQISNDGNSGHAS 660
P H+K S + Q+AD ++V ++L S T T+ S + +
Sbjct: 978 PEHMK-SCTQSATAPQQEAD-AEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEK 1035
Query: 661 SCLSPNISFLSKERNHGGLLGVGTNYAN--KCAFMGSVFKPHSYINQYMHGEFXXXXXXK 718
S S + LS R + +G+N + K + P + +Q H + K
Sbjct: 1036 SKESGSTLDLSGSRETPSSILLGSNQGSVSKRCDKQPAYAPTTTDHQ-PHPNYPAQ---K 1091
Query: 719 LAVLSSEESQASEMHKSGNTRKAMSGSISLQAKAFSSTASRFFW 762
S++ S +S K G+TR + S S ++ + FW
Sbjct: 1092 YHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFW 1135
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 146 (56.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 26/67 (38%), Positives = 33/67 (49%)
Query: 372 GNGDE-CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIG 430
G D C +C G L+ CDGCPSA+H C+G+ VP+G W+C C G
Sbjct: 691 GENDVFCSVCHYGGKLILCDGCPSAFHANCLGLED--VPDGDWFCQSCCCGACGQFFLKT 748
Query: 431 TSLRGAE 437
TS E
Sbjct: 749 TSTNAKE 755
>UNIPROTKB|E1B6X6 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071884 "vitamin D receptor activator activity"
evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0043596 "nuclear replication fork" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0035173 "histone
kinase activity" evidence=IEA] [GO:0034725 "DNA
replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0003007 GO:GO:0008270 GO:GO:0003682 GO:GO:0004713
GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:DAAA02058197 IPI:IPI00704240 UniGene:Bt.32325
Ensembl:ENSBTAT00000006848 NextBio:20868520 Uniprot:E1B6X6
Length = 1482
Score = 115 (45.5 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1179 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
Score = 81 (33.6 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 25/102 (24%), Positives = 49/102 (48%)
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDA-ASYGSE 316
F +++ E++ L++ KL IL LC +L + ++ ++ R++ L + A E
Sbjct: 728 FLEKLETSEFFELTSEEKLQILTALCHRILMTYSVQDHMETRQQMSAELWKERLAVLKEE 787
Query: 317 IARRRVHPRFSKTPDCKNRE-AVEFNA--ENDRMKTSCKAKP 355
++R + K + +N+E E N + DR K K +P
Sbjct: 788 NDKKRAEKQKRKEMEARNKENGKEENGLGKADRKKEVVKFEP 829
Score = 55 (24.4 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 30/126 (23%), Positives = 52/126 (41%)
Query: 100 LTRRRKKLDDWLVKRSL-KNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGEQV 158
L ++R++L + L +++ + EK LE+ + + E + TL T E + +
Sbjct: 547 LKKKREELKEKLKEKAKERREKEMLERLEKQKRYEDQELTGKTLPTFKLVDTPEGLPNTL 606
Query: 159 EGDMDSSSD--SC-EHVRETDAGLEAETXXXXXXXXXXSSGTIALMRVLRRHLETLSSDG 215
GD+ + SC + DA G + L RVL L+TL D
Sbjct: 607 FGDVAMVVEFLSCYSGLLLPDAQYPITAVSLMEALSAEKGGFLYLNRVLVILLQTLLQD- 665
Query: 216 SELASN 221
E+A +
Sbjct: 666 -EIAED 670
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 118 (46.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYC 415
N D C C G LLCCD CP+A+H +C +S+ +P G W C
Sbjct: 73 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>UNIPROTKB|J9P3J2 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:AAEX03004244 EMBL:AAEX03004243
Ensembl:ENSCAFT00000046112 Uniprot:J9P3J2
Length = 1392
Score = 115 (45.5 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1088 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1140
Score = 82 (33.9 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 27/109 (24%), Positives = 51/109 (46%)
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDA-ASYGSE 316
F +++ E++ L++ KL IL LC +L + ++ ++ R++ L + A E
Sbjct: 638 FLEKLETSEFFELTSEEKLQILTALCHRILMTYSVQDHMETRQQMSAELWKERLAVLKEE 697
Query: 317 IARRRVHPRFSKTPDCKNRE-AVEFNA--ENDRMKTSCKAKPLGFKGTE 362
++R + K + +N+E E N + DR K K +P G E
Sbjct: 698 NDKKRAEKQKRKEMEARNKENGKEENGLGKPDRKKEVVKFEPQVDLGAE 746
Score = 53 (23.7 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 30/126 (23%), Positives = 52/126 (41%)
Query: 100 LTRRRKKLDDWLVKRSL-KNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGEQV 158
L ++R++L + L +++ + EK LEK + + E + +L T E + +
Sbjct: 457 LKKKREELKEKLKEKAKERREKEMLEKLEKQKRYEDQELTGKSLPAFRLVDTPEGLPNTL 516
Query: 159 EGDMDSSSD--SC-EHVRETDAGLEAETXXXXXXXXXXSSGTIALMRVLRRHLETLSSDG 215
GD+ + SC + DA G + L RVL L+TL D
Sbjct: 517 FGDVAMVVEFLSCYSGLLLPDAQYPITAVSLMEALSAEKGGFLYLNRVLVILLQTLLQD- 575
Query: 216 SELASN 221
E+A +
Sbjct: 576 -EIAED 580
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 144 (55.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C++C G LLCCD CPS YH C+ +P+G W CP C
Sbjct: 38 CKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
Score = 52 (23.4 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 18/83 (21%), Positives = 35/83 (42%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKCACASCQIDVLLGN-AVK 1169
++I S P N++ F + +K + Y + +E+ + ++L + V+
Sbjct: 677 VIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVR 736
Query: 1170 CGTCQGMLITNLSVFCFRDVLGF 1192
G G + TN S D+L F
Sbjct: 737 PG--MGGMTTNFSKDELEDILRF 757
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 136 (52.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C +C G+LLCC+ CP+A+H C+ + +P+GSW+C +C K
Sbjct: 158 CFVCSKGGSLLCCESCPAAFHPDCLNIE---MPDGSWFCNDCRAGK 200
>UNIPROTKB|E2RED7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 EMBL:AAEX03004244
EMBL:AAEX03004243 Ensembl:ENSCAFT00000020881 Uniprot:E2RED7
Length = 1482
Score = 115 (45.5 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1178 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1230
Score = 82 (33.9 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 27/109 (24%), Positives = 51/109 (46%)
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDA-ASYGSE 316
F +++ E++ L++ KL IL LC +L + ++ ++ R++ L + A E
Sbjct: 728 FLEKLETSEFFELTSEEKLQILTALCHRILMTYSVQDHMETRQQMSAELWKERLAVLKEE 787
Query: 317 IARRRVHPRFSKTPDCKNRE-AVEFNA--ENDRMKTSCKAKPLGFKGTE 362
++R + K + +N+E E N + DR K K +P G E
Sbjct: 788 NDKKRAEKQKRKEMEARNKENGKEENGLGKPDRKKEVVKFEPQVDLGAE 836
Score = 53 (23.7 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 30/126 (23%), Positives = 52/126 (41%)
Query: 100 LTRRRKKLDDWLVKRSL-KNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGEQV 158
L ++R++L + L +++ + EK LEK + + E + +L T E + +
Sbjct: 547 LKKKREELKEKLKEKAKERREKEMLEKLEKQKRYEDQELTGKSLPAFRLVDTPEGLPNTL 606
Query: 159 EGDMDSSSD--SC-EHVRETDAGLEAETXXXXXXXXXXSSGTIALMRVLRRHLETLSSDG 215
GD+ + SC + DA G + L RVL L+TL D
Sbjct: 607 FGDVAMVVEFLSCYSGLLLPDAQYPITAVSLMEALSAEKGGFLYLNRVLVILLQTLLQD- 665
Query: 216 SELASN 221
E+A +
Sbjct: 666 -EIAED 670
>UNIPROTKB|J9PAU7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
EMBL:AAEX03004244 EMBL:AAEX03004243 Ensembl:ENSCAFT00000046458
Uniprot:J9PAU7
Length = 1485
Score = 115 (45.5 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1181 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1233
Score = 82 (33.9 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 27/109 (24%), Positives = 51/109 (46%)
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDA-ASYGSE 316
F +++ E++ L++ KL IL LC +L + ++ ++ R++ L + A E
Sbjct: 731 FLEKLETSEFFELTSEEKLQILTALCHRILMTYSVQDHMETRQQMSAELWKERLAVLKEE 790
Query: 317 IARRRVHPRFSKTPDCKNRE-AVEFNA--ENDRMKTSCKAKPLGFKGTE 362
++R + K + +N+E E N + DR K K +P G E
Sbjct: 791 NDKKRAEKQKRKEMEARNKENGKEENGLGKPDRKKEVVKFEPQVDLGAE 839
Score = 53 (23.7 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 30/126 (23%), Positives = 52/126 (41%)
Query: 100 LTRRRKKLDDWLVKRSL-KNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGEQV 158
L ++R++L + L +++ + EK LEK + + E + +L T E + +
Sbjct: 550 LKKKREELKEKLKEKAKERREKEMLEKLEKQKRYEDQELTGKSLPAFRLVDTPEGLPNTL 609
Query: 159 EGDMDSSSD--SC-EHVRETDAGLEAETXXXXXXXXXXSSGTIALMRVLRRHLETLSSDG 215
GD+ + SC + DA G + L RVL L+TL D
Sbjct: 610 FGDVAMVVEFLSCYSGLLLPDAQYPITAVSLMEALSAEKGGFLYLNRVLVILLQTLLQD- 668
Query: 216 SELASN 221
E+A +
Sbjct: 669 -EIAED 673
>UNIPROTKB|Q9UIG0 [details] [associations]
symbol:BAZ1B "Tyrosine-protein kinase BAZ1B" species:9606
"Homo sapiens" [GO:0004715 "non-membrane spanning protein tyrosine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IEA]
[GO:0005721 "centromeric heterochromatin" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0035173 "histone kinase activity" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IDA] [GO:0016572
"histone phosphorylation" evidence=IDA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IDA] [GO:0032947 "protein
complex scaffold" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=IMP] [GO:0071884 "vitamin D receptor activator activity"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=NAS] [GO:0043596 "nuclear replication fork" evidence=IDA]
[GO:0003007 "heart morphogenesis" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0005524 GO:GO:0046872 GO:GO:0003007
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 GO:GO:0004715
GO:GO:0004713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0032947 GO:GO:0000793
GO:GO:0048096 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
EMBL:AF084479 EMBL:AF072810 EMBL:AB032253 EMBL:AC005074
EMBL:AC005089 EMBL:CH471200 EMBL:BC065029 EMBL:BC136520
IPI:IPI00069817 IPI:IPI00216695 RefSeq:NP_115784.1
UniGene:Hs.647016 PDB:1F62 PDBsum:1F62 ProteinModelPortal:Q9UIG0
SMR:Q9UIG0 DIP:DIP-35642N IntAct:Q9UIG0 MINT:MINT-1894324
STRING:Q9UIG0 PhosphoSite:Q9UIG0 DMDM:22653670 PaxDb:Q9UIG0
PRIDE:Q9UIG0 Ensembl:ENST00000339594 Ensembl:ENST00000404251
Ensembl:ENST00000573731 Ensembl:ENST00000575505 GeneID:9031
KEGG:hsa:9031 UCSC:uc003tyc.3 CTD:9031 GeneCards:GC07M072854
HGNC:HGNC:961 HPA:CAB037158 MIM:605681 neXtProt:NX_Q9UIG0
Orphanet:904 PharmGKB:PA25271 HOVERGEN:HBG050668 InParanoid:Q9UIG0
KO:K11658 OMA:CNKAFHL OrthoDB:EOG4MKNFK PhylomeDB:Q9UIG0
ChiTaRS:BAZ1B EvolutionaryTrace:Q9UIG0 GenomeRNAi:9031
NextBio:33835 Bgee:Q9UIG0 CleanEx:HS_BAZ1B Genevestigator:Q9UIG0
GermOnline:ENSG00000009954 GO:GO:0071778 GO:GO:0035173
GO:GO:0071884 GO:GO:0034725 Uniprot:Q9UIG0
Length = 1483
Score = 115 (45.5 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1179 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
Score = 86 (35.3 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 27/114 (23%), Positives = 54/114 (47%)
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDA-ASYGSE 316
F +++ E++ L++ KL IL LC +L + ++ ++ R++ L + A E
Sbjct: 728 FLEKLETSEFFELTSEEKLQILTALCHRILMTYSVQDHMETRQQMSAELWKERLAVLKEE 787
Query: 317 IARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDV 370
++R + K + KN+E EN KT K + + F+ ++D D+
Sbjct: 788 NDKKRAEKQKRKEMEAKNKE--NGKVENGLGKTDRKKEIVKFE-PQVDTEAEDM 838
>UNIPROTKB|F1NME8 [details] [associations]
symbol:Gga.29865 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:AADN02019301
IPI:IPI00581329 Ensembl:ENSGALT00000007232 Uniprot:F1NME8
Length = 1197
Score = 157 (60.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 38/147 (25%), Positives = 68/147 (46%)
Query: 284 DDVLDSEELRAEIDAREESEVGLDPDAAS-------YGSEIARRRVH-PRFSKTPDCKNR 335
+++ +E+ +D S+ +DP +A + S H P+ + T K +
Sbjct: 4 EEIKAEQEVVEGMDISTRSKADVDPGSAERTAQKRKFPSPPHSSNGHSPQDASTSPIKKK 63
Query: 336 EAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDV---DGNGD-ECRICGMDGTLLCCDG 391
+ N++ ++ + P + + VDV DG D C +C +G +LCC+
Sbjct: 64 KKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCEL 123
Query: 392 CPSAYHTRCIGVSKMYVPEGSWYCPEC 418
CP YH +C+ ++ PEG W+CPEC
Sbjct: 124 CPRVYHAKCLKLTAE--PEGDWFCPEC 148
Score = 41 (19.5 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 738 TRKAMSGSISLQAKAFSSTAS 758
TR +GS+S K FS AS
Sbjct: 495 TRTGQAGSLSGSPKPFSPQAS 515
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 638 SSAIDFMTCTSQISNDGNSGHASSCLSPNIS 668
+S I +T T IS +SG A++ LS +++
Sbjct: 893 TSTITLVTSTQPISMVTSSGSANT-LSSSVN 922
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 127 (49.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 368 VDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPEC 418
+D + N D C C G+ LCCD CP ++H C+ + +P+G W+C EC
Sbjct: 255 IDFE-NEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNEC 306
Score = 61 (26.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 91 LNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSE 133
L+ + + DL +RRK + ++RS KNE SNL +D + E
Sbjct: 39 LSSQNVNYDL-KRRKIITSEGIERSFKNEHSNLAVEDNIPEEE 80
Score = 49 (22.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 569 LHTFMNTMSQTGVPFV-QSNDITVTEKLQDCLVLNG----KLPGHVKME-SAMSTGSVSQ 622
++ M T+ + F+ Q+N++ + KL + + +LP ++K A+ TGS Q
Sbjct: 312 INNSMATLKKIESNFIKQNNNVKIFAKLLFNIDSHNPKQFQLPNYIKETFPAVKTGSRGQ 371
Query: 623 QADPSD---VTYQSLVDRSSAIDFMTCTSQISN---DGNSGHASSCLSPN 666
+D +D +T + L + S S + D NSG C N
Sbjct: 372 YSDENDKIPLTDRQLFNTSYGQSITKLDSYNPDTHIDSNSGKFLICYKCN 421
>POMBASE|SPAC16C9.05 [details] [associations]
symbol:cph1 "Clr6 histone deacetylase associated PHD
protein-1 Cph1" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0019787 "small conjugating protein ligase activity"
evidence=ISM] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPAC16C9.05 GO:GO:0005829 EMBL:CU329670 GO:GO:0046872
GO:GO:0071276 GO:GO:0071585 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG317492 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 PIR:T37778 RefSeq:NP_593079.1
ProteinModelPortal:Q09819 STRING:Q09819 EnsemblFungi:SPAC16C9.05.1
GeneID:2542318 KEGG:spo:SPAC16C9.05 OrthoDB:EOG4N6053
NextBio:20803379 Uniprot:Q09819
Length = 404
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINKVGP 425
N D C CG G +CC+GCP ++H C+ ++ +PEGSW+C C+I P
Sbjct: 116 NVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSHHP 170
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N DEC C G LLCCDGCP A+H C+ +P G+W C C
Sbjct: 303 NEDECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNC 348
>ZFIN|ZDB-GENE-120215-90 [details] [associations]
symbol:si:ch73-39g20.1 "si:ch73-39g20.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-120215-90 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000064411 EMBL:CU570791 IPI:IPI00897032
Ensembl:ENSDART00000112648 Bgee:E7FCR1 Uniprot:E7FCR1
Length = 1263
Score = 149 (57.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 319 RRRVHPRFSKT--PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDE 376
RR R+S+ +CK++ A E A +D+ + G +E ++ + D
Sbjct: 714 RRHRRTRWSRIRMKNCKSKVAQEEEAVDDKAENDDNKSEKGDHNSEAESEQSNEFPPEDA 773
Query: 377 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C+ CG+ +L CD C S YHT C+ M +P+G W+CP C
Sbjct: 774 CKHCGLANHPELILLCDLCDSGYHTACLRPPLMIIPDGEWFCPPC 818
Score = 48 (22.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 70 RVDYEDGDCEDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGD 129
RV E+ D DLD S + N ND L + + K++ + + ++ ++ +
Sbjct: 165 RVYSEEQD--DLDGSSWKLIARNRNDLADTLEQLKAKIEPAVTDQDKQDAPTSPNMETEG 222
Query: 130 AKSEV 134
K EV
Sbjct: 223 VKGEV 227
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINK 422
N D C C G LLCCD CP+A+H +C +S+ +P G W C C + +
Sbjct: 79 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 130
>UNIPROTKB|F5H0X3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
IPI:IPI00418316 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:F5H0X3 SMR:F5H0X3 PRIDE:F5H0X3
Ensembl:ENST00000536340 UCSC:uc010zxy.1 OMA:VDNIRRK
ArrayExpress:F5H0X3 Bgee:F5H0X3 Uniprot:F5H0X3
Length = 1241
Score = 155 (59.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 324 PRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDV---DGNGD-ECRI 379
P+ + T K ++ N++ ++ + P + + VDV DG D C +
Sbjct: 61 PQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWV 120
Query: 380 CGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 121 CHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 157
Score = 40 (19.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDV 629
P +K E ST S++ADP V
Sbjct: 668 PVEIK-EELKSTSPASEKADPGAV 690
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 36/164 (21%), Positives = 63/164 (38%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDVTYQSLVDRSSAIDFMTC-----TSQISNDGNSGHAS 660
P H+K S + Q+AD ++V ++L S T T+ S + +
Sbjct: 1083 PEHMK-SCTQSATAPQQEAD-AEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEK 1140
Query: 661 SCLSPNISFLSKERNHGGLLGVGTNYAN--KCAFMGSVFKPHSYINQYMHGEFXXXXXXK 718
S S + LS R + +G+N + K + P + +Q H + K
Sbjct: 1141 SKESGSTLDLSGSRETPSSILLGSNQGSVSKRCDKQPAYAPTTTDHQ-PHPNYPAQ---K 1196
Query: 719 LAVLSSEESQASEMHKSGNTRKAMSGSISLQAKAFSSTASRFFW 762
S++ S +S K G+TR + S S ++ + FW
Sbjct: 1197 YHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFW 1240
>UNIPROTKB|I3LCE6 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071884 "vitamin D receptor activator activity"
evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0043596 "nuclear replication fork" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0035173 "histone
kinase activity" evidence=IEA] [GO:0034725 "DNA
replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0003007 GO:GO:0008270 GO:GO:0003682 GO:GO:0004713
GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:FP312931 Ensembl:ENSSSCT00000030732 Uniprot:I3LCE6
Length = 1483
Score = 115 (45.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1179 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYAVPDGEWQCPAC 1231
Score = 82 (33.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 26/114 (22%), Positives = 54/114 (47%)
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDA-ASYGSE 316
F +++ E++ L++ KL IL LC +L + ++ ++ R++ L + A E
Sbjct: 728 FLEKLETSEFFELTSEEKLQILTALCHRILMTYSVQDHMETRQQMSAELWKERLAVLKEE 787
Query: 317 IARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDV 370
++R + K + +N+E EN K K + + F+ T++D D+
Sbjct: 788 NDKKRAEKQKRKEMEARNKE--NGKEENGLGKADRKKEVVKFE-TQVDIEADDM 838
>ZFIN|ZDB-GENE-030131-2581 [details] [associations]
symbol:whsc1 "Wolf-Hirschhorn syndrome candidate
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0010452
"histone H3-K36 methylation" evidence=IMP] [GO:0048706 "embryonic
skeletal system development" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2581
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0051216
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0048706 SMART:SM00293 EMBL:CR556722 KO:K11424 GO:GO:0010452
CTD:7468 EMBL:CT573111 IPI:IPI00492725 RefSeq:NP_001076020.1
UniGene:Dr.78031 Ensembl:ENSDART00000009499 GeneID:100000709
KEGG:dre:100000709 HOVERGEN:HBG106834 OMA:FESECLN NextBio:20784754
Uniprot:B8JIA4
Length = 1461
Score = 135 (52.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C IC G LLCC+ CP+A+H C+ ++ +P+GSW+C +C K
Sbjct: 926 CFICSKGGRLLCCESCPAAFHPDCLNIA---MPDGSWFCNDCRSGK 968
Score = 61 (26.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 69 YRVDYEDGDCEDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDG 128
Y VDY + E+ D+ LR L E + RR ++ +V++ +
Sbjct: 144 YEVDYTEEKAEETDAP-LR---LPEGVLTSPTARRDRQKKKGMVRKRIPPYPILTHAASS 199
Query: 129 DAKSEVD-RIEASTLSEVSCGLTVEDVGEQVEGDM 162
D + I ++ ++ CGL VE + E GDM
Sbjct: 200 DQSPLLHPTINSNDITIEPCGLPVESI-EHTHGDM 233
>CGD|CAL0003038 [details] [associations]
symbol:orf19.6506 species:5476 "Candida albicans" [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IEA]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 CGD:CAL0003038 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACQ01000020 EMBL:AACQ01000016
eggNOG:NOG145066 RefSeq:XP_720831.1 RefSeq:XP_721344.1
RefSeq:XP_888831.1 ProteinModelPortal:Q5AH34 GeneID:3637022
GeneID:3637451 GeneID:3703842 KEGG:cal:CaO19.13859
KEGG:cal:CaO19.6506 KEGG:cal:CaO19_6506 Uniprot:Q5AH34
Length = 688
Score = 138 (53.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 314 GSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGN 373
GS A++R + T K+ F+A KTS + K + +V N
Sbjct: 215 GSANAKQRPLKKIKVTSPTKSPRTKLFDA-----KTSNGSIVKQEKDKHHEEEEEEVKEN 269
Query: 374 GDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGP 425
D C CGM G +CC+ CP ++H C PE WYC EC KV P
Sbjct: 270 DDFCFACGMPGIFICCEKCPKSFHFTCCDPPIEEAPEDEWYCREC-YTKVHP 320
Score = 50 (22.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 79 EDL-DSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSE 133
EDL SELRQ LLNE R KL + ++ DG A ++
Sbjct: 165 EDLAKESELRQSLLNEKTSSKPKRTTRLKLTLRTPTQETGKQQQQKRSLDGSANAK 220
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 161 (61.7 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 371 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 419
D N D C ICG G L+CCDGCPS +H C+ + K P G+WYC C+
Sbjct: 647 DPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKF--PSGAWYCYNCS 693
Score = 40 (19.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 823 LPTIVTYIMYMEESLCG-LISGPFRSVSYRKKWRKQVAEACTLNSIKALLLELEENICHI 881
+P I T MY + +C L+ G V+Y + ++E +LL++ + C+
Sbjct: 878 MPFIGTRYMYRRQGMCRRLMDGIESFVAYFSQMFLAISE---------VLLDVWQFCCYP 928
Query: 882 ALSGD 886
A GD
Sbjct: 929 ACFGD 933
Score = 39 (18.8 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 109 DWLVKRSLKNEKSNLEKKDGDAKSEVDRI 137
DW K+ LK +S LE + + + +R+
Sbjct: 341 DWKAKKRLKLCESPLESRHNNPLIDDERM 369
>UNIPROTKB|E2R8R1 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:AAEX03013984 EMBL:AAEX03013985
Ensembl:ENSCAFT00000017108 OMA:PTINKGR Uniprot:E2R8R1
Length = 1143
Score = 152 (58.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 40/129 (31%), Positives = 59/129 (45%)
Query: 294 AEIDAREESEV--GLDPDAASYGSEIARRRVHPR-FSKTPDCKNREAVEFNAENDRMKTS 350
AE + + E EV G+D S R R F P N + + + + K
Sbjct: 7 AEEEIKTEQEVVEGMDISTRSKDPGSTERTAQKRKFPSPPHSSNGHSPQDTSTSPIKK-- 64
Query: 351 CKAKPLGFKGTEMDAPGVDVDGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVP 409
K KP G ++ + DG D C +C +G +LCC+ CP YH +C+ ++ P
Sbjct: 65 -KKKP-GL----LNNNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--P 116
Query: 410 EGSWYCPEC 418
EG W+CPEC
Sbjct: 117 EGDWFCPEC 125
Score = 40 (19.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 604 KLPGHVKM-ESAMSTGSVSQQADPSDV 629
KL V+ E ST S++ADP V
Sbjct: 632 KLANPVETKEELKSTSPASEKADPGSV 658
Score = 37 (18.1 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 723 SSEESQASEMHKS----GNTRKAMSGSISLQAKAFSSTAS 758
+SEES + KS + + +GS+S K FS AS
Sbjct: 456 ASEESM-DFLDKSTASPASAKTGQAGSLSGSPKTFSPQAS 494
>UNIPROTKB|B7ZM62 [details] [associations]
symbol:ZMYND8 "ZMYND8 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:BC136608 EMBL:BC144289 IPI:IPI00922821
SMR:B7ZM62 STRING:B7ZM62 Ensembl:ENST00000458360 UCSC:uc010zxz.1
HOGENOM:HOG000230951 Uniprot:B7ZM62
Length = 1054
Score = 159 (61.0 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 294 AEIDAREESEV--GLDPDAASYGSEIARRRVHPR-FSKTPDCKNREAVEFNAENDRMKTS 350
AE + + E EV G+D S A R R F P N + + + + K
Sbjct: 7 AEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKK-- 64
Query: 351 CKAKPLGFKGTEMDAPGVDVDGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVP 409
K KP G +++ + DG D C +C +G +LCC+ CP YH +C+ ++ P
Sbjct: 65 -KKKP-GL----LNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--P 116
Query: 410 EGSWYCPEC 418
EG W+CPEC
Sbjct: 117 EGDWFCPEC 125
Score = 40 (19.1 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDV 629
P +K E ST S++ADP V
Sbjct: 636 PVEIK-EELKSTSPASEKADPGAV 658
Score = 38 (18.4 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 723 SSEESQASEMHKSGNTRKAMSGSISLQAKAFSSTASRFFW 762
S++ S +S K G+TR + S S ++ + FW
Sbjct: 1014 SNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFW 1053
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 157 (60.3 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 369 DVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 419
D D + + CR+C G LLCCD CPSAYHT C+ +P+G W CP C+
Sbjct: 432 DDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482
Score = 50 (22.7 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 904 ASCNFVTTQKRGLSGKRGRKHSVISEVTADDCNDQ 938
A C TTQ R K+GRK S++ +D D+
Sbjct: 666 AVCTSETTQSRSKKSKKGRK----SKLKVEDDEDR 696
Score = 48 (22.0 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 23/91 (25%), Positives = 35/91 (38%)
Query: 94 NDFDADLTRRRKKLDDWLVKRSLKNEKSNLEK-KDGDAKSEVDRIEASTLSEVSCGLTVE 152
ND DA L + DD+ + S + +K K + G+ K + SE
Sbjct: 29 NDSDAPLKPNNDEDDDYDPEDSRRKKKGKKRKTRKGEEKGRKKKKRKKNESEEDSDFVQH 88
Query: 153 DVGEQVEGDMDSSSDSCEHVRETDAGLEAET 183
D E+VE +S + E A E E+
Sbjct: 89 D--EEVEYP-STSKRGRKRKEEKQAAKEKES 116
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(5) = 0.00019
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 93 ENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVD 135
++D+D + +RR+KK ++ EK +KK +SE D
Sbjct: 42 DDDYDPEDSRRKKKGKKRKTRKG--EEKGRKKKKRKKNESEED 82
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 949 TKLISKKAILPHTIIRNAARRGGLRKISGVNYTAE 983
T++ +K +L H ++R GG G N+T +
Sbjct: 1187 TQVAKRKMMLTHLVVRPGM--GG----KGANFTKQ 1215
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + + Y R+ +E+
Sbjct: 1143 VIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEE 1184
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 1009 QVRYIDLHVRWSELVRPEQNLQDGKGPE 1036
QV Y D V ++ R + N QD G E
Sbjct: 1329 QVNYTDGGVVAADTTRDDSNWQDN-GSE 1355
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 142 (55.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N DEC +C G L+CCDGCP A+H C+ +P G+W C C
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRCSSC 340
Score = 41 (19.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 651 SNDGNSGHASSCLSPNISFLSKERNHGGLL 680
+ DG+SGH ++ L E + G+L
Sbjct: 499 AGDGSSGHEPVLHRDDLESLLNEHSFDGIL 528
>UNIPROTKB|Q2HXV1 [details] [associations]
symbol:ZMYND8 "RACK7 isoform l" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 Pfam:PF00855 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
EMBL:DQ368680 IPI:IPI01009867 SMR:Q2HXV1 Ensembl:ENST00000540497
UCSC:uc002xsv.1 Uniprot:Q2HXV1
Length = 1134
Score = 159 (61.0 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 294 AEIDAREESEV--GLDPDAASYGSEIARRRVHPR-FSKTPDCKNREAVEFNAENDRMKTS 350
AE + + E EV G+D S A R R F P N + + + + K
Sbjct: 7 AEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKK-- 64
Query: 351 CKAKPLGFKGTEMDAPGVDVDGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVP 409
K KP G +++ + DG D C +C +G +LCC+ CP YH +C+ ++ P
Sbjct: 65 -KKKP-GL----LNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--P 116
Query: 410 EGSWYCPEC 418
EG W+CPEC
Sbjct: 117 EGDWFCPEC 125
Score = 40 (19.1 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDV 629
P +K E ST S++ADP V
Sbjct: 589 PVEIK-EELKSTSPASEKADPGAV 611
Score = 38 (18.4 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 723 SSEESQASEMHKSGNTRKAMSGSISLQAKAFSSTASRFFW 762
S++ S +S K G+TR + S S ++ + FW
Sbjct: 1094 SNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFW 1133
>UNIPROTKB|J3KPU3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
ProteinModelPortal:J3KPU3 Ensembl:ENST00000396281 Uniprot:J3KPU3
Length = 1186
Score = 159 (61.0 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 294 AEIDAREESEV--GLDPDAASYGSEIARRRVHPR-FSKTPDCKNREAVEFNAENDRMKTS 350
AE + + E EV G+D S A R R F P N + + + + K
Sbjct: 12 AEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKK-- 69
Query: 351 CKAKPLGFKGTEMDAPGVDVDGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVP 409
K KP G +++ + DG D C +C +G +LCC+ CP YH +C+ ++ P
Sbjct: 70 -KKKP-GL----LNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--P 121
Query: 410 EGSWYCPEC 418
EG W+CPEC
Sbjct: 122 EGDWFCPEC 130
Score = 40 (19.1 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDV 629
P +K E ST S++ADP V
Sbjct: 641 PVEIK-EELKSTSPASEKADPGAV 663
Score = 38 (18.4 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 723 SSEESQASEMHKSGNTRKAMSGSISLQAKAFSSTASRFFW 762
S++ S +S K G+TR + S S ++ + FW
Sbjct: 1146 SNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFW 1185
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 136 (52.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA---INKVGPIVTI 429
N D C IC G LL CD CP A+H C+ + +P G+W+C C +++ +
Sbjct: 614 NNDLCVICADGGNLLLCDSCPRAFHIECVSLPS--IPRGNWHCKYCENKFTSEIAGEYNV 671
Query: 430 GTSLRGAELFGIDLYERVFLGTCNHLLVLNASSNT 464
+S G +L G+D +++ G C + V N + T
Sbjct: 672 NSSAVG-QLEGVDPVDQL-AGRCIRV-VKNMEAET 703
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 155 (59.6 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + +G E D D + + CR+C G LLCC
Sbjct: 405 PHCE-KEGIQWEAKEDNSEGEEILEEVGGDPEEED------DHHMEFCRVCKDGGELLCC 457
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 458 DTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
Score = 48 (22.0 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 102 RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEASTLSE 144
+++KKL K+S K E++D D S+ + A L +
Sbjct: 108 KKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQLLED 150
Score = 45 (20.9 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELSEFQKKQLK 1133
KE EE+ + V+ + + P + E QKK LK
Sbjct: 1667 KEEEEKKE-VLLQNGETPKDLSDEKQKKNLK 1696
Score = 40 (19.1 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1134 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1175
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1178 TQVAKKKMMLTHLVVRPGLGSKTGSMSK 1205
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 155 (59.6 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + +G E D D + + CR+C G LLCC
Sbjct: 405 PHCE-KEGIQWEAKEDNSEGEEILEEVGGDPEEED------DHHMEFCRVCKDGGELLCC 457
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 458 DTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
Score = 48 (22.0 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 85 ELRQFLLNENDFDADLT---RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEAST 141
E + L + +D T +++KKL K+S K E++D D S+ + A
Sbjct: 88 EEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDEDDDSKEPKSSAQL 147
Query: 142 LSE 144
L +
Sbjct: 148 LED 150
Score = 42 (19.8 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELSEFQKKQLK 1133
KE EE+ D+++ + + P + E QKK K
Sbjct: 1667 KEEEEKKDVMLQ-NGETPKDLSDEKQKKNSK 1696
Score = 40 (19.1 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1134 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1175
Score = 38 (18.4 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1178 TQVAKKKMMLTHLVVRPGLGSKTGSMSK 1205
>UNIPROTKB|F1NP02 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 EMBL:AADN02033506
EMBL:AADN02033505 IPI:IPI00680686 Ensembl:ENSGALT00000030514
ArrayExpress:F1NP02 Uniprot:F1NP02
Length = 603
Score = 133 (51.9 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAPG-VDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 381 ENEKTETTFTF-PAAVQPVSLPSPSSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 439
Query: 402 GVSKMYVPEGSWYCPEC 418
+P+G W CP+C
Sbjct: 440 DPPLKTIPKGMWICPKC 456
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 155 (59.6 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + +G E D D + + CR+C G LLCC
Sbjct: 433 PHCE-KEGIQWEAKEDNSEGEEILEEVGGDPEEED------DHHMEFCRVCKDGGELLCC 485
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 486 DTCPSSYHIHCLNPPLPEIPNGEWLCPRC 514
Score = 48 (22.0 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 102 RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEASTLSE 144
+++KKL K+S K E++D D S+ + A L +
Sbjct: 136 KKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQLLED 178
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELSEFQKKQLK 1133
KE EE+ + V+ + + P + E QKK LK
Sbjct: 1701 KEEEEKKE-VLLQNGETPKDLSDEKQKKNLK 1730
Score = 40 (19.1 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1162 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1203
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1206 TQVAKKKMMLTHLVVRPGLGSKTGSMSK 1233
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 145 (56.1 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 371 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D + + CR+C G LLCCD CPS+YH C+ +P G W CP C
Sbjct: 342 DDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRC 389
Score = 56 (24.8 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 112 VKRSLKNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDSCEH 171
VK+ +K+ K +K G + + S+ G + E+ E+ E D DS+S +
Sbjct: 182 VKKKIKSSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEE-EREESDFDSASINSSS 240
Query: 172 VR-ETDAGL 179
VR E AGL
Sbjct: 241 VRSECSAGL 249
Score = 41 (19.5 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 1022 LVRPEQNLQDGKGPETE 1038
L +PE N GKG + E
Sbjct: 1568 LEKPESNSSPGKGEDKE 1584
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(4) = 0.00027
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1065 IHRHLPSRVMKNIIDIELSQDGKEKYWF 1092
+ +++P++ + I+ +ELSQ K+ Y F
Sbjct: 868 VFKNMPAKT-ELIVRVELSQMQKKYYKF 894
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(4) = 0.00027
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1047 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1088
>UNIPROTKB|F1P5P6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0000118
GeneTree:ENSGT00530000063984 EMBL:AADN02033506 EMBL:AADN02033505
IPI:IPI00574652 Ensembl:ENSGALT00000013689 ArrayExpress:F1P5P6
Uniprot:F1P5P6
Length = 651
Score = 133 (51.9 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAPG-VDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 429 ENEKTETTFTF-PAAVQPVSLPSPSSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 487
Query: 402 GVSKMYVPEGSWYCPEC 418
+P+G W CP+C
Sbjct: 488 DPPLKTIPKGMWICPKC 504
>ZFIN|ZDB-GENE-091204-206 [details] [associations]
symbol:si:dkey-21n12.3 "si:dkey-21n12.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 SMART:SM00384 ZFIN:ZDB-GENE-091204-206 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR018501 PROSITE:PS50827 EMBL:AL929053
GeneTree:ENSGT00530000064411 IPI:IPI00497346
Ensembl:ENSDART00000077161 Bgee:F1Q6Y6 Uniprot:F1Q6Y6
Length = 1369
Score = 135 (52.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 373 NGDECRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N D C+ CG+ +L CD C S YHT C+ M +P+G W+CP C
Sbjct: 852 NDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 900
Score = 55 (24.4 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 33/156 (21%), Positives = 67/156 (42%)
Query: 70 RVDYEDGDCEDLDSSELRQFLLNENDFDADLTRRRKKLDD-WLVKRSLKNEKSNLEKKDG 128
R+ E+ D DLD S + + N +D L + ++D LVK+ + SN
Sbjct: 168 RIYVEEQD--DLDGSSWKCIVRNRDDLAQILGLLKTQIDPALLVKKEQEEGSSNNSPNPD 225
Query: 129 DAKSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDSCEHVRETDAGLEAETXXXXX 188
D +++ + S L +E + + D+ S S++ E++ E E +
Sbjct: 226 DEENKKKEGAEGMFNLKSRQLLME----KSQDDL-SKSENKENILEK----ENKKEEGAD 276
Query: 189 XXXXXSSGTIALMRVLRRHLETLSSDGSELASNCLR 224
S + + L++H ET ++GS++ + ++
Sbjct: 277 ATDALSEKGLKVKEELQKHSET--ANGSDVIAGSIK 310
Score = 46 (21.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 93 ENDFDADLTRRRKKLDDWLVKRSLKNEKS-NLEKKDGDAKSEVDRIEASTLSEVSC 147
E+D + + T +D+ V++S K ++ N E++ D S E T ++ C
Sbjct: 803 ESDSEEEETEEDDSDEDYKVEKSKKRRRNRNRERRSSD--SSTSSSEDDTPNDDPC 856
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 155 (59.6 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + +G E D D + + CR+C G LLCC
Sbjct: 412 PHCE-KEGIQWEAKEDNSEGEEILEEVGGDPEEED------DHHMEFCRVCKDGGELLCC 464
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 465 DTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 47 (21.6 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 85 ELRQFLLNENDFDADLT---RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEAST 141
E + L + +D T +++KKL K+S K E+ D D S+ + A
Sbjct: 95 EEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQL 154
Query: 142 LSE 144
L +
Sbjct: 155 LED 157
Score = 42 (19.8 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 1075 KNIIDIELSQDGKEKYWFPETCLPLFLIKEYEERVDMVIAPSSKKPSNELSEFQKKQLK 1133
K + D+E +++ P KE EE+ ++++ + + P + E QKK +K
Sbjct: 1636 KGVADVEKAEEKAAGDLIPIVVEDKEEKKEEEEKKEVMLQ-NGETPKDLNDEKQKKNIK 1693
Score = 40 (19.1 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1141 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1182
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1185 TQVAKKKMMLTHLVVRPGLGSKTGSMSK 1212
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 155 (59.6 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + +G E D D + + CR+C G LLCC
Sbjct: 412 PHCE-KEGIQWEAKEDNSEGEEILEEVGGDPEEED------DHHMEFCRVCKDGGELLCC 464
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 465 DTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 47 (21.6 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 85 ELRQFLLNENDFDADLT---RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEAST 141
E + L + +D T +++KKL K+S K E+ D D S+ + A
Sbjct: 95 EEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQL 154
Query: 142 LSE 144
L +
Sbjct: 155 LED 157
Score = 41 (19.5 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELSEFQKKQLK 1133
KE EE+ ++++ + + P + E QKK +K
Sbjct: 1664 KEEEEKKEVMLQ-NGETPKDLNDEKQKKNIK 1693
Score = 40 (19.1 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1141 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1182
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1185 TQVAKKKMMLTHLVVRPGLGSKTGSMSK 1212
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 153 (58.9 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + +G E D D + + CR+C G LLCC
Sbjct: 405 PHCE-KEGIQWEAKEDNSEGEEILEEVGGDLEEED------DHHMEFCRVCKDGGELLCC 457
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 458 DTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
Score = 49 (22.3 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 85 ELRQFLLNENDFDADLT---RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEAST 141
E + L + +D T +++KKL K+S K E++D D S+ + A
Sbjct: 88 EEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQL 147
Query: 142 LSE 144
L +
Sbjct: 148 LED 150
Score = 41 (19.5 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELSEFQKKQLK 1133
KE EE+ ++++ + + P + E QKK +K
Sbjct: 1657 KEEEEKKEVMLQ-NGETPKDLNDEKQKKNIK 1686
Score = 40 (19.1 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1134 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1175
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1178 TQVAKKKMMLTHLVVRPGLGSKTGSMSK 1205
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 153 (58.9 bits), Expect = 9.4e-05, Sum P(3) = 9.4e-05
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + +G E D D + + CR+C G LLCC
Sbjct: 412 PHCE-KEGIQWEAKEDNSEGEEILEEVGGDLEEED------DHHMEFCRVCKDGGELLCC 464
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 465 DTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 49 (22.3 bits), Expect = 9.4e-05, Sum P(3) = 9.4e-05
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 85 ELRQFLLNENDFDADLT---RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEAST 141
E + L + +D T +++KKL K+S K E++D D S+ + A
Sbjct: 95 EEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQL 154
Query: 142 LSE 144
L +
Sbjct: 155 LED 157
Score = 41 (19.5 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELSEFQKKQLK 1133
KE EE+ ++++ + + P + E QKK +K
Sbjct: 1664 KEEEEKKEVMLQ-NGETPKDLNDEKQKKNIK 1693
Score = 40 (19.1 bits), Expect = 9.4e-05, Sum P(3) = 9.4e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1141 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1182
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1185 TQVAKKKMMLTHLVVRPGLGSKTGSMSK 1212
>UNIPROTKB|H0YDG9 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000531026
Bgee:H0YDG9 Uniprot:H0YDG9
Length = 276
Score = 126 (49.4 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 375 DECRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
+ C+ CG+ +L CD C S YHT C+ M +P+G W+CP C
Sbjct: 1 EPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 47
Score = 44 (20.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 1109 VDMVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKC 1153
++ +I P ++P + SE Q+++ K S+K + L R + KC
Sbjct: 87 IENIIPP--QEP--DFSEDQEEKKKDSKKSKANLLERRSTRTRKC 127
Score = 39 (18.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 1091 WFPETCLPLFLIKEYEERV-DMVIAPSSKKPSNELSE 1126
WF C L ++ EE++ D+ +A K+ + E
Sbjct: 42 WFCPPCQHKLLCEKLEEQLQDLDVALKKKERAERRKE 78
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 155 (59.6 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + +G E D D + + CR+C G LLCC
Sbjct: 432 PHCE-KEGIQWEAKEDNSEGEEILEEVGGDPEEED------DHHMEFCRVCKDGGELLCC 484
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 485 DTCPSSYHIHCLNPPLPEIPNGEWLCPRC 513
Score = 47 (21.6 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 85 ELRQFLLNENDFDADLT---RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEAST 141
E + L + +D T +++KKL K+S K E+ D D S+ + A
Sbjct: 115 EEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQL 174
Query: 142 LSE 144
L +
Sbjct: 175 LED 177
Score = 41 (19.5 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 1103 KEYEERVDMVIAPSSKKPSNELSEFQKKQLK 1133
KE EE+ ++++ + + P + E QKK +K
Sbjct: 1684 KEEEEKKEVMLQ-NGETPKDLNDEKQKKNIK 1713
Score = 40 (19.1 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1161 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1202
Score = 38 (18.4 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1205 TQVAKKKMMLTHLVVRPGLGSKTGSMSK 1232
>UNIPROTKB|J9NUG7 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002459
Ensembl:ENSCAFT00000043831 Uniprot:J9NUG7
Length = 1359
Score = 136 (52.9 bits), Expect = 0.00010, P = 0.00010
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C +C G+LLCC+ CP+A+H C+ + +P+GSW+C +C K
Sbjct: 828 CFVCSKGGSLLCCESCPAAFHPDCLNID---MPDGSWFCNDCRAGK 870
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 136 (52.9 bits), Expect = 0.00010, P = 0.00010
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C +C G+LLCC+ CP+A+H C+ + +P+GSW+C +C K
Sbjct: 830 CFVCSKGGSLLCCESCPAAFHPDCLNIE---MPDGSWFCNDCRAGK 872
>UNIPROTKB|F1PK46 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AAEX03002459 Ensembl:ENSCAFT00000023738 Uniprot:F1PK46
Length = 1362
Score = 136 (52.9 bits), Expect = 0.00010, P = 0.00010
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C +C G+LLCC+ CP+A+H C+ + +P+GSW+C +C K
Sbjct: 831 CFVCSKGGSLLCCESCPAAFHPDCLNID---MPDGSWFCNDCRAGK 873
>UNIPROTKB|F1MMY4 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV
EMBL:DAAA02018575 IPI:IPI00714897 Ensembl:ENSBTAT00000010497
Uniprot:F1MMY4
Length = 1368
Score = 136 (52.9 bits), Expect = 0.00010, P = 0.00010
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C +C G+LLCC+ CP+A+H C+ + +P+GSW+C +C K
Sbjct: 837 CFVCSKGGSLLCCESCPAAFHPDCLSIE---MPDGSWFCNDCRAGK 879
>UNIPROTKB|F1MS13 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0001967
GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:DAAA02041566 EMBL:DAAA02041567
IPI:IPI00716921 Ensembl:ENSBTAT00000012652 Uniprot:F1MS13
Length = 631
Score = 132 (51.5 bits), Expect = 0.00010, P = 0.00010
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 405 ENEKTETTFTF-PASVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 463
Query: 402 GVSKMYVPEGSWYCPEC 418
+P+G W CP C
Sbjct: 464 DPPLKTIPKGMWICPRC 480
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 154 (59.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 49/175 (28%), Positives = 74/175 (42%)
Query: 298 AREESEVGLDPDAASYGSEIARRRVHPRFSKTPDC--KNREAVEFN---AENDRMKTSCK 352
AR + G D + + S+ + + K D K +E N A+ D+ K + +
Sbjct: 186 ARRKRRDGSDGEGGGHDSDQEFEALIKQHEKQQDEAEKGKEEARINRAAAKVDKRKAALE 245
Query: 353 AKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGS 412
+ + + GV + + + C +C DG L+ CD C AYH CI + PEG
Sbjct: 246 SARASKRARKEQ--GVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGD 303
Query: 413 WYCPECAINKVGPIVTIGTSLRGAELFGIDLYERVFLGTCNHLLVLNASSNTEQY 467
W CP C + GP V I A+ +D Y R+ T N LL S+ Y
Sbjct: 304 WSCPHC--EEHGPDVLI-VEEEPAKA-NMD-YCRICKETSNILLCDTCPSSYHAY 353
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 949 TKLISKKAILPHTIIR 964
T + KK +L H ++R
Sbjct: 1075 TSVAKKKMLLTHLVVR 1090
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/58 (17%), Positives = 24/58 (41%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKCACASCQIDVLLGNAV 1168
++I S P N++ F + + + Y + +E+ + + +LL + V
Sbjct: 1031 VIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLV 1088
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 154 (59.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 49/175 (28%), Positives = 74/175 (42%)
Query: 298 AREESEVGLDPDAASYGSEIARRRVHPRFSKTPDC--KNREAVEFN---AENDRMKTSCK 352
AR + G D + + S+ + + K D K +E N A+ D+ K + +
Sbjct: 186 ARRKRRDGSDGEGGGHDSDQEFEALIKQHEKQQDEAEKGKEEARINRAAAKVDKRKAALE 245
Query: 353 AKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGS 412
+ + + GV + + + C +C DG L+ CD C AYH CI + PEG
Sbjct: 246 SARASKRARKEQ--GVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGD 303
Query: 413 WYCPECAINKVGPIVTIGTSLRGAELFGIDLYERVFLGTCNHLLVLNASSNTEQY 467
W CP C + GP V I A+ +D Y R+ T N LL S+ Y
Sbjct: 304 WSCPHC--EEHGPDVLI-VEEEPAKA-NMD-YCRICKETSNILLCDTCPSSYHAY 353
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 949 TKLISKKAILPHTIIR 964
T + KK +L H ++R
Sbjct: 1075 TSVAKKKMLLTHLVVR 1090
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/58 (17%), Positives = 24/58 (41%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKCACASCQIDVLLGNAV 1168
++I S P N++ F + + + Y + +E+ + + +LL + V
Sbjct: 1031 VIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLV 1088
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 139 (54.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKV 423
N DEC +C G L+CCDGCP A+H C+ +P G W C C ++
Sbjct: 297 NEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGRI 347
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 341 NAENDRMKTSCKAKP-LGFKGTEMDAPGVDVDGNGDECRI 379
N +N + + KP + KGT++ PG D +C +
Sbjct: 243 NLKN-KTRGGSSLKPVIRGKGTQVTIPGRDEQKVSQQCGV 281
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 147 (56.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 371 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D + + CR+C G LLCCD CPS+YH C+ +P G W CP C
Sbjct: 387 DDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 434
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 26/111 (23%), Positives = 45/111 (40%)
Query: 19 EDEDVTDGAGGKKRVVAVEAKPIALVGRYVLKEFESGIFLGKIVYYESGLYRVDYEDGDC 78
E+ED G GG E P+ L + K+ + GK E + + D
Sbjct: 1 EEED--GGLGGFDDYFPEE--PVGLPKKKKSKKLKENRSKGKRKKKEGSNDELSENEDDL 56
Query: 79 EDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGD 129
E+ SE + N+ +++KKL D K++ + K + ++ D D
Sbjct: 57 EEKSESEGSDYSPNK--------KKKKKLKDKKEKKAKRKRKDD-DEDDND 98
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1065 IHRHLPSRVMKNIIDIELSQDGKEKYWF 1092
+ +++P++ + I+ +ELSQ K+ Y F
Sbjct: 910 VFKNMPAKT-ELIVRVELSQMQKKYYKF 936
Score = 38 (18.4 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 112 VKRSLKNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDSCEH 171
V++ +K K +K G + + ++ G + E+ E+ E D+DS+S
Sbjct: 226 VRKKIKGSKDAKKKGKGRKVAGLKFRFGGISNKRKKGSSSEE-DEREESDLDSASIHSSS 284
Query: 172 VR 173
VR
Sbjct: 285 VR 286
>UNIPROTKB|I3LDB0 [details] [associations]
symbol:I3LDB0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:FP101987
Ensembl:ENSSSCT00000023373 Uniprot:I3LDB0
Length = 563
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 337 ENEKTETTFTF-PAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 395
Query: 402 GVSKMYVPEGSWYCPEC 418
+P+G W CP C
Sbjct: 396 DPPLKTIPKGMWICPRC 412
>UNIPROTKB|Q9ULU4 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISS] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 EMBL:U48251 Pfam:PF00855 GO:GO:0005634 EMBL:CH471077
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 InterPro:IPR000313 PROSITE:PS50812 GO:GO:0070491
EMBL:AL049540 EMBL:AL022342 EMBL:AF233453 EMBL:AF454056
EMBL:AF273045 EMBL:DQ082998 EMBL:DQ082999 EMBL:DQ368673
EMBL:DQ368674 EMBL:DQ368679 EMBL:DQ368669 EMBL:DQ368670
EMBL:DQ368671 EMBL:AB032951 EMBL:AK299899 EMBL:BX641005
EMBL:AL031666 EMBL:BC030721 IPI:IPI00385321 IPI:IPI00418316
IPI:IPI00640598 IPI:IPI00718938 IPI:IPI00719508 IPI:IPI00741204
IPI:IPI00789719 IPI:IPI00941061 IPI:IPI00946867 IPI:IPI01008745
IPI:IPI01008942 IPI:IPI01008945 IPI:IPI01008959 IPI:IPI01014325
RefSeq:NP_036540.3 RefSeq:NP_898868.1 RefSeq:NP_898869.1
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
ProteinModelPortal:Q9ULU4 SMR:Q9ULU4 IntAct:Q9ULU4
MINT:MINT-1183677 STRING:Q9ULU4 PhosphoSite:Q9ULU4 DMDM:25453223
PaxDb:Q9ULU4 PRIDE:Q9ULU4 Ensembl:ENST00000311275
Ensembl:ENST00000352431 Ensembl:ENST00000355972
Ensembl:ENST00000360911 Ensembl:ENST00000461685 GeneID:23613
KEGG:hsa:23613 UCSC:uc002xsu.1 UCSC:uc002xsw.1 UCSC:uc002xsx.1
UCSC:uc002xta.1 UCSC:uc002xtb.1 UCSC:uc002xtc.1 UCSC:uc002xtd.1
UCSC:uc002xte.1 UCSC:uc002xtf.1 UCSC:uc010zya.1 CTD:23613
GeneCards:GC20M045837 H-InvDB:HIX0015888 HGNC:HGNC:9397
HPA:HPA020949 neXtProt:NX_Q9ULU4 PharmGKB:PA162409890
HOVERGEN:HBG031823 GenomeRNAi:23613 NextBio:46322
ArrayExpress:Q9ULU4 Bgee:Q9ULU4 CleanEx:HS_ZMYND8
Genevestigator:Q9ULU4 GermOnline:ENSG00000101040 InterPro:IPR021931
Pfam:PF12064 Uniprot:Q9ULU4
Length = 1186
Score = 155 (59.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 324 PRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDV---DGNGD-ECRI 379
P+ + T K ++ N++ ++ + P + + VDV DG D C +
Sbjct: 34 PQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWV 93
Query: 380 CGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 94 CHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 130
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDV 629
P +K E ST S++ADP V
Sbjct: 641 PVEIK-EELKSTSPASEKADPGAV 663
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 723 SSEESQASEMHKSGNTRKAMSGSISLQAKAFSSTASRFFW 762
S++ S +S K G+TR + S S ++ + FW
Sbjct: 1146 SNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFW 1185
>UNIPROTKB|F1SBF4 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:CU607040
Ensembl:ENSSSCT00000008158 Uniprot:F1SBF4
Length = 931
Score = 142 (55.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 371 DGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
DG D C +C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 59 DGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 105
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 723 SSEESQASEMHKS----GNTRKAMSGSISLQAKAFSSTAS 758
+SEES + KS +T+ +GS+S K FS AS
Sbjct: 439 ASEESM-DFLDKSTASPASTKTGQAGSLSGSPKPFSPQAS 477
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 613 SAMSTGS-VSQQADPSDVTYQSLVDRSSAIDFM---TCTSQISNDGNSGHASSCLSP 665
S++ TGS V Q AD T ++DF+ T + + G +G S P
Sbjct: 416 SSVHTGSDVEQDADKK-ATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKP 471
>UNIPROTKB|G3V661 [details] [associations]
symbol:Baz1b "Bromodomain adjacent to zinc finger domain
protein 1B" species:10116 "Rattus norvegicus" [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0034725
"DNA replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0035173 "histone kinase activity" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071884 "vitamin D
receptor activator activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
SMART:SM00297 RGD:1597089 GO:GO:0046872 GO:GO:0008270 EMBL:CH473973
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 CTD:9031 KO:K11658
OMA:CNKAFHL EMBL:AC090529 RefSeq:NP_001178845.1 UniGene:Rn.7043
Ensembl:ENSRNOT00000001975 GeneID:368002 KEGG:rno:368002
NextBio:691979 Uniprot:G3V661
Length = 1476
Score = 115 (45.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1176 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1228
Score = 73 (30.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDA-ASYGSE 316
F +++ E++ L++ KL IL LC +L + ++ ++ R++ L + A E
Sbjct: 726 FLEKLETSEFFELTSEEKLRILTALCHRILMTYSVQDHMETRQQMSAELWKERLAVLKEE 785
Query: 317 IARRRVHPRFSKTPDCKNRE 336
++R + K + +N+E
Sbjct: 786 NDKKRAEKQKRKEMEARNKE 805
>UNIPROTKB|F1PQV6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:SCTVNCN GeneTree:ENSGT00530000063984
EMBL:AAEX03011503 EMBL:AAEX03011502 Ensembl:ENSCAFT00000014853
Uniprot:F1PQV6
Length = 680
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 457 ENEKTETTFTF-PAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 515
Query: 402 GVSKMYVPEGSWYCPEC 418
+P+G W CP C
Sbjct: 516 DPPLKTIPKGMWICPRC 532
>UNIPROTKB|Q96BD5 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] Reactome:REACT_604
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 SMART:SM00384 EMBL:CH471064
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0007596
GO:GO:0008270 GO:GO:0001967 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 EMBL:AY090777 EMBL:AB051483
EMBL:AK021530 EMBL:AK023258 EMBL:BC015714 EMBL:BX648236
EMBL:AF208848 IPI:IPI00041959 IPI:IPI00054460 IPI:IPI00737174
RefSeq:NP_001095272.1 RefSeq:NP_057705.3 UniGene:Hs.502458 PDB:2PUY
PDB:2YQL PDBsum:2PUY PDBsum:2YQL ProteinModelPortal:Q96BD5
SMR:Q96BD5 IntAct:Q96BD5 MINT:MINT-1469147 STRING:Q96BD5
PhosphoSite:Q96BD5 DMDM:74731224 PaxDb:Q96BD5 PRIDE:Q96BD5
DNASU:51317 Ensembl:ENST00000257821 Ensembl:ENST00000323180
Ensembl:ENST00000418153 GeneID:51317 KEGG:hsa:51317 UCSC:uc001ncb.4
UCSC:uc001ncc.4 UCSC:uc001nce.2 CTD:51317 GeneCards:GC11M045950
HGNC:HGNC:24156 HPA:HPA023580 MIM:608325 neXtProt:NX_Q96BD5
PharmGKB:PA134977844 eggNOG:NOG310379 HOVERGEN:HBG080293
InParanoid:Q96BD5 OMA:SCTVNCN OrthoDB:EOG4KWJSH PhylomeDB:Q96BD5
EvolutionaryTrace:Q96BD5 GenomeRNAi:51317 NextBio:54681
ArrayExpress:Q96BD5 Bgee:Q96BD5 CleanEx:HS_PHF21A
Genevestigator:Q96BD5 GermOnline:ENSG00000135365 Uniprot:Q96BD5
Length = 680
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 457 ENEKTETTFTF-PAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 515
Query: 402 GVSKMYVPEGSWYCPEC 418
+P+G W CP C
Sbjct: 516 DPPLKTIPKGMWICPRC 532
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 138 (53.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 36/118 (30%), Positives = 49/118 (41%)
Query: 301 ESEVGLDPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKG 360
+ + G +P+A S++ VH S PD R R K P
Sbjct: 326 QGDEGPEPEAEE--SDLDSGSVHSA-SGRPDGPVRAKKLKRGRPGRKKKKVLGCPTVTGE 382
Query: 361 TEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
E+D G + D + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 383 EEVD--GYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 437
Score = 137 (53.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 371 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D + + CR+C G LLCCD C S+YH C+ +P G W CP C
Sbjct: 466 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 513
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 102 RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGEQVEGD 161
RRRK + KR K ++ + DG K +V++ ++TL ++ GL EDV E V +
Sbjct: 116 RRRKHRE----KREKKTKRRKRGEGDGGHK-QVEQKSSATLL-LTWGL--EDV-EHVFSE 166
Query: 162 MD 163
D
Sbjct: 167 ED 168
>UNIPROTKB|E9PTL0 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
IPI:IPI00769023 Ensembl:ENSRNOT00000055139 RGD:1309544
ArrayExpress:E9PTL0 Uniprot:E9PTL0
Length = 1073
Score = 147 (56.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 363 MDAPGVDVDGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
+++ D DG D C +C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 51 LNSSSKDQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 105
Score = 37 (18.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 723 SSEESQASEMHKS----GNTRKAMSGSISLQAKAFSSTA 757
+SEES + KS +T+ +GS+S K FS A
Sbjct: 436 ASEESM-DFLDKSTASPASTKTGQAGSLSGSPKPFSPQA 473
>RGD|1560612 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001967
"suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
RGD:1560612 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063984 IPI:IPI00952132
Ensembl:ENSRNOT00000067664 UCSC:RGD:1560612 ArrayExpress:F1M6K4
Uniprot:F1M6K4
Length = 639
Score = 129 (50.5 bits), Expect = 0.00022, P = 0.00022
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 417 ENEKTETTFTF-PAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 475
Query: 402 GVSKMYVPEGSWYCPEC 418
+P+G W CP C
Sbjct: 476 EPPLKTIPKGMWICPRC 492
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 147 (56.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 371 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D + + CR+C G LLCCD CPS+YH C+ +P G W CP C
Sbjct: 413 DDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 460
Score = 44 (20.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 15/59 (25%), Positives = 34/59 (57%)
Query: 74 EDGDCEDLDSSE--LRQFLLNE-NDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGD 129
++G ++L +E L + +E +D+ + +++KKL D K++ K +K + ++ D D
Sbjct: 68 KEGSNDELSENEEDLEEKSESEGSDYSPN-KKKKKKLKDKKEKKA-KRKKKDEDEDDND 124
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1065 IHRHLPSRVMKNIIDIELSQDGKEKYWF 1092
+ +++P++ + I+ +ELSQ K+ Y F
Sbjct: 936 VFKNMPAKT-ELIVRVELSQMQKKYYKF 962
Score = 39 (18.8 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 287 LDSEELRAEIDAREESEVGLDPDAASYGSEIAR--RRVHPRFSKTPDCKNREAVEFNAEN 344
L +EE+ E + EE + GL+ + E ++ P+ K CK + + N
Sbjct: 14 LFAEEMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLKENKCKGKRKKK-EGSN 72
Query: 345 DRM 347
D +
Sbjct: 73 DEL 75
Score = 39 (18.8 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 297 DAREESEVGLDPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPL 356
D E+E L+ + S GS+ + + + K K + + + + D C +P
Sbjct: 73 DELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDEDEDDNDDGCLKEPK 132
Query: 357 GFKGTEMDAPGVD-VD 371
G M G+D VD
Sbjct: 133 S-SGQLMAEWGLDDVD 147
>MGI|MGI:2384756 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001967 "suckling
behavior" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 MGI:MGI:2384756 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001967 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 CTD:51317
eggNOG:NOG310379 HOVERGEN:HBG080293 EMBL:AB105178 EMBL:AK129424
EMBL:AK037174 EMBL:BC019181 EMBL:AY206982 IPI:IPI00124469
IPI:IPI00228265 IPI:IPI00453806 IPI:IPI00742280 IPI:IPI00742299
IPI:IPI00742330 IPI:IPI00742344 IPI:IPI00742352 IPI:IPI00742439
RefSeq:NP_001103161.1 RefSeq:NP_620094.2 UniGene:Mm.330408
ProteinModelPortal:Q6ZPK0 SMR:Q6ZPK0 STRING:Q6ZPK0
PhosphoSite:Q6ZPK0 PRIDE:Q6ZPK0 GeneID:192285 KEGG:mmu:192285
UCSC:uc008kxi.2 HOGENOM:HOG000231466 ChiTaRS:PHF21A NextBio:371282
CleanEx:MM_PHF21A Genevestigator:Q6ZPK0
GermOnline:ENSMUSG00000058318 Uniprot:Q6ZPK0
Length = 659
Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 437 ENEKTETTFTF-PAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 495
Query: 402 GVSKMYVPEGSWYCPEC 418
+P+G W CP C
Sbjct: 496 EPPLKTIPKGMWICPRC 512
>TAIR|locus:2078092 [details] [associations]
symbol:AT3G05670 "AT3G05670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AC011620 HSSP:Q14839
eggNOG:NOG300312 EMBL:AY120751 EMBL:BT002568 IPI:IPI00528739
RefSeq:NP_187218.1 UniGene:At.18633 ProteinModelPortal:Q9M9X2
SMR:Q9M9X2 EnsemblPlants:AT3G05670.1 GeneID:819734
KEGG:ath:AT3G05670 TAIR:At3g05670 HOGENOM:HOG000093083
InParanoid:Q9M9X2 OMA:CKQRFRT ProtClustDB:CLSN2684496
Genevestigator:Q9M9X2 Uniprot:Q9M9X2
Length = 883
Score = 119 (46.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 376 ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
EC DG +L CD C S+ HT C+G+ + VPEG+WYC C
Sbjct: 508 ECHQGDDDGLMLLCDLCDSSAHTYCVGLGRE-VPEGNWYCEGC 549
Score = 63 (27.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/113 (22%), Positives = 48/113 (42%)
Query: 71 VDYEDGDCEDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGDA 130
VD +D D ED + R + D + +R V +++E + ++DGD
Sbjct: 119 VDLDDADDEDDEIRNSRNAVGKSGSLDGEKHQRIGLGKRRRVFYEIEDEDGDYPEEDGDE 178
Query: 131 KSE--VDRIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDS-CEHVRETDAGLE 180
+ E V+ +++++L + G + + V + + D E E D G E
Sbjct: 179 EEERDVENVDSNSLHDGEDGKMALEEQDNVSHETEKEDDGDYEDEDEDDDGDE 231
>MGI|MGI:1353499 [details] [associations]
symbol:Baz1b "bromodomain adjacent to zinc finger domain,
1B" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IDA]
[GO:0003007 "heart morphogenesis" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004713 "protein tyrosine
kinase activity" evidence=ISO] [GO:0004715 "non-membrane spanning
protein tyrosine kinase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005721
"centromeric heterochromatin" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0006333 "chromatin
assembly or disassembly" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016572 "histone
phosphorylation" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=ISO]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=ISO] [GO:0035173 "histone kinase activity" evidence=ISO]
[GO:0042393 "histone binding" evidence=IPI] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=IMP] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0071884 "vitamin D receptor activator activity"
evidence=ISO;IMP] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 MGI:MGI:1353499 GO:GO:0005524
GO:GO:0046872 GO:GO:0003007 GO:GO:0008270 EMBL:CH466529
GO:GO:0006351 GO:GO:0003682 GO:GO:0004715 GO:GO:0004713
GO:GO:0043596 GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0016585 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 CTD:9031 HOVERGEN:HBG050668 KO:K11658
OMA:CNKAFHL OrthoDB:EOG4MKNFK ChiTaRS:BAZ1B GO:GO:0071778
GO:GO:0035173 GO:GO:0071884 GO:GO:0034725 EMBL:AF084480
EMBL:BC141399 EMBL:AK017894 EMBL:AK037737 EMBL:AK137139
EMBL:AK140172 EMBL:AK141305 IPI:IPI00923656 IPI:IPI00930843
PIR:T17401 RefSeq:NP_035844.2 UniGene:Mm.40331
ProteinModelPortal:Q9Z277 SMR:Q9Z277 DIP:DIP-36072N IntAct:Q9Z277
STRING:Q9Z277 PhosphoSite:Q9Z277 PaxDb:Q9Z277 PRIDE:Q9Z277
Ensembl:ENSMUST00000002825 GeneID:22385 KEGG:mmu:22385
UCSC:uc008zxz.2 InParanoid:Q3USR7 NextBio:302753 Bgee:Q9Z277
CleanEx:MM_BAZ1B Genevestigator:Q9Z277
GermOnline:ENSMUSG00000002748 Uniprot:Q9Z277
Length = 1479
Score = 115 (45.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1179 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
Score = 72 (30.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDA-ASYGSE 316
F +++ E++ L++ KL IL LC +L + ++ ++ R++ L + A E
Sbjct: 729 FLEKLETSEFFELTSEEKLRILTALCHRILMTYSVQDHMETRQQVSAELWKERLAVLKEE 788
Query: 317 IARRRVHPRFSKTPDCKNRE 336
++R + K + +N+E
Sbjct: 789 NDKKRAEKQKRKEMEARNKE 808
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 155 (59.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + +G E D D + + CR+C G LLCC
Sbjct: 434 PHCE-KEGIQWEAKEDNSEGEEILEEVGGDPEEED------DHHMEFCRVCKDGGELLCC 486
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 487 DTCPSSYHIHCLNPPLPEIPNGEWLCPRC 515
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 85 ELRQFLLNENDFDADLT---RRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEAST 141
E + L + +D T +++KKL K+S K E+ + D S+ + A
Sbjct: 115 EEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDEDDDDSKEPKSSAQL 174
Query: 142 LSE 144
L +
Sbjct: 175 LED 177
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y R +E+
Sbjct: 1163 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1204
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 132 (51.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINK 422
N D C C G LLCCD CP+A+H +C +S+ +P G W C C + K
Sbjct: 55 NHDICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSGDWMCHRCTVRK 106
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 22/72 (30%), Positives = 30/72 (41%)
Query: 612 ESAMSTGS--VSQQADPSDVTYQSLVDRSSAIDFMTCTSQISNDGNSGHASSCLSPNISF 669
+S + TG+ V Q SD SS+ + + SG SSC PN+S
Sbjct: 601 DSTVCTGAHAVKPQKVTSDAGSNGQRSPSSSCGGKSSLDSVM--AGSGDISSCTEPNMSE 658
Query: 670 LS---KERNHGG 678
LS K+ GG
Sbjct: 659 LSGRIKDIMQGG 670
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 130 (50.8 bits), Expect = 0.00026, P = 0.00026
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINKV 423
N D C C G LLCCD CPS++H +C +S+ +P G W C C ++K+
Sbjct: 52 NHDYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSCRMSKL 104
>UNIPROTKB|H7C4X9 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540
EMBL:AL031666 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:H7C4X9 PRIDE:H7C4X9
Ensembl:ENST00000467200 Uniprot:H7C4X9
Length = 1096
Score = 143 (55.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 368 VDVDGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
V DG D C +C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 8 VPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 57
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDV 629
P +K E ST S++ADP V
Sbjct: 569 PVEIK-EELKSTSPASEKADPGAV 591
Score = 39 (18.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 36/164 (21%), Positives = 63/164 (38%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDVTYQSLVDRSSAIDFMTC-----TSQISNDGNSGHAS 660
P H+K S + Q+AD ++V ++L S T T+ S + +
Sbjct: 938 PEHMK-SCTQSATAPQQEAD-AEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEK 995
Query: 661 SCLSPNISFLSKERNHGGLLGVGTNYAN--KCAFMGSVFKPHSYINQYMHGEFXXXXXXK 718
S S + LS R + +G+N + K + P + +Q H + K
Sbjct: 996 SKESGSTLDLSGSRETPSSILLGSNQGSVSKRCDKQPAYAPTTTDHQ-PHPNYPAQ---K 1051
Query: 719 LAVLSSEESQASEMHKSGNTRKAMSGSISLQAKAFSSTASRFFW 762
S++ S +S K G+TR + S S ++ + FW
Sbjct: 1052 YHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFW 1095
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 143 (55.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 35/113 (30%), Positives = 56/113 (49%)
Query: 307 DPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAP 366
DP +A A++R +F P N + + + + K K KP G +++
Sbjct: 9 DPGSAE---RTAQKR---KFPSPPHSSNGHSPQDTSTSPIKK---KKKP-GL----LNSN 54
Query: 367 GVDVDGNGD-ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
+ DG D C +C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 55 NKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 105
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDV 629
P +K E ST S++ADP V
Sbjct: 578 PVEIK-EELKSTSPASEKADPGAV 600
Score = 39 (18.8 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 36/164 (21%), Positives = 63/164 (38%)
Query: 606 PGHVKMESAMSTGSVSQQADPSDVTYQSLVDRSSAIDFMTC-----TSQISNDGNSGHAS 660
P H+K S + Q+AD ++V ++L S T T+ S + +
Sbjct: 947 PEHMK-SCTQSATAPQQEAD-AEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEK 1004
Query: 661 SCLSPNISFLSKERNHGGLLGVGTNYAN--KCAFMGSVFKPHSYINQYMHGEFXXXXXXK 718
S S + LS R + +G+N + K + P + +Q H + K
Sbjct: 1005 SKESGSTLDLSGSRETPSSILLGSNQGSVSKRCDKQPAYAPTTTDHQ-PHPNYPAQ---K 1060
Query: 719 LAVLSSEESQASEMHKSGNTRKAMSGSISLQAKAFSSTASRFFW 762
S++ S +S K G+TR + S S ++ + FW
Sbjct: 1061 YHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFW 1104
>RGD|1311245 [details] [associations]
symbol:Rsf1 "remodeling and spacing factor 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006334
"nucleosome assembly" evidence=IEA;ISO] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA;ISO] [GO:0031213 "RSF complex" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0043392
"negative regulation of DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050434
"positive regulation of viral transcription" evidence=IEA;ISO]
[GO:0016887 "ATPase activity" evidence=ISO] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
RGD:1311245 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 OrthoDB:EOG441QBQ
GeneTree:ENSGT00530000064411 IPI:IPI00368441
Ensembl:ENSRNOT00000037050 UCSC:RGD:1311245 Uniprot:D3ZGQ8
Length = 1444
Score = 127 (49.8 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 375 DE-CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
DE C+ CG+ +L CD C S YHT C+ M +P+G W+CP C
Sbjct: 895 DEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 942
Score = 63 (27.2 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 26/99 (26%), Positives = 41/99 (41%)
Query: 79 EDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIE 138
+D D S + + N N+ L R ++D L+K S + E + E + + E + E
Sbjct: 185 DDQDGSSWKCIVRNRNELAETLALLRAQIDPVLLKNSSQQEDPSRESPTLEDE-ETKKDE 243
Query: 139 ASTLSEVSCGLTVEDVGEQVEGDMDSSSDSCEHVRETDA 177
+ E S G + E E MDS S + E A
Sbjct: 244 ETPKQEASRG---NEKTEADERSMDSRKRSAANALEGPA 279
Score = 44 (20.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 1109 VDMVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKC 1153
++ +I P ++P E SE Q+++ K ++K + L R + KC
Sbjct: 982 IENIIPP--QEP--EFSEDQEEKKKDAKKSKANVLERRSTRTRKC 1022
Score = 39 (18.8 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 1091 WFPETCLPLFLIKEYEERV-DMVIAPSSKKPSNELSE 1126
WF C L ++ EE++ D+ +A K+ + E
Sbjct: 937 WFCPPCQHKLLCEKLEEQLQDLDVALKKKERAERRKE 973
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 139 (54.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 374 GDECRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAIN 421
G++C CG+D T+L CDGC +AYHT C+ +P+ WYC C N
Sbjct: 268 GEQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKEDWYCDACKFN 318
Score = 47 (21.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 740 KAMSGSISLQAKAFS--STASRFFWPCSERKLWEVPRERCSWCYSCKSPPS 788
K S S+SL + ASR P SE +L ++ C +C+ C+ P S
Sbjct: 1057 KRNSASLSLNDRPGPPMEPASRETSPDSEGRLTIRKKKGCIFCF-CRLPES 1106
>RGD|1306330 [details] [associations]
symbol:Ing1 "inhibitor of growth family, member 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006606 "protein import into nucleus"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010941 "regulation of cell death" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1306330 GO:GO:0005634 GO:GO:0045893 GO:GO:0010941
GO:GO:0046872 GO:GO:0008270 GO:GO:0006606 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:BC086336 IPI:IPI00365368
UniGene:Rn.145491 UniGene:Rn.232052 ProteinModelPortal:Q5RK29
STRING:Q5RK29 UCSC:RGD:1306330 InParanoid:Q5RK29
ArrayExpress:Q5RK29 Genevestigator:Q5RK29 Uniprot:Q5RK29
Length = 102
Score = 102 (41.0 bits), Expect = 0.00036, P = 0.00036
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 346 RMKTSCKAKPLGFKGTEMDAPG-VDVDGNGDECRICGMD--GTLLCCDG--CPSA-YHTR 399
+ KTS K K K +P + +D N +C G ++ CD CP +H
Sbjct: 3 KAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFS 62
Query: 400 CIGVSKMYVPEGSWYCPEC 418
C+G++ + P+G WYCP+C
Sbjct: 63 CVGLN--HKPKGKWYCPKC 79
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 149 (57.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 342 AENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
++N + K+S K K + + DA G + D + D C +C G ++ CD CP AYH C+
Sbjct: 349 SKNKKAKSSKKKKKM-----DEDADGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCL 402
Query: 402 GVSKMYVPEGSWYCPEC 418
PEG+W CP C
Sbjct: 403 DPDMERAPEGTWSCPHC 419
Score = 149 (57.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDE-CRICGMDGTLLC 388
P C+ +E +++ A + S + + G D + D + E CR+C G LLC
Sbjct: 417 PHCE-KEGIQWEAREE----SSEGEEENDDGRRDDGDVEEEDDHHMEFCRVCKDGGELLC 471
Query: 389 CDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
CD CPS+YH C+ +P G W CP C
Sbjct: 472 CDTCPSSYHLHCLNPPLPDIPNGEWICPRC 501
Score = 38 (18.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 TKLISKKAILPHTIIRNA--ARRGGLRK 974
T++ KK +L H ++R ++ G + K
Sbjct: 1195 TQVAKKKMMLTHLVVRPGLGSKAGSMSK 1222
Score = 37 (18.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 1111 MVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEK 1152
++I S P N++ F + K + Y + +E+
Sbjct: 1151 VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEE 1192
>UNIPROTKB|F1NFV8 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0008623 "CHRAC" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 GO:GO:0006261
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 OMA:SSFQNNV GO:GO:0008623
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
EMBL:AADN02003387 EMBL:AADN02003388 EMBL:AADN02003389
IPI:IPI00585200 Ensembl:ENSGALT00000016289 Uniprot:F1NFV8
Length = 1522
Score = 131 (51.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 377 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C++C G +++ CDGC YHT CI +PEG W+CPEC
Sbjct: 1114 CKVCRKKGDAESMVLCDGCDRGYHTYCIRPKLKIIPEGDWFCPEC 1158
Score = 57 (25.1 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 30/120 (25%), Positives = 47/120 (39%)
Query: 257 GFYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDAASYGSE 316
G ++S Y L G K+ IL LC +L R D E+S V + A E
Sbjct: 554 GLLKKLSSTSVYDLLPGEKMKILHALCGKLLTLVSTR---DFIEDS-VDVLRQAKQEFRE 609
Query: 317 IARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDE 376
+ + H + + + R+ E + +K K + L K E P V+V +E
Sbjct: 610 LKAEQ-HRKEREAAAARIRKRKEERLKEQELKMKEKQEKL--KEEEQRNPAVEVSVGEEE 666
Score = 54 (24.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 97 DADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGE 156
+A R RK+ ++ L ++ LK +++K K E R A EVS VGE
Sbjct: 620 EAAAARIRKRKEERLKEQELK-----MKEKQEKLKEEEQRNPAV---EVS-------VGE 664
Query: 157 QVEGDMDSSSDSCEHVR---ETDAGLEAE 182
+ D+D+S++S E+ R E D E E
Sbjct: 665 EEREDLDTSTESKENERKEPEVDTVTEDE 693
Score = 46 (21.3 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 79 EDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKN--EKSNLEKKDGDAKSEVDR 136
ED+ + + L +A R+R+K D K LK E+ +++K+ + ++++
Sbjct: 274 EDMQAMAFEKARLKREKANALEARKREKEDKEKKKEELKKIVEEERMKRKEEKERLKIEK 333
Score = 44 (20.5 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 157 QVEGDMDSSSDSCEHVRETDAGL 179
Q G D++ D+C +R ++ GL
Sbjct: 533 QKRGGFDATDDACMELRLSNPGL 555
>TAIR|locus:2047630 [details] [associations]
symbol:AT2G19260 "AT2G19260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR011124
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51050
SMART:SM00249 EMBL:CP002685 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00526938
RefSeq:NP_179516.2 UniGene:At.39870 ProteinModelPortal:F4ISG1
SMR:F4ISG1 PRIDE:F4ISG1 EnsemblPlants:AT2G19260.1 GeneID:816443
KEGG:ath:AT2G19260 OMA:NCLVYSR Uniprot:F4ISG1
Length = 631
Score = 133 (51.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 33/107 (30%), Positives = 45/107 (42%)
Query: 331 DCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGD---ECRICGMDGT-- 385
D N + ++ TS K++ ++ D DG+ +C+ C GT
Sbjct: 363 DGTNDSCSSLKSSSEVNSTSSKSREDDCYSSDSGVSETDTDGSSSPFRQCKHCDKPGTVE 422
Query: 386 -LLCCDGCPSAYHTRCIGVSKMYVPE-GSWYCPECAINKVGPIVTIG 430
+L CD C AYHTRC GV V E W CP C N+ T G
Sbjct: 423 KMLICDECEEAYHTRCCGVQMKDVAEIDEWLCPSCLKNQSSKTKTKG 469
Score = 42 (19.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 101 TRRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLT 150
T+R+ + ++ LV K + G+ D ++ + +SE CG T
Sbjct: 135 TKRKNRFNNCLVYSRKKRRGESSCTFTGETTIRGDGLDDAFVSEHDCGET 184
>UNIPROTKB|F1P5W9 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=IEA]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=IEA] [GO:0035173 "histone kinase activity" evidence=IEA]
[GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071884 "vitamin D
receptor activator activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0004713 GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
OMA:CNKAFHL GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:AADN02026113 EMBL:AADN02026114 IPI:IPI00820657
Ensembl:ENSGALT00000040681 ArrayExpress:F1P5W9 Uniprot:F1P5W9
Length = 1488
Score = 114 (45.2 bits), Expect = 0.00050, Sum P(4) = 0.00050
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + +P+G W CP C
Sbjct: 1178 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEIPDGEWQCPAC 1230
Score = 71 (30.1 bits), Expect = 0.00050, Sum P(4) = 0.00050
Identities = 16/79 (20%), Positives = 40/79 (50%)
Query: 258 FYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEIDAREESEVGLDPDAASYGSEI 317
F +++ E++ L+ KL IL LC +L + ++ ++A++++ L + + E
Sbjct: 725 FLEKLETSEFFELTPEEKLQILGALCHRILMTYSVQDHVEAKQQASAELWKERLAILKEE 784
Query: 318 ARRRVHPRFSKTPDCKNRE 336
++ + + + KN+E
Sbjct: 785 NDKKRAEKQKRKENAKNKE 803
Score = 54 (24.1 bits), Expect = 0.00050, Sum P(4) = 0.00050
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 100 LTRRRKKLDDWLVKRSL-KNEKSNLEKKDGDAKSEVDRIEASTLSEVSCGLTVEDVGEQV 158
L ++R+KL + L +R+ + EK EK + + + E ++ L T E + +
Sbjct: 543 LKKKREKLKEKLKERAKERKEKEMKEKLEKNKRFEDQDLKGKNLPTFKLVDTPEGLPNTL 602
Query: 159 EGDMDSSSD--SC-EHVRETDAGLEAETXXXXXXXXXXSSGTIALMRVLRRHLETLSSDG 215
GD+ + SC + DA G + L RVL L+TL D
Sbjct: 603 FGDVAMVVEFLSCYSGLLMPDAQYPITAVSLMEALCAEKGGFLYLNRVLVILLQTLLQD- 661
Query: 216 SELASN 221
E+A +
Sbjct: 662 -EIAED 666
Score = 38 (18.4 bits), Expect = 0.00050, Sum P(4) = 0.00050
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 1024 RPEQNLQDGKGPETEAFAFRNAIICDKKIVENK 1056
R +Q+L +GP A +A I D+ +++ +
Sbjct: 1306 RKKQSLHPARGPRQRAAPVNSADI-DELVLQTR 1337
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 143 (55.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 37/118 (31%), Positives = 50/118 (42%)
Query: 301 ESEVGLDPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKG 360
+S+ G +P+A S++ VH S PD R R K P G
Sbjct: 312 QSDEGPEPEAEE--SDLDSGSVHSA-SGRPDGPVRTKKLKRGRPGRKKKKVLGCP-AVAG 367
Query: 361 TEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
E + G + D + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 368 EE-EVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 43 (20.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 114 RSLKNEKSNLEKK-DGDA-KSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMD 163
R K +K+ KK +GD + +V++ ++TL ++ GL EDV E V + D
Sbjct: 108 REKKEKKTKRRKKGEGDGGQKQVEQKSSATLL-LTWGL--EDV-EHVFSEED 155
>ZFIN|ZDB-GENE-030131-5913 [details] [associations]
symbol:trim24 "tripartite motif-containing 24"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5913 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AY598454
IPI:IPI00483547 UniGene:Dr.16482 ProteinModelPortal:Q6E2N2
SMR:Q6E2N2 HOVERGEN:HBG097569 ArrayExpress:Q6E2N2 Uniprot:Q6E2N2
Length = 961
Score = 136 (52.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 23/53 (43%), Positives = 26/53 (49%)
Query: 366 PGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
P D D N D C +C G L+CCD CP +H C S P G WYC C
Sbjct: 689 PEADEDPNEDWCAVCQNGGELICCDKCPKVFHLSCHVPSLTASPSGEWYCTLC 741
Score = 43 (20.2 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 107 LDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIEASTLSEVSC 147
LD++ VK S++ S +EK S D EAS V C
Sbjct: 111 LDNFFVKDSVEVPSSTMEKSCQLCMSCDDNTEASGFC-VEC 150
>POMBASE|SPAC2F7.07c [details] [associations]
symbol:cph2 "Clr6 histone deacetylase associated PHD
protein-2 Cph2" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0032221 "Rpd3S complex"
evidence=IDA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 PomBase:SPAC2F7.07c EMBL:CU329670
GO:GO:0005819 GO:GO:0046872 GO:GO:0008270 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 eggNOG:NOG145066 OrthoDB:EOG4TQQJV
PIR:T38555 RefSeq:NP_592978.1 ProteinModelPortal:Q09698
DIP:DIP-29347N STRING:Q09698 EnsemblFungi:SPAC2F7.07c.1
GeneID:2541422 KEGG:spo:SPAC2F7.07c NextBio:20802526 Uniprot:Q09698
Length = 607
Score = 125 (49.1 bits), Expect = 0.00056, P = 0.00056
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPEC 418
N D C C G LCC+ CP+++H CI + + +P+ +WYC EC
Sbjct: 262 NNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNEC 309
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 131 (51.2 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
N D C CG G LLCCD C +++H C+ +P G W+C C K
Sbjct: 60 NDDYCSGCGDGGDLLCCDNCQASFHLICLNPPLNEIPSGDWFCDSCTYKK 109
Score = 47 (21.6 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 685 NYANKCAFMGSVFKP--HSYINQYMHGEF 711
N N C+F+ S+F+ H+ N + + E+
Sbjct: 344 NKNNNCSFISSLFQKSSHNVDNNFKNSEY 372
Score = 46 (21.3 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 18/94 (19%), Positives = 41/94 (43%)
Query: 1109 VDMVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCR--RDKIEKCACASCQIDVLLGN 1166
+++V + SS+ P++ + ++ K++ ++ + + + +K C SC+ +
Sbjct: 151 INLVDSLSSRNPTS--FQLPREYTKSNNNNINNKFIKNIIKTSSKKKGCQSCKDSSNQTD 208
Query: 1167 AVKCGTCQGMLITNLSVFCFRDVLGFPVVYLRFY 1200
V+C C T FC P++Y Y
Sbjct: 209 IVQCNRCNSCFHT----FCLEP----PLIYKPSY 234
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 142 (55.0 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 341 NAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRC 400
+ E + ++ K + ++ E + + D + + CR+C G LLCCD C S+YH C
Sbjct: 421 HCEKEGVQWEAKEEEEEYEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHC 480
Query: 401 IGVSKMYVPEGSWYCPEC 418
+ +P G W CP C
Sbjct: 481 LNPPLPDIPNGEWLCPRC 498
Score = 142 (55.0 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 37/118 (31%), Positives = 50/118 (42%)
Query: 301 ESEVGLDPDAASYGSEIARRRVHPRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKG 360
+S+ G +P+A S++ VH S PD R R K P
Sbjct: 311 QSDEGPEPEAEE--SDLDSGSVHSA-SGRPDGPVRTKKLKRGRPGRKKRKVLGCPTVAGE 367
Query: 361 TEMDAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
E+D G + D + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 368 EEVD--GYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 422
Score = 43 (20.2 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 114 RSLKNEKSNLEKK-DGDA-KSEVDRIEASTLSEVSCGLTVEDVGEQVEGDMD 163
R K +K+ KK +GD + +V++ ++TL ++ GL EDV E V + D
Sbjct: 107 REKKEKKTKRRKKGEGDGGQKQVEQKSSATLL-LTWGL--EDV-EHVFSEED 154
>UNIPROTKB|F1STY8 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
GeneTree:ENSGT00530000064411 EMBL:CU633553 EMBL:CU915366
Ensembl:ENSSSCT00000016236 Uniprot:F1STY8
Length = 1344
Score = 133 (51.9 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 36/139 (25%), Positives = 67/139 (48%)
Query: 284 DDVLDSEELRAEIDAREESEVGLDPDAASYGSEIARR-RVHPRFSKTPDCKNREAVEFNA 342
+D L+ E + ++E+ +D D + +++ + +V S+T + + +
Sbjct: 708 EDELEEESAPLQKTDKKENLKKIDKDTNAKVTKVKPKGKVRWTGSRTRGRWKYSSNDESE 767
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDG---TLLCCDGCPSAYHTR 399
+D K+S ++ K +E +A D D + C+ CG+ +L CD C S YHT
Sbjct: 768 GSDSEKSSAASEEEEEKESE-EAILADDD---EPCKKCGLPNHPELILLCDSCDSGYHTA 823
Query: 400 CIGVSKMYVPEGSWYCPEC 418
C+ M +P+G W+CP C
Sbjct: 824 CLRPPLMIIPDGEWFCPPC 842
Score = 56 (24.8 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 25/108 (23%), Positives = 46/108 (42%)
Query: 79 EDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEK---KDGDAKSEVD 135
+D D S + + N N+ L + ++D L+K S + + S+ E +D + K E +
Sbjct: 94 DDQDGSSWKCIVRNRNELAETLALLKAQIDPVLLKNSSQQDNSSRESPSLEDEETKKEEE 153
Query: 136 RIEASTLSEVSCGLTVEDVGEQVEGDMDSSSDSCEH-VRETDAGLEAE 182
+ E + + E +DS + S + V ET +E E
Sbjct: 154 TPKQEEQKE-------NEKTKSEEQPIDSENCSTPNAVEETTVKIEKE 194
Score = 40 (19.1 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 1109 VDMVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKC 1153
++ +I P ++P + SE +++ K S+K + L R + KC
Sbjct: 882 IENIIPP--QEP--DFSEDHEEKKKDSKKSKVNLLERRSTRTRKC 922
Score = 39 (18.8 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 1091 WFPETCLPLFLIKEYEERV-DMVIAPSSKKPSNELSE 1126
WF C L ++ EE++ D+ +A K+ + E
Sbjct: 837 WFCPPCQHKLLCEKLEEQLQDLDVALKKKERAERRKE 873
>UNIPROTKB|I3LF49 [details] [associations]
symbol:I3LF49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000030965
Uniprot:I3LF49
Length = 591
Score = 124 (48.7 bits), Expect = 0.00069, P = 0.00069
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 364 DAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D D D N D C +C G LLCC+ CP +H C + + P G W C C
Sbjct: 358 DGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 412
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 153 (58.9 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 330 PDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGDECRICGMDGTLLCC 389
P C+ +E +++ A+ D + + + + + DA D D + + CR+C G LLCC
Sbjct: 382 PHCE-KEGIQWEAKED----NSEGEEI-LEDVVGDAEEED-DHHMEFCRVCKDGGELLCC 434
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D CPS+YH C+ +P G W CP C
Sbjct: 435 DACPSSYHIHCLNPPLPEIPNGEWLCPRC 463
Score = 42 (19.8 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 93 ENDFDADLTRRRKKLDDWLVKRSLKNEK---SNLEKKDGDAKSEV 134
E+DFD D + + D RS ++ K + +KK G+ S V
Sbjct: 287 ESDFD-DASINSYSVSDGSTSRSSRSRKKLKAGKKKKKGEEDSTV 330
Score = 42 (19.8 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 75 DGDCEDLDSSELRQFLLNENDFDADLT---RRRKKLDDWLVKRSL--KNEKSNLEKKDGD 129
D E + E + +L + +D T +++KKL K+S + E+ + E++D D
Sbjct: 54 DSSGEGNEFVEEEEEVLRSDSEGSDYTPGKKKKKKLGPKKEKKSKAKRKEEEDEEEEDDD 113
Query: 130 AK 131
+K
Sbjct: 114 SK 115
Score = 38 (18.4 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 948 STKLISKKAILPHTIIR-NAARRGGLRK 974
S+++ K+ +L H ++R ++ G + K
Sbjct: 1155 SSQVAQKEMMLTHLVVRPGGSKTGSMSK 1182
>UNIPROTKB|F1M5S0 [details] [associations]
symbol:RGD1560612 "Protein RGD1560612" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 IPI:IPI00947688
Ensembl:ENSRNOT00000066219 ArrayExpress:F1M5S0 Uniprot:F1M5S0
Length = 573
Score = 123 (48.4 bits), Expect = 0.00085, P = 0.00085
Identities = 22/61 (36%), Positives = 29/61 (47%)
Query: 359 KGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPE 417
K + +P D D + D C +C G LL CD C YH C+ +P+G W CP
Sbjct: 366 KPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPR 425
Query: 418 C 418
C
Sbjct: 426 C 426
>UNIPROTKB|F1MLK1 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
EMBL:DAAA02062726 EMBL:DAAA02062727 IPI:IPI00924309
Ensembl:ENSBTAT00000061202 GeneTree:ENSGT00530000064411
Uniprot:F1MLK1
Length = 1355
Score = 129 (50.5 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 290 EELRAEIDAREESEVGLDPDAASYGSEIARRRVHPRFS-KTPDCKNREAVEFNAENDRMK 348
EE A + ++ E L S++A+ V P+ + + R ++++ ND +
Sbjct: 724 EEESAALQKTDKKE-NLKKAEKDTNSKVAK--VKPKGKVRWTGSRTRGRWKYSS-NDESE 779
Query: 349 TSCKAKPLGFKGTEMDAPGVD-VDGNGDE-CRICGMDG---TLLCCDGCPSAYHTRCIGV 403
S K E + + + + DE C+ CG+ +L CD C S YHT C+
Sbjct: 780 GSDSEKSSAASEEEEEKESEEAILADDDEPCKKCGLPNHPELILLCDSCDSGYHTACLRP 839
Query: 404 SKMYVPEGSWYCPEC 418
M +P+G W+CP C
Sbjct: 840 PLMIIPDGEWFCPPC 854
Score = 60 (26.2 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 24/105 (22%), Positives = 46/105 (43%)
Query: 79 EDLDSSELRQFLLNENDFDADLTRRRKKLDDWLVKRSLKNEKSNLEKKDGDAKSEVDRIE 138
+D D S + + N N+ L + ++D L+K S + + S+ E + + E + E
Sbjct: 107 DDQDGSSWKCIVRNRNELAETLALLKAQIDPVLLKNSSQQDSSSRESPSLE-EEETKKEE 165
Query: 139 ASTLSEVSCGLTVEDVGEQ-VEGDMDSSSDSCEHVRETDAGLEAE 182
+T E G E+ ++ + S+ + E ET +E E
Sbjct: 166 ETTKQEEQKGSAKMKSEERPIDSEKCSTPSALE---ETTVKIEKE 207
Score = 39 (18.8 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 1091 WFPETCLPLFLIKEYEERV-DMVIAPSSKKPSNELSE 1126
WF C L ++ EE++ D+ +A K+ + E
Sbjct: 849 WFCPPCQHKLLCEKLEEQLQDLDVALKKKERAERRKE 885
Score = 39 (18.8 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 1109 VDMVIAPSSKKPSNELSEFQKKQLKASRKDLFSYLVCRRDKIEKC 1153
++ +I P ++P + SE +++ K S+K + L R + KC
Sbjct: 894 IENIIPP--QEP--DFSEDHEEKKKDSKKSKANLLERRSTRTRKC 934
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1236 1188 0.00096 123 3 11 22 0.39 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 121
No. of states in DFA: 632 (67 KB)
Total size of DFA: 562 KB (2254 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 100.56u 0.11s 100.67t Elapsed: 00:00:05
Total cpu time: 100.58u 0.12s 100.70t Elapsed: 00:00:05
Start: Mon May 20 16:24:26 2013 End: Mon May 20 16:24:31 2013
WARNINGS ISSUED: 1