Query 000893
Match_columns 1236
No_of_seqs 420 out of 2404
Neff 4.0
Searched_HMMs 29240
Date Tue Mar 26 21:16:13 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/000893.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_27-30//hhsearch_pdb/000893hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h8h_A Proto-oncogene tyrosine 1.0 1 1 326.0 13.7 325 844-1228 105-441 (535)
2 1opk_A P150, C-ABL, proto-onco 1.0 1 1 324.5 15.5 326 845-1228 64-396 (495)
3 1qcf_A Haematopoetic cell kina 1.0 1 1 321.2 16.9 324 844-1229 28-363 (454)
4 1fmk_A C-SRC, P60-SRC, tyrosin 1.0 1 1 317.9 14.0 325 844-1228 22-358 (452)
5 1k9a_A Carboxyl-terminal SRC k 1.0 1 1 316.1 16.5 324 845-1229 32-364 (450)
6 4b9d_A Serine/threonine-protei 1.0 1 1 306.1 16.6 181 1039-1231 21-205 (350)
7 3cbl_A C-FES, proto-oncogene t 1.0 1 1 303.3 15.6 281 887-1227 6-291 (377)
8 4fie_A Serine/threonine-protei 1.0 1 1 302.7 16.3 176 1042-1233 151-329 (423)
9 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 302.5 14.6 182 1040-1233 30-216 (311)
10 4fih_A Serine/threonine-protei 1.0 1 1 301.2 15.5 176 1042-1233 74-252 (346)
No 1
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=1.00 E-value=1 Score=326.03 Aligned_cols=325 Identities=25% Similarity=0.362 Sum_probs=238.5
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC--
Q ss_conf 899723415775880037899998751146663223789954113321127976421001111011120001122103--
Q 000893 844 PEGDILIDINDRFPRDFLSDIFTKARISENIAGVSPMHGDGAVLSWNVENHDPRRWSYFRNLAQDEFSRKDVSLMDQD-- 921 (1236)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~d~~~~~~~s~~~~~~~p~~~~~~~~s~~i~~~~~~~wsyyhGl~~~~l~R~D~e~LL~~-- 921 (1236)
..|||+.-++.. | .+||......+|..|+.|.| ++.....++.++ ||||. ++|.|+|.||+.
T Consensus 105 ~~gd~i~v~~~~---~--~~ww~~~~~~~g~~G~~P~~--yv~~~~~l~~~~-----wy~g~----i~r~~ae~~L~~~~ 168 (535)
T 2h8h_A 105 KKGERLQIVNNT---E--GDWWLAHSLSTGQTGYIPSN--YVAPSDSIQAEE-----WYFGK----ITRRESERLLLNAE 168 (535)
T ss_dssp CTTCEEEEEECS---S--SSEEEEEETTTCCEEEEEGG--GEEETTSGGGST-----TBCCS----CCHHHHHHHHTCTT
T ss_pred CCCCEEEEEEEC---C--CCCEEEEECCCCCCEEECCH--HHCCCCCCCCCC-----EECCC----CCHHHHHHHHCCCC
T ss_conf 899889998715---9--98338898889951685551--101210002210-----01056----37899999851577
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --89853223334677102456999999999889----999720000376678774227887767999973313588530
Q 000893 922 --HLGFSSPLTNIEEGATVDYSYPPLKPDGSVMP----QSGSRINFDEGSQRESSSIVGPSTMETHPDYSRSELKGNESL 995 (1236)
Q Consensus 922 --~GdFLVRLSEit~G~TlDlS~n~Lk~~pSviP----~sgS~~Nf~I~S~~essslvgPSs~eThs~~s~s~L~g~eSL 995 (1236)
+|+||||.++...| +|+. +++. ..+.+.||.|.......-.+. . .....++
T Consensus 169 ~~~G~FLvR~S~~~~g---~y~l-------sv~~~~~~~~~~v~h~~I~~~~~g~~~i~-----~--------~~~F~SL 225 (535)
T 2h8h_A 169 NPRGTFLVRESETTKG---AYCL-------SVSDFDNAKGLNVKHYKIRKLDSGGFYIT-----S--------RTQFNSL 225 (535)
T ss_dssp CCTTEEEEEECSSSTT---CEEE-------EEEEEETTTEEEEEEEEEBC-CCSCEEEE-----T--------TEEESSH
T ss_pred CCCCEEEEEECCCCCC---CEEE-------EEEEECCCCCCCEEEEEEEECCCCCEEEE-----C--------CCCCCCH
T ss_conf 7787089995677888---2899-------99961257898439987788689967951-----4--------5045675
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEC-CCEEEEEEEE
Q ss_conf 247775200234334477788889987300012888852100034567039897224773589975435-9228999620
Q 000893 996 QSEVVNHRIQESDYEEGRLDLPTAGIPLVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR-GTDVAIKRIK 1074 (1236)
Q Consensus 996 qsElv~h~I~esd~ee~kLdLPtsg~PL~elal~nfdiseLqiIs~eeYeiLKvLGkGSFGkVYKAklk-Gt~VAIKvLK 1074 (1236)
. +++.++....+.....+..+...... ....+ ....|.+..++|++.+.||+|+||.||++.+. +..||||+++
T Consensus 226 ~-eLv~~y~~~~~~~~~~l~~~~~~~~~---~~~~~-~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~ 300 (535)
T 2h8h_A 226 Q-QLVAYYSKHADGLCHRLTTVCPTSKP---QTQGL-AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 300 (535)
T ss_dssp H-HHHHHHHHCCTTSSSCCCEECCCCCC---CCSSS-STTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEEC
T ss_pred H-HHHEEECCCCCCCCCCCCCCCCCCCC---CCCCC-CCCCEECCHHHHHHHEECCCCCCEEEEEEEECCCCEEEEEEEC
T ss_conf 7-75204012467643334434455433---45666-7564115613525410235699858999998998359999958
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHH-CCCCCHHHHHHH
Q ss_conf 3656798737899999999999998527999410376467649998099999614589899999640-467899999999
Q 000893 1075 KSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK-ERHLDRRKRLII 1153 (1236)
Q Consensus 1075 k~~l~~~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t~deg~L~LVMEYLeGGSL~elL~qk-ek~LSe~eil~I 1153 (1236)
..... ...|.+|+.+|+.++|+||+++++++.. ..+++||||+.+++|.+++... ...+++..++.|
T Consensus 301 ~~~~~---------~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i 368 (535)
T 2h8h_A 301 PGTMS---------PEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 368 (535)
T ss_dssp TTSSC---------HHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHH
T ss_pred CCCCC---------HHHHHHHHHHHHHCCCCCEEEEEEEEEE---CCCEEEEEHHCCCCHHHHHHHCCCCCCCHHHHHHH
T ss_conf 77789---------9999999999976899787159999960---66057642006986999976427887999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCC--CCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 99999999999979940278999967983699988938997436751126864--3367678886441232068999
Q 000893 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL--VTGGVRGTLPWMAPELLNGSSS 1228 (1236)
Q Consensus 1154 A~QILeALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsDFGLArli~ss~--~tssivGTp~YLAPEVL~Gs~~ 1228 (1236)
+.||+.||.|||+++|+||||||+|||++.++ .+||+|||+++...... ......++..|+|||++.+..+
T Consensus 369 ~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~----~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 441 (535)
T 2h8h_A 369 AAQIASGMAYVERMNYVHRDLRAANILVGENL----VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 441 (535)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG----CEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCC
T ss_pred HHHHHHHHHHHHHCCEECCCCCHHHEEECCCC----CEEECCCCCCEECCCCCEECCCCCCCCCCCCCHHHHCCCCC
T ss_conf 99999999999869946888787648983899----58981066644637773011367767644259878645998
No 2
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=1.00 E-value=1 Score=324.49 Aligned_cols=326 Identities=25% Similarity=0.368 Sum_probs=235.4
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC--C
Q ss_conf 99723415775880037899998751146663223789954113321127976421001111011120001122103--8
Q 000893 845 EGDILIDINDRFPRDFLSDIFTKARISENIAGVSPMHGDGAVLSWNVENHDPRRWSYFRNLAQDEFSRKDVSLMDQD--H 922 (1236)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~d~~~~~~~s~~~~~~~p~~~~~~~~s~~i~~~~~~~wsyyhGl~~~~l~R~D~e~LL~~--~ 922 (1236)
.||++.-++..- -.+||... ..+..|+.|.| ++.....++.++ ||||. ++|.++|.||+. +
T Consensus 64 ~gd~~~v~~~~~----~~~w~~~~--~~~~~G~~P~~--yv~~~~~le~~~-----wyhg~----i~r~~ae~ll~~~~~ 126 (495)
T 1opk_A 64 KGEKLRVLGYNH----NGEWCEAQ--TKNGQGWVPSN--YITPVNSLEKHS-----WYHGP----VSRNAAEYLLSSGIN 126 (495)
T ss_dssp TTCEEEEEEECT----TSSEEEEE--CSSCEEEEEGG--GEEESSSGGGST-----TEEEE----CCHHHHHHHGGGCCT
T ss_pred CCCEEEEEECCC----CCCCEEEE--ECCCCCEECCC--CCCCCCCCCCHH-----HHCCC----CCHHHHHHHHHCCCC
T ss_conf 998899941578----87821013--06985132310--102323334313-----33068----898999998527999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 98532233346771024569999999998899997200003766787742278877679999733135885302477752
Q 000893 923 LGFSSPLTNIEEGATVDYSYPPLKPDGSVMPQSGSRINFDEGSQRESSSIVGPSTMETHPDYSRSELKGNESLQSEVVNH 1002 (1236)
Q Consensus 923 GdFLVRLSEit~G~TlDlS~n~Lk~~pSviP~sgS~~Nf~I~S~~essslvgPSs~eThs~~s~s~L~g~eSLqsElv~h 1002 (1236)
|+||||.++..+| +|+. |+.. .+.++||.|.........+... . ...++. +++.+
T Consensus 127 G~fLvR~s~~~~~---~~~l-------sv~~-~~~v~h~~I~~~~~g~~~~~~~-----~--------~F~sl~-eLv~~ 181 (495)
T 1opk_A 127 GSFLVRESESSPG---QRSI-------SLRY-EGRVYHYRINTASDGKLYVSSE-----S--------RFNTLA-ELVHH 181 (495)
T ss_dssp TEEEEEECSSSTT---CEEE-------EEEE-TTEEEEEECEECTTSCEESSTT-----S--------CBSSHH-HHHHH
T ss_pred CEEEEEECCCCCC---CEEE-------EEEE-CCEEEEEEEEECCCCCEEECCC-----C--------CCHHHH-HHHHH
T ss_conf 6499996777789---5479-------9961-8907999987648994685267-----6--------521289-87332
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEC--CCEEEEEEEECCCCCC
Q ss_conf 00234334477788889987300012888852100034567039897224773589975435--9228999620365679
Q 000893 1003 RIQESDYEEGRLDLPTAGIPLVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTG 1080 (1236)
Q Consensus 1003 ~I~esd~ee~kLdLPtsg~PL~elal~nfdiseLqiIs~eeYeiLKvLGkGSFGkVYKAklk--Gt~VAIKvLKk~~l~~ 1080 (1236)
+....+.....+..|.......... ..-.....+.+...+|++.+.||+|+||.||+|++. +..||||+++....
T Consensus 182 ~~~~~~g~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-- 258 (495)
T 1opk_A 182 HSTVADGLITTLHYPAPKRNKPTIY-GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-- 258 (495)
T ss_dssp HTTCCTTSSSCCCEECCCCSCCCCS-SSCSSSSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS--
T ss_pred HCCCCCCCCHHCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHCEEEEEECCCCCEEEEEEEECCCCEEEEEEEECCCCC--
T ss_conf 1013456200035453012344322-4576631342678894651085389976999999857984899999567663--
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHH
Q ss_conf 87378999999999999985279994103764676499980999996145898999996404-67899999999999999
Q 000893 1081 RSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMDAAF 1159 (1236)
Q Consensus 1081 ~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t~deg~L~LVMEYLeGGSL~elL~qke-k~LSe~eil~IA~QILe 1159 (1236)
....|.+|+.+|+.++||||++++++|.... .+++||||+++++|.+++.... ..+++..++.|+.||+.
T Consensus 259 -------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~ 329 (495)
T 1opk_A 259 -------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329 (495)
T ss_dssp -------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHHHHCCCCCEEEEEEEEECCC--CEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf -------0678999999998647999805888994499--2799997368998899998637678999999999997999
Q ss_pred HHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCC--CCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 99999979940278999967983699988938997436751126864--3367678886441232068999
Q 000893 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL--VTGGVRGTLPWMAPELLNGSSS 1228 (1236)
Q Consensus 1160 ALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsDFGLArli~ss~--~tssivGTp~YLAPEVL~Gs~~ 1228 (1236)
||.|||+++|+||||||+|||++.++ .+||+|||+++...... ......+++.|+|||++.+..+
T Consensus 330 ~L~~LH~~~ivHrDlkp~NIll~~~~----~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 396 (495)
T 1opk_A 330 AMEYLEKKNFIHRNLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 396 (495)
T ss_dssp HHHHHHHTTEECSCCSGGGEEECGGG----CEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEE
T ss_pred HHHHHHHCCCCCCCCCHHHEEECCCC----CEEEEECCCCEECCCCCEEECCCCCCCCCEECHHHHHCCCC
T ss_conf 99999868923588786448988899----48995344531316771252178867731458867704998
No 3
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=1.00 E-value=1 Score=321.20 Aligned_cols=324 Identities=26% Similarity=0.374 Sum_probs=237.7
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH----
Q ss_conf 8997234157758800378999987511466632237899541133211279764210011110111200011221----
Q 000893 844 PEGDILIDINDRFPRDFLSDIFTKARISENIAGVSPMHGDGAVLSWNVENHDPRRWSYFRNLAQDEFSRKDVSLMD---- 919 (1236)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~d~~~~~~~s~~~~~~~p~~~~~~~~s~~i~~~~~~~wsyyhGl~~~~l~R~D~e~LL---- 919 (1236)
-.||++.-+.+ + .+||....+.+|..|+.|.| ++.....++.++ ||||. ++|.++|.||
T Consensus 28 ~~gd~~~v~~~----~--~~W~~~~~~~~g~~G~~P~~--yv~~~~~le~~~-----W~~g~----i~r~~ae~~L~~~~ 90 (454)
T 1qcf_A 28 QKGDQMVVLEE----S--GEWWKARSLATRKEGYIPSN--YVARVDSLETEE-----WFFKG----ISRKDAERQLLAPG 90 (454)
T ss_dssp CTTCEEEEEEC----C--TTEEEEEETTTCCEEEEEGG--GEEETTCGGGST-----TEETT----CCHHHHHHHHHSTT
T ss_pred CCCCEEEEEEC----C--CCCEEEEECCCCCEEEECCH--HCCCCCCCCCCC-----CCCCC----CCHHHHHHHHHCCC
T ss_conf 69999999834----8--99808897789912785323--203443345420-----00366----53666666640678
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0389853223334677102456999999999889----999720000376678774227887767999973313588530
Q 000893 920 QDHLGFSSPLTNIEEGATVDYSYPPLKPDGSVMP----QSGSRINFDEGSQRESSSIVGPSTMETHPDYSRSELKGNESL 995 (1236)
Q Consensus 920 ~~~GdFLVRLSEit~G~TlDlS~n~Lk~~pSviP----~sgS~~Nf~I~S~~essslvgPSs~eThs~~s~s~L~g~eSL 995 (1236)
..+|+||||.++...| +|+. |++. .++.+.||.+....+....+.+. ....++
T Consensus 91 ~~~G~FLvR~s~~~~g---~y~l-------sv~~~~~~~~~~v~H~~I~~~~~g~~~i~~~-------------~~F~sl 147 (454)
T 1qcf_A 91 NMLGSFMIRDSETTKG---SYSL-------SVRDYDPRQGDTVKHYKIRTLDNGGFYISPR-------------STFSTL 147 (454)
T ss_dssp CCTTCEEEEECSSSTT---SEEE-------EEEEEETTTEEEEEEEEEEECTTSCEESSSS-------------SCBSSH
T ss_pred CCCCEEEEEECCCCCC---EEEE-------EEEECCCCCCCCEEEEEEEECCCCCEEEECC-------------CCCCCH
T ss_conf 8775499997767787---1799-------9975036789855999999837995898276-------------001779
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEC-CCEEEEEEEE
Q ss_conf 247775200234334477788889987300012888852100034567039897224773589975435-9228999620
Q 000893 996 QSEVVNHRIQESDYEEGRLDLPTAGIPLVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR-GTDVAIKRIK 1074 (1236)
Q Consensus 996 qsElv~h~I~esd~ee~kLdLPtsg~PL~elal~nfdiseLqiIs~eeYeiLKvLGkGSFGkVYKAklk-Gt~VAIKvLK 1074 (1236)
. +++.++....+.....+..|...... ........+.+..++|++.+.||+|+||+||+|.++ +..||||+++
T Consensus 148 ~-eLv~~y~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~ 221 (454)
T 1qcf_A 148 Q-ELVDHYKKGNDGLCQKLSVPCMSSKP-----QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK 221 (454)
T ss_dssp H-HHHHHHTSSCTTSSSCCCSBCCCCCC-----CCCCCTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEEC
T ss_pred H-HHHHHHHHCCCCCCCCCCCCCCCCCC-----CCCCCCCCEEECHHHEEEEEECCCCCCEEEEEEEECCCCEEEEEEEC
T ss_conf 9-99999974267743235656346676-----55435655351468938877715677559999998894389999942
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHC-CCCCHHHHHHH
Q ss_conf 36567987378999999999999985279994103764676499980999996145898999996404-67899999999
Q 000893 1075 KSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLII 1153 (1236)
Q Consensus 1075 k~~l~~~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t~deg~L~LVMEYLeGGSL~elL~qke-k~LSe~eil~I 1153 (1236)
.... ....|.+|+.+|+.++||||+++++++.. ..+++||||+.+++|.+++.... ..+++..++.+
T Consensus 222 ~~~~---------~~~~~~~E~~~l~~l~h~~iv~l~~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~ 289 (454)
T 1qcf_A 222 PGSM---------SVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 289 (454)
T ss_dssp TTSB---------CHHHHHHHHHHHTTCCCTTBCCEEEEECS---SSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHH
T ss_pred CCCC---------CHHHHHHHHHHHHHCCCCCEEEEEEEEEC---CCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHH
T ss_conf 7876---------68999999999863789888559899948---96378986359994999998556888999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCC--CCCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 99999999999979940278999967983699988938997436751126864--33676788864412320689999
Q 000893 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL--VTGGVRGTLPWMAPELLNGSSSK 1229 (1236)
Q Consensus 1154 A~QILeALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsDFGLArli~ss~--~tssivGTp~YLAPEVL~Gs~~~ 1229 (1236)
+.||+.||.|||+++|+||||||+|||++.++ .+||+|||+++...... ......+++.|+|||++.+..+.
T Consensus 290 ~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~----~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 363 (454)
T 1qcf_A 290 SAQIAEGMAFIEQRNYIHRDLRAANILVSASL----VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363 (454)
T ss_dssp HHHHHHHHHHHHHTTCCCSSCSGGGEEECTTC----CEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC----CEEEEECCCCEECCCCCEECCCCCCCCCCCCCHHHHCCCCCC
T ss_conf 99999999999769924788778878987999----689823777558677722403798556562399786569989
No 4
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=1.00 E-value=1 Score=317.88 Aligned_cols=325 Identities=26% Similarity=0.367 Sum_probs=237.8
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC--
Q ss_conf 899723415775880037899998751146663223789954113321127976421001111011120001122103--
Q 000893 844 PEGDILIDINDRFPRDFLSDIFTKARISENIAGVSPMHGDGAVLSWNVENHDPRRWSYFRNLAQDEFSRKDVSLMDQD-- 921 (1236)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~d~~~~~~~s~~~~~~~p~~~~~~~~s~~i~~~~~~~wsyyhGl~~~~l~R~D~e~LL~~-- 921 (1236)
-.||++.-+..- -.+||....+..+..|+.|.| ++.....++.++ ||||. ++|.++|.||++
T Consensus 22 ~~gd~~~v~~~~-----~~~ww~~~~~~~g~~G~~P~~--yv~~~~~le~~~-----w~~g~----~~r~~ae~~L~~~~ 85 (452)
T 1fmk_A 22 KKGERLQIVNNT-----EGDWWLAHSLSTGQTGYIPSN--YVAPSDSIQAEE-----WYFGK----ITRRESERLLLNAE 85 (452)
T ss_dssp CTTCEEEESCCC-----SSSEEEEEETTTCCEEEEEGG--GEEETTSGGGST-----TEEET----CCHHHHHHHHTCTT
T ss_pred CCCCEEEEECCC-----CCCCEEEEECCCCCCCCCCCC--CCCCCCCCCCCC-----CCCCC----CCHHHHHHHHCCCC
T ss_conf 699899995357-----998337897678965556850--024433224331-----00477----45778988741578
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --89853223334677102456999999999889----999720000376678774227887767999973313588530
Q 000893 922 --HLGFSSPLTNIEEGATVDYSYPPLKPDGSVMP----QSGSRINFDEGSQRESSSIVGPSTMETHPDYSRSELKGNESL 995 (1236)
Q Consensus 922 --~GdFLVRLSEit~G~TlDlS~n~Lk~~pSviP----~sgS~~Nf~I~S~~essslvgPSs~eThs~~s~s~L~g~eSL 995 (1236)
+|+||||.++..+| +|+. |++. ..+.+.||.|....+..-.+. .. ....++
T Consensus 86 ~~~G~FLvR~s~~~~g---~y~l-------sv~~~~~~~~~~v~h~~I~~~~~g~~~~~-----~~--------~~F~Sl 142 (452)
T 1fmk_A 86 NPRGTFLVRESETTKG---AYCL-------SVSDFDNAKGLNVKHYKIRKLDSGGFYIT-----SR--------TQFNSL 142 (452)
T ss_dssp SCTTEEEEEECSSSTT---CEEE-------EEEEEETTTEEEEEEEEEEECTTSCEESS-----TT--------SEESSH
T ss_pred CCCCEEEEEECCCCCC---CEEE-------EEEEECCCCCCCEEEEEEEECCCCCEEEE-----CC--------CCCCCH
T ss_conf 8786499996788888---2599-------99861157898379999998479978995-----57--------346999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECC-CEEEEEEEE
Q ss_conf 2477752002343344777888899873000128888521000345670398972247735899754359-228999620
Q 000893 996 QSEVVNHRIQESDYEEGRLDLPTAGIPLVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIK 1074 (1236)
Q Consensus 996 qsElv~h~I~esd~ee~kLdLPtsg~PL~elal~nfdiseLqiIs~eeYeiLKvLGkGSFGkVYKAklkG-t~VAIKvLK 1074 (1236)
. +++.++....+.....+..+...... ....+ ....+.+..++|++.+.||+|+||.||+|.+.+ ..||||+++
T Consensus 143 ~-~Li~~y~~~~~~l~~~l~~~~~~~~~---~~~~~-~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~ 217 (452)
T 1fmk_A 143 Q-QLVAYYSKHADGLCHRLTTVCPTSKP---QTQGL-AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 217 (452)
T ss_dssp H-HHHHHHTTCCTTSSSCCCEECCCCCC---CCSSS-STTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECC
T ss_pred H-HHHHHHHHCCCCCHHHCCCCCCCCCC---CCCCC-CCCCCCCCHHHCEEEEEECCCCCEEEEEEEECCCCEEEEEEEC
T ss_conf 9-99987660356612202554334444---46777-7201205766725555644788808999997898408999926
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHH-CCCCCHHHHHHH
Q ss_conf 3656798737899999999999998527999410376467649998099999614589899999640-467899999999
Q 000893 1075 KSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK-ERHLDRRKRLII 1153 (1236)
Q Consensus 1075 k~~l~~~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t~deg~L~LVMEYLeGGSL~elL~qk-ek~LSe~eil~I 1153 (1236)
..... ...|.+|+.+|+.++||||+++++++.. ..+++||||+++++|.+++... ...+++..++.+
T Consensus 218 ~~~~~---------~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i 285 (452)
T 1fmk_A 218 PGTMS---------PEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285 (452)
T ss_dssp TTSSC---------HHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHH
T ss_pred CCCCC---------HHHHHHHHHHHHHCCCCCEEEEEEEECC---CCEEEEEHHHCCCCHHHHHHHCCCCCCCHHHHHHH
T ss_conf 67789---------9999999999986899897249899817---96289742414887999997447898999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCC--CCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 99999999999979940278999967983699988938997436751126864--3367678886441232068999
Q 000893 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL--VTGGVRGTLPWMAPELLNGSSS 1228 (1236)
Q Consensus 1154 A~QILeALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsDFGLArli~ss~--~tssivGTp~YLAPEVL~Gs~~ 1228 (1236)
+.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++...... ......+++.|+|||++.+..+
T Consensus 286 ~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~----~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 358 (452)
T 1fmk_A 286 AAQIASGMAYVERMNYVHRDLRAANILVGENL----VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358 (452)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG----CEEECCCCTTC--------------CCGGGSCHHHHHHCCC
T ss_pred HHHHHHHHHHHHHCCEECCCCCHHHEEECCCC----CEEECCCCCCEECCCCCEECCCCCCCCCCCCCHHHHHCCCC
T ss_conf 99999999999849845888776448987999----78978775662437883120368756655169858706997
No 5
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=1.00 E-value=1 Score=316.08 Aligned_cols=324 Identities=27% Similarity=0.364 Sum_probs=231.1
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99723415775880037899998751146663223789954113------321127976421001111011120001122
Q 000893 845 EGDILIDINDRFPRDFLSDIFTKARISENIAGVSPMHGDGAVLS------WNVENHDPRRWSYFRNLAQDEFSRKDVSLM 918 (1236)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~d~~~~~~~s~~~~~~~p~~~~~~~~s------~~i~~~~~~~wsyyhGl~~~~l~R~D~e~L 918 (1236)
.||++.-+.. . --.+||.... .+|..|+.|.| ++..- .+++.++ ||||. ++|.+||.|
T Consensus 32 ~gd~i~v~~~-~---~~~~ww~~~~-~~g~~G~~P~~--yv~~~~~~~~~~~~~~~~-----wyhg~----i~r~~ae~~ 95 (450)
T 1k9a_A 32 KGDVLTIVAV-T---KDPNWYKAKN-KVGREGIIPAN--YVQKREGVKAGTKLSLMP-----WFHGK----ITREQAERL 95 (450)
T ss_dssp TTCEEEEEEE-C---SSTTEEEEEC-TTCCEEEEEGG--GEEECCCCCCCTTEESCT-----TBCTT----CCHHHHHHH
T ss_pred CCCEEEEEEC-C---CCCCCEEEEE-CCCCEEEECHH--CCCCCCCCCCCCCCCCCC-----CCCCC----CCHHHHHHH
T ss_conf 9999999515-6---7898458897-89952662211--045544545565312344-----40257----577786653
Q ss_pred HC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 10--3898532233346771024569999999998899997200003766787742278877679999733135885302
Q 000893 919 DQ--DHLGFSSPLTNIEEGATVDYSYPPLKPDGSVMPQSGSRINFDEGSQRESSSIVGPSTMETHPDYSRSELKGNESLQ 996 (1236)
Q Consensus 919 L~--~~GdFLVRLSEit~G~TlDlS~n~Lk~~pSviP~sgS~~Nf~I~S~~essslvgPSs~eThs~~s~s~L~g~eSLq 996 (1236)
|+ .+|+||||.++...| +++. ++. ..+.+.||.+..... ...+ .... ...++.
T Consensus 96 L~~~~~G~FlvR~S~~~~g---~~~L-------sv~-~~~~v~H~~I~~~~~-~~~i----~~~~---------~F~sl~ 150 (450)
T 1k9a_A 96 LYPPETGLFLVRESTNYPG---DYTL-------CVS-CEGKVEHYRIMYHAS-KLSI----DEEV---------YFENLM 150 (450)
T ss_dssp TCSCCTTEEEEEECSSSTT---SEEE-------EEE-CSSSEEEEEEEEETT-EEES----SSSS---------CBSSHH
T ss_pred HCCCCCCEEEEEECCCCCC---CEEE-------EEE-ECCEEEEEEEEECCC-CEEE----CCCC---------CCCCHH
T ss_conf 0157885399983677788---5589-------997-388433799970588-4674----5322---------036599
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEEEECC
Q ss_conf 47775200234334477788889987300012888852100034567039897224773589975435922899962036
Q 000893 997 SEVVNHRIQESDYEEGRLDLPTAGIPLVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKS 1076 (1236)
Q Consensus 997 sElv~h~I~esd~ee~kLdLPtsg~PL~elal~nfdiseLqiIs~eeYeiLKvLGkGSFGkVYKAklkGt~VAIKvLKk~ 1076 (1236)
+++.++....+....++..|........ ....+ ....+.+..++|++++.||+|+||.||++.++++.||||+++..
T Consensus 151 -eLv~~y~~~~~~~~~~l~~~~~~~~~~~-~~~~~-~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~ 227 (450)
T 1k9a_A 151 -QLVEHYTTDADGLCTRLIKPKVMEGTVA-AQDEF-YRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND 227 (450)
T ss_dssp -HHHHHHHHCCTTSSSCCCEECCCTTCEE-HHHHH-HHTTCBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSC
T ss_pred -HHHHHHCCCCCCHHHHCCCCCCCCCCCC-CHHHH-CCCCCCCCHHHEEEEEEECCCCCEEEEEEEECCCEEEEEEECCC
T ss_conf -9974220256530000035521247665-50221-33554027678388765337688559999963986999996780
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHCC-CCCHHHHHHHHH
Q ss_conf 5679873789999999999999852799941037646764999809999961458989999964046-789999999999
Q 000893 1077 CFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER-HLDRRKRLIIAM 1155 (1236)
Q Consensus 1077 ~l~~~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t~deg~L~LVMEYLeGGSL~elL~qkek-~LSe~eil~IA~ 1155 (1236)
. ....|.+|+.+++.++||||+++++++.... ..+++||||+++++|.+++..... .+++..++.++.
T Consensus 228 ~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 296 (450)
T 1k9a_A 228 A----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 296 (450)
T ss_dssp T----------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT-SCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHH
T ss_pred H----------HHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 5----------8999999999997566998788999997379-9459999834899589999865988799999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 99999999997994027899996798369998893899743675112686433676788864412320689999
Q 000893 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSK 1229 (1236)
Q Consensus 1156 QILeALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsDFGLArli~ss~~tssivGTp~YLAPEVL~Gs~~~ 1229 (1236)
|++.||.|||+++|+||||||+|||++.++ .+||+|||+++...... ....+++.|+|||++.+..+.
T Consensus 297 qi~~~l~~LH~~~ivHrDlkp~Nill~~~~----~~kl~DfG~a~~~~~~~--~~~~~~~~y~aPE~~~~~~~~ 364 (450)
T 1k9a_A 297 DVCEAMEYLEGNNFVHRDLAARNVLVSEDN----VAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFS 364 (450)
T ss_dssp HHHHHHHHHHHTTEECSCCCGGGEEECTTS----CEEECCCTTCEECC--------CCCTTTSCHHHHHSSCCC
T ss_pred HHHHHHHHHHHCCEECCCCCHHHEEECCCC----CEEEEECCCCCCCCCCC--CCCCCCCCEECHHHHCCCCCC
T ss_conf 999999999869945788787638987899----78994478765565445--678777541088786579988
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=306.15 Aligned_cols=181 Identities=22% Similarity=0.399 Sum_probs=155.5
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEE--CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
Q ss_conf 3456703989722477358997543--59228999620365679873789999999999999852799941037646764
Q 000893 1039 IKNEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQD 1116 (1236)
Q Consensus 1039 Is~eeYeiLKvLGkGSFGkVYKAkl--kGt~VAIKvLKk~~l~~~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t 1116 (1236)
-..++|++++.||+|+||+||+|++ +++.||||++.+... .......+.+|+.+|+.|+|||||+++++|.+
T Consensus 21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~ 94 (350)
T 4b9d_A 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM------SSKEREESRREVAVLANMKHPNIVQYRESFEE 94 (350)
T ss_dssp SCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC------CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf 851255884797027793999999889998999999865878------97999999999999987799898919999998
Q ss_pred CCCCEEEEEEEECCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEE
Q ss_conf 99980999996145898999996404-67899999999999999999999799402789999679836999889389974
Q 000893 1117 GPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGD 1195 (1236)
Q Consensus 1117 ~deg~L~LVMEYLeGGSL~elL~qke-k~LSe~eil~IA~QILeALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsD 1195 (1236)
.. .+|||||||+||+|.+++.... ..+++..++.|+.||+.||.|||+++||||||||+||||+.++ .+||+|
T Consensus 95 ~~--~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g----~vKl~D 168 (350)
T 4b9d_A 95 NG--SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG----TVQLGD 168 (350)
T ss_dssp TT--EEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC----CEEECS
T ss_pred CC--EEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCC----CEEECC
T ss_conf 99--999999488998399999973899997899999999999999999989915135978997987899----989764
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCHHHHCCCCCCCC
Q ss_conf 3675112686-43367678886441232068999999
Q 000893 1196 FGLSKIKRNT-LVTGGVRGTLPWMAPELLNGSSSKVS 1231 (1236)
Q Consensus 1196 FGLArli~ss-~~tssivGTp~YLAPEVL~Gs~~~~S 1231 (1236)
||+|+..... ......+||+.|||||++.+..+...
T Consensus 169 FGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~ 205 (350)
T 4b9d_A 169 FGIARVLNSTVELARACIGTPYYLSPEICENKPYNNK 205 (350)
T ss_dssp TTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHH
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCH
T ss_conf 6521440688541014578836039999879998959
No 7
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=1.00 E-value=1 Score=303.29 Aligned_cols=281 Identities=27% Similarity=0.388 Sum_probs=207.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 13321127976421001111011120001122103898532233346771024569999999998899997200003766
Q 000893 887 LSWNVENHDPRRWSYFRNLAQDEFSRKDVSLMDQDHLGFSSPLTNIEEGATVDYSYPPLKPDGSVMPQSGSRINFDEGSQ 966 (1236)
Q Consensus 887 ~s~~i~~~~~~~wsyyhGl~~~~l~R~D~e~LL~~~GdFLVRLSEit~G~TlDlS~n~Lk~~pSviP~sgS~~Nf~I~S~ 966 (1236)
+...++.++ ||||. ++|.+||.||+.+|+||||.++... +|+. |+... +.+.||.|...
T Consensus 6 ~~~~l~~~~-----wyhg~----i~r~~a~~lL~~~G~flvR~s~~~~----~~~l-------sv~~~-~~~~h~~i~~~ 64 (377)
T 3cbl_A 6 VQKPLHEQL-----WYHGA----IPRAEVAELLVHSGDFLVRESQGKQ----EYVL-------SVLWD-GLPRHFIIQSL 64 (377)
T ss_dssp GGSCGGGCT-----TBCTT----CCHHHHHHHCCSTTEEEEEECC--C----CEEE-------EC------CCEEEC---
T ss_pred CCCCCCCCC-----CCCCC----CCHHHHHHHHHCCCCEEEEEECCCC----CEEE-------EEEEC-CCCCCHHHCCC
T ss_conf 455521288-----64778----7789999997448978999807999----6799-------99978-97541233124
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 78774227887767999973313588530247775200234334477788889987300012888852100034567039
Q 000893 967 RESSSIVGPSTMETHPDYSRSELKGNESLQSEVVNHRIQESDYEEGRLDLPTAGIPLVDLALGNFDISTLQIIKNEDLEE 1046 (1236)
Q Consensus 967 ~essslvgPSs~eThs~~s~s~L~g~eSLqsElv~h~I~esd~ee~kLdLPtsg~PL~elal~nfdiseLqiIs~eeYei 1046 (1236)
.+ .- .... ....++. +++.|+............ .. .........+.+..++|++
T Consensus 65 ~~-~~-----~~~~---------~~F~sl~-~LI~~y~~~~~~l~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~ 118 (377)
T 3cbl_A 65 DN-LY-----RLEG---------EGFPSIP-LLIDHLLSTQQPLTKKSG-----VV-----LHRAVPKDKWVLNHEDLVL 118 (377)
T ss_dssp -C-CC-----CC-------------CCSHH-HHHHHHHHHTCCC----------CC-----CCEECCCCTTBCCGGGEEE
T ss_pred CC-EE-----EECC---------EECCCHH-HHHHHHHHCCCCCCCCCC-----CC-----CCCCCCCCCCEECHHHEEE
T ss_conf 62-69-----9602---------3205658-889988611477655567-----42-----2367656561774699698
Q ss_pred EEEECCCCCEEEEEEEEC--CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEE
Q ss_conf 897224773589975435--922899962036567987378999999999999985279994103764676499980999
Q 000893 1047 LKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLAT 1124 (1236)
Q Consensus 1047 LKvLGkGSFGkVYKAklk--Gt~VAIKvLKk~~l~~~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t~deg~L~L 1124 (1236)
.+.||+|+||.||+|++. ++.||||+++... .......|.+|+.+++.++||||++++++|.... .+++
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 189 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-------PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYI 189 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-------CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEE
T ss_pred EEEECCCCCCEEEEEEEECCCEEEEEEECCCCC-------CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC--CCEE
T ss_conf 667656799828999994188689999713348-------9899999999999998577998888999992699--7389
Q ss_pred EEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 99614589899999640467899999999999999999999799402789999679836999889389974367511268
Q 000893 1125 VTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN 1204 (1236)
Q Consensus 1125 VMEYLeGGSL~elL~qkek~LSe~eil~IA~QILeALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsDFGLArli~s 1204 (1236)
||||+++++|.+++......+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++....
T Consensus 190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~----~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN----VLKISDFGMSREEAD 265 (377)
T ss_dssp EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC----CEEECCGGGCEECTT
T ss_pred EEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC----CEEECCCCCCEECCC
T ss_conf 9975799989999985689899999999999999999999878867755678888975899----389775788613578
Q ss_pred CCCC---CCCCCCCCCCCHHHHCCCC
Q ss_conf 6433---6767888644123206899
Q 000893 1205 TLVT---GGVRGTLPWMAPELLNGSS 1227 (1236)
Q Consensus 1205 s~~t---ssivGTp~YLAPEVL~Gs~ 1227 (1236)
.... ....+++.|+|||++.+..
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~ 291 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGR 291 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCE
T ss_pred CCEEECCCCCCCCCCCCCHHHHCCCC
T ss_conf 81551378777886758986755599
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=302.69 Aligned_cols=176 Identities=24% Similarity=0.394 Sum_probs=151.9
Q ss_pred CCEEEEEEECCCCCEEEEEEEE--CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC
Q ss_conf 6703989722477358997543--59228999620365679873789999999999999852799941037646764999
Q 000893 1042 EDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPG 1119 (1236)
Q Consensus 1042 eeYeiLKvLGkGSFGkVYKAkl--kGt~VAIKvLKk~~l~~~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t~de 1119 (1236)
+.|+++++||+|+||+||+|++ +++.||||++.+..... ...+.+|+.+|+.++|||||+++++|.+..
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~- 221 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLVGD- 221 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS--------GGGHHHHHHHHHHCCCTTBCCEEEEEEETT-
T ss_pred HHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHH--------HHHHHHHHHHHHHCCCCCCCCEEEEEEECC-
T ss_conf 84386169624818489999999999899999986255468--------999999999998579989871689999899-
Q ss_pred CEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCC
Q ss_conf 80999996145898999996404678999999999999999999997994027899996798369998893899743675
Q 000893 1120 GTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS 1199 (1236)
Q Consensus 1120 g~L~LVMEYLeGGSL~elL~qkek~LSe~eil~IA~QILeALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsDFGLA 1199 (1236)
.+|||||||+||+|.+++.. ..+++..++.|+.||+.||.|||+++||||||||+||||+.++ .+||+|||+|
T Consensus 222 -~~~iVmEy~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g----~vKl~DFGla 294 (423)
T 4fie_A 222 -ELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG----RVKLSDFGFC 294 (423)
T ss_dssp -EEEEEEECCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC----CEEECCCTTC
T ss_pred -EEEEEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC----CEEEECCCCC
T ss_conf -99999969899828988761--6989999999999999999999988904465787778985899----9898037265
Q ss_pred CCCCC-CCCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 11268-64336767888644123206899999961
Q 000893 1200 KIKRN-TLVTGGVRGTLPWMAPELLNGSSSKVSEK 1233 (1236)
Q Consensus 1200 rli~s-s~~tssivGTp~YLAPEVL~Gs~~~~SdD 1233 (1236)
+.+.. ......++||+.|||||++.+..+....|
T Consensus 295 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~D 329 (423)
T 4fie_A 295 AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD 329 (423)
T ss_dssp EECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHH
T ss_pred EECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHH
T ss_conf 47778876434666474727999977999996899
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=302.52 Aligned_cols=182 Identities=30% Similarity=0.398 Sum_probs=155.0
Q ss_pred CCCCEEEEEEECCCCCEEEEEEEE--CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC
Q ss_conf 456703989722477358997543--592289996203656798737899999999999998527999410376467649
Q 000893 1040 KNEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDG 1117 (1236)
Q Consensus 1040 s~eeYeiLKvLGkGSFGkVYKAkl--kGt~VAIKvLKk~~l~~~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t~ 1117 (1236)
..++|++++.||+|+||+||+|++ +++.||||++.+..+. .......+.+|+.+|+.++|||||+++++|.+.
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~-----~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 104 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-----KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD 104 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-----CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
T ss_conf 852368988983164849999999999989999998888877-----978999999999999867998989199999738
Q ss_pred CCCEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEECC
Q ss_conf 99809999961458989999964046789999999999999999999979940278999967983699988938997436
Q 000893 1118 PGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFG 1197 (1236)
Q Consensus 1118 deg~L~LVMEYLeGGSL~elL~qkek~LSe~eil~IA~QILeALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsDFG 1197 (1236)
. .+|+|||||+||+|.+++... ..+++..++.|+.||+.||.|||+++|+||||||+||||+.++ .+||+|||
T Consensus 105 ~--~~yivmEy~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g----~vKl~DFG 177 (311)
T 4aw0_A 105 E--KLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM----HIQITDFG 177 (311)
T ss_dssp S--EEEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS----CEEECCCT
T ss_pred C--EEEEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC----CEEEEECC
T ss_conf 9--899999648998999999874-9999999999999999999999988782687878996985898----88998768
Q ss_pred CCCCCCC---CCCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 7511268---64336767888644123206899999961
Q 000893 1198 LSKIKRN---TLVTGGVRGTLPWMAPELLNGSSSKVSEK 1233 (1236)
Q Consensus 1198 LArli~s---s~~tssivGTp~YLAPEVL~Gs~~~~SdD 1233 (1236)
+|+.... ......+|||+.|||||++.+..+....|
T Consensus 178 la~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~D 216 (311)
T 4aw0_A 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD 216 (311)
T ss_dssp TCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHH
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHH
T ss_conf 750257787765436755680307998976899996898
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=301.16 Aligned_cols=176 Identities=24% Similarity=0.394 Sum_probs=151.9
Q ss_pred CCEEEEEEECCCCCEEEEEEEE--CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC
Q ss_conf 6703989722477358997543--59228999620365679873789999999999999852799941037646764999
Q 000893 1042 EDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPG 1119 (1236)
Q Consensus 1042 eeYeiLKvLGkGSFGkVYKAkl--kGt~VAIKvLKk~~l~~~see~er~~keFlrEIeILkkLrHPNIVrLlGsf~t~de 1119 (1236)
+.|+++++||+|+||+||+|++ +++.||||++.+..... ...+.+|+.+|+.++|||||+++++|.+..
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~- 144 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLVGD- 144 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS--------GGGGHHHHHHHHHCCCTTBCCEEEEEEETT-
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHH--------HHHHHHHHHHHHHCCCCCCCCEEEEEEECC-
T ss_conf 75387079602728299999998999899999985276568--------999999999998679989991999999899-
Q ss_pred CEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCC
Q ss_conf 80999996145898999996404678999999999999999999997994027899996798369998893899743675
Q 000893 1120 GTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS 1199 (1236)
Q Consensus 1120 g~L~LVMEYLeGGSL~elL~qkek~LSe~eil~IA~QILeALeYLHSkGIIHRDIKPsNILIDsdG~I~lvVKLsDFGLA 1199 (1236)
.+|||||||++|+|.+++.. ..+++..++.|+.||+.||.|||+++||||||||+||||+.++ .+||+|||+|
T Consensus 145 -~~~ivmEy~~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g----~vKl~DFGla 217 (346)
T 4fih_A 145 -ELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG----RVKLSDFGFC 217 (346)
T ss_dssp -EEEEEECCCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC----CEEECCCTTC
T ss_pred -EEEEEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC----CEEEECCCCC
T ss_conf -99999969899808999871--8989999999999999999999988835562788997887999----8899027575
Q ss_pred CCCCC-CCCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 11268-64336767888644123206899999961
Q 000893 1200 KIKRN-TLVTGGVRGTLPWMAPELLNGSSSKVSEK 1233 (1236)
Q Consensus 1200 rli~s-s~~tssivGTp~YLAPEVL~Gs~~~~SdD 1233 (1236)
+.... ......++||+.|||||++.+..+....|
T Consensus 218 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~D 252 (346)
T 4fih_A 218 AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD 252 (346)
T ss_dssp EECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred EECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHH
T ss_conf 36678877534656275827999977999996899
Done!