BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000891
(1236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 419
CR+C G LLCCD CPSAYHT C+ +P+G W CP C+
Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 378 DYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 322 VHPRFSKTPDCK------NREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGD 375
+ P K P+ K +E +++ A+ D + + +G E D D + +
Sbjct: 390 LDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEED------DHHME 443
Query: 376 ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 419
CR+C G LLCCD CPS+YH C+ +P G W CP C
Sbjct: 444 FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 370 VDG----NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
VDG + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 355 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 322 VHPRFSKTPDCK------NREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGD 375
+ P K P+ K +E +++ A+ D + + +G E D D + +
Sbjct: 397 LDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDLEEED------DHHME 450
Query: 376 ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 419
CR+C G LLCCD CPS+YH C+ +P G W CP C
Sbjct: 451 FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 370 VDG----NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
VDG + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 362 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 33/67 (49%)
Query: 372 GNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGT 431
N D CRIC +L CD CPS+YH CI +PEG W CP C I + +
Sbjct: 326 ANMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEKIL 385
Query: 432 SLRGAEL 438
S R E+
Sbjct: 386 SWRWKEI 392
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 367 GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPI 426
GV + + + C +C DG L+ CD C AYH CI + PEG W CP C + GP
Sbjct: 258 GVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHC--EEHGPD 315
Query: 427 VTI 429
V I
Sbjct: 316 VLI 318
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 419
CR+C G LLCCD CPS+YH C+ +P G W CP C
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 364 DAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D G + D + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 334 DGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1
SV=2
Length = 1186
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 324 PRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDV---DGNGD-ECRI 379
P+ + T K ++ N++ ++ + P + + VDV DG D C +
Sbjct: 34 PQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWV 93
Query: 380 CGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 94 CHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 130
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 25/46 (54%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N D C C DG LL CD CP AYHT CI + PEG W C C
Sbjct: 255 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 300
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVP-EGSWYCPECAINK 422
N + C+IC LL CD C ++H CI VP E +W CP C K
Sbjct: 316 NDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVK 366
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C++C G LLCCD CPS YH C+ +P+G W CP C
Sbjct: 38 CKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C +C G+LLCCD CP+A+H C+ + +PEG+WYC +C K
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLNID---IPEGNWYCNDCKAGK 1650
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 375 DECRICGMDGTLLCCD--GCPSAYHTRCIGVSKMYVPEGSWYCP 416
DEC CG G L+ C GCP YH C+ ++K P G W CP
Sbjct: 2017 DECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKR--PAGKWECP 2058
Score = 35.0 bits (79), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 377 CRICGMDGTLLCCDG-CPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C+ C G LL C+ C A+H C+G+ +M P G + C EC
Sbjct: 1444 CQNCEKLGELLLCEAQCCGAFHLECLGLPEM--PRGKFICNEC 1484
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C +C G+LLCCD CP+A+H C+ + +PEG+WYC +C K
Sbjct: 1710 CFVCSEGGSLLCCDSCPAAFHRECLNID---IPEGNWYCNDCKAGK 1752
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 375 DECRICGMDGTLLCCD--GCPSAYHTRCIGVSKMYVPEGSWYCP--ECAI 420
DEC CG G L+ C GCP YH C+ ++K P G W CP +C I
Sbjct: 2119 DECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKR--PAGKWECPWHQCDI 2166
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 377 CRICGMDGTLLCCDG-CPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C+ C G LL C+ C A+H C+G+++M P G + C EC
Sbjct: 1546 CQNCEKLGELLLCEAQCCGAFHLECLGLTEM--PRGKFICNEC 1586
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 377 CRICGMD---GTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C++CG+D ++L CD C + YHT C+ + +P+G+WYCP C I K
Sbjct: 1290 CKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIAK 1338
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 360 GTEMDAPGVDVDGNGDECRICGMDGTL---LCCDGCPSAYHTRCIGVSKMYVPEGSWYCP 416
G + P D D + C CG ++ + CD C +H C+ P W C
Sbjct: 72 GAPAEVPEPDRDAS---CGACGRPESIELVVVCDACERGFHMSCVNDGVEAAPSADWMCS 128
Query: 417 EC 418
+C
Sbjct: 129 DC 130
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 374 GDECRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAIN 421
G++C CG+D T+L CDGC +AYHT C+ +P+ WYC C N
Sbjct: 268 GEQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKEDWYCDACKFN 318
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N DEC +C G L+CCDGCP A+H C+ +P G+W C C
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 371 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D + + CR+C G LLCCD C S+YH C+ +P G W CP C
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 346 RMKTSCKAKPLGFKGTEMDAPGV----DVDG----NGDECRICGMDGTLLCCDGCPSAYH 397
R K + +P K + P V +VDG + D C +C G ++ CD CP AYH
Sbjct: 343 RTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYH 402
Query: 398 TRCIGVSKMYVPEGSWYCPEC 418
C+ PEG W CP C
Sbjct: 403 LVCLDPELDRAPEGKWSCPHC 423
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 434
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 391 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 450
Query: 435 G------AELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYN 472
E G D R + L++ + N E+ I YY+
Sbjct: 451 KNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYS 495
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 953 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1001
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1842 SKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1901
Query: 1002 TVSQLALQVRYIDLHVRWSELV 1023
+++ ++L +R + +RW ++
Sbjct: 1902 SLAGVSLMLRLLWASLRWDDMA 1923
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKV 423
N DEC +C G L+CCDGCP A+H C+ +P G W C C +V
Sbjct: 297 NEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGRV 347
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 375 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIV 427
D CR+C G LLCC+ CP+ YH C+ VP W C C +KV +V
Sbjct: 340 DHCRVCHRLGDLLCCETCPAVYHLECVDPPMNDVPTEDWQCGLCRSHKVSGVV 392
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 387 LCCDGCPSAYHTRCIGVSKM---YVPEGSWYCPEC 418
+CCD C +H RC+G+ + ++ E + CPEC
Sbjct: 2511 ICCDKCQDWFHGRCVGILQSEAEFIDE--YVCPEC 2543
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCI--GVSKMYVPEGSWYCPECAINKVGP 425
N D C CG G +CC+GCP ++H C+ ++ +PEGSW+C C+I P
Sbjct: 116 NVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSHHP 170
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 377 CRICGM---DGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPI 426
C +CG + LL CDGC + YH C+ VP W+CPECA+ V P
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAVPGVDPT 243
>sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1
Length = 684
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAI 420
N D C C G+ LCCD CP ++H C+ + +P+G W+C EC
Sbjct: 259 NEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNECKF 308
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 377 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C+IC G ++ CDGC +HT C+ VPEG W+CPEC
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPEC 1195
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 341 NAENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTR 399
+ EN++ +T+ P + + +P D D + D C +C G LL CD C YH
Sbjct: 455 SPENEKTETTFTF-PAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLD 513
Query: 400 CIGVSKMYVPEGSWYCPEC 418
C+ +P+G W CP C
Sbjct: 514 CLDPPLKTIPKGMWICPRC 532
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 377 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C++C G +++ CDGC +H C+ YVPEG W+CPEC
Sbjct: 225 CKVCRKKGDGESMVLCDGCDRGHHIYCVRPKLKYVPEGDWFCPEC 269
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 343 ENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 401
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 437 ENEKTETTFTF-PAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 495
Query: 402 GVSKMYVPEGSWYCPEC 418
+P+G W CP C
Sbjct: 496 EPPLKTIPKGMWICPRC 512
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1
PE=1 SV=2
Length = 1365
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C +C G+LLCC+ CP+A+H C+ + +P+GSW+C +C K
Sbjct: 834 CFVCSKGGSLLCCEACPAAFHPDCLNIE---MPDGSWFCNDCRAGK 876
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 377 CRICGMDGTLLCCDG-CPSAYHTRCIGVSKMYVPEGSWYCPECA 419
C++C G+LL C+G C A+H C+G+S+ PEG + C ECA
Sbjct: 670 CQLCEKTGSLLLCEGPCCGAFHLACLGLSRR--PEGRFTCTECA 711
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 375 DECRICGMDGTLLCCDG--CPSAYHTRCIGVSKMYVPEGSWYCP 416
DEC CG G L+ CD C AYH C+G+ K P G W CP
Sbjct: 1240 DECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKR--PFGKWECP 1281
>sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2
Length = 1441
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 377 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C+ CG+ +L CD C S YHT C+ M +P+G W+CP C
Sbjct: 894 CKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 938
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 377 CRICGM---DGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGP 425
C +CG + LL CDGC + YH C+ VP W+CPEC + V P
Sbjct: 188 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECTVPGVDP 239
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 377 CRICG---MDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSL 433
C IC ++ ++L CDGC +YHT C+ +P+G W CP C + +V
Sbjct: 451 CHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVS--------- 501
Query: 434 RGAELFGIDLYERVF 448
+ E FG + ER +
Sbjct: 502 KPQEAFGFEQAEREY 516
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1
PE=1 SV=1
Length = 1365
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 377 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 422
C +C G+LLCC+ CP+A+H C+ + +P+GSW+C +C K
Sbjct: 834 CFVCSKGGSLLCCESCPAAFHPDCLNIE---MPDGSWFCNDCRAGK 876
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 377 CRICGMDGTLLCCDG-CPSAYHTRCIGVSKMYVPEGSWYCPECA 419
C++C G+LL C+G C A+H C+G+S+ PEG + C ECA
Sbjct: 670 CQLCEKPGSLLLCEGPCCGAFHLACLGLSRR--PEGRFTCSECA 711
Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 375 DECRICGMDGTLLCCDG--CPSAYHTRCIGVSKMYVPEGSWYCP 416
DEC CG G L+ CD C AYH C+G+ K P G W CP
Sbjct: 1240 DECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKR--PFGKWECP 1281
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 377 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
C+IC G ++ CDGC +HT C+ VP+G W+CPEC
Sbjct: 1152 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKAVPDGDWFCPEC 1196
>sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2
Length = 1004
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINK 422
N D C C G LLCCD CP+A+H +C +S+ +P G W C C + +
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
>sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=Phf12 PE=2 SV=1
Length = 1003
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINK 422
N D C C G LLCCD CP+A+H +C +S+ +P G W C C + +
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
>sp|Q09698|YA27_SCHPO Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.07c PE=4 SV=1
Length = 607
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPEC 418
N D C C G LCC+ CP+++H CI + + +P+ +WYC EC
Sbjct: 262 NNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNEC 309
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 377 CRICGM---DGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKV 423
C +CG + LL CDGC + YH C+ VP W+CPECA V
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGV 235
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 364 DAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D D D N D C +C G LLCC+ CP +H C + + P G W C C
Sbjct: 877 DGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 931
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 364 DAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D D D N D C +C G LLCC+ CP +H C + + P G W C C
Sbjct: 892 DGNSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 946
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2
SV=1
Length = 1163
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%)
Query: 367 GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
G + D N D C +C G LLCCD CP +H C + P G W C C
Sbjct: 914 GKEDDPNEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFC 965
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1179 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1179 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 49/122 (40%), Gaps = 21/122 (17%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYC--------PE----CAI 420
N D C +C G LLCCD CP YH C + + P G W C PE C
Sbjct: 995 NEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPEMEYDCEN 1054
Query: 421 NKVG-PIVTIGTSLRGAELFGIDLYERVFLGTCNHLLVLNASSNTEQYIRYY-----NPI 474
+ G P V + L G ++ E++ L C + L L R+Y P+
Sbjct: 1055 ARYGHPGVRV---LPGLSMYDQKKCEKLVLSLCCNSLSLPFHEPVSPLARHYYQIIKRPM 1111
Query: 475 DI 476
D+
Sbjct: 1112 DL 1113
>sp|A2BIL7|BAZ1B_DANRE Tyrosine-protein kinase BAZ1B OS=Danio rerio GN=baz1b PE=1 SV=2
Length = 1536
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ + +P G W CP C
Sbjct: 1197 DMSAENARCKVCRRKGEDDKLILCDECNKAFHLFCLRPALYRIPAGEWLCPAC 1249
>sp|Q12311|NTO1_YEAST NuA3 HAT complex component NTO1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NTO1 PE=1 SV=1
Length = 748
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 364 DAPGVDVDGNGDECRIC-GMD----GTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D G+ +D C +C G D T++ CDGC A H C G+ +++PEG W C C
Sbjct: 256 DGTGLSMD---QACAVCLGTDSDNLNTIVFCDGCDIAVHQECYGI--IFIPEGKWLCRRC 310
Query: 419 AINK 422
I+K
Sbjct: 311 MISK 314
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 343 ENDR-MKTSCKAKPLGFKGTEMDAPGVDVDGNGDE---------CRICGM---DGTLLCC 389
EN++ MK++ K +P K E+++ + C +CG + LL C
Sbjct: 268 ENEKEMKSTIKQEPTEKKDCELESEKEKPKSRAKKTATAVDLYVCLLCGSGNDEDRLLLC 327
Query: 390 DGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
DGC +YHT C+ VP+G W CP+C
Sbjct: 328 DGCDDSYHTFCLVPPLHDVPKGDWRCPKC 356
Score = 33.9 bits (76), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 376 ECRICGMDGT----LLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGT 431
E ++C T ++ C+ C A+HT C+ + W CP C ++ P+ I
Sbjct: 1175 EMKVCLCQKTPATPMIQCELCRDAFHTSCVAAPSISQSSRIWLCPHCRRSEKPPLEKILP 1234
Query: 432 SLRGAELFGIDLYE 445
L + + L E
Sbjct: 1235 LLASLQRIRVRLPE 1248
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 369 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D+ C++C G D L+ CD C A+H C+ +P+G W CP C
Sbjct: 1146 DMSSENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPVLFNIPDGEWLCPAC 1198
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 371 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D N D C +C G LLCC+ CP +H C + P G W C C
Sbjct: 823 DPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFC 870
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 371 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
D N D C +C G LLCC+ CP +H C + P G W C C
Sbjct: 824 DPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFC 871
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 21/102 (20%)
Query: 329 TPDCKNREAVEFNAENDRMKTSCKAKPLGFKG----TEMDAPGVDVDGNGDE-----CRI 379
TP C+N + MK+S K +P+ K E + P + C +
Sbjct: 264 TPKCENEK---------EMKSSIKQEPIERKDYIVENEKEKPKSRSKKATNAVDLYVCLL 314
Query: 380 CGM---DGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
CG + LL CDGC +YHT C+ VP+G W CP+C
Sbjct: 315 CGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC 356
Score = 33.9 bits (76), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 384 GTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLRGAELFGIDL 443
++ C+ C A+HT C+ V + W CP C ++ P+ I L + + L
Sbjct: 1187 APMIQCELCRDAFHTSCVAVPSISQGLRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRL 1246
Query: 444 YE 445
E
Sbjct: 1247 PE 1248
>sp|O94400|YQF7_SCHPO PHD and RING finger domain-containing protein C126.07c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC126.07c PE=4 SV=1
Length = 571
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 352 KAKPLGFKGTEMDAPGVDVDGNGDE---CRICGMDG---TLLCCDGCPSAYHTRCIGVSK 405
+A P+ K + G + G E C ICG LL CDGC AYHT C+ +
Sbjct: 97 RAYPVEEKTQSVANAGEPFEDEGSETCRCVICGRSDHAEVLLLCDGCDDAYHTYCLNMDA 156
Query: 406 MYVPEGSWYCPECAI 420
VP +YCP C +
Sbjct: 157 --VPIEEFYCPNCVL 169
>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66 PE=2
SV=4
Length = 1216
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N D C +C G LLCCD CP +H C + + P G W C C
Sbjct: 969 NEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 1014
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 373 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 418
N D C +C G LLCC+ CP +H C + + P G W C C
Sbjct: 849 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFC 894
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 454,371,703
Number of Sequences: 539616
Number of extensions: 19329166
Number of successful extensions: 54502
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 53996
Number of HSP's gapped (non-prelim): 570
length of query: 1236
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1107
effective length of database: 121,958,995
effective search space: 135008607465
effective search space used: 135008607465
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)