Query 000909
Match_columns 1230
No_of_seqs 803 out of 4413
Neff 8.5
Searched_HMMs 46136
Date Tue Apr 2 00:45:19 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000909.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000909hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 7E-217 2E-221 1966.4 130.1 1206 7-1230 12-1226(1228)
2 PTZ00265 multidrug resistance 100.0 2E-174 4E-179 1720.1 153.7 1203 6-1230 43-1466(1466)
3 KOG0054 Multidrug resistance-a 100.0 4E-169 8E-174 1585.5 125.7 1093 98-1227 263-1373(1381)
4 PLN03130 ABC transporter C fam 100.0 5E-159 1E-163 1587.6 147.7 1090 98-1229 366-1474(1622)
5 PLN03232 ABC transporter C fam 100.0 7E-158 1E-162 1579.8 143.8 1150 27-1229 305-1471(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 2E-153 5E-158 1538.0 146.4 1158 29-1229 323-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 9E-147 2E-151 1468.3 146.9 1161 26-1229 247-1546(1560)
8 TIGR01271 CFTR_protein cystic 100.0 9E-145 2E-149 1449.7 147.1 1137 40-1229 97-1452(1490)
9 KOG0058 Peptide exporter, ABC 100.0 2E-111 4E-116 982.9 66.3 569 649-1229 134-704 (716)
10 KOG0058 Peptide exporter, ABC 100.0 2E-106 3E-111 942.0 67.6 574 9-597 134-708 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 1E-100 2E-105 941.5 71.2 578 6-594 648-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 4E-94 8.6E-99 878.7 72.5 560 658-1230 150-709 (709)
13 COG2274 SunT ABC-type bacterio 100.0 2.3E-91 5.1E-96 854.4 72.1 567 9-593 141-708 (709)
14 COG1132 MdlB ABC-type multidru 100.0 3.8E-88 8.3E-93 838.6 74.8 553 660-1230 13-565 (567)
15 PRK11174 cysteine/glutathione 100.0 8.4E-87 1.8E-91 831.7 74.8 567 650-1230 10-585 (588)
16 PRK11174 cysteine/glutathione 100.0 1.2E-86 2.6E-91 830.3 75.0 576 1-595 1-586 (588)
17 TIGR00958 3a01208 Conjugate Tr 100.0 2.7E-86 5.9E-91 837.5 75.2 564 649-1226 148-711 (711)
18 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-84 2.4E-89 824.6 75.9 562 650-1229 123-685 (686)
19 COG1132 MdlB ABC-type multidru 100.0 1.4E-84 3.1E-89 806.7 75.3 561 10-594 4-565 (567)
20 PTZ00265 multidrug resistance 100.0 5.6E-85 1.2E-89 866.2 76.3 571 9-593 812-1465(1466)
21 TIGR01193 bacteriocin_ABC ABC- 100.0 3E-84 6.6E-89 823.4 74.7 563 650-1227 144-707 (708)
22 TIGR00958 3a01208 Conjugate Tr 100.0 6.2E-84 1.3E-88 816.0 74.1 563 8-589 147-710 (711)
23 PRK11160 cysteine/glutathione 100.0 1.4E-83 3E-88 795.7 75.0 566 651-1228 5-573 (574)
24 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 7.4E-84 1.6E-88 821.0 74.1 568 650-1227 142-710 (710)
25 KOG0056 Heavy metal exporter H 100.0 9E-87 1.9E-91 727.5 37.9 502 717-1229 271-774 (790)
26 COG4988 CydD ABC-type transpor 100.0 7E-83 1.5E-87 732.0 69.4 550 668-1230 6-556 (559)
27 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 8.8E-83 1.9E-87 807.2 76.5 563 8-593 121-685 (686)
28 PRK11176 lipid transporter ATP 100.0 1.9E-82 4E-87 792.4 75.4 565 651-1229 14-579 (582)
29 TIGR03375 type_I_sec_LssB type 100.0 1.8E-82 4E-87 805.4 74.5 552 653-1218 138-689 (694)
30 PRK10790 putative multidrug tr 100.0 3.9E-82 8.4E-87 789.7 75.4 564 650-1229 11-575 (592)
31 TIGR01193 bacteriocin_ABC ABC- 100.0 3.7E-82 8E-87 804.3 74.7 564 8-591 142-707 (708)
32 KOG0057 Mitochondrial Fe/S clu 100.0 7.7E-83 1.7E-87 717.0 59.5 541 676-1229 44-586 (591)
33 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.9E-82 1.1E-86 804.3 74.3 564 8-590 140-709 (710)
34 PRK11160 cysteine/glutathione 100.0 1E-81 2.2E-86 779.0 74.5 566 10-591 4-572 (574)
35 TIGR01846 type_I_sec_HlyB type 100.0 1.6E-81 3.4E-86 796.0 75.6 564 652-1229 129-692 (694)
36 COG4987 CydC ABC-type transpor 100.0 1.5E-81 3.2E-86 706.6 64.7 505 713-1228 66-572 (573)
37 TIGR03375 type_I_sec_LssB type 100.0 2.6E-81 5.6E-86 794.9 74.0 556 8-581 133-689 (694)
38 COG4988 CydD ABC-type transpor 100.0 7.9E-81 1.7E-85 715.0 70.5 549 30-595 7-557 (559)
39 KOG0056 Heavy metal exporter H 100.0 2.6E-84 5.7E-89 708.2 38.2 556 27-597 219-778 (790)
40 PRK11176 lipid transporter ATP 100.0 1.1E-80 2.3E-85 776.5 76.2 566 10-594 13-580 (582)
41 TIGR02203 MsbA_lipidA lipid A 100.0 1.2E-80 2.6E-85 775.4 74.8 563 653-1229 5-568 (571)
42 KOG0057 Mitochondrial Fe/S clu 100.0 1.3E-80 2.8E-85 699.0 61.2 576 3-594 6-587 (591)
43 TIGR01846 type_I_sec_HlyB type 100.0 7.6E-80 1.6E-84 780.6 75.9 567 8-593 125-692 (694)
44 PRK10790 putative multidrug tr 100.0 1.4E-79 2.9E-84 766.8 76.9 575 1-596 1-578 (592)
45 PRK13657 cyclic beta-1,2-gluca 100.0 1.9E-79 4.1E-84 764.1 75.8 565 649-1229 6-570 (588)
46 TIGR01192 chvA glucan exporter 100.0 3.8E-79 8.2E-84 756.8 76.6 564 650-1229 7-570 (585)
47 TIGR02868 CydC thiol reductant 100.0 9.8E-80 2.1E-84 758.4 70.0 522 654-1189 5-529 (529)
48 TIGR02204 MsbA_rel ABC transpo 100.0 4.4E-79 9.6E-84 761.6 75.8 569 652-1230 8-576 (576)
49 COG5265 ATM1 ABC-type transpor 100.0 3.4E-82 7.4E-87 688.3 41.0 492 727-1228 4-497 (497)
50 TIGR02203 MsbA_lipidA lipid A 100.0 7.5E-79 1.6E-83 759.3 75.7 564 11-593 3-568 (571)
51 PRK13657 cyclic beta-1,2-gluca 100.0 1.1E-78 2.3E-83 757.4 76.8 567 9-596 6-573 (588)
52 PRK10789 putative multidrug tr 100.0 3.9E-79 8.5E-84 756.0 72.2 537 680-1229 13-550 (569)
53 TIGR01192 chvA glucan exporter 100.0 3E-78 6.6E-83 748.8 76.6 564 10-594 7-571 (585)
54 TIGR02868 CydC thiol reductant 100.0 1.2E-78 2.6E-83 748.7 68.9 524 12-552 3-529 (529)
55 TIGR02204 MsbA_rel ABC transpo 100.0 1.4E-77 3.1E-82 748.1 75.6 569 10-593 6-575 (576)
56 PRK10789 putative multidrug tr 100.0 8.3E-78 1.8E-82 744.2 72.3 538 41-595 13-552 (569)
57 COG4987 CydC ABC-type transpor 100.0 1.1E-76 2.4E-81 667.1 65.7 553 22-591 15-571 (573)
58 TIGR02857 CydD thiol reductant 100.0 8E-77 1.7E-81 732.6 70.6 527 662-1201 3-529 (529)
59 TIGR02857 CydD thiol reductant 100.0 5.3E-76 1.1E-80 725.3 70.3 523 25-564 5-529 (529)
60 TIGR00957 MRP_assoc_pro multi 100.0 3.3E-76 7.2E-81 792.4 73.9 507 77-592 1009-1519(1522)
61 TIGR01842 type_I_sec_PrtD type 100.0 3.7E-75 7.9E-80 718.3 72.4 536 662-1218 6-543 (544)
62 PLN03130 ABC transporter C fam 100.0 1.8E-75 3.8E-80 782.9 74.2 513 75-594 955-1475(1622)
63 COG1123 ATPase components of v 100.0 1.3E-77 2.7E-82 693.2 45.6 480 354-1226 5-529 (539)
64 TIGR01842 type_I_sec_PrtD type 100.0 1.4E-74 3.1E-79 713.0 73.3 531 26-580 9-542 (544)
65 PTZ00243 ABC transporter; Prov 100.0 3.2E-74 7E-79 770.2 74.2 509 81-594 1006-1547(1560)
66 PLN03232 ABC transporter C fam 100.0 2.5E-74 5.5E-79 773.2 72.0 515 74-595 951-1473(1495)
67 COG5265 ATM1 ABC-type transpor 100.0 4.6E-76 1E-80 640.4 42.4 490 95-591 4-496 (497)
68 PRK10261 glutathione transport 100.0 1.7E-74 3.6E-79 717.7 50.3 497 354-1224 12-561 (623)
69 PRK13549 xylose transporter AT 100.0 1.5E-74 3.3E-79 705.8 45.6 462 354-1216 5-493 (506)
70 PRK15134 microcin C ABC transp 100.0 8.8E-74 1.9E-78 702.9 49.7 465 354-1218 5-516 (529)
71 KOG0054 Multidrug resistance-a 100.0 2.1E-72 4.6E-77 709.5 61.6 512 74-591 859-1373(1381)
72 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.6E-71 3.6E-76 685.2 67.1 539 649-1209 4-551 (555)
73 TIGR01194 cyc_pep_trnsptr cycl 100.0 4E-71 8.7E-76 681.8 67.1 534 8-572 3-551 (555)
74 PRK09700 D-allose transporter 100.0 3.8E-73 8.2E-78 694.9 45.9 459 354-1214 5-495 (510)
75 COG4172 ABC-type uncharacteriz 100.0 1E-72 2.2E-77 608.7 42.3 470 354-1224 6-524 (534)
76 TIGR03269 met_CoM_red_A2 methy 100.0 6.2E-73 1.3E-77 694.6 43.4 458 355-1218 1-518 (520)
77 PRK10762 D-ribose transporter 100.0 1.7E-72 3.7E-77 686.9 46.2 454 354-1216 4-483 (501)
78 COG4618 ArpD ABC-type protease 100.0 5E-71 1.1E-75 614.7 52.1 529 671-1218 32-561 (580)
79 PRK15439 autoinducer 2 ABC tra 100.0 5.5E-72 1.2E-76 682.5 47.8 466 354-1218 11-493 (510)
80 TIGR02633 xylG D-xylose ABC tr 100.0 4.8E-72 1E-76 684.1 47.1 459 355-1214 2-489 (500)
81 PRK11288 araG L-arabinose tran 100.0 2.8E-72 6.1E-77 685.0 44.7 456 354-1216 4-484 (501)
82 TIGR01271 CFTR_protein cystic 100.0 6.4E-70 1.4E-74 729.2 69.4 501 84-596 936-1455(1490)
83 TIGR01257 rim_protein retinal- 100.0 1.2E-68 2.6E-73 703.9 74.7 220 353-581 927-1150(2272)
84 PRK10982 galactose/methyl gala 100.0 2.9E-71 6.3E-76 675.1 43.8 454 357-1216 1-479 (491)
85 PRK10938 putative molybdenum t 100.0 1.4E-70 3E-75 669.6 45.7 452 355-1210 4-485 (490)
86 PRK15064 ABC transporter ATP-b 100.0 4E-69 8.7E-74 661.8 56.2 487 355-1220 2-528 (530)
87 COG4618 ArpD ABC-type protease 100.0 1.6E-68 3.5E-73 594.6 53.2 523 37-581 37-561 (580)
88 TIGR00956 3a01205 Pleiotropic 100.0 1.3E-68 2.8E-73 710.3 60.3 212 991-1213 759-989 (1394)
89 PRK10522 multidrug transporter 100.0 4.8E-66 1E-70 636.9 66.5 476 717-1219 60-541 (547)
90 PRK11819 putative ABC transpor 100.0 3.3E-67 7.1E-72 646.4 54.7 484 354-1218 6-534 (556)
91 PRK10522 multidrug transporter 100.0 1.6E-65 3.4E-70 632.4 67.0 520 15-577 6-536 (547)
92 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 8.9E-67 1.9E-71 642.8 54.5 484 354-1218 4-532 (552)
93 PRK10636 putative ABC transpor 100.0 2.5E-65 5.5E-70 635.4 54.0 484 355-1217 2-517 (638)
94 PLN03140 ABC transporter G fam 100.0 3.2E-64 7E-69 664.1 58.9 214 990-1213 866-1106(1470)
95 TIGR00954 3a01203 Peroxysomal 100.0 2.4E-63 5.3E-68 619.9 61.9 530 9-566 78-653 (659)
96 PRK11147 ABC transporter ATPas 100.0 7.6E-64 1.7E-68 624.5 55.1 201 991-1217 319-528 (635)
97 PLN03073 ABC transporter F fam 100.0 3.1E-64 6.8E-69 625.3 48.9 200 991-1216 508-713 (718)
98 TIGR00954 3a01203 Peroxysomal 100.0 3.2E-62 7E-67 609.8 63.4 535 649-1203 78-653 (659)
99 COG1129 MglA ABC-type sugar tr 100.0 4E-63 8.6E-68 569.5 41.5 455 354-1209 8-482 (500)
100 PRK13409 putative ATPase RIL; 100.0 1.6E-63 3.5E-68 609.2 38.1 436 359-1211 78-536 (590)
101 COG0488 Uup ATPase components 100.0 1.9E-61 4.2E-66 573.2 48.0 490 354-1220 3-528 (530)
102 COG3845 ABC-type uncharacteriz 100.0 1.9E-60 4.1E-65 533.2 40.1 461 354-1214 4-489 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 5.4E-54 1.2E-58 477.8 27.2 236 990-1228 1-236 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 3.3E-52 7.1E-57 419.5 22.6 220 354-583 2-228 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 8E-51 1.7E-55 409.4 21.6 215 991-1219 2-227 (240)
106 PRK14257 phosphate ABC transpo 100.0 1.1E-49 2.4E-54 454.8 26.9 228 985-1220 74-316 (329)
107 COG1125 OpuBA ABC-type proline 100.0 1E-49 2.2E-54 408.4 20.8 224 355-588 2-233 (309)
108 COG1135 AbcC ABC-type metal io 100.0 1.6E-49 3.4E-54 420.5 22.5 223 355-584 2-235 (339)
109 KOG0927 Predicted transporter 100.0 1.1E-48 2.5E-53 438.6 28.1 197 991-1212 389-591 (614)
110 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.8E-48 4E-53 433.5 27.9 236 353-592 1-236 (275)
111 COG1117 PstB ABC-type phosphat 100.0 2.4E-49 5.3E-54 396.0 18.6 218 991-1218 7-238 (253)
112 COG1135 AbcC ABC-type metal io 100.0 6.1E-49 1.3E-53 416.1 21.8 217 992-1219 2-233 (339)
113 COG1117 PstB ABC-type phosphat 100.0 5.5E-49 1.2E-53 393.4 19.6 221 353-583 6-240 (253)
114 cd03252 ABCC_Hemolysin The ABC 100.0 3.5E-47 7.7E-52 419.5 27.5 237 992-1229 1-237 (237)
115 cd03288 ABCC_SUR2 The SUR doma 100.0 2.1E-46 4.6E-51 417.3 29.4 242 987-1230 15-257 (257)
116 COG4615 PvdE ABC-type sideroph 100.0 8.9E-44 1.9E-48 383.0 48.3 471 78-572 53-529 (546)
117 COG1125 OpuBA ABC-type proline 100.0 3.2E-47 6.8E-52 390.1 19.1 214 992-1219 2-227 (309)
118 PRK14257 phosphate ABC transpo 100.0 3.7E-46 8E-51 425.9 28.0 228 351-581 77-314 (329)
119 cd03253 ABCC_ATM1_transporter 100.0 1.7E-45 3.7E-50 406.1 27.3 236 992-1229 1-236 (236)
120 cd03251 ABCC_MsbA MsbA is an e 100.0 1.7E-45 3.7E-50 405.5 27.0 233 992-1225 1-233 (234)
121 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.4E-45 5.2E-50 405.2 27.1 237 992-1228 1-237 (238)
122 cd03252 ABCC_Hemolysin The ABC 100.0 3.4E-45 7.5E-50 403.7 28.2 234 355-590 1-234 (237)
123 COG1127 Ttg2A ABC-type transpo 100.0 1E-45 2.2E-50 378.5 21.6 223 353-586 7-240 (263)
124 cd03254 ABCC_Glucan_exporter_l 100.0 2.9E-45 6.4E-50 402.2 26.8 229 990-1220 1-229 (229)
125 COG1120 FepC ABC-type cobalami 100.0 6.7E-46 1.5E-50 396.4 20.8 223 354-581 2-229 (258)
126 cd03244 ABCC_MRP_domain2 Domai 100.0 4E-45 8.6E-50 398.9 26.5 221 990-1212 1-221 (221)
127 COG3638 ABC-type phosphate/pho 100.0 1.2E-45 2.5E-50 377.1 19.7 222 354-579 3-236 (258)
128 COG3839 MalK ABC-type sugar tr 100.0 2.2E-45 4.7E-50 407.6 22.5 221 354-586 3-229 (338)
129 COG1136 SalX ABC-type antimicr 100.0 4.1E-45 8.9E-50 382.8 23.2 210 355-571 2-222 (226)
130 KOG0062 ATPase component of AB 100.0 1.9E-44 4.1E-49 402.6 27.8 195 990-1208 361-559 (582)
131 cd03288 ABCC_SUR2 The SUR doma 100.0 2.8E-44 6.1E-49 400.2 28.9 240 350-591 15-254 (257)
132 COG3842 PotA ABC-type spermidi 100.0 2.5E-45 5.4E-50 409.4 20.2 223 353-587 4-233 (352)
133 PRK13631 cbiO cobalt transport 100.0 1.8E-44 3.8E-49 411.0 27.4 220 991-1217 21-265 (320)
134 COG4178 ABC-type uncharacteriz 100.0 3.6E-41 7.7E-46 395.3 54.9 480 706-1203 87-588 (604)
135 COG2884 FtsE Predicted ATPase 100.0 5.3E-45 1.2E-49 358.3 18.8 207 355-574 2-220 (223)
136 COG3840 ThiQ ABC-type thiamine 100.0 6.5E-45 1.4E-49 354.0 19.2 209 355-581 2-220 (231)
137 COG1120 FepC ABC-type cobalami 100.0 8.3E-45 1.8E-49 388.1 21.8 214 991-1218 2-229 (258)
138 COG1116 TauB ABC-type nitrate/ 100.0 8.5E-45 1.8E-49 379.1 21.2 199 354-567 3-207 (248)
139 COG1122 CbiO ABC-type cobalt t 100.0 1E-44 2.2E-49 389.0 22.3 216 991-1219 3-230 (235)
140 TIGR02314 ABC_MetN D-methionin 100.0 1.2E-44 2.6E-49 413.6 23.9 216 992-1218 2-231 (343)
141 cd03245 ABCC_bacteriocin_expor 100.0 4.6E-44 9.9E-49 390.3 26.7 220 990-1210 1-220 (220)
142 COG2884 FtsE Predicted ATPase 100.0 7.4E-45 1.6E-49 357.3 17.9 208 992-1212 2-221 (223)
143 cd03254 ABCC_Glucan_exporter_l 100.0 7.6E-44 1.7E-48 391.0 27.7 226 353-580 1-226 (229)
144 cd03253 ABCC_ATM1_transporter 100.0 8.1E-44 1.7E-48 392.7 27.9 233 355-590 1-233 (236)
145 TIGR02314 ABC_MetN D-methionin 100.0 2.9E-44 6.4E-49 410.3 25.2 225 355-586 2-236 (343)
146 COG4615 PvdE ABC-type sideroph 100.0 2.9E-41 6.3E-46 363.7 46.5 475 707-1209 50-529 (546)
147 COG1124 DppF ABC-type dipeptid 100.0 1.5E-44 3.3E-49 372.6 20.3 224 991-1224 3-239 (252)
148 cd03251 ABCC_MsbA MsbA is an e 100.0 7.1E-44 1.5E-48 392.7 27.1 230 355-586 1-230 (234)
149 KOG0065 Pleiotropic drug resis 100.0 5E-43 1.1E-47 430.9 36.9 199 1006-1214 803-1018(1391)
150 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.1E-43 2.4E-48 392.0 27.8 227 355-581 1-227 (238)
151 COG1124 DppF ABC-type dipeptid 100.0 4.5E-44 9.8E-49 369.1 21.9 229 354-589 3-240 (252)
152 COG1127 Ttg2A ABC-type transpo 100.0 5.6E-44 1.2E-48 365.8 22.1 221 991-1224 8-242 (263)
153 COG1122 CbiO ABC-type cobalt t 100.0 4.6E-44 1E-48 383.9 22.4 219 354-581 3-229 (235)
154 COG3840 ThiQ ABC-type thiamine 100.0 4E-44 8.8E-49 348.5 19.4 212 992-1221 2-223 (231)
155 COG3839 MalK ABC-type sugar tr 100.0 5.6E-44 1.2E-48 396.4 22.8 213 991-1219 3-225 (338)
156 cd03248 ABCC_TAP TAP, the Tran 100.0 9.7E-44 2.1E-48 389.2 24.3 219 988-1206 8-226 (226)
157 cd03261 ABC_Org_Solvent_Resist 100.0 6.2E-44 1.3E-48 393.0 22.9 218 992-1223 1-232 (235)
158 cd03244 ABCC_MRP_domain2 Domai 100.0 2.1E-43 4.6E-48 385.3 26.8 220 353-574 1-220 (221)
159 PRK13650 cbiO cobalt transport 100.0 1.5E-43 3.3E-48 398.3 24.6 218 991-1219 4-231 (279)
160 COG3638 ABC-type phosphate/pho 100.0 1.2E-43 2.5E-48 362.4 20.9 215 991-1218 3-238 (258)
161 COG1136 SalX ABC-type antimicr 100.0 2.8E-43 6E-48 369.0 24.3 207 992-1208 2-222 (226)
162 cd03260 ABC_PstB_phosphate_tra 100.0 9.1E-44 2E-48 389.7 21.6 212 992-1215 1-227 (227)
163 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.6E-43 3.5E-48 375.8 22.6 210 991-1218 4-228 (254)
164 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.6E-43 3.6E-48 375.7 22.4 209 354-580 4-227 (254)
165 cd03369 ABCC_NFT1 Domain 2 of 100.0 4.7E-43 1E-47 378.1 25.5 206 987-1212 2-207 (207)
166 cd03245 ABCC_bacteriocin_expor 100.0 7.1E-43 1.5E-47 380.9 26.9 220 353-573 1-220 (220)
167 PRK13631 cbiO cobalt transport 100.0 5.4E-43 1.2E-47 398.8 26.3 222 353-581 20-266 (320)
168 PRK14269 phosphate ABC transpo 100.0 3.7E-43 7.9E-48 389.2 24.0 218 991-1218 2-231 (246)
169 COG1118 CysA ABC-type sulfate/ 100.0 9.8E-44 2.1E-48 375.2 18.0 221 354-584 2-231 (345)
170 cd03248 ABCC_TAP TAP, the Tran 100.0 1E-42 2.3E-47 381.0 25.2 220 350-569 7-226 (226)
171 COG1116 TauB ABC-type nitrate/ 100.0 4.1E-43 8.8E-48 366.5 20.7 198 991-1207 3-212 (248)
172 PRK13637 cbiO cobalt transport 100.0 7E-43 1.5E-47 394.3 23.9 218 992-1218 3-235 (287)
173 cd03261 ABC_Org_Solvent_Resist 100.0 1.3E-42 2.8E-47 382.5 25.3 216 355-580 1-226 (235)
174 PRK14250 phosphate ABC transpo 100.0 1.6E-42 3.4E-47 382.6 25.8 215 991-1219 3-223 (241)
175 COG3842 PotA ABC-type spermidi 100.0 2.7E-43 5.9E-48 393.1 19.4 213 991-1219 5-228 (352)
176 PRK13647 cbiO cobalt transport 100.0 1.3E-42 2.8E-47 389.7 24.7 213 991-1216 4-226 (274)
177 cd03219 ABC_Mj1267_LivG_branch 100.0 8.9E-43 1.9E-47 384.4 22.4 217 992-1218 1-233 (236)
178 COG4178 ABC-type uncharacteriz 100.0 3.8E-39 8.3E-44 378.2 54.1 471 76-565 89-587 (604)
179 PRK13635 cbiO cobalt transport 100.0 1.3E-42 2.9E-47 390.3 24.0 217 991-1219 5-231 (279)
180 PRK11432 fbpC ferric transport 100.0 2.5E-42 5.5E-47 396.8 26.4 221 354-586 6-232 (351)
181 PRK11650 ugpC glycerol-3-phosp 100.0 2E-42 4.4E-47 398.9 25.7 220 354-584 3-228 (356)
182 PRK11153 metN DL-methionine tr 100.0 1.2E-42 2.6E-47 400.9 23.6 216 992-1218 2-231 (343)
183 PRK11432 fbpC ferric transport 100.0 1.2E-42 2.7E-47 399.4 23.2 213 991-1219 6-228 (351)
184 PRK13646 cbiO cobalt transport 100.0 3E-42 6.4E-47 389.3 25.6 221 992-1219 3-237 (286)
185 PRK14242 phosphate transporter 100.0 1.9E-42 4.1E-47 385.7 23.7 218 991-1218 6-238 (253)
186 PRK13642 cbiO cobalt transport 100.0 2.7E-42 5.9E-47 388.1 25.2 219 991-1220 4-232 (277)
187 PRK10744 pstB phosphate transp 100.0 3E-42 6.5E-47 384.9 25.3 220 989-1218 11-245 (260)
188 PRK13643 cbiO cobalt transport 100.0 2.3E-42 5.1E-47 390.2 24.7 216 992-1218 2-234 (288)
189 PRK14273 phosphate ABC transpo 100.0 2.9E-42 6.3E-47 384.1 25.0 218 991-1218 7-239 (254)
190 cd03256 ABC_PhnC_transporter A 100.0 2.4E-42 5.1E-47 382.5 24.0 213 992-1217 1-234 (241)
191 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-42 2.5E-47 377.9 20.7 203 992-1206 2-216 (216)
192 TIGR00972 3a0107s01c2 phosphat 100.0 2.8E-42 6E-47 382.6 24.1 217 992-1218 2-233 (247)
193 cd03296 ABC_CysA_sulfate_impor 100.0 2E-42 4.3E-47 381.9 22.7 212 992-1219 3-228 (239)
194 cd03263 ABC_subfamily_A The AB 100.0 2E-42 4.4E-47 377.3 22.4 211 992-1215 1-219 (220)
195 TIGR01186 proV glycine betaine 100.0 1.6E-42 3.5E-47 397.8 22.6 201 1007-1218 6-220 (363)
196 PRK11650 ugpC glycerol-3-phosp 100.0 3.1E-42 6.8E-47 397.3 24.9 214 991-1219 3-226 (356)
197 TIGR01186 proV glycine betaine 100.0 2E-42 4.2E-47 397.2 22.8 211 370-587 6-226 (363)
198 TIGR03265 PhnT2 putative 2-ami 100.0 2.3E-42 4.9E-47 398.0 23.3 213 991-1219 4-226 (353)
199 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.5E-41 3.3E-46 379.4 29.2 220 988-1226 36-256 (282)
200 TIGR03265 PhnT2 putative 2-ami 100.0 3.3E-42 7.2E-47 396.7 24.6 221 354-586 4-230 (353)
201 PRK13636 cbiO cobalt transport 100.0 3.5E-42 7.5E-47 388.1 24.2 215 991-1218 5-232 (283)
202 PRK13650 cbiO cobalt transport 100.0 5.1E-42 1.1E-46 386.0 25.4 221 354-581 4-230 (279)
203 cd03258 ABC_MetN_methionine_tr 100.0 3.7E-42 8E-47 378.5 23.5 216 992-1218 2-231 (233)
204 PRK13634 cbiO cobalt transport 100.0 2.6E-42 5.6E-47 390.2 22.9 217 992-1218 3-236 (290)
205 PRK11153 metN DL-methionine tr 100.0 4.9E-42 1.1E-46 395.8 25.3 225 355-586 2-236 (343)
206 TIGR02315 ABC_phnC phosphonate 100.0 4.2E-42 9.1E-47 380.8 23.8 213 992-1217 2-235 (243)
207 cd03219 ABC_Mj1267_LivG_branch 100.0 3.4E-42 7.4E-47 379.8 22.9 221 355-580 1-232 (236)
208 cd03224 ABC_TM1139_LivF_branch 100.0 3.9E-42 8.5E-47 375.8 23.2 217 992-1217 1-221 (222)
209 PRK09536 btuD corrinoid ABC tr 100.0 3.8E-42 8.3E-47 399.5 24.4 214 991-1218 3-229 (402)
210 PRK14269 phosphate ABC transpo 100.0 5.9E-42 1.3E-46 379.5 24.5 218 354-581 2-231 (246)
211 PRK13633 cobalt transporter AT 100.0 4.4E-42 9.5E-47 387.0 23.9 218 991-1219 4-235 (280)
212 cd03260 ABC_PstB_phosphate_tra 100.0 3.1E-42 6.6E-47 377.6 21.9 214 355-578 1-227 (227)
213 PRK13637 cbiO cobalt transport 100.0 1E-41 2.2E-46 384.8 26.6 219 355-580 3-234 (287)
214 PRK14235 phosphate transporter 100.0 5.8E-42 1.3E-46 383.6 24.2 221 988-1218 16-252 (267)
215 PRK14250 phosphate ABC transpo 100.0 1.2E-41 2.5E-46 375.7 26.1 223 354-588 3-229 (241)
216 cd03259 ABC_Carb_Solutes_like 100.0 2.3E-42 5E-47 374.7 20.1 203 992-1210 1-213 (213)
217 PRK14267 phosphate ABC transpo 100.0 4.1E-42 8.9E-47 382.9 22.5 219 991-1219 4-239 (253)
218 PRK10851 sulfate/thiosulfate t 100.0 5E-42 1.1E-46 395.2 23.7 213 991-1219 2-228 (353)
219 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.8E-42 6.2E-47 386.2 21.1 212 993-1218 26-251 (269)
220 PRK13643 cbiO cobalt transport 100.0 8.1E-42 1.8E-46 385.8 24.9 219 355-580 2-233 (288)
221 cd03250 ABCC_MRP_domain1 Domai 100.0 8.3E-42 1.8E-46 367.6 23.6 200 992-1205 1-204 (204)
222 PRK10851 sulfate/thiosulfate t 100.0 1E-41 2.2E-46 392.6 25.5 221 354-586 2-232 (353)
223 PRK13651 cobalt transporter AT 100.0 8.2E-42 1.8E-46 386.9 24.3 216 992-1218 3-255 (305)
224 PRK13652 cbiO cobalt transport 100.0 8.4E-42 1.8E-46 384.1 24.2 215 992-1219 4-229 (277)
225 PRK13632 cbiO cobalt transport 100.0 8.6E-42 1.9E-46 383.1 24.2 217 991-1219 7-233 (271)
226 PRK11629 lolD lipoprotein tran 100.0 6E-42 1.3E-46 376.5 22.5 210 991-1211 5-228 (233)
227 PRK13640 cbiO cobalt transport 100.0 1.2E-41 2.7E-46 383.5 25.5 217 990-1218 4-233 (282)
228 TIGR00972 3a0107s01c2 phosphat 100.0 1.6E-41 3.6E-46 376.5 25.9 217 355-581 2-233 (247)
229 PRK09452 potA putrescine/sperm 100.0 9.4E-42 2E-46 394.4 24.9 213 991-1219 14-236 (375)
230 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.7E-42 1.7E-46 376.4 22.9 216 992-1218 2-222 (236)
231 PRK14247 phosphate ABC transpo 100.0 7.8E-42 1.7E-46 380.0 23.1 218 991-1218 3-235 (250)
232 PRK14237 phosphate transporter 100.0 1E-41 2.3E-46 381.5 24.1 219 990-1218 19-252 (267)
233 PRK13634 cbiO cobalt transport 100.0 2E-41 4.2E-46 383.1 26.4 219 355-580 3-235 (290)
234 TIGR03258 PhnT 2-aminoethylpho 100.0 6.8E-42 1.5E-46 394.4 23.0 214 990-1219 4-230 (362)
235 TIGR03258 PhnT 2-aminoethylpho 100.0 1.1E-41 2.3E-46 392.7 24.7 222 352-585 3-233 (362)
236 PRK13646 cbiO cobalt transport 100.0 1.4E-41 3E-46 383.9 24.9 221 354-581 2-236 (286)
237 PRK14236 phosphate transporter 100.0 1.2E-41 2.6E-46 382.1 24.2 220 989-1218 23-257 (272)
238 cd03264 ABC_drug_resistance_li 100.0 8.6E-42 1.9E-46 369.6 22.2 203 992-1210 1-211 (211)
239 PRK09452 potA putrescine/sperm 100.0 1.4E-41 3E-46 393.0 25.2 220 353-584 13-238 (375)
240 cd03296 ABC_CysA_sulfate_impor 100.0 1.3E-41 2.7E-46 375.4 23.7 215 355-581 3-227 (239)
241 PRK15079 oligopeptide ABC tran 100.0 1.2E-41 2.6E-46 389.1 24.3 224 991-1224 8-259 (331)
242 cd03266 ABC_NatA_sodium_export 100.0 1.1E-41 2.4E-46 371.0 22.9 207 992-1210 2-218 (218)
243 cd03226 ABC_cobalt_CbiO_domain 100.0 5.1E-42 1.1E-46 369.5 19.9 199 993-1207 1-205 (205)
244 PRK10575 iron-hydroxamate tran 100.0 1.3E-41 2.8E-46 380.7 23.5 214 991-1218 11-238 (265)
245 PRK14244 phosphate ABC transpo 100.0 7E-42 1.5E-46 380.3 21.3 217 992-1218 6-238 (251)
246 cd03256 ABC_PhnC_transporter A 100.0 1.5E-41 3.2E-46 376.1 23.7 221 355-579 1-233 (241)
247 TIGR03005 ectoine_ehuA ectoine 100.0 1.2E-41 2.6E-46 378.7 23.1 213 992-1218 1-237 (252)
248 cd03295 ABC_OpuCA_Osmoprotecti 100.0 8.8E-42 1.9E-46 377.4 21.9 216 992-1218 1-226 (242)
249 PRK14268 phosphate ABC transpo 100.0 1.3E-41 2.7E-46 379.5 23.2 218 991-1218 12-243 (258)
250 PRK14240 phosphate transporter 100.0 1.6E-41 3.6E-46 377.4 23.8 219 990-1218 2-235 (250)
251 PRK14239 phosphate transporter 100.0 1.5E-41 3.3E-46 378.4 23.5 218 991-1218 5-237 (252)
252 cd03247 ABCC_cytochrome_bd The 100.0 1.2E-41 2.5E-46 357.7 21.2 178 992-1210 1-178 (178)
253 PRK14251 phosphate ABC transpo 100.0 1.1E-41 2.5E-46 378.9 22.4 219 991-1219 4-237 (251)
254 cd03224 ABC_TM1139_LivF_branch 100.0 1.6E-41 3.5E-46 370.9 23.1 217 355-580 1-221 (222)
255 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.6E-42 1.7E-46 372.2 20.5 204 992-1206 1-218 (218)
256 PRK13644 cbiO cobalt transport 100.0 2.1E-41 4.7E-46 379.9 24.7 214 992-1218 2-225 (274)
257 cd03265 ABC_DrrA DrrA is the A 100.0 1.5E-41 3.3E-46 370.0 22.8 209 992-1215 1-219 (220)
258 PRK13647 cbiO cobalt transport 100.0 2.1E-41 4.5E-46 380.0 24.5 216 354-578 4-225 (274)
259 cd03218 ABC_YhbG The ABC trans 100.0 1.1E-41 2.4E-46 374.7 21.8 217 992-1218 1-223 (232)
260 PRK13648 cbiO cobalt transport 100.0 2.2E-41 4.7E-46 379.7 24.7 217 991-1219 7-233 (269)
261 PRK14245 phosphate ABC transpo 100.0 1.4E-41 2.9E-46 377.8 22.7 218 991-1218 3-235 (250)
262 PRK14274 phosphate ABC transpo 100.0 2.2E-41 4.8E-46 377.9 24.5 218 991-1218 12-244 (259)
263 PRK11000 maltose/maltodextrin 100.0 1.5E-41 3.2E-46 394.7 24.0 212 991-1218 3-224 (369)
264 cd03268 ABC_BcrA_bacitracin_re 100.0 1.5E-41 3.2E-46 367.0 22.2 203 992-1210 1-208 (208)
265 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.2E-41 4.9E-46 374.2 24.1 218 355-581 1-226 (242)
266 PRK10619 histidine/lysine/argi 100.0 2E-41 4.3E-46 377.9 23.9 216 990-1218 4-242 (257)
267 PRK14262 phosphate ABC transpo 100.0 1.7E-41 3.6E-46 377.3 23.2 225 991-1225 3-243 (250)
268 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-41 2.4E-46 374.0 21.3 212 992-1216 1-220 (230)
269 cd03258 ABC_MetN_methionine_tr 100.0 1.9E-41 4.1E-46 372.9 23.2 219 355-580 2-230 (233)
270 TIGR02315 ABC_phnC phosphonate 100.0 2.6E-41 5.6E-46 374.5 24.4 221 355-579 2-234 (243)
271 PRK14248 phosphate ABC transpo 100.0 2E-41 4.3E-46 380.1 23.7 218 991-1218 21-253 (268)
272 PRK14259 phosphate ABC transpo 100.0 2.9E-41 6.3E-46 378.1 25.0 219 990-1218 12-254 (269)
273 PRK13651 cobalt transporter AT 100.0 2.4E-41 5.2E-46 383.1 24.5 220 355-581 3-255 (305)
274 TIGR03411 urea_trans_UrtD urea 100.0 2.1E-41 4.6E-46 374.8 23.5 212 992-1217 3-231 (242)
275 TIGR02211 LolD_lipo_ex lipopro 100.0 1.8E-41 3.8E-46 370.2 22.5 205 992-1207 2-220 (221)
276 PRK09493 glnQ glutamine ABC tr 100.0 2.1E-41 4.6E-46 374.1 23.3 213 992-1218 2-226 (240)
277 cd03369 ABCC_NFT1 Domain 2 of 100.0 5.1E-41 1.1E-45 362.3 25.7 203 353-575 5-207 (207)
278 cd03263 ABC_subfamily_A The AB 100.0 1.6E-41 3.5E-46 370.2 22.0 215 355-578 1-219 (220)
279 PRK14242 phosphate transporter 100.0 2.5E-41 5.5E-46 376.6 24.0 220 354-581 6-238 (253)
280 COG4175 ProV ABC-type proline/ 100.0 9E-42 1.9E-46 359.9 19.1 230 354-590 4-264 (386)
281 cd03259 ABC_Carb_Solutes_like 100.0 1.3E-41 2.8E-46 368.8 21.1 207 355-573 1-213 (213)
282 PRK11831 putative ABC transpor 100.0 2.2E-41 4.8E-46 379.3 23.5 214 991-1218 7-234 (269)
283 PRK15079 oligopeptide ABC tran 100.0 3.8E-41 8.3E-46 385.0 25.9 229 354-589 8-260 (331)
284 PRK14273 phosphate ABC transpo 100.0 4.1E-41 8.9E-46 374.9 25.4 223 354-586 7-244 (254)
285 cd03301 ABC_MalK_N The N-termi 100.0 1.4E-41 3E-46 368.8 20.9 203 992-1210 1-213 (213)
286 PRK14256 phosphate ABC transpo 100.0 3E-41 6.4E-46 375.6 23.9 220 989-1218 2-237 (252)
287 PRK13537 nodulation ABC transp 100.0 2.7E-41 5.8E-46 383.8 24.0 214 990-1218 6-228 (306)
288 PRK14249 phosphate ABC transpo 100.0 3.7E-41 8.1E-46 374.5 24.6 218 991-1218 4-236 (251)
289 PRK09536 btuD corrinoid ABC tr 100.0 3.6E-41 7.7E-46 391.3 25.5 221 354-580 3-228 (402)
290 TIGR00960 3a0501s02 Type II (G 100.0 1.6E-41 3.5E-46 368.9 21.2 207 355-569 2-216 (216)
291 PRK10744 pstB phosphate transp 100.0 5E-41 1.1E-45 375.1 25.6 222 352-581 11-245 (260)
292 PRK11231 fecE iron-dicitrate t 100.0 3E-41 6.4E-46 376.0 23.4 213 992-1218 3-228 (255)
293 PRK13649 cbiO cobalt transport 100.0 5.4E-41 1.2E-45 379.0 25.7 217 992-1218 3-235 (280)
294 PRK11000 maltose/maltodextrin 100.0 3.2E-41 7E-46 391.9 24.4 218 354-583 3-226 (369)
295 PRK10070 glycine betaine trans 100.0 2.6E-41 5.7E-46 392.2 23.5 199 1009-1218 43-255 (400)
296 PRK11264 putative amino-acid A 100.0 5.7E-41 1.2E-45 373.3 25.2 213 992-1218 4-234 (250)
297 PRK13638 cbiO cobalt transport 100.0 3.5E-41 7.6E-46 378.5 23.7 213 992-1218 2-226 (271)
298 PRK14270 phosphate ABC transpo 100.0 4.1E-41 8.8E-46 374.2 23.9 218 991-1218 4-236 (251)
299 cd03218 ABC_YhbG The ABC trans 100.0 3.2E-41 6.8E-46 371.1 22.8 216 355-580 1-222 (232)
300 TIGR02769 nickel_nikE nickel i 100.0 3.8E-41 8.3E-46 376.9 23.8 222 992-1223 3-246 (265)
301 PRK11614 livF leucine/isoleuci 100.0 5.4E-41 1.2E-45 370.1 24.6 219 991-1218 5-227 (237)
302 PRK14238 phosphate transporter 100.0 3.7E-41 8E-46 377.6 23.6 218 991-1218 24-256 (271)
303 PRK13642 cbiO cobalt transport 100.0 7E-41 1.5E-45 376.6 25.9 221 354-581 4-230 (277)
304 PRK11124 artP arginine transpo 100.0 3.6E-41 7.7E-46 372.8 23.2 213 992-1218 3-231 (242)
305 PRK11308 dppF dipeptide transp 100.0 3.4E-41 7.4E-46 385.2 23.6 224 991-1224 5-252 (327)
306 PRK13645 cbiO cobalt transport 100.0 4.7E-41 1E-45 380.8 24.6 220 989-1218 4-241 (289)
307 TIGR02673 FtsE cell division A 100.0 2.2E-41 4.7E-46 367.5 20.9 201 992-1205 2-214 (214)
308 PRK14261 phosphate ABC transpo 100.0 4.6E-41 1E-45 374.3 23.9 219 991-1219 6-239 (253)
309 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5E-41 1.1E-45 369.9 23.9 216 355-581 2-222 (236)
310 cd03225 ABC_cobalt_CbiO_domain 100.0 2.2E-41 4.8E-46 366.6 20.6 201 993-1205 1-211 (211)
311 PRK14235 phosphate transporter 100.0 6E-41 1.3E-45 375.4 24.7 220 352-581 17-252 (267)
312 PRK11022 dppD dipeptide transp 100.0 3.9E-41 8.5E-46 385.0 23.7 225 992-1224 4-251 (326)
313 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.7E-41 3.6E-46 369.7 19.7 205 992-1212 1-218 (220)
314 PRK11607 potG putrescine trans 100.0 5.4E-41 1.2E-45 389.0 25.0 222 353-586 18-245 (377)
315 cd03292 ABC_FtsE_transporter F 100.0 2.9E-41 6.3E-46 366.7 21.4 202 992-1206 1-214 (214)
316 PRK13636 cbiO cobalt transport 100.0 6.8E-41 1.5E-45 377.6 25.2 218 354-580 5-231 (283)
317 COG4555 NatA ABC-type Na+ tran 100.0 1.4E-41 3.1E-46 336.6 17.1 219 355-581 2-223 (245)
318 PRK11247 ssuB aliphatic sulfon 100.0 4.7E-41 1E-45 372.0 23.3 204 991-1213 12-219 (257)
319 PRK11629 lolD lipoprotein tran 100.0 8.9E-41 1.9E-45 367.2 25.4 214 354-574 5-228 (233)
320 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.3E-41 5E-46 368.4 20.5 208 355-569 1-218 (218)
321 PRK13537 nodulation ABC transp 100.0 4.3E-41 9.3E-46 382.1 23.4 217 354-581 7-228 (306)
322 PRK14271 phosphate ABC transpo 100.0 8.4E-41 1.8E-45 375.1 25.3 219 991-1219 21-253 (276)
323 PRK14260 phosphate ABC transpo 100.0 5E-41 1.1E-45 374.9 23.3 219 990-1218 6-244 (259)
324 PRK13641 cbiO cobalt transport 100.0 7.2E-41 1.6E-45 378.2 24.8 218 991-1218 2-235 (287)
325 TIGR00968 3a0106s01 sulfate AB 100.0 6.1E-41 1.3E-45 369.0 23.6 211 992-1218 1-221 (237)
326 PRK14243 phosphate transporter 100.0 7.3E-41 1.6E-45 374.1 24.5 218 991-1218 10-249 (264)
327 PRK11607 potG putrescine trans 100.0 3.7E-41 8.1E-46 390.3 22.9 214 990-1219 18-241 (377)
328 PRK13635 cbiO cobalt transport 100.0 9E-41 2E-45 375.5 25.3 219 354-580 5-229 (279)
329 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.1E-41 8.8E-46 376.9 22.4 222 356-587 26-257 (269)
330 TIGR02769 nickel_nikE nickel i 100.0 6.2E-41 1.3E-45 375.2 23.8 220 355-581 3-241 (265)
331 PRK11831 putative ABC transpor 100.0 5.9E-41 1.3E-45 375.9 23.5 227 354-590 7-243 (269)
332 PRK14266 phosphate ABC transpo 100.0 7.8E-41 1.7E-45 372.0 24.2 217 992-1218 4-235 (250)
333 cd03266 ABC_NatA_sodium_export 100.0 5.1E-41 1.1E-45 365.7 22.3 211 355-573 2-218 (218)
334 cd03300 ABC_PotA_N PotA is an 100.0 3.5E-41 7.5E-46 370.0 21.0 211 992-1218 1-221 (232)
335 PRK14267 phosphate ABC transpo 100.0 6.1E-41 1.3E-45 373.5 23.3 220 354-581 4-238 (253)
336 cd03290 ABCC_SUR1_N The SUR do 100.0 8E-41 1.7E-45 363.9 23.6 210 993-1205 2-218 (218)
337 PRK13548 hmuV hemin importer A 100.0 1.1E-40 2.5E-45 371.2 25.3 213 992-1218 3-231 (258)
338 PRK14253 phosphate ABC transpo 100.0 8.3E-41 1.8E-45 371.5 24.1 218 991-1218 3-234 (249)
339 PRK14247 phosphate ABC transpo 100.0 1.1E-40 2.3E-45 370.9 24.9 218 354-581 3-235 (250)
340 TIGR03873 F420-0_ABC_ATP propo 100.0 7.9E-41 1.7E-45 372.8 23.9 213 992-1218 2-227 (256)
341 PRK13639 cbiO cobalt transport 100.0 5.1E-41 1.1E-45 377.4 22.5 214 992-1218 2-227 (275)
342 PRK14241 phosphate transporter 100.0 6.1E-41 1.3E-45 374.2 23.0 218 991-1218 4-243 (258)
343 PRK14254 phosphate ABC transpo 100.0 9.9E-41 2.1E-45 376.0 24.8 218 991-1218 39-270 (285)
344 PRK10253 iron-enterobactin tra 100.0 1.1E-40 2.4E-45 373.1 25.1 214 991-1218 7-234 (265)
345 TIGR03005 ectoine_ehuA ectoine 100.0 7.8E-41 1.7E-45 372.2 23.6 219 355-583 1-239 (252)
346 cd03265 ABC_DrrA DrrA is the A 100.0 5.7E-41 1.2E-45 365.5 22.0 213 355-578 1-219 (220)
347 PRK10070 glycine betaine trans 100.0 9E-41 2E-45 387.7 25.0 210 371-587 42-261 (400)
348 cd03291 ABCC_CFTR1 The CFTR su 100.0 4.3E-40 9.3E-45 367.8 29.5 220 350-589 35-255 (282)
349 cd03235 ABC_Metallic_Cations A 100.0 3.1E-41 6.7E-46 365.9 19.7 198 993-1210 1-213 (213)
350 PRK11300 livG leucine/isoleuci 100.0 8.9E-41 1.9E-45 372.8 23.9 221 991-1218 5-244 (255)
351 PRK10771 thiQ thiamine transpo 100.0 1.2E-40 2.7E-45 365.8 24.6 211 992-1220 2-222 (232)
352 TIGR01288 nodI ATP-binding ABC 100.0 7.4E-41 1.6E-45 381.1 23.6 213 991-1218 4-225 (303)
353 PRK09493 glnQ glutamine ABC tr 100.0 1E-40 2.3E-45 368.6 23.9 217 355-581 2-226 (240)
354 PRK11264 putative amino-acid A 100.0 2E-40 4.4E-45 368.8 26.4 217 355-581 4-234 (250)
355 PRK13644 cbiO cobalt transport 100.0 1.8E-40 3.9E-45 372.4 26.1 217 355-580 2-224 (274)
356 cd03246 ABCC_Protease_Secretio 100.0 6.7E-41 1.5E-45 350.0 21.1 172 992-1206 1-173 (173)
357 TIGR03415 ABC_choXWV_ATP choli 100.0 7.4E-41 1.6E-45 385.5 23.4 212 370-588 37-262 (382)
358 PRK11614 livF leucine/isoleuci 100.0 1.2E-40 2.6E-45 367.4 24.1 218 354-580 5-226 (237)
359 PRK14268 phosphate ABC transpo 100.0 1.3E-40 2.9E-45 371.2 24.7 225 354-586 12-248 (258)
360 PRK10584 putative ABC transpor 100.0 9.4E-41 2E-45 366.1 23.2 208 991-1209 6-227 (228)
361 PRK14252 phosphate ABC transpo 100.0 1.1E-40 2.4E-45 373.4 24.1 221 988-1218 13-250 (265)
362 cd03264 ABC_drug_resistance_li 100.0 8.9E-41 1.9E-45 361.7 22.6 207 355-573 1-211 (211)
363 cd03250 ABCC_MRP_domain1 Domai 100.0 1.2E-40 2.7E-45 358.4 23.4 200 355-568 1-204 (204)
364 PRK10247 putative ABC transpor 100.0 6.7E-41 1.5E-45 365.6 21.7 210 991-1213 7-223 (225)
365 PRK10908 cell division protein 100.0 9.9E-41 2.2E-45 364.2 23.0 204 992-1208 2-217 (222)
366 cd03226 ABC_cobalt_CbiO_domain 100.0 6.4E-41 1.4E-45 360.9 21.2 201 356-570 1-205 (205)
367 PRK10895 lipopolysaccharide AB 100.0 9.1E-41 2E-45 369.3 23.0 218 991-1218 3-227 (241)
368 PRK14259 phosphate ABC transpo 100.0 2.1E-40 4.5E-45 371.1 26.1 219 353-581 12-254 (269)
369 cd03298 ABC_ThiQ_thiamine_tran 100.0 1E-40 2.2E-45 361.2 22.9 201 992-1210 1-211 (211)
370 TIGR03411 urea_trans_UrtD urea 100.0 1.7E-40 3.7E-45 367.5 24.9 221 355-580 3-231 (242)
371 PRK11308 dppF dipeptide transp 100.0 1.3E-40 2.9E-45 380.3 24.8 230 354-590 5-254 (327)
372 PRK15112 antimicrobial peptide 100.0 1.2E-40 2.7E-45 372.8 24.0 227 991-1228 4-252 (267)
373 PRK13649 cbiO cobalt transport 100.0 2.2E-40 4.7E-45 374.1 26.1 219 355-580 3-234 (280)
374 PRK13652 cbiO cobalt transport 100.0 2.3E-40 5E-45 372.5 26.1 217 355-580 4-227 (277)
375 COG1118 CysA ABC-type sulfate/ 100.0 4.2E-41 9E-46 355.4 18.7 213 991-1219 2-229 (345)
376 PRK09473 oppD oligopeptide tra 100.0 6.8E-41 1.5E-45 383.2 22.0 226 991-1224 12-259 (330)
377 PRK13645 cbiO cobalt transport 100.0 1.5E-40 3.2E-45 376.7 24.6 222 352-580 4-240 (289)
378 PRK14275 phosphate ABC transpo 100.0 1.2E-40 2.6E-45 375.9 23.6 218 991-1218 39-271 (286)
379 PRK14263 phosphate ABC transpo 100.0 1.4E-40 3E-45 370.5 23.8 219 991-1219 8-247 (261)
380 TIGR03522 GldA_ABC_ATP gliding 100.0 1.6E-40 3.5E-45 377.6 24.7 212 992-1218 3-222 (301)
381 TIGR02211 LolD_lipo_ex lipopro 100.0 1.2E-40 2.5E-45 363.8 22.6 209 355-570 2-220 (221)
382 PRK13632 cbiO cobalt transport 100.0 1.7E-40 3.6E-45 372.7 24.4 219 354-580 7-231 (271)
383 PRK13641 cbiO cobalt transport 100.0 1.9E-40 4E-45 374.9 24.9 220 354-580 2-234 (287)
384 PRK10895 lipopolysaccharide AB 100.0 1.6E-40 3.4E-45 367.4 23.7 217 354-580 3-226 (241)
385 PRK10619 histidine/lysine/argi 100.0 1.7E-40 3.7E-45 370.4 24.2 219 353-581 4-242 (257)
386 PRK11022 dppD dipeptide transp 100.0 1.4E-40 3E-45 380.5 24.0 229 355-590 4-253 (326)
387 PRK14272 phosphate ABC transpo 100.0 1.7E-40 3.8E-45 369.8 24.1 219 991-1219 4-238 (252)
388 PRK14240 phosphate transporter 100.0 2.5E-40 5.5E-45 367.8 25.2 221 353-581 2-235 (250)
389 PRK14274 phosphate ABC transpo 100.0 2.6E-40 5.6E-45 369.4 25.2 220 354-581 12-244 (259)
390 cd03257 ABC_NikE_OppD_transpor 100.0 2.2E-40 4.7E-45 363.7 24.1 212 992-1210 2-228 (228)
391 PRK14258 phosphate ABC transpo 100.0 1.5E-40 3.3E-45 371.2 23.1 219 990-1218 6-246 (261)
392 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-40 2.4E-45 366.1 21.7 214 355-578 1-219 (230)
393 cd03293 ABC_NrtD_SsuB_transpor 100.0 9.4E-41 2E-45 363.8 20.9 209 355-575 1-218 (220)
394 cd03299 ABC_ModC_like Archeal 100.0 1.6E-40 3.5E-45 365.1 22.9 210 992-1218 1-220 (235)
395 PRK13640 cbiO cobalt transport 100.0 2.7E-40 5.8E-45 372.6 25.1 220 353-580 4-232 (282)
396 TIGR03415 ABC_choXWV_ATP choli 100.0 1.1E-40 2.5E-45 383.9 22.5 207 1007-1224 37-262 (382)
397 PRK13536 nodulation factor exp 100.0 2E-40 4.3E-45 380.0 24.3 213 991-1218 41-262 (340)
398 PRK14251 phosphate ABC transpo 100.0 2.7E-40 5.9E-45 367.8 24.8 218 354-581 4-236 (251)
399 PRK14248 phosphate ABC transpo 100.0 4.2E-40 9.1E-45 369.3 26.5 220 354-581 21-253 (268)
400 PRK00349 uvrA excinuclease ABC 100.0 6.6E-40 1.4E-44 412.0 31.2 221 991-1221 614-931 (943)
401 TIGR01288 nodI ATP-binding ABC 100.0 1.7E-40 3.6E-45 378.2 23.5 216 354-580 4-224 (303)
402 cd03269 ABC_putative_ATPase Th 100.0 1E-40 2.2E-45 360.9 20.7 201 992-1210 1-210 (210)
403 PRK13648 cbiO cobalt transport 100.0 3E-40 6.4E-45 370.5 25.2 219 354-580 7-231 (269)
404 PRK09473 oppD oligopeptide tra 100.0 1.8E-40 3.9E-45 379.8 23.6 231 354-590 12-261 (330)
405 cd03262 ABC_HisP_GlnQ_permease 100.0 9.9E-41 2.2E-45 362.2 20.4 201 992-1206 1-213 (213)
406 PRK14236 phosphate transporter 100.0 2.8E-40 6.1E-45 371.0 24.7 222 352-581 23-257 (272)
407 cd03268 ABC_BcrA_bacitracin_re 100.0 1.3E-40 2.9E-45 359.5 21.3 203 355-573 1-208 (208)
408 cd03247 ABCC_cytochrome_bd The 100.0 1.8E-40 3.9E-45 348.7 21.6 178 355-573 1-178 (178)
409 PRK14246 phosphate ABC transpo 100.0 1.5E-40 3.3E-45 369.4 22.2 225 991-1225 10-250 (257)
410 PRK14255 phosphate ABC transpo 100.0 1.8E-40 3.8E-45 369.6 22.7 218 991-1218 5-237 (252)
411 PRK13547 hmuV hemin importer A 100.0 3.5E-40 7.6E-45 368.2 25.0 213 992-1218 2-245 (272)
412 COG0410 LivF ABC-type branched 100.0 3.7E-40 8E-45 338.0 23.0 220 354-581 3-227 (237)
413 PRK14249 phosphate ABC transpo 100.0 4.8E-40 1E-44 365.6 26.0 220 354-581 4-236 (251)
414 cd03301 ABC_MalK_N The N-termi 100.0 2.4E-40 5.2E-45 359.1 22.9 207 355-573 1-213 (213)
415 PRK14256 phosphate ABC transpo 100.0 3.3E-40 7.2E-45 367.2 24.6 223 353-585 3-241 (252)
416 PRK10247 putative ABC transpor 100.0 1.4E-40 2.9E-45 363.2 21.1 211 354-576 7-223 (225)
417 PRK14245 phosphate ABC transpo 100.0 3.8E-40 8.2E-45 366.2 24.9 220 354-581 3-235 (250)
418 PRK14238 phosphate transporter 100.0 3.8E-40 8.2E-45 369.5 25.1 221 354-581 24-256 (271)
419 PRK14265 phosphate ABC transpo 100.0 5.4E-40 1.2E-44 368.6 26.3 218 991-1218 20-259 (274)
420 PRK14239 phosphate transporter 100.0 3.2E-40 6.9E-45 367.7 24.3 220 354-581 5-237 (252)
421 PRK13536 nodulation factor exp 100.0 2.2E-40 4.8E-45 379.6 23.6 217 354-581 41-262 (340)
422 cd03257 ABC_NikE_OppD_transpor 100.0 2.3E-40 4.9E-45 363.5 22.7 213 355-573 2-228 (228)
423 PRK11124 artP arginine transpo 100.0 2.5E-40 5.4E-45 366.0 23.2 216 355-580 3-230 (242)
424 PRK11300 livG leucine/isoleuci 100.0 3.5E-40 7.7E-45 368.0 24.6 222 354-580 5-243 (255)
425 PRK13633 cobalt transporter AT 100.0 3.4E-40 7.4E-45 371.7 24.6 221 354-581 4-234 (280)
426 PRK14243 phosphate transporter 100.0 5E-40 1.1E-44 367.3 25.7 218 354-581 10-249 (264)
427 PRK14261 phosphate ABC transpo 100.0 4E-40 8.7E-45 366.7 24.8 227 354-588 6-245 (253)
428 PRK14264 phosphate ABC transpo 100.0 3.9E-40 8.5E-45 374.9 25.2 219 990-1218 44-290 (305)
429 cd03225 ABC_cobalt_CbiO_domain 100.0 1.7E-40 3.6E-45 359.7 20.9 205 356-568 1-211 (211)
430 PRK15093 antimicrobial peptide 100.0 2.8E-40 6.1E-45 379.5 24.0 225 992-1224 4-256 (330)
431 PRK10575 iron-hydroxamate tran 100.0 2.7E-40 5.9E-45 369.9 23.2 222 354-580 11-237 (265)
432 PRK14244 phosphate ABC transpo 100.0 1.8E-40 3.9E-45 369.1 21.5 218 355-582 6-239 (251)
433 PRK13548 hmuV hemin importer A 100.0 5E-40 1.1E-44 366.0 25.1 216 355-580 3-230 (258)
434 PRK14237 phosphate transporter 100.0 7.1E-40 1.5E-44 366.8 26.4 222 352-581 18-252 (267)
435 TIGR03522 GldA_ABC_ATP gliding 100.0 3.7E-40 7.9E-45 374.7 24.4 215 355-580 3-221 (301)
436 PRK11231 fecE iron-dicitrate t 100.0 3E-40 6.4E-45 368.0 23.1 221 355-580 3-227 (255)
437 PRK11247 ssuB aliphatic sulfon 100.0 3.5E-40 7.6E-45 365.0 23.5 205 353-576 11-219 (257)
438 PRK13638 cbiO cobalt transport 100.0 4E-40 8.6E-45 369.9 24.2 216 355-580 2-225 (271)
439 PRK11144 modC molybdate transp 100.0 2.9E-40 6.2E-45 382.4 23.7 211 992-1219 2-220 (352)
440 TIGR01978 sufC FeS assembly AT 100.0 2.4E-40 5.1E-45 367.0 22.0 213 992-1217 1-234 (243)
441 TIGR01277 thiQ thiamine ABC tr 100.0 3.8E-40 8.2E-45 357.0 23.1 202 992-1211 1-212 (213)
442 PRK14271 phosphate ABC transpo 100.0 9.6E-40 2.1E-44 366.6 26.9 220 354-581 21-252 (276)
443 PRK11701 phnK phosphonate C-P 100.0 4.1E-40 8.8E-45 367.6 23.6 224 991-1224 6-249 (258)
444 cd03292 ABC_FtsE_transporter F 100.0 2.9E-40 6.3E-45 358.8 21.6 206 355-569 1-214 (214)
445 PRK10253 iron-enterobactin tra 100.0 5.2E-40 1.1E-44 367.7 24.2 219 353-580 6-233 (265)
446 PRK14253 phosphate ABC transpo 100.0 7.6E-40 1.7E-44 363.8 24.9 220 354-581 3-234 (249)
447 PRK13639 cbiO cobalt transport 100.0 5.7E-40 1.2E-44 368.8 24.0 217 355-580 2-226 (275)
448 TIGR01188 drrA daunorubicin re 100.0 2.7E-40 5.9E-45 376.3 21.5 200 1007-1218 6-214 (302)
449 PRK15093 antimicrobial peptide 100.0 6.5E-40 1.4E-44 376.5 24.8 230 354-590 3-258 (330)
450 TIGR03873 F420-0_ABC_ATP propo 100.0 5.4E-40 1.2E-44 366.1 23.3 221 355-580 2-226 (256)
451 PRK11701 phnK phosphonate C-P 100.0 7.6E-40 1.6E-44 365.4 24.5 225 354-588 6-249 (258)
452 TIGR02673 FtsE cell division A 100.0 3.8E-40 8.2E-45 357.8 21.4 205 355-568 2-214 (214)
453 PRK09984 phosphonate/organopho 100.0 7.1E-40 1.5E-44 366.5 24.3 211 991-1215 4-240 (262)
454 PRK10908 cell division protein 100.0 1E-39 2.2E-44 356.3 24.8 208 355-571 2-217 (222)
455 cd03234 ABCG_White The White s 100.0 2.6E-40 5.7E-45 361.7 20.2 214 992-1210 4-226 (226)
456 PRK14262 phosphate ABC transpo 100.0 8.4E-40 1.8E-44 363.7 24.5 220 354-581 3-235 (250)
457 PRK14270 phosphate ABC transpo 100.0 1E-39 2.3E-44 362.9 25.2 220 354-581 4-236 (251)
458 PRK14272 phosphate ABC transpo 100.0 9.2E-40 2E-44 364.0 24.6 225 354-586 4-242 (252)
459 cd03269 ABC_putative_ATPase Th 100.0 2.7E-40 5.9E-45 357.6 19.8 205 355-573 1-210 (210)
460 cd03246 ABCC_Protease_Secretio 100.0 5.3E-40 1.2E-44 343.2 21.3 172 355-569 1-173 (173)
461 COG1123 ATPase components of v 100.0 5.9E-40 1.3E-44 380.4 23.7 235 353-591 279-530 (539)
462 PRK14260 phosphate ABC transpo 100.0 7E-40 1.5E-44 365.6 23.5 219 353-581 6-244 (259)
463 PRK13547 hmuV hemin importer A 100.0 7.8E-40 1.7E-44 365.4 23.8 221 355-580 2-244 (272)
464 PRK10584 putative ABC transpor 100.0 8.6E-40 1.9E-44 358.5 23.7 212 354-572 6-227 (228)
465 PRK10419 nikE nickel transport 100.0 6E-40 1.3E-44 367.3 22.8 226 992-1224 4-248 (268)
466 cd03290 ABCC_SUR1_N The SUR do 100.0 1.1E-39 2.3E-44 354.9 23.9 210 356-568 2-218 (218)
467 PRK10418 nikD nickel transport 100.0 7.8E-40 1.7E-44 364.2 23.3 224 991-1228 4-243 (254)
468 cd03235 ABC_Metallic_Cations A 100.0 2.9E-40 6.3E-45 358.3 19.3 202 356-573 1-213 (213)
469 cd03262 ABC_HisP_GlnQ_permease 100.0 7.1E-40 1.5E-44 355.5 22.3 205 355-569 1-213 (213)
470 COG0410 LivF ABC-type branched 100.0 1.1E-39 2.3E-44 334.6 21.9 222 991-1220 3-229 (237)
471 PRK14275 phosphate ABC transpo 100.0 1.4E-39 2.9E-44 367.3 24.9 221 353-581 38-271 (286)
472 PRK14266 phosphate ABC transpo 100.0 1.3E-39 2.7E-44 362.3 24.3 221 354-584 3-238 (250)
473 TIGR00968 3a0106s01 sulfate AB 100.0 1.2E-39 2.6E-44 358.8 23.5 215 355-581 1-221 (237)
474 COG1131 CcmA ABC-type multidru 100.0 7.5E-40 1.6E-44 367.9 22.1 218 354-581 4-227 (293)
475 COG1137 YhbG ABC-type (unclass 100.0 1E-40 2.2E-45 330.2 13.1 223 353-581 3-229 (243)
476 PRK14252 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 363.9 24.6 220 352-581 14-250 (265)
477 PRK14241 phosphate transporter 100.0 1.6E-39 3.4E-44 362.8 24.2 220 354-581 4-243 (258)
478 PRK14254 phosphate ABC transpo 100.0 2.1E-39 4.6E-44 365.2 25.4 220 353-581 38-270 (285)
479 PRK11144 modC molybdate transp 100.0 1.3E-39 2.8E-44 377.0 24.1 211 355-582 2-220 (352)
480 COG1131 CcmA ABC-type multidru 100.0 1.3E-39 2.8E-44 366.0 23.2 214 991-1218 4-227 (293)
481 TIGR02142 modC_ABC molybdenum 100.0 1.1E-39 2.4E-44 378.3 23.3 208 996-1219 4-223 (354)
482 cd03234 ABCG_White The White s 100.0 8.8E-40 1.9E-44 357.5 21.3 214 355-573 4-226 (226)
483 TIGR02982 heterocyst_DevA ABC 100.0 1.2E-39 2.6E-44 355.0 22.1 204 992-1206 2-219 (220)
484 COG0411 LivG ABC-type branched 100.0 5.2E-40 1.1E-44 339.5 18.1 220 355-581 5-240 (250)
485 PRK11248 tauB taurine transpor 100.0 1.2E-39 2.6E-44 361.8 22.1 202 992-1212 2-215 (255)
486 PRK09984 phosphonate/organopho 100.0 2.8E-39 6.1E-44 361.7 25.3 220 354-578 4-240 (262)
487 TIGR01188 drrA daunorubicin re 100.0 1E-39 2.2E-44 371.7 22.0 204 370-581 6-214 (302)
488 PRK14258 phosphate ABC transpo 100.0 1.9E-39 4.2E-44 362.3 23.9 221 353-581 6-246 (261)
489 PRK14263 phosphate ABC transpo 100.0 2.2E-39 4.7E-44 361.0 24.2 218 354-581 8-246 (261)
490 PRK14265 phosphate ABC transpo 100.0 4.5E-39 9.8E-44 361.0 26.9 219 353-581 19-259 (274)
491 COG4555 NatA ABC-type Na+ tran 100.0 6.8E-40 1.5E-44 324.8 17.3 213 992-1218 2-223 (245)
492 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.6E-39 5.5E-44 350.3 23.6 206 355-573 1-211 (211)
493 cd03300 ABC_PotA_N PotA is an 100.0 2.2E-39 4.9E-44 355.6 23.4 215 355-581 1-221 (232)
494 PRK15112 antimicrobial peptide 100.0 4.1E-39 8.9E-44 360.6 26.0 231 354-591 4-251 (267)
495 TIGR01978 sufC FeS assembly AT 100.0 1.7E-39 3.6E-44 360.2 22.4 215 355-579 1-233 (243)
496 PRK14246 phosphate ABC transpo 100.0 4.6E-39 9.9E-44 357.5 25.8 227 353-589 9-250 (257)
497 PRK10771 thiQ thiamine transpo 100.0 3.9E-39 8.5E-44 353.9 24.8 214 355-581 2-220 (232)
498 PRK14255 phosphate ABC transpo 100.0 2.4E-39 5.2E-44 360.5 23.4 220 354-581 5-237 (252)
499 TIGR02142 modC_ABC molybdenum 100.0 2.4E-39 5.1E-44 375.5 23.9 213 359-583 4-224 (354)
500 COG4598 HisP ABC-type histidin 100.0 7.9E-40 1.7E-44 316.8 16.3 222 353-584 5-245 (256)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.2e-217 Score=1966.43 Aligned_cols=1206 Identities=48% Similarity=0.790 Sum_probs=1112.4
Q ss_pred cchHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHH
Q 000909 7 KNNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAV 86 (1230)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 86 (1230)
..++.++|+|..+.++.+++++++++++.++.+|++.+++++++|.+..... . ...+.+..+++++++++++.
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~------~-~~~~~~~~~~l~~~~lg~~~ 84 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTN------K-IASSEVSKVALYFVYLGVGV 84 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccc------h-hhHHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999999998864311 1 11245677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHH
Q 000909 87 MVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFIS 166 (1230)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~ 166 (1230)
++..|++..||.+.++|+..++|+++++.+++++++|||. +.+| ++.+++++|++.|++.+++.+..+++.+.++++
T Consensus 85 ~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~-~~~g--~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~ 161 (1228)
T KOG0055|consen 85 FISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDT-NSTG--ELVTRLSDDIELIQDAIGEKVGNFIQLLATFIA 161 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeec-cccc--ceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 5557 999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHH
Q 000909 167 GLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILD 246 (1230)
Q Consensus 167 ~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~ 246 (1230)
++++.|+..|+|+++++.+.|++.+....+.+.+.+...+.++++++..++++|+++++|||.+|+.|+++.+||.+.++
T Consensus 162 g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~ 241 (1228)
T KOG0055|consen 162 GFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALE 241 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 247 STTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAA 325 (1230)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~ 325 (1230)
...+..++...+.++..++. ++.+..+++.+|||+.++..+..+.|++++++.+++.....+++..+.+..+..+.+++
T Consensus 242 ~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa 321 (1228)
T KOG0055|consen 242 NALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAA 321 (1228)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccch
Confidence 99999999999999999888 88889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhc
Q 000909 326 SRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQR 405 (1230)
Q Consensus 326 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 405 (1230)
.+|++.++..|+.+.....+......+|+|+|+||+|+||.+++.++|+|+||+|++||++||||||||||||++++|.|
T Consensus 322 ~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~R 401 (1228)
T KOG0055|consen 322 YRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLAR 401 (1228)
T ss_pred HHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHH
Confidence 99999999988876554233344567899999999999999998899999999999999999999999999999999999
Q ss_pred CCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccc
Q 000909 406 FYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYET 485 (1230)
Q Consensus 406 ~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 485 (1230)
+|+|++|+|++||.|+++++.+|+|++||+|+|||.||++||+|||.||+|+++.+++.++|+.+++++||.++|+||+|
T Consensus 402 fydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T 481 (1228)
T KOG0055|consen 402 FYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDT 481 (1228)
T ss_pred hcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEe
Q 000909 486 KVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVD 565 (1230)
Q Consensus 486 ~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~ 565 (1230)
.+||+|.+|||||||||||||||++||+||||||||||||+++|+.++++|++..+|+|+|+|||||+++++||+|+||+
T Consensus 482 ~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~ 561 (1228)
T KOG0055|consen 482 LVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVME 561 (1228)
T ss_pred cccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccc---cccccCCC--CccccCCCCcccCC---CCCCC
Q 000909 566 NGCLVEIGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVS---SVTRSSGG--RLSAARSSPAIFAS---PLPVI 637 (1230)
Q Consensus 566 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~---~~~~~ 637 (1230)
+|+|+|.|+|+||++. .|.|.++++.|.....++.++.++.... ...+.+.. ...+.. ....... +.+..
T Consensus 562 ~G~IvE~G~h~ELi~~-~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~-~~~~~~~~~~~~e~~ 639 (1228)
T KOG0055|consen 562 EGKIVEQGTHDELIAL-GGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGS-NRSNLLSVKPEGEDP 639 (1228)
T ss_pred CCEEEEecCHHHHHhc-cchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCc-ccccccccccccccc
Confidence 9999999999999997 5999999999876553221100000000 00000000 000000 0000000 00000
Q ss_pred CCCCCCCCCchHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHH
Q 000909 638 DSPQPVTYLPPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLI 717 (1230)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1230)
+........+.++++++++++|+|+.+++|.+++.+.|..+|.+++.++.++..+...+++.+......|.++|++++++
T Consensus 640 ~~~~~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~ 719 (1228)
T KOG0055|consen 640 EEPVSEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIV 719 (1228)
T ss_pred ccccccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHH
Confidence 00001122566799999999999999999999999999999999999999999998776666666666699999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 718 SLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAI 797 (1230)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~ 797 (1230)
..+++++++|+|..++++++.|+|.++|+++++++++|||+++|+ |.|.+|+.+|...++..++..+..+++++.+++.
T Consensus 720 ~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~ 798 (1228)
T KOG0055|consen 720 SGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVII 798 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHH
Q 000909 798 AMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQE 877 (1230)
Q Consensus 798 ~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~ 877 (1230)
+++++|+++|+++++++++.|++++..+.+.+++.....+.++...++...+.|++++++||++|+.|+++.+.|.+.++
T Consensus 799 ~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~ 878 (1228)
T KOG0055|consen 799 GIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELE 878 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 878 EPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAV 957 (1230)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 957 (1230)
.+.+...+++++.++.+++++.+.++.+++.+|+|++++.+|.+++.+++.+++.+.+....+++...+.+++.++..|+
T Consensus 879 ~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa 958 (1228)
T KOG0055|consen 879 KPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAA 958 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHH
Q 000909 958 ASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVI 1037 (1230)
Q Consensus 958 ~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~ 1037 (1230)
.++++++|++|..+... +.+...++.+|+|+|+||+|+||+||+.+||+|+||+|++||+|||||||||||||++
T Consensus 959 ~~iF~i~dr~~~i~~~~-----~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI 1033 (1228)
T KOG0055|consen 959 GSIFEILDRKPTIDPDS-----TSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVI 1033 (1228)
T ss_pred HHHHHHhcCCCCCCCCC-----CCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHH
Confidence 99999999998765431 1223345678999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhcc
Q 000909 1038 GLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLK 1117 (1230)
Q Consensus 1038 ~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp 1117 (1230)
.||.|||||++|.|.|||+||+++++++||++|++|+|||.||++||||||.||..+++++|+.+|++.|++|+||.+||
T Consensus 1034 ~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP 1113 (1228)
T KOG0055|consen 1034 SLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLP 1113 (1228)
T ss_pred HHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999965689999999999999999999999
Q ss_pred ccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCE
Q 000909 1118 DGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDS 1197 (1230)
Q Consensus 1118 ~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~ 1197 (1230)
+||||.|||+|.+||||||||||||||++|||+||||||||||||.++|+.||++|++...|||+|+|||||+||++||.
T Consensus 1114 ~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~ 1193 (1228)
T KOG0055|consen 1114 QGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADV 1193 (1228)
T ss_pred CcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCcEEEEecCHhHHhhcccccHHHhhhcC
Q 000909 1198 IALVADGRVVERGTYAQLTHMRGAFFNLATLQS 1230 (1230)
Q Consensus 1198 I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~ 1230 (1230)
|+|+++|+|+|+|||+||++++|.|++|++.|+
T Consensus 1194 I~Vi~~G~VvE~GtH~~L~~~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1194 IAVLKNGKVVEQGTHDELLAKRGIYFRLVQLQS 1226 (1228)
T ss_pred EEEEECCEEEecccHHHHHhCCCchHHHhhhcc
Confidence 999999999999999999999999999999884
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.7e-174 Score=1720.10 Aligned_cols=1203 Identities=28% Similarity=0.472 Sum_probs=1019.3
Q ss_pred ccchHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHH
Q 000909 6 NKNNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLA 85 (1230)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 85 (1230)
++.++..+|+|..+.++.+++++++++++.++..|+++++++.++|.+... ..+..+++++++++++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~-------------~~~~~~~~~~~~~~i~ 109 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG-------------ENVNDIIFSLVLIGIF 109 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------chHHHHHHHHHHHHHH
Confidence 445789999999988888889999999999999999999999999976321 1122334556667778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHH
Q 000909 86 VMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFI 165 (1230)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i 165 (1230)
.+++.+++.+++.+.++++..++|.++|++++++|++|||+ .++| ++.+++++|++.+++.+...+..++..+++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~-~~~~--~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i 186 (1466)
T PTZ00265 110 QFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDN-NPGS--KLTSDLDFYLEQVNAGIGTKFITIFTYASAFL 186 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcC-CCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999997 4545 99999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHH
Q 000909 166 SGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAIL 245 (1230)
Q Consensus 166 ~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~ 245 (1230)
++++++++++|+|++++++++|+++++..++.+++++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..
T Consensus 187 ~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~ 266 (1466)
T PTZ00265 187 GLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSE 266 (1466)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhc--------CccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 246 DSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFK--------GETGGKIYAAGISFILSGLSLGSALPELK 316 (1230)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~--------~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 316 (1230)
+...+...+.....++..++. ++.++.+++++|+|++++..| .+++|.+++++.+.+.....+..+.+.+.
T Consensus 267 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~ 346 (1466)
T PTZ00265 267 KLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNIT 346 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888888888777666 666777889999999999875 57889998887777766667777888899
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcH
Q 000909 317 YFTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGK 396 (1230)
Q Consensus 317 ~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGK 396 (1230)
.++.+..+++|++++++.+++.+... .+...+. .+.|+++||+|+|+++++.++|+|+||+|++||++||||||||||
T Consensus 347 ~~~~a~~a~~ri~~ii~~~~~~~~~~-~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGK 424 (1466)
T PTZ00265 347 EYMKSLEATNSLYEIINRKPLVENND-DGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGK 424 (1466)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCC-CCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCH
Confidence 99999999999999999877644211 1111122 247999999999986544579999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEE-CCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCC-------------------
Q 000909 397 STAIALVQRFYDADDGIVRI-DGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKL------------------- 456 (1230)
Q Consensus 397 STl~~ll~~~~~~~~G~i~~-~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~------------------- 456 (1230)
|||+++|+|+|+|++|+|++ ||.++++++.+++|++||||+|+|.||++||+|||.+|.+
T Consensus 425 STLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~ 504 (1466)
T PTZ00265 425 STILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDS 504 (1466)
T ss_pred HHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccc
Confidence 99999999999999999999 5799999999999999999999999999999999999742
Q ss_pred --------------------------------------CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhH
Q 000909 457 --------------------------------------DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQ 498 (1230)
Q Consensus 457 --------------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 498 (1230)
+.++++++++|+.+++++++.++|+|++|.+|++|.+|||||
T Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQ 584 (1466)
T PTZ00265 505 QENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQ 584 (1466)
T ss_pred cccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHH
Confidence 235678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCC---------
Q 000909 499 KQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNG--------- 567 (1230)
Q Consensus 499 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G--------- 567 (1230)
||||+||||++++|+|||||||||+||+++++.+++.|++.. +|+|+|+||||+++++.||+|++|++|
T Consensus 585 kQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~ 664 (1466)
T PTZ00265 585 KQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVD 664 (1466)
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccc
Confidence 999999999999999999999999999999999999999875 489999999999999999999999986
Q ss_pred --------------------------------------eEEEecChhHHHhhcCcHHHHHHHHhhcccCCCC-C--CCcc
Q 000909 568 --------------------------------------CLVEIGTHNDLINRIDGHYAKMAKLQRQFSCDDQ-E--TIPE 606 (1230)
Q Consensus 568 --------------------------------------~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~ 606 (1230)
+|+|+|+|+||++..+|.|+.+...|........ + ....
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~ 744 (1466)
T PTZ00265 665 IIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDS 744 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccc
Confidence 5999999999998458999999987754321110 0 0000
Q ss_pred ---ccc-c-cc-cc---cCCCCc-cccCCCCcccCCCC--CC-CCC-CC-C----------CCCCchHHHHHHhhhhhhh
Q 000909 607 ---THV-S-SV-TR---SSGGRL-SAARSSPAIFASPL--PV-IDS-PQ-P----------VTYLPPSFFRLLSLNAPEW 661 (1230)
Q Consensus 607 ---~~~-~-~~-~~---~~~~~~-~~~~~~~~~~~~~~--~~-~~~-~~-~----------~~~~~~~~~~~~~~~~~~~ 661 (1230)
... . .. .. ...... .............. +. .+. .. + ....+..+.++++..++++
T Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (1466)
T PTZ00265 745 DMKSSAYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYK 824 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHH
Confidence 000 0 00 00 000000 00000000000000 00 000 00 0 0111223455566666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 662 KQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIR 741 (1230)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (1230)
+.++++++++++.+.+.|.++++++.+++.++.. .........|.+++++++++..++.+++.|++.++++++..++|
T Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR 902 (1466)
T PTZ00265 825 KDVTIIALSILVAGGLYPVFALLYAKYVSTLFDF--ANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMK 902 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888889999999999999999999876532 22233455678888888888999999999999999999999999
Q ss_pred HHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 742 LRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTI 821 (1230)
Q Consensus 742 ~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~ 821 (1230)
.++|++++++|++|||++++++|++++|+++|++.++..+...+..++..++.++++++++++++|.+++++++++|++.
T Consensus 903 ~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~ 982 (1466)
T PTZ00265 903 RRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFM 982 (1466)
T ss_pred HHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997779999999999999999999999999999999999999999999999999888766555544
Q ss_pred HHHHHHHHHHhHHHHH---------------HHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHH
Q 000909 822 LCFYTRKVLLSSVSTN---------------FVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKK 886 (1230)
Q Consensus 822 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~ 886 (1230)
..+..+.+.......+ ..+..++....+.|++.|+++||+|+.|+++.++|++..+...+...+.
T Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~ 1062 (1466)
T PTZ00265 983 RVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRK 1062 (1466)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 4333322221111100 1223455678899999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000909 887 SWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDR 966 (1230)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~ 966 (1230)
.+..+...++.+++.++..++++|+|++++..|.+++|.+++++.++.+...++..+...++++.++..+++|++++++.
T Consensus 1063 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~ 1142 (1466)
T PTZ00265 1063 TLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIR 1142 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 88999999999999999999999999999999999999999988777776677888999999999999999999999988
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC
Q 000909 967 QSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV 1046 (1230)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p 1046 (1230)
+++.+..... +.....++...|.|+|+||+|+||++++.+||+|+||+|+|||+|||||+||||||||+++|+|||+|
T Consensus 1143 ~~~~~~~~~~--~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp 1220 (1466)
T PTZ00265 1143 KSNIDVRDNG--GIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDL 1220 (1466)
T ss_pred CCcCCCCCCc--ccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCC
Confidence 6644321100 00000112346889999999999977666899999999999999999999999999999999999999
Q ss_pred ------------------------------------------------------CCCeEEECCeecCCCChHHHhhcceE
Q 000909 1047 ------------------------------------------------------EQGSVRVDGMDVRELDVHWYRKHTAL 1072 (1230)
Q Consensus 1047 ------------------------------------------------------~~G~I~idG~di~~i~~~~lR~~i~~ 1072 (1230)
++|+|+|||+||+++++++||++|+|
T Consensus 1221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~ 1300 (1466)
T PTZ00265 1221 KNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSI 1300 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccE
Confidence 69999999999999999999999999
Q ss_pred EcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000909 1073 VSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTIL 1152 (1230)
Q Consensus 1073 VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~IL 1152 (1230)
|||||+||+|||||||.||+|+++++++++|++.|++++||.+||+||||.|||+|.+|||||||||||||||+|+|+||
T Consensus 1301 V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~IL 1380 (1466)
T PTZ00265 1301 VSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKIL 1380 (1466)
T ss_pred eCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeC----cEEE-EecCHhHHhh-cccccHH
Q 000909 1153 LLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKKLDSIALVAD----GRVV-ERGTYAQLTH-MRGAFFN 1224 (1230)
Q Consensus 1153 lLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~----G~Iv-e~Gt~~eLl~-~~g~y~~ 1224 (1230)
|||||||+||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |+++ |.|+|+||++ ++|.|++
T Consensus 1381 LLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~ 1460 (1466)
T PTZ00265 1381 LLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKK 1460 (1466)
T ss_pred EEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHH
Confidence 9999999999999999999999874 69999999999999999999999999 9954 9999999998 5999999
Q ss_pred HhhhcC
Q 000909 1225 LATLQS 1230 (1230)
Q Consensus 1225 l~~~q~ 1230 (1230)
||+.|+
T Consensus 1461 l~~~~~ 1466 (1466)
T PTZ00265 1461 YVKLAK 1466 (1466)
T ss_pred HHhhcC
Confidence 999885
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-169 Score=1585.47 Aligned_cols=1093 Identities=23% Similarity=0.289 Sum_probs=857.9
Q ss_pred HHHHHHHHHHHHHHH----HHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 000909 98 SKTSERQVVKIRYKY----LEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTY 173 (1230)
Q Consensus 98 ~~~~~~~~~~lr~~~----~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 173 (1230)
.+...+.+.++|..+ |+|.++++...-.+ .+.| +++|.+++|++++.++... +..+....+.+++++.+++.
T Consensus 263 ~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~-~t~G--~ivNlms~D~~ri~~~~~~-~h~~w~~Plqi~~~l~lLy~ 338 (1381)
T KOG0054|consen 263 FFVSFRVGMRLRSALISAIYRKALRLSNSARGE-TTVG--EIVNLMSVDAQRLSDAACF-LHLLWSAPLQIILALYLLYG 338 (1381)
T ss_pred HHHHHhhhhhHHHHHHHHHHHhhhcCchhhccC-CCcc--hhhhhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 445666677777665 66666666554332 3455 9999999999999998653 34444444555555544444
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000909 174 FSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGI 253 (1230)
Q Consensus 174 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 253 (1230)
.--.-+++.++++.+++++..+++++.++.+++.++..+++...++|.++|||+||+|+||+.|.++.++.++++.+...
T Consensus 339 ~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lr 418 (1381)
T KOG0054|consen 339 LLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLR 418 (1381)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHH
Confidence 33334667777777888889999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000909 254 KQGTAKGLAVGSTGLSFAIWAFLAWYGSHL-VMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRI 332 (1230)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 332 (1230)
|.....++.......... .+.+..++.+. ...+.+++..+|+.+.++..+..|+..++..+..+.++.+|.+|+.+++
T Consensus 419 k~~~~~~~~~~~~~~~p~-lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl 497 (1381)
T KOG0054|consen 419 KSAYLSALNSFLNFFSPV-LVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFL 497 (1381)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888766554422211 22223344444 4456678889999999999999999998889999999999999999999
Q ss_pred ccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000909 333 DRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDG 412 (1230)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 412 (1230)
..++. +.........++.+..|+++|.+|+|++....+.|+||||+|++|+.+||||+.|||||+|+.+|+|+++..+|
T Consensus 498 ~~~e~-~~~~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG 576 (1381)
T KOG0054|consen 498 LSEEL-DPDSVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSG 576 (1381)
T ss_pred cCccc-CccccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccc
Confidence 76432 22111111223344579999999999864445699999999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCC
Q 000909 413 IVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGA 492 (1230)
Q Consensus 413 ~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 492 (1230)
++.++| .++||||+||+|++||||||.||.| .+.++..++.+.|.+.++++.||.|+.|.+||+|.
T Consensus 577 ~v~v~g-------------siaYv~Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGi 642 (1381)
T KOG0054|consen 577 SVAVNG-------------SVAYVPQQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGERGI 642 (1381)
T ss_pred eEEEcC-------------eEEEeccccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCcc
Confidence 999998 5999999999999999999999986 44566677777788889999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHH-HHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEE
Q 000909 493 LLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESET-LVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVE 571 (1230)
Q Consensus 493 ~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~-~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 571 (1230)
+|||||||||+||||+|+|+||++||||+||+|+++.+ .+.++++...++||+|+|||.++.+++||+|++|+||+|++
T Consensus 643 nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~ 722 (1381)
T KOG0054|consen 643 NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVE 722 (1381)
T ss_pred CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEec
Confidence 99999999999999999999999999999999999665 55777877788999999999999999999999999999999
Q ss_pred ecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCC---CCCCCCCch
Q 000909 572 IGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDS---PQPVTYLPP 648 (1230)
Q Consensus 572 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 648 (1230)
.|+++||++. ...+.++..........+.+...............+.........+.........+. .+.......
T Consensus 723 ~Gty~el~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v 801 (1381)
T KOG0054|consen 723 SGTYEELLKS-GGDFAELAHEEESEQEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKV 801 (1381)
T ss_pred ccCHHHHHhc-chhHHHHhhccchhhccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEe
Confidence 9999999974 777777633222211111000000000000000000000000000000000000000 001123334
Q ss_pred HHHHHHhhhhhhhHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHh--hhHHHHHHHHHHHHHHHHHHHHH
Q 000909 649 SFFRLLSLNAPEWKQGLI--GSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQ--SRIRTYSLIFCSLSLISLAFNLL 724 (1230)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 724 (1230)
.+..+..|.+..+..... .+++............++++.|.+ ....... .....|..+|.+++++..++..+
T Consensus 802 ~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~----~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~ 877 (1381)
T KOG0054|consen 802 SWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTD----DGEDNGTTTVSTSFYLGVYALLGVASSLLTLL 877 (1381)
T ss_pred eHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CcccccccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 455555554442222211 122222222222333333333332 1111111 34667899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 725 QHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLV 804 (1230)
Q Consensus 725 ~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~ 804 (1230)
+.+.+...+.+++++||++++++++++||+||| .||+|+|+|||++|++.+|..+|..+..++..++.+++.+++..+
T Consensus 878 rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFd--tTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~ 955 (1381)
T KOG0054|consen 878 RSFLFAKGGLKASRKLHDKLLNSILRAPMSFFD--TTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISY 955 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcC--CCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhH
Confidence 999999999999999999999999999999999 899999999999999999999999999999999999888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH----HHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHH
Q 000909 805 VAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNR----STQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPR 880 (1230)
Q Consensus 805 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~ 880 (1230)
..|+ ++++++|+.+++++++.+|.+. +++.++..+- ..+|+.|++.|+.|||||+.+++|.+++++..|.+.
T Consensus 956 ~~P~---fli~~~pl~v~~~~~~~~Y~~t-sReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~ 1031 (1381)
T KOG0054|consen 956 VTPW---FLIAIIPLGVIYYFVQRYYLAT-SRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENS 1031 (1381)
T ss_pred HhHH---HHHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhH
Confidence 6664 5667778888888877777765 7888887654 369999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 881 KQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASV 960 (1230)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri 960 (1230)
+..... .....|+++..-+...+..+...+.+.+...+..++|.++.++.+.+.....+..+++...++++.++|+||+
T Consensus 1032 ~~~f~~-~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv 1110 (1381)
T KOG0054|consen 1032 RAFFLS-ISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERV 1110 (1381)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHH
Confidence 765432 2222333332222111111111111222222227799999999999999999999999999999999999999
Q ss_pred HHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHH
Q 000909 961 FKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLI 1040 (1230)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL 1040 (1230)
.++.+.++|.|... ++..+++.||.+|+|+|+|++.+|.+. .++|||||||+|+||||||||||||||||||+++|
T Consensus 1111 ~eY~~~~~E~p~~~---~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aL 1186 (1381)
T KOG0054|consen 1111 LEYTDIPSEAPLEI---EESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILAL 1186 (1381)
T ss_pred HHHhcCCCCCCCCC---cCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHH
Confidence 99999887733221 122256789999999999999999643 35799999999999999999999999999999999
Q ss_pred hccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccc
Q 000909 1041 QRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGY 1120 (1230)
Q Consensus 1041 ~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gl 1120 (1230)
+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|+||++.+ +++|++||+||++|++.++|+++|+||
T Consensus 1187 FRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~-e~sD~~IW~ALe~~~Lk~~v~~~p~~L 1265 (1381)
T KOG0054|consen 1187 FRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFD-EYSDDEIWEALERCQLKDVVSSLPGGL 1265 (1381)
T ss_pred HHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCccc-ccCHHHHHHHHHHhChHHHHhhCCcCC
Confidence 9999999999999999999999999999999999999999999999998653 799999999999999999999999999
Q ss_pred cccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEE
Q 000909 1121 ETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIAL 1200 (1230)
Q Consensus 1121 dt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~v 1200 (1230)
|++|.|+|.|||.||||++||||||||++|||+||||||++|++||..||++|++.|++||||+||||++||.+||||+|
T Consensus 1266 d~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlV 1345 (1381)
T KOG0054|consen 1266 DSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLV 1345 (1381)
T ss_pred CceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCcEEEEecCHhHHhhc-ccccHHHhh
Q 000909 1201 VADGRVVERGTYAQLTHM-RGAFFNLAT 1227 (1230)
Q Consensus 1201 l~~G~Ive~Gt~~eLl~~-~g~y~~l~~ 1227 (1230)
||+|+|+|+|+|++|+++ ++.|++++.
T Consensus 1346 ld~G~v~EfdsP~~Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1346 LDAGRVVEFDSPAELLSDKDSLFSSLLK 1373 (1381)
T ss_pred eeCCeEeecCChHHHHhCCcchHHHHHH
Confidence 999999999999999988 556655654
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.6e-159 Score=1587.58 Aligned_cols=1090 Identities=21% Similarity=0.242 Sum_probs=832.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHH
Q 000909 98 SKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTYFSWR 177 (1230)
Q Consensus 98 ~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 177 (1230)
.+.+.++...++..+|+|+++++..++++ .++| +++|++++|++.+++++. .+..++..++.+++++++++..-..
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~-~~~G--~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~ 441 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKK-FTSG--KITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGV 441 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCC-CCHH--HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777788889999999999999875 4445 999999999999999874 4555555555555555544432222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 178 LSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGT 257 (1230)
Q Consensus 178 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 257 (1230)
.+++.++++++++++..++.+++++..++.++..+++.+.+.|.++|+++||+|+||+.+.+++++.++++.+...+...
T Consensus 442 ~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~ 521 (1622)
T PLN03130 442 ASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQL 521 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333333444555566778888999999999999999999999999999999999999999999999888877766665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 000909 258 AKGLAVGSTGLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPE 337 (1230)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 337 (1230)
...+...+... ....+.++++|++.+..|.+++|.+++++.++..+..|+..+...+..+.++.++++|+.++++.++.
T Consensus 522 ~~~~~~~~~~~-~~~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~ 600 (1622)
T PLN03130 522 LSAFNSFILNS-IPVLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEER 600 (1622)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 55543332211 11234456788888889999999999999998888999998888899999999999999999975433
Q ss_pred CCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC-ceEEE
Q 000909 338 IDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADD-GIVRI 416 (1230)
Q Consensus 338 ~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-G~i~~ 416 (1230)
.+... . ......+.|+++|++|+|++++++++|+|+||+|++||++|||||||||||||+++|+|+++|++ |+|.+
T Consensus 601 ~~~~~-~--~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l 677 (1622)
T PLN03130 601 VLLPN-P--PLEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI 677 (1622)
T ss_pred ccccC-C--cccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE
Confidence 21111 0 01112347999999999985444679999999999999999999999999999999999999999 99986
Q ss_pred CCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCCh
Q 000909 417 DGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSG 496 (1230)
Q Consensus 417 ~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 496 (1230)
|++|+||+|+||+|++||||||.||.+ .+++++.++++.|+++++++.||+|++|.+||+|.+|||
T Consensus 678 -------------~~~Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSG 743 (1622)
T PLN03130 678 -------------RGTVAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISG 743 (1622)
T ss_pred -------------cCeEEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCH
Confidence 448999999999999999999999986 468889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHH-HHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecCh
Q 000909 497 GQKQRIAIARAIIKNPVILLLDEATSALDSESETLV-QNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTH 575 (1230)
Q Consensus 497 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 575 (1230)
||||||+||||+|++|+|+||||||||||+++++.+ .++++...+++|+|+||||++.++.||+|++|++|+++++|+|
T Consensus 744 GQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~ 823 (1622)
T PLN03130 744 GQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTY 823 (1622)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCH
Confidence 999999999999999999999999999999998876 4567766689999999999999999999999999999999999
Q ss_pred hHHHhhcCcHHHHHHHHhhcccCCCCCCCccc-ccccccccCC---CCccccCCCCcccCCCCCCCCCCCCCCCCchHHH
Q 000909 576 NDLINRIDGHYAKMAKLQRQFSCDDQETIPET-HVSSVTRSSG---GRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFF 651 (1230)
Q Consensus 576 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (1230)
+|++++ ++.|.++...+....+...+...+. .......... .......................+........+.
T Consensus 824 ~eL~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 902 (1622)
T PLN03130 824 EELSNN-GPLFQKLMENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWK 902 (1622)
T ss_pred HHHHhc-chhHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccchhhhhHHHHhcCccCHH
Confidence 999984 7888888765432111110000000 0000000000 0000000000000000000000001112222344
Q ss_pred HHHhhhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 652 RLLSLNAPEW--KQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNF 729 (1230)
Q Consensus 652 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1230)
.+.+|.+... +...+.+++............++++.|.+... ........|.++|++++++..++.+++.+++
T Consensus 903 vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~-----~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~ 977 (1622)
T PLN03130 903 VLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGT-----PKTHGPLFYNLIYALLSFGQVLVTLLNSYWL 977 (1622)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433311 11112222222222222222333333332111 0112234577788888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 730 AYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKL 809 (1230)
Q Consensus 730 ~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 809 (1230)
.+.+.+++.++|.+++++++++|++||| ++++|+++|||++|++.++..++..+..++..++.+++.++++++++|..
T Consensus 978 ~~~~~~~~~~L~~~l~~~ll~~p~~ffd--~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~ 1055 (1622)
T PLN03130 978 IMSSLYAAKRLHDAMLGSILRAPMSFFH--TNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTIS 1055 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhc--cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 78999999999999999999999999999998888888888777777643
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH----HHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHH
Q 000909 810 AVVMIAVQPLTILCFYTRKVLLSSVSTNFVKA----QNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARK 885 (1230)
Q Consensus 810 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~ 885 (1230)
. ++++|+.+++++.+.++. +..++.++. .+...+++.|++.|++|||+|+.++++.+.+.+..+...+....
T Consensus 1056 ~---~~~~pl~~~~~~~~~~~~-~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~ 1131 (1622)
T PLN03130 1056 L---WAIMPLLVLFYGAYLYYQ-STAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLV 1131 (1622)
T ss_pred H---HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 333444443333333332 223333333 34457889999999999999999998888877777665544332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 886 KSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQ-IS-----AGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVAS 959 (1230)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~-~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~r 959 (1230)
.... ..+.++. ...+..+++++.+...+..+. .. .+.++.++.+.......+..+...+.++++.+.+++|
T Consensus 1132 ~~~~-~~wl~~~--l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveR 1208 (1622)
T PLN03130 1132 NMSS-NRWLAIR--LETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVER 1208 (1622)
T ss_pred HHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 1111111 111111222222333343332 11 3455555666677777888888889999999999999
Q ss_pred HHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHH
Q 000909 960 VFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGL 1039 (1230)
Q Consensus 960 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~l 1039 (1230)
+.++++.+++.+.... +..+++.||..|.|+|+||+|+|++. .++||+|+||+|+|||+||||||||||||||+++
T Consensus 1209 i~e~~~~~~E~~~~~~---~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~l 1284 (1622)
T PLN03130 1209 VGTYIDLPSEAPLVIE---NNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNA 1284 (1622)
T ss_pred HHHHhCCCCccccccc---CCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 9999987766432110 11123346678999999999999643 3479999999999999999999999999999999
Q ss_pred HhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhcccc
Q 000909 1040 IQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDG 1119 (1230)
Q Consensus 1040 L~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~g 1119 (1230)
|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||||||++++ +++|+|+|+|++.++++++|+++|+|
T Consensus 1285 L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~G 1363 (1622)
T PLN03130 1285 LFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLG 1363 (1622)
T ss_pred HhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccc
Confidence 99999999999999999999999999999999999999999999999999886 68999999999999999999999999
Q ss_pred ccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEE
Q 000909 1120 YETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIA 1199 (1230)
Q Consensus 1120 ldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~ 1199 (1230)
|||+|||+|.+|||||||||||||||+|+|+|||||||||+||.+||+.||++|++.+++||+|+||||++|+++||||+
T Consensus 1364 Ldt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIl 1443 (1622)
T PLN03130 1364 LDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRIL 1443 (1622)
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCcEEEEecCHhHHhhc-ccccHHHhhhc
Q 000909 1200 LVADGRVVERGTYAQLTHM-RGAFFNLATLQ 1229 (1230)
Q Consensus 1200 vl~~G~Ive~Gt~~eLl~~-~g~y~~l~~~q 1229 (1230)
||++|+|+|+|+|+||+++ +|.|++|++.+
T Consensus 1444 VLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~ 1474 (1622)
T PLN03130 1444 VLDAGRVVEFDTPENLLSNEGSAFSKMVQST 1474 (1622)
T ss_pred EEECCEEEEeCCHHHHHhCCCCHHHHHHHHc
Confidence 9999999999999999998 69999999764
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.5e-158 Score=1579.83 Aligned_cols=1150 Identities=20% Similarity=0.234 Sum_probs=851.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 27 LGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTSERQVV 106 (1230)
Q Consensus 27 ~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 106 (1230)
++.++.++..++....|++++.+++.+... +.. .....++.++++..++..++.....+...+.+.++..
T Consensus 305 ~~~~~~i~~~~~~~~~P~ll~~li~~~~~~-------~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~ 374 (1495)
T PLN03232 305 LGGIFKIGHDLSQFVGPVILSHLLQSMQEG-------DPA---WVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRS 374 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------Ccc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555557889999876422 110 0011111111111122222211112223567777778
Q ss_pred HHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH--
Q 000909 107 KIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTYFSWRLSLVAFP-- 184 (1230)
Q Consensus 107 ~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~-- 184 (1230)
.++..+|+|+++++..++++ .++| +++|++++|++.+++.+ ..+..++..++.+++++++++ +.+++++++
T Consensus 375 ~l~~~i~~k~l~l~~~~~~~-~~~G--~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~---~~lg~~~l~~~ 447 (1495)
T PLN03232 375 TLVAAIFHKSLRLTHEARKN-FASG--KVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLY---QQLGVASLFGS 447 (1495)
T ss_pred HHHHHHHHHHhcCChhhcCC-CCHH--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---HHHhHHHHHHH
Confidence 88889999999999999886 4445 99999999999999986 345555555544444443332 223333222
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 185 -TLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAV 263 (1230)
Q Consensus 185 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (1230)
++++++++..++.++..+..++.++..+++.+.+.|.++|+++||+|+||+.+.+++++.++++.+...+.....++..
T Consensus 448 ~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~ 527 (1495)
T PLN03232 448 LILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNS 527 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223334456678889999999999999999999999999999999999999999999999998888777766555433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 000909 264 GSTGLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPEIDGEDT 343 (1230)
Q Consensus 264 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~ 343 (1230)
..... ....+.++++|++.+..+.+++|.+++++.++.....|+..+...+..+.++.++++|+.++++.+++.+...
T Consensus 528 ~~~~~-~~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~- 605 (1495)
T PLN03232 528 FILNS-IPVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN- 605 (1495)
T ss_pred HHHHH-HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc-
Confidence 22211 1122334678888888899999999999999999999999888899999999999999999998654322111
Q ss_pred CCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC
Q 000909 344 KGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR 423 (1230)
Q Consensus 344 ~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~ 423 (1230)
.......+.|+++|++|+|++++++++|+|+||+|++||+++||||||||||||+++|+|+++|++|.+.
T Consensus 606 --~~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~-------- 675 (1495)
T PLN03232 606 --PPLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV-------- 675 (1495)
T ss_pred --CCcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE--------
Confidence 0111123479999999999854456799999999999999999999999999999999999999998763
Q ss_pred CCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHH
Q 000909 424 LQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIA 503 (1230)
Q Consensus 424 ~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~ 503 (1230)
++|++|+||+|+||||++||||||.||.+ .+++++.++++.++++++++.+|+|++|.+||+|.+|||||||||+
T Consensus 676 ----~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIa 750 (1495)
T PLN03232 676 ----VIRGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVS 750 (1495)
T ss_pred ----EecCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHH
Confidence 25679999999999999999999999985 6788899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhc
Q 000909 504 IARAIIKNPVILLLDEATSALDSESETLVQN-ALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRI 582 (1230)
Q Consensus 504 iARal~~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 582 (1230)
||||+|++|+|+||||||||||+++++.+.+ ++....+++|+|+||||++.++.||+|++|++|+++++|+|+|++++
T Consensus 751 LARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~- 829 (1495)
T PLN03232 751 MARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS- 829 (1495)
T ss_pred HHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-
Confidence 9999999999999999999999999987754 56666689999999999999999999999999999999999999985
Q ss_pred CcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCC-CCCCCCCCCCCchHHHHHHhhhhhhh
Q 000909 583 DGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLP-VIDSPQPVTYLPPSFFRLLSLNAPEW 661 (1230)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1230)
++.|.+++..+......+++..............................+.. ...+++........+..+.+|.+..+
T Consensus 830 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~ 909 (1495)
T PLN03232 830 GSLFKKLMENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVG 909 (1495)
T ss_pred chhHHHHHHhcccccccccccccccccccccccccccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcC
Confidence 78888887665432111110000000000000000000000000000000000 00000011122233445555544422
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 662 K--QGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKR 739 (1230)
Q Consensus 662 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1230)
. ...+.+++............++++.|. ..... .......|.++|++++++..++.+++.+++...+.+++.+
T Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~----~~~~~-~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1495)
T PLN03232 910 GLWVVMILLVCYLTTEVLRVSSSTWLSIWT----DQSTP-KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKR 984 (1495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cccCC-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 111111111111111111222222221 11100 0122456888899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 740 IRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPL 819 (1230)
Q Consensus 740 l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~ 819 (1230)
+|++++++++++|++||| ++++|+++||+++|++.++..++..+..++..++.+++++++++.+++... ++++|+
T Consensus 985 lr~~l~~~ll~~p~~ff~--~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~---~~~~~~ 1059 (1495)
T PLN03232 985 LHDAMLNSILRAPMLFFH--TNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISL---WAIMPL 1059 (1495)
T ss_pred HHHHHHHHHHcCCeeeeC--cCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 999999999999999998 789999999999999999999999888888888887777777666665332 233444
Q ss_pred HHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 820 TILCFYTRKVLLS---SVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGS 896 (1230)
Q Consensus 820 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (1230)
.+++++.+.++.+ ...+......+...+++.|++.|+++||+||.++++.+++++..+...+........ ..+..+
T Consensus 1060 ~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~wl~~ 1138 (1495)
T PLN03232 1060 LILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSS-NRWLTI 1138 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 4443333332221 122222333345678899999999999999999998888877776666544332211 112211
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 000909 897 AQCLTFMSWALDFWYGGTLVQ-KGQIS-----AGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLI 970 (1230)
Q Consensus 897 ~~~~~~~~~~~~~~~g~~lv~-~g~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~ 970 (1230)
.. ..+..++.++.+...+. .|.+. .+.++.++.+...+..++..+...+.+++.++.+++|+.++++.+++.
T Consensus 1139 ~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~ 1216 (1495)
T PLN03232 1139 RL--ETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEA 1216 (1495)
T ss_pred HH--HHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 11 11122222222333333 23321 233444555566677788888999999999999999999999877664
Q ss_pred CCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCe
Q 000909 971 PGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGS 1050 (1230)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1050 (1230)
+.... +..+++.|+..|+|+|+||+|+|++. .++||+|+||+|+|||+||||||||||||||+++|+|+|+|++|+
T Consensus 1217 ~~~~~---~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1292 (1495)
T PLN03232 1217 TAIIE---NNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGR 1292 (1495)
T ss_pred ccccc---CCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCce
Confidence 32100 11122346677999999999999633 357999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCC
Q 000909 1051 VRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQ 1130 (1230)
Q Consensus 1051 I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~ 1130 (1230)
|+|||+||+++++++||++|++|||||+||+|||||||++++ +++|+|+|+|++.++++++|+++|+||||++||+|.+
T Consensus 1293 I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~ 1371 (1495)
T PLN03232 1293 IMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGEN 1371 (1495)
T ss_pred EEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCC
Confidence 999999999999999999999999999999999999999886 7899999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEec
Q 000909 1131 LSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERG 1210 (1230)
Q Consensus 1131 LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~G 1210 (1230)
|||||||||||||||+++|+|||||||||+||++||+.||++|++.+++||+|+||||++|+++||||+||++|+|+|.|
T Consensus 1372 LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~G 1451 (1495)
T PLN03232 1372 FSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYD 1451 (1495)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHhHHhhcc-cccHHHhhhc
Q 000909 1211 TYAQLTHMR-GAFFNLATLQ 1229 (1230)
Q Consensus 1211 t~~eLl~~~-g~y~~l~~~q 1229 (1230)
+|+||++++ |.|++|++.+
T Consensus 1452 t~~eLl~~~~~~f~~l~~~~ 1471 (1495)
T PLN03232 1452 SPQELLSRDTSAFFRMVHST 1471 (1495)
T ss_pred CHHHHHhCCCCHHHHHHHHh
Confidence 999999986 5999999865
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.3e-153 Score=1538.00 Aligned_cols=1158 Identities=19% Similarity=0.212 Sum_probs=866.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 29 TVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKI 108 (1230)
Q Consensus 29 ~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l 108 (1230)
++..++..++....|++++.+++.+.... ... .....++..++++.++..++.....+...+.+.++...+
T Consensus 323 ~~~~l~~~~~~~~~P~ll~~li~~~~~~~------~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L 393 (1522)
T TIGR00957 323 FCFKAIHDLMMFIGPQILSLLIRFVNDPM------APD---WQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAV 393 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC------ccc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444577889998764320 110 011112222222333333333333444567788888999
Q ss_pred HHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000909 109 RYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTYFSWRLSLVAFPTLLL 188 (1230)
Q Consensus 109 r~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~~~~~ 188 (1230)
+..+|+|+++++..++++ .++| +++|++++|++++.++.. .+..++..++.+++++++++..-...+++.++++++
T Consensus 394 ~~~iy~K~L~l~~~~~~~-~~~G--~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~ 469 (1522)
T TIGR00957 394 MGAVYRKALVITNSARKS-STVG--EIVNLMSVDAQRFMDLAT-YINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVL 469 (1522)
T ss_pred HHHHHHHHHhCChhhcCC-CCHH--HHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999886 4445 999999999999988653 445555555555555444433222234555566667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 189 LIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAVGSTGL 268 (1230)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (1230)
++++..++.+++++..++.++..+++.+.+.|.++||++||+|+||+.+.+++++.++++.+...+......+.......
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~ 549 (1522)
T TIGR00957 470 MVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVC 549 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888899999999999999999999999999999999999999999999999998888766665554443222111
Q ss_pred HHHHHHHHHHHHHHHHHh--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCc
Q 000909 269 SFAIWAFLAWYGSHLVMF--KGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPEIDGEDTKGL 346 (1230)
Q Consensus 269 ~~~~~~~~~~~g~~~~~~--~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~ 346 (1230)
. ...+.++.++.+.+.. +.++.+.+++.+.++..+..|+..+...+..+.++..+.+|+.++++.+++.+.......
T Consensus 550 ~-~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~ 628 (1522)
T TIGR00957 550 T-PFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRT 628 (1522)
T ss_pred H-HHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccc
Confidence 1 1122223345555553 467889999888888888889999999999999999999999999976543211100000
Q ss_pred ccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH
Q 000909 347 VLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL 426 (1230)
Q Consensus 347 ~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~ 426 (1230)
......+.|+++|++|+|++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||
T Consensus 629 ~~~~~~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------- 699 (1522)
T TIGR00957 629 IKPGEGNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG-------- 699 (1522)
T ss_pred cCCCCCCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC--------
Confidence 001112379999999999743 35699999999999999999999999999999999999999999999997
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
+|+||+|+||+|++||+|||.+|.+ .+.++..++++.+++.+++..+|+|++|.+|++|.+|||||||||+|||
T Consensus 700 -----~i~yv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLAR 773 (1522)
T TIGR00957 700 -----SVAYVPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLAR 773 (1522)
T ss_pred -----EEEEEcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHH
Confidence 6999999999999999999999975 3456667777888888999999999999999999999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHH---hcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcC
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQ---ASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRID 583 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~---~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 583 (1230)
|++++|+|+|||||||+||+++++.+.+.+.+ ..+++|+|+|||+++.+..||+|++|++|+++++|+|+++.++ +
T Consensus 774 Al~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~-~ 852 (1522)
T TIGR00957 774 AVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQR-D 852 (1522)
T ss_pred HHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhc-c
Confidence 99999999999999999999999999998853 4568999999999999999999999999999999999999984 7
Q ss_pred cHHHHHHHHhhcccCCCC-C-C------Cccccc---c---ccc--ccC--CCC---ccccCCCCccc---CCCCCCCC-
Q 000909 584 GHYAKMAKLQRQFSCDDQ-E-T------IPETHV---S---SVT--RSS--GGR---LSAARSSPAIF---ASPLPVID- 638 (1230)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~-~-~------~~~~~~---~---~~~--~~~--~~~---~~~~~~~~~~~---~~~~~~~~- 638 (1230)
+.|.++...+......+. + . .+.... + ... ... ... ........... .......+
T Consensus 853 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1522)
T TIGR00957 853 GAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEA 932 (1522)
T ss_pred hhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccccccccc
Confidence 788887764432111000 0 0 000000 0 000 000 000 00000000000 00000000
Q ss_pred --C------CCCCCCCchHHHHHHhhhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHH
Q 000909 639 --S------PQPVTYLPPSFFRLLSLNAPE-WKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSL 709 (1230)
Q Consensus 639 --~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (1230)
. ++........+..+++|.+.. +...++.+++..+.........++++.|.+.... .........|..
T Consensus 933 ~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~---~~~~~~~~~~~~ 1009 (1522)
T TIGR00957 933 KEETWKLMEADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMV---NGTQNNTSLRLS 1009 (1522)
T ss_pred ccchhhhHHHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cCCCCCcchHHH
Confidence 0 000011112233333333322 2211111122222222222333444443321110 000112345667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000909 710 IFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLV 789 (1230)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~ 789 (1230)
+|++++++..++.++..+++.+.+.+++.++|++++++++++|++||| .+++|+++|||++|++.++..++..+..++
T Consensus 1010 iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnR~s~Di~~id~~l~~~~~~~~ 1087 (1522)
T TIGR00957 1010 VYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFE--RTPSGNLVNRFSKELDTVDSMIPPVIKMFM 1087 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888899999999999999999999999999999998 789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHH
Q 000909 790 QTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVL 869 (1230)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~ 869 (1230)
..++.+++.++++++.+|.+++++++++++..+...++.+..+...+......+...+++.|++.|+++||+||.++++.
T Consensus 1088 ~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~ 1167 (1522)
T TIGR00957 1088 GSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFI 1167 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHH
Confidence 99999988888888888766554444333332222222222222222223334556799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 870 QIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQ-KGQISAGDVFKTFFILVSTGKVIAEAGSMTS 948 (1230)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1230)
+++.+..+...+..........+.......+. .+++++.++..+. .|.+++|.+++++.+...+..++..+...+.
T Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~ 1244 (1522)
T TIGR00957 1168 HQSDLKVDENQKAYYPSIVANRWLAVRLECVG---NCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSS 1244 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888877765443333222222222221 2233344444443 6889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcC
Q 000909 949 DLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGK 1028 (1230)
Q Consensus 949 ~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~ 1028 (1230)
+++.++.|++|+.++++.+++.+... ++..+++.|+..|+|+|+||+|+|+++ .++||+|+||+|+|||+||||||
T Consensus 1245 ~~e~~~~s~eRi~~~~~~~~e~~~~~---~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGr 1320 (1522)
T TIGR00957 1245 EMETNIVAVERLKEYSETEKEAPWQI---QETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGR 1320 (1522)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccc---cCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECC
Confidence 99999999999999998766543110 011122346778999999999999754 24699999999999999999999
Q ss_pred CCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhc
Q 000909 1029 SGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAAN 1108 (1230)
Q Consensus 1029 SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~ 1108 (1230)
||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||++.. +++|+|+|+|++.|+
T Consensus 1321 TGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~ 1399 (1522)
T TIGR00957 1321 TGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAH 1399 (1522)
T ss_pred CCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999998543 689999999999999
Q ss_pred hHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccC
Q 000909 1109 AHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHR 1188 (1230)
Q Consensus 1109 l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHr 1188 (1230)
++++|.++|+||||+|||+|.+|||||||||||||||+++|+|||||||||+||++||+.||++|++.+++||+|+||||
T Consensus 1400 l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHR 1479 (1522)
T TIGR00957 1400 LKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHR 1479 (1522)
T ss_pred cHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHhhhc
Q 000909 1189 LNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1189 l~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
++++.+||||+|||+|+|+|+|+|+||++++|.|++|++..
T Consensus 1480 l~ti~~~DrIlVld~G~IvE~G~~~eLl~~~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1480 LNTIMDYTRVIVLDKGEVAEFGAPSNLLQQRGIFYSMAKDA 1520 (1522)
T ss_pred HHHHHhCCEEEEEECCEEEEECCHHHHHhCCCHHHHHHHHc
Confidence 99999999999999999999999999999999999999863
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=8.9e-147 Score=1468.30 Aligned_cols=1161 Identities=17% Similarity=0.191 Sum_probs=863.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 26 VLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTSERQV 105 (1230)
Q Consensus 26 ~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 105 (1230)
++.++..++..++....|++++.+++.+... +.. ......+++.+++..++..++.....+...+.+.++.
T Consensus 247 ~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~-------~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r 317 (1560)
T PTZ00243 247 WWQIPFKLLSDVCTLTLPVLLKYFVKFLDAD-------NAT--WGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYR 317 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------Ccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444554455555557788888865322 110 0111112222333334444555555566677777888
Q ss_pred HHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000909 106 VKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTYFSWRLSLVAFPT 185 (1230)
Q Consensus 106 ~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~~ 185 (1230)
..++..+|+|+++++...+.+ ...++|+++|.+++|++.+.+++.. +..++...+.+++++++++.+..+.+++.+++
T Consensus 318 ~~L~~~if~K~l~ls~~~~~~-~~~~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~v 395 (1560)
T PTZ00243 318 SALNALIFEKCFTISSKSLAQ-PDMNTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRLVGWCALMAVAV 395 (1560)
T ss_pred HHHHHHHHHHHHhCChhhhCC-CCCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 888889999999999877652 1223459999999999999999844 45666677777777777776666678888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 186 LLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAVGS 265 (1230)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (1230)
+++++++..++.++..+.+++.++..+++.+.+.|.++|||+||+++||+.+.+++++.++++.+...+......+...+
T Consensus 396 l~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~ 475 (1560)
T PTZ00243 396 LLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFV 475 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999999999999999999999999999999999999988877766666554433
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC----CC
Q 000909 266 TGLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPEID----GE 341 (1230)
Q Consensus 266 ~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~----~~ 341 (1230)
...... .+.+..++++.+..+.++++.+|+++.++..+..|+..+...+..+.++.+|++||.++++.++... +.
T Consensus 476 ~~~~p~-l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~ 554 (1560)
T PTZ00243 476 NNATPT-LMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDM 554 (1560)
T ss_pred HHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccc
Confidence 322111 2223345677778889999999999999999999999999999999999999999999997543100 00
Q ss_pred -C--------CC--C---------------cc---------------------------cCCccccEEEEEEEEECCCC-
Q 000909 342 -D--------TK--G---------------LV---------------------------LDEVRGEIEFEHVKFSYPSR- 367 (1230)
Q Consensus 342 -~--------~~--~---------------~~---------------------------~~~~~~~i~~~~v~~~y~~~- 367 (1230)
+ .. . .. .....+.+.++|++|+++..
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1560)
T PTZ00243 555 EEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSA 634 (1560)
T ss_pred hhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccc
Confidence 0 00 0 00 00011357788887765310
Q ss_pred ------------------------------------CCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000909 368 ------------------------------------PDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADD 411 (1230)
Q Consensus 368 ------------------------------------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 411 (1230)
.++++|+|+||+|++||+++|+||||||||||+++|+|+++|++
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~ 714 (1560)
T PTZ00243 635 SRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISE 714 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCC
Confidence 12458999999999999999999999999999999999999999
Q ss_pred ceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCC
Q 000909 412 GIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERG 491 (1230)
Q Consensus 412 G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 491 (1230)
|+|.++ ++||||+|+||+|++||+|||.++.+. +.+++.++.+.++++++++.+|+|++|.+|++|
T Consensus 715 G~i~~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g 780 (1560)
T PTZ00243 715 GRVWAE-------------RSIAYVPQQAWIMNATVRGNILFFDEE-DAARLADAVRVSQLEADLAQLGGGLETEIGEKG 780 (1560)
T ss_pred cEEEEC-------------CeEEEEeCCCccCCCcHHHHHHcCChh-hHHHHHHHHHHhhhHHHHHHhhccchHHhcCCC
Confidence 999874 379999999999999999999998642 445566777788899999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEE
Q 000909 492 ALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQN-ALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLV 570 (1230)
Q Consensus 492 ~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~ 570 (1230)
.+|||||||||+||||++++|+|+|||||||+||+++++.+.+ ++....+|+|+|+|||+++.+..||+|++|++|+++
T Consensus 781 ~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~ 860 (1560)
T PTZ00243 781 VNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVE 860 (1560)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999998877765 444445689999999999999999999999999999
Q ss_pred EecChhHHHhhcCcHHHHHHHHhhcccCC-CCCCCcccccccccccC----CCCccccCCCCccc-CCCCCCC--C--CC
Q 000909 571 EIGTHNDLINRIDGHYAKMAKLQRQFSCD-DQETIPETHVSSVTRSS----GGRLSAARSSPAIF-ASPLPVI--D--SP 640 (1230)
Q Consensus 571 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~--~--~~ 640 (1230)
++|+++++++ .+.|.++........+. +.+...+.......... .............. ....+.. . ..
T Consensus 861 ~~G~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 938 (1560)
T PTZ00243 861 FSGSSADFMR--TSLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRLMTR 938 (1560)
T ss_pred EecCHHHHHh--ChHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchhhhH
Confidence 9999999986 35677665542221110 00000000000000000 00000000000000 0000000 0 00
Q ss_pred CCCCCCchHHHHHHhhhhhhhHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHH
Q 000909 641 QPVTYLPPSFFRLLSLNAPEWKQG-LIG-SLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLIS 718 (1230)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 718 (1230)
+........|..+..|.+...... .+. +++.++.........++++.|... . .......|+.+|++++++.
T Consensus 939 e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~-----~--~~~~~~~~l~~y~~~~~~~ 1011 (1560)
T PTZ00243 939 EEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTR-----S--FKLSAATYLYVYLGIVLLG 1011 (1560)
T ss_pred HHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----c--cCCCcccHHHHHHHHHHHH
Confidence 000112223434433333211111 111 111111111111222222222211 0 1112335667777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 719 LAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIA 798 (1230)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~ 798 (1230)
.++.+++.+.....+.+.+.++|+++|++++++|+.||| ++++|+++|||++|++.++..++..+..++..++.+++.
T Consensus 1012 ~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd--~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~ 1089 (1560)
T PTZ00243 1012 TFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFD--TTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSS 1089 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhcc--CCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777777788888999999999999999999999 789999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH----HHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHH
Q 000909 799 MIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVK----AQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDE 874 (1230)
Q Consensus 799 ~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~ 874 (1230)
++++++.+|.+. ++++|+.++++++..++ ....++.++ ..+...+++.|++.|+++||+||.++.+.++|.+
T Consensus 1090 li~~~~~~p~~~---~~~i~~~~~~~~i~~~~-~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~ 1165 (1560)
T PTZ00243 1090 ILVTSASQPFVL---VALVPCGYLYYRLMQFY-NSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALR 1165 (1560)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHH
Confidence 888888887443 33344443333333322 222333333 3455679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 875 AQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGT--LVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAK 952 (1230)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 952 (1230)
..+...+..........+......++..+..+++.+++.. +...+.+++|.++.++.+...+..++..+...+.+++.
T Consensus 1166 ~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~ 1245 (1560)
T PTZ00243 1166 RLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEA 1245 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877665544333333333333333333333333333 33345678998888888888888999999999999999
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-CC--------------------CCCCCCC---CcccccCcEEEEEEEEECCCCCCcc
Q 000909 953 GSTAVASVFKILDRQSLIPGSS-QA--------------------GDGTRGS---KLQKISGKIEMRRVDFAYPSRPDAL 1008 (1230)
Q Consensus 953 ~~~s~~ri~~~~~~~~~~~~~~-~~--------------------~~~~~~~---~~~~~~g~I~f~~Vsf~Y~~~~~~~ 1008 (1230)
++.+++|+.++++..++++... .. .+...++ +.++..|.|+|+||+|+|++. .++
T Consensus 1246 ~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~ 1324 (1560)
T PTZ00243 1246 DMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPL 1324 (1560)
T ss_pred HHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCc
Confidence 9999999999997544321000 00 0000000 123356899999999999753 346
Q ss_pred cccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHh
Q 000909 1009 VLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNI 1088 (1230)
Q Consensus 1009 vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl 1088 (1230)
||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||
T Consensus 1325 vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNI 1404 (1560)
T PTZ00243 1325 VLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNV 1404 (1560)
T ss_pred eeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccC-CCEEEeecccCCcCHHHHH
Q 000909 1089 VFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRN-PTILLLDEATSALDVQSEQ 1167 (1230)
Q Consensus 1089 ~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~-p~ILlLDEaTSaLD~~te~ 1167 (1230)
++++ +++|+|+|+|++.++++++|.++|+||||.|||+|.+|||||||||||||||+++ |+|||||||||+||++||+
T Consensus 1405 dp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~ 1483 (1560)
T PTZ00243 1405 DPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDR 1483 (1560)
T ss_pred Cccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHH
Confidence 8764 7899999999999999999999999999999999999999999999999999996 8999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhc-ccccHHHhhhc
Q 000909 1168 VVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHM-RGAFFNLATLQ 1229 (1230)
Q Consensus 1168 ~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~-~g~y~~l~~~q 1229 (1230)
.|+++|++.+++||+|+||||++|+.+||+|+||++|+|+|.|+|+||+++ +|.|++|++.+
T Consensus 1484 ~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1484 QIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999986 89999999865
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=9.4e-145 Score=1449.71 Aligned_cols=1137 Identities=18% Similarity=0.223 Sum_probs=837.7
Q ss_pred HHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 000909 40 NCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQ 119 (1230)
Q Consensus 40 p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 119 (1230)
.+.|++++.+++.+.... ... ......+++.++++.++..++.....+.....+.++-..+...+|+|++++
T Consensus 97 ~~~P~ll~~li~~~~~~~------~~~--~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l 168 (1490)
T TIGR01271 97 AVQPLLLGRIIASYDPFN------APE--REIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTLKL 168 (1490)
T ss_pred HHHHHHHHHHHHHhccCC------CCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 334467888888763210 000 011112222233333344444444555555666667777777779999999
Q ss_pred CchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 120 EVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKY 199 (1230)
Q Consensus 120 ~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~ 199 (1230)
+...+++ .++| +++|++++|++.+.+++... ..++...+.+++++++++....+.+++.++++++++++..+++++
T Consensus 169 ~~~~~~~-~~~g--~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~ 244 (1490)
T TIGR01271 169 SSRVLDK-ISTG--QLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQK 244 (1490)
T ss_pred CHHHhcC-CCHH--HHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998885 4445 99999999999999987643 344455555666666666655567788888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 200 LIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAVGSTGLSFAIWAFLAWY 279 (1230)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (1230)
+.+..++.++..+++.+.+.|.++|||+||+|+||+.+.+++++.++++.+...+......+...+... ....+.++.+
T Consensus 245 ~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~-~~~~~~~~~f 323 (1490)
T TIGR01271 245 MMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFF-SGFFVVFLSV 323 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988877776655433332222 2223344555
Q ss_pred HHHHHHhcCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccCCccccEEEE
Q 000909 280 GSHLVMFKGETGGKIYAAGISFILSGLSLG-SALPELKYFTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFE 358 (1230)
Q Consensus 280 g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 358 (1230)
+++.+.. ..+++.+|+++.++..+..|+. .+...+..+.++.++++||.+++..++..+. . . ......|+++
T Consensus 324 ~~y~~~~-~~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~-~---~--~~~~~~i~~~ 396 (1490)
T TIGR01271 324 VPYALIK-GIILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTL-E---Y--NLTTTEVEMV 396 (1490)
T ss_pred HHHHHhC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc-c---c--cCCCCceEEe
Confidence 6666554 4688999998888887777764 5777889999999999999999976432111 1 0 1112359999
Q ss_pred EEEEECCCCC-------------------------------CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC
Q 000909 359 HVKFSYPSRP-------------------------------DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFY 407 (1230)
Q Consensus 359 ~v~~~y~~~~-------------------------------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~ 407 (1230)
|++|.|+... .+++|+|+||+|++||+++|+||||||||||+++|+|++
T Consensus 397 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~ 476 (1490)
T TIGR01271 397 NVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGEL 476 (1490)
T ss_pred cceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 9999995310 135899999999999999999999999999999999999
Q ss_pred CCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchh
Q 000909 408 DADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKV 487 (1230)
Q Consensus 408 ~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~ 487 (1230)
+|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+.++..++++.+++.+++..+|+|++|.+
T Consensus 477 ~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~v 542 (1490)
T TIGR01271 477 EPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTVL 542 (1490)
T ss_pred CCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhccccccccc
Confidence 99999999998 5999999999999999999999864 334455566777788899999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCCeEEEEecCchhhhccCEEEEEeC
Q 000909 488 GERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQN-ALDQASLGRTTLVVAHKLSTVRNADLIAVVDN 566 (1230)
Q Consensus 488 ~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~ 566 (1230)
|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+ ++.+..+++|+|+|||+++.+..||+|++|++
T Consensus 543 g~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~ 622 (1490)
T TIGR01271 543 GEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHE 622 (1490)
T ss_pred cCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999987 46666679999999999999999999999999
Q ss_pred CeEEEecChhHHHhhcCcHHHHHHHHhhccc--------------------C--------CCC------CCCccccccc-
Q 000909 567 GCLVEIGTHNDLINRIDGHYAKMAKLQRQFS--------------------C--------DDQ------ETIPETHVSS- 611 (1230)
Q Consensus 567 G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~--------------------~--------~~~------~~~~~~~~~~- 611 (1230)
|++++.|+++++.+. ++.|.+......... . .+. +...+.....
T Consensus 623 g~i~~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1490)
T TIGR01271 623 GVCYFYGTFSELQAK-RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRK 701 (1490)
T ss_pred CEEEEEcCHHHHHhc-ChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999874 556655543110000 0 000 0000000000
Q ss_pred -----c----------------c---ccCCCCc---c-------c---------cCC-C---------Ccc-------cC
Q 000909 612 -----V----------------T---RSSGGRL---S-------A---------ARS-S---------PAI-------FA 631 (1230)
Q Consensus 612 -----~----------------~---~~~~~~~---~-------~---------~~~-~---------~~~-------~~ 631 (1230)
. . ....... . . ... . ... ..
T Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1490)
T TIGR01271 702 QSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTH 781 (1490)
T ss_pred ccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccc
Confidence 0 0 0000000 0 0 000 0 000 00
Q ss_pred ----------------------------CCCC------CCC------C----C---------CCCCCCchHHHHHHhhhh
Q 000909 632 ----------------------------SPLP------VID------S----P---------QPVTYLPPSFFRLLSLNA 658 (1230)
Q Consensus 632 ----------------------------~~~~------~~~------~----~---------~~~~~~~~~~~~~~~~~~ 658 (1230)
...+ ..+ . . +........|..+++|.+
T Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~ 861 (1490)
T TIGR01271 782 SNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYIT 861 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHH
Confidence 0000 000 0 0 000011223333333332
Q ss_pred hh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------hhh-H---------hhhHHHH-HHHHHHHHHH
Q 000909 659 PE--WKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKS--------HSE-M---------QSRIRTY-SLIFCSLSLI 717 (1230)
Q Consensus 659 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~---------~~~~~~~-~~~~~~~~~~ 717 (1230)
.. +....+.+++.++.........+|+.. |+... ... . .....+| ..+|++++++
T Consensus 862 ~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1490)
T TIGR01271 862 TNRNLVFVLIFCLVIFLAEVAASLLGLWLIT----DNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADS 937 (1490)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHhhHHHHh----cccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHH
Confidence 21 111111112222222222222222222 22100 000 0 0011223 3345555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 718 SLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAI 797 (1230)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~ 797 (1230)
..++.+++.+++.+.+.+++.++|.+++++++++|+.||+ .+++|+++|||++|++.++..++..+..++..++.+++
T Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~ 1015 (1490)
T TIGR01271 938 VLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLN--TMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLG 1015 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677788888999999999999999999999999999998 78999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH----HHHHHHHHHHHHHhchHHHHHHchHHHHHHHHH
Q 000909 798 AMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVK----AQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFD 873 (1230)
Q Consensus 798 ~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~ 873 (1230)
.++++++++|.+.+ +++|++++++++..++.+. .++.++ ..+...+++.|++.|+.+||+||.++.+.+++.
T Consensus 1016 ~l~~i~~~~p~l~l---~~~~l~~~~~~~~~~~~~~-~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~ 1091 (1490)
T TIGR01271 1016 AIFVVSVLQPYIFI---AAIPVAVIFIMLRAYFLRT-SQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFH 1091 (1490)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHH
Confidence 88888888876544 3444444443333333322 333333 334467899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 874 EAQEEPRKQARKKSWLAGIGMGSAQCLTFMSW--ALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLA 951 (1230)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 951 (1230)
+..+...+..........+.......+..+.. ++.++++. ..++.|.++.++.+...+..++..+...+.+++
T Consensus 1092 ~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le 1166 (1490)
T TIGR01271 1092 KALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVD 1166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99886554333221111111111111111111 11122222 234566677767777777788888899999999
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCCC-----------CCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCC
Q 000909 952 KGSTAVASVFKILDRQSLIPGSSQAG-----------DGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPG 1020 (1230)
Q Consensus 952 ~~~~s~~ri~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~G 1020 (1230)
..+.+++|+.++.+.+++.+...... +....++.||..|.|+|+||+|+|++. .++||+|+||+|+||
T Consensus 1167 ~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~G 1245 (1490)
T TIGR01271 1167 GLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGG 1245 (1490)
T ss_pred HHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCC
Confidence 99999999999998776543211100 001122346778999999999999753 457999999999999
Q ss_pred cEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHH
Q 000909 1021 TSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEV 1100 (1230)
Q Consensus 1021 e~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei 1100 (1230)
||||||||||||||||+++|+|+|+ ++|+|+|||+||++++++++|++|++|||||+||+||||+||++.. +++|+++
T Consensus 1246 ekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei 1323 (1490)
T TIGR01271 1246 QRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEI 1323 (1490)
T ss_pred CEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHH
Confidence 9999999999999999999999998 7999999999999999999999999999999999999999998654 6899999
Q ss_pred HHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCC
Q 000909 1101 VEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGR 1180 (1230)
Q Consensus 1101 ~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~ 1180 (1230)
|+||+.++++++|.++|+||||+|+|+|.+|||||||||||||||+++|+|||||||||+||++||+.|++.|++.+++|
T Consensus 1324 ~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~ 1403 (1490)
T TIGR01271 1324 WKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNC 1403 (1490)
T ss_pred HHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHhhhc
Q 000909 1181 TTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1181 TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
|||+||||++++.+||||+||++|+|+|.|+|++|++++|.|++|++.+
T Consensus 1404 TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~ 1452 (1490)
T TIGR01271 1404 TVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNETSLFKQAMSAA 1452 (1490)
T ss_pred EEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHHHHHh
Confidence 9999999999999999999999999999999999999899999999865
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-111 Score=982.85 Aligned_cols=569 Identities=36% Similarity=0.579 Sum_probs=541.9
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 649 SFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYN 728 (1230)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1230)
.+++++.+.+|+|+++..+.++..+........|.+.+.+++.+... .+...........+.++.++++++++++.++
T Consensus 134 ~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~--~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~ 211 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEG--DDSADALKRACTILLGLFLIGALANAIRGGL 211 (716)
T ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999988761 1112334445667777888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 729 FAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWK 808 (1230)
Q Consensus 729 ~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 808 (1230)
+.++++++..++|.++|+++++++++||| .|.+|++++|+++|+..+.+.++..+...+.+....++++.+|+.++|.
T Consensus 212 ~~~a~~rv~~rlR~~lF~sil~QdiaFFD--~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~ 289 (716)
T KOG0058|consen 212 LQYAGERVVARLRTDLFRSLLRQDIAFFD--ENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWR 289 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhc--cCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHH
Confidence 99999999999999999999999999999 7889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 809 LAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSW 888 (1230)
Q Consensus 809 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (1230)
++++.+..+|++++...++.++.++.+++.++..+++++...|.+.+++|||+|+.|+...++|.+..++..+..++...
T Consensus 290 Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 290 LTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000909 889 LAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQS 968 (1230)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~ 968 (1230)
..+.+++.+..........++++|++++..|+++.|++..+++|....+..+..+...++++.++..|.+|+++++|++|
T Consensus 370 a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P 449 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKP 449 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCC-cccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC
Q 000909 969 LIPGSSQAGDGTRGSK-LQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE 1047 (1230)
Q Consensus 969 ~~~~~~~~~~~~~~~~-~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~ 1047 (1230)
..+.. +.. +....|.|+|+||+|+||.||+.|||||+||+|+|||+||+||||||||||++++|+|||+|+
T Consensus 450 ~i~~~--------G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt 521 (716)
T KOG0058|consen 450 RIPLT--------GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT 521 (716)
T ss_pred CCCCC--------CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 87643 111 115789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCC
Q 000909 1048 QGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGER 1127 (1230)
Q Consensus 1048 ~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~ 1127 (1230)
+|+|++||+||+++++++||++||+|.|||+||++||+|||.||.+++++|||.+|+++|++|+||.++|+||||.|||+
T Consensus 522 sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 522 SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEK 601 (716)
T ss_pred CCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEE
Q 000909 1128 GVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVV 1207 (1230)
Q Consensus 1128 G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Iv 1207 (1230)
|.+|||||||||||||||+|||+||||||||||||.++|..||++|++..+++|||+|||||+||+.||+|+|+++|+|+
T Consensus 602 G~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~ 681 (716)
T KOG0058|consen 602 GSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVV 681 (716)
T ss_pred cccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCHhHHhhcc-cccHHHhhhc
Q 000909 1208 ERGTYAQLTHMR-GAFFNLATLQ 1229 (1230)
Q Consensus 1208 e~Gt~~eLl~~~-g~y~~l~~~q 1229 (1230)
|.|+|+|||+++ |.|++|+++|
T Consensus 682 E~G~h~eLl~~~~gly~~Lv~~q 704 (716)
T KOG0058|consen 682 EMGTHDELLSKPNGLYAKLVQRQ 704 (716)
T ss_pred ecccHHHHhhCcccHHHHHHHHh
Confidence 999999999996 8999999988
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-106 Score=941.98 Aligned_cols=574 Identities=39% Similarity=0.586 Sum_probs=531.3
Q ss_pred hHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 000909 9 NIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMV 88 (1230)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 88 (1230)
.+++++.|.++..++ +..+.++..+......+.|.+.|+++|.+... .. ....+...+..+.++.++..+
T Consensus 134 ~~~rl~~l~~~~~~~-l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~-------~~--~~~~~~~~~~~l~~l~~~~a~ 203 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKW-LVAAFVLLLVSSLINMFIPYYLGKLIDTISEG-------DD--SADALKRACTILLGLFLIGAL 203 (716)
T ss_pred HHHHHHHHhchhHHH-HHHHHHHHHHHHhhcchhhHHHHHHHHHHHhc-------cc--hHHHHHHHHHHHHHHHHHHHH
Confidence 678999999887554 45666666666666666778999999987541 11 123444556667777888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 000909 89 VAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGL 168 (1230)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~ 168 (1230)
+.+++.+++.+.++++..++|..+|+++++++++|||+ +++| |++||++.|+..+.+.++..+...+.+.+..++++
T Consensus 204 ~~~~r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~-nktG--eL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~ 280 (716)
T KOG0058|consen 204 ANAIRGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDE-NKTG--ELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGL 280 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-CCcc--HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999999997 7788 99999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHH
Q 000909 169 AFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDST 248 (1230)
Q Consensus 169 ~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~ 248 (1230)
++|++++|.|+++.++.+|++.++..+++++.++..++.|++.++.+...+|.+++|||||+|+.|+.+.+||.+..++.
T Consensus 281 ~~M~~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~ 360 (716)
T KOG0058|consen 281 GFMFSLSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREV 360 (716)
T ss_pred HHHhhhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 249 TKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASR 327 (1230)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~r 327 (1230)
.+...|.....+++.... +........++++|++++..|.+|.|.+.+|+.|......++..+...+..++++..|.+|
T Consensus 361 ~~i~~k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~r 440 (716)
T KOG0058|consen 361 LKLSKKEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASER 440 (716)
T ss_pred HHHHHHHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 999988888887777666 6677778889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC
Q 000909 328 IFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFY 407 (1230)
Q Consensus 328 i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~ 407 (1230)
++|++|++|..+... ...+...+|.|+|+||+|+||.+++.++|+|+||+|+|||+||+||||||||||++++|.+||
T Consensus 441 vFel~dr~P~i~~~G--~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY 518 (716)
T KOG0058|consen 441 VFELMDRKPRIPLTG--TLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFY 518 (716)
T ss_pred HHHHhccCCCCCCCC--ccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence 999999999876542 223335789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchh
Q 000909 408 DADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKV 487 (1230)
Q Consensus 408 ~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~ 487 (1230)
+|++|+|.+||+||+++++.+||++||+|.|||.||++||+|||.||.+++++|++..|++.+++|+||.++|+||+|.+
T Consensus 519 ~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~V 598 (716)
T KOG0058|consen 519 DPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVV 598 (716)
T ss_pred CCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCC
Q 000909 488 GERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNG 567 (1230)
Q Consensus 488 ~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G 567 (1230)
||+|.+|||||||||||||||++||.||||||+|||||+++|..+++++.+..+++|||+|+|||+|+++||+|+|+++|
T Consensus 599 GEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G 678 (716)
T KOG0058|consen 599 GEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKG 678 (716)
T ss_pred CCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecChhHHHhhcCcHHHHHHHHhhccc
Q 000909 568 CLVEIGTHNDLINRIDGHYAKMAKLQRQFS 597 (1230)
Q Consensus 568 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~ 597 (1230)
+++|.|+|+||+++.+|.|.++.+.|....
T Consensus 679 ~V~E~G~h~eLl~~~~gly~~Lv~~q~~~~ 708 (716)
T KOG0058|consen 679 RVVEMGTHDELLSKPNGLYAKLVQRQLDSG 708 (716)
T ss_pred eEEecccHHHHhhCcccHHHHHHHHhcccC
Confidence 999999999999987799999998876544
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-100 Score=941.52 Aligned_cols=578 Identities=42% Similarity=0.696 Sum_probs=541.6
Q ss_pred ccchHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHH
Q 000909 6 NKNNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLA 85 (1230)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 85 (1230)
.+.++.+++++.+| .|.+++++++++++.|+..|++.++++.+++.+... +.+........+++++++++++
T Consensus 648 ~~~s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~-------~~~~~~~~~~~~al~f~~l~~~ 719 (1228)
T KOG0055|consen 648 EKVSFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPP-------DDDELKREVRAWALIFLGLGIV 719 (1228)
T ss_pred ccccHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC-------ChHHHHHHHHHHHHHHHHHHHH
Confidence 34579999999988 577889999999999999999999999999988643 1111222233477888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHH
Q 000909 86 VMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFI 165 (1230)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i 165 (1230)
..+..+++++++...++++..++|...|+++++++.+|||+..++ |.+.+|+.+|...++..+.+.+..+++++..++
T Consensus 720 ~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns--g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~ 797 (1228)
T KOG0055|consen 720 SGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS--GALSSRLATDASNVRAAVGDRLSLVVQNIAAVI 797 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc--hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999985444 599999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHH
Q 000909 166 SGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAIL 245 (1230)
Q Consensus 166 ~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~ 245 (1230)
+++++.|+++|+++++++++.|++++..+...+.+.....+..+..++...+..|++++||||++|+.|+++.+.|.+..
T Consensus 798 ~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l 877 (1228)
T KOG0055|consen 798 IGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEEL 877 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 246 DSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIA 324 (1230)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s 324 (1230)
++..+...+.+.+.++.+++. .+.++.+++.+|+|++++..|.+++.+++-+++.+.+....+++.....+.+.++..|
T Consensus 878 ~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~A 957 (1228)
T KOG0055|consen 878 EKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIA 957 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHH
Confidence 999999999999999999988 8889999999999999999999999999999988888888899999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHh
Q 000909 325 ASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQ 404 (1230)
Q Consensus 325 ~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~ 404 (1230)
+.+++++++++|.++..++.+...++.+|+|+|+||+|+||.+|+.++|+|+||+|++||++||||||||||||++.+|.
T Consensus 958 a~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLe 1037 (1228)
T KOG0055|consen 958 AGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLE 1037 (1228)
T ss_pred HHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHH
Confidence 99999999999877655433334566789999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCccc
Q 000909 405 RFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYE 484 (1230)
Q Consensus 405 ~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~ 484 (1230)
|+|+|++|.|.|||+|+++++++++|++||.|+|||.||++||||||+||..+++.+|+.+||+.+++|+||.+||+|||
T Consensus 1038 RfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyD 1117 (1228)
T KOG0055|consen 1038 RFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYD 1117 (1228)
T ss_pred HhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCccc
Confidence 99999999999999999999999999999999999999999999999999656899999999999999999999999999
Q ss_pred chhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEE
Q 000909 485 TKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVV 564 (1230)
Q Consensus 485 t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l 564 (1230)
|.+||+|.+||||||||||||||++|||+||||||+|||||.++|+.+|++|++...|||+|+|||||+++++||.|.|+
T Consensus 1118 T~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi 1197 (1228)
T KOG0055|consen 1118 TRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVL 1197 (1228)
T ss_pred CccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEEEecChhHHHhhcCcHHHHHHHHhh
Q 000909 565 DNGCLVEIGTHNDLINRIDGHYAKMAKLQR 594 (1230)
Q Consensus 565 ~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 594 (1230)
+||+|+|+|+|++|++ .+|.|.++++.|.
T Consensus 1198 ~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1198 KNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred ECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 9999999999999999 5999999998765
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4e-94 Score=878.73 Aligned_cols=560 Identities=29% Similarity=0.476 Sum_probs=509.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 658 APEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLT 737 (1230)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (1230)
.++|+.+.-.++.+++........+++...+++..... ...+........+++.+++..++.+++.+++.+.+.++.
T Consensus 150 ~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~---~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld 226 (709)
T COG2274 150 FKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPD---ASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLD 226 (709)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444444444444444444445555555544422 123344555666777788899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 738 KRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQ 817 (1230)
Q Consensus 738 ~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~ 817 (1230)
.++-.++|+|++++|++||. .+++|++++|+ +|.+.++.++.......+..+..+++.++++++++|.+++++++.+
T Consensus 227 ~~l~~~~~~hll~Lpl~~f~--~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~ 303 (709)
T COG2274 227 LELSGRFFRHLLRLPLSYFE--KRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAI 303 (709)
T ss_pred HHHHHHHHHHHHcCcHHHcc--CCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999997 78999999998 6899999999888888888888888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 818 PLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSA 897 (1230)
Q Consensus 818 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (1230)
|+.++..++..+.+++..++..+..++.++...|++.|++|+|+.+.|.++..+|++...+..+...+..........+.
T Consensus 304 ~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (709)
T COG2274 304 PLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIK 383 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCC
Q 000909 898 QCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAG 977 (1230)
Q Consensus 898 ~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~ 977 (1230)
.++..+..++++|+|+.++..|.+|.|+++++.++...+..|+..+...+.++.+...+.+|+.++++.++|.+..
T Consensus 384 ~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~---- 459 (709)
T COG2274 384 SLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGD---- 459 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998875432
Q ss_pred CCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCee
Q 000909 978 DGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMD 1057 (1230)
Q Consensus 978 ~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~d 1057 (1230)
......++..|+|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++||+|
T Consensus 460 --~~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~d 536 (709)
T COG2274 460 --KTLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVD 536 (709)
T ss_pred --cccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEe
Confidence 1123445678999999999999765 3479999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1058 VRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1058 i~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
+.+++++.||++|+|||||++||+|||||||++++|++++|++++||+.+++|+||.++|.||||+|||+|.+|||||||
T Consensus 537 l~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQ 616 (709)
T COG2274 537 LNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQ 616 (709)
T ss_pred HHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhh
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
||+||||+++||+||||||||||||++||+.|.+.|.+..++||+|+||||+++++.||||+|||+|+|+|+|+|+||++
T Consensus 617 rlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 617 RLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred HHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccHHHhhhcC
Q 000909 1218 MRGAFFNLATLQS 1230 (1230)
Q Consensus 1218 ~~g~y~~l~~~q~ 1230 (1230)
.+|.|+++|+.|.
T Consensus 697 ~~g~y~~l~~~q~ 709 (709)
T COG2274 697 QGGLYARLYQQQE 709 (709)
T ss_pred hcChHHHHHhccC
Confidence 9999999999884
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.3e-91 Score=854.37 Aligned_cols=567 Identities=31% Similarity=0.484 Sum_probs=513.8
Q ss_pred hHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 000909 9 NIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMV 88 (1230)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 88 (1230)
.+.++++.+.++++.+ +-.++.+++..++....|++.+.++|.+.... + .+.+....+.++..++...+
T Consensus 141 ~~~~f~~~~~~~~~~l-~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~------~----~~tL~vl~ig~~~~~l~~~~ 209 (709)
T COG2274 141 GLSWFIPLLFKYRRLL-FEVLLASLLLQLLALATPLFSQIVIDKVLPDA------S----RSTLTVLAIGLLLAALFEAL 209 (709)
T ss_pred chHhHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC------c----hhHHHHHHHHHHHHHHHHHH
Confidence 5667777776665543 22333333333333444477889999876431 1 23455556666777788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 000909 89 VAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGL 168 (1230)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~ 168 (1230)
+.+++.++..+.+.++..++-.++|+|++++|++||++ .++| |+++|+. |.+.|+++++..+...+.++.+.++.+
T Consensus 210 l~~lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~-r~~G--e~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l 285 (709)
T COG2274 210 LRLLRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEK-RSVG--EIISRVR-ELEQIREFLTGSILTLIIDLLFALIFL 285 (709)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccC-CChh--hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997 4667 9999997 999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHH
Q 000909 169 AFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDST 248 (1230)
Q Consensus 169 ~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~ 248 (1230)
++|++++|.|++++++.+|+++++..++.+..++..++..+..++.++.+.|+++|+++||+.+.|.++..+|++...+.
T Consensus 286 ~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~ 365 (709)
T COG2274 286 AVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQ 365 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 249 TKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASR 327 (1230)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~r 327 (1230)
.+...+..+.......+. ++..+..++++|+|+++++.|.+|+|.++++.+....+..|+..+...+..+++...+.+|
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~r 445 (709)
T COG2274 366 VNIGFKTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALER 445 (709)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887777666 6777788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC
Q 000909 328 IFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFY 407 (1230)
Q Consensus 328 i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~ 407 (1230)
+.++++.++|.+.... ....++..|+|+|+||+|+|+.+ ++++|+|+||+|+|||++||||+||||||||+|+|.|+|
T Consensus 446 L~dil~~~~E~~~~~~-~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly 523 (709)
T COG2274 446 LGDILDTPPEQEGDKT-LIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLY 523 (709)
T ss_pred HHHHhcCCcccccccc-cccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 9999998877543221 23445677999999999999864 347999999999999999999999999999999999999
Q ss_pred CCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchh
Q 000909 408 DADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKV 487 (1230)
Q Consensus 408 ~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~ 487 (1230)
+|++|+|++||.|++++++.++|++||||+||+.||+|||+|||++++|+.++|++++||+.+++|+||+++|.||+|.+
T Consensus 524 ~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v 603 (709)
T COG2274 524 KPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPV 603 (709)
T ss_pred CCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCC
Q 000909 488 GERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNG 567 (1230)
Q Consensus 488 ~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G 567 (1230)
||+|.+||||||||++||||+++||+||||||||||||+++|+.|.+.+.+...|+|+|+||||++++++||||+|||+|
T Consensus 604 ~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~G 683 (709)
T COG2274 604 GEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQG 683 (709)
T ss_pred ccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecChhHHHhhcCcHHHHHHHHh
Q 000909 568 CLVEIGTHNDLINRIDGHYAKMAKLQ 593 (1230)
Q Consensus 568 ~i~~~g~~~~l~~~~~~~~~~~~~~~ 593 (1230)
+|+++|+|+|+++. +|.|.+++..|
T Consensus 684 kiv~~gs~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 684 KIVEQGSHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred ceeccCCHHHHHHh-cChHHHHHhcc
Confidence 99999999999996 99999998765
No 14
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.8e-88 Score=838.60 Aligned_cols=553 Identities=35% Similarity=0.569 Sum_probs=495.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 660 EWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKR 739 (1230)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1230)
.+ ...++.++..+........+++++..++... ........+...++++.++..++.++..+...+.+.+...+
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 86 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALL-----ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVAD 86 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 5555666666666666666777777776655 11122334445555566677788888888888888999999
Q ss_pred HHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 740 IRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPL 819 (1230)
Q Consensus 740 l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~ 819 (1230)
+|.+++++++++|++||+ .+++|++++|+++|++.++..+......+...+..+++.+++++..+|.+++++++..|+
T Consensus 87 lr~~~~~~l~~~~~~~~~--~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~ 164 (567)
T COG1132 87 LRRDLFEKLLRLPLSFFD--KAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPL 164 (567)
T ss_pred HHHHHHHHHHhCCHHHhC--cCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999998 678999999999999999999988866666678888999999999999999999999888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 820 TILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQC 899 (1230)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1230)
+.+...+..+......+..++..++..+.+.|.+.|++++|+|+.++...+++++..+...+...+..+..+...++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (567)
T COG1132 165 LALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLL 244 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777765577778888888899999999999999999999999999999999998888888878888888888899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCC
Q 000909 900 LTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDG 979 (1230)
Q Consensus 900 ~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~ 979 (1230)
+..+..++++++|+.++..+.+++|.+.+++.+......++..+......+..+..+++|++++++.+++..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~----- 319 (567)
T COG1132 245 LSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPP----- 319 (567)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999866533220
Q ss_pred CCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecC
Q 000909 980 TRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVR 1059 (1230)
Q Consensus 980 ~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~ 1059 (1230)
.+.....|+|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+
T Consensus 320 ---~~~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~ 394 (567)
T COG1132 320 ---DPLKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIR 394 (567)
T ss_pred ---CCCCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehh
Confidence 012335578999999999973 457999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1060 ELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1060 ~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
++++++||++|++|||||+||+|||+|||++|+|+++|||+++|++.++++|||+++|+||||.|||+|.+|||||||||
T Consensus 395 ~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrl 474 (567)
T COG1132 395 DISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRL 474 (567)
T ss_pred hcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
|||||++++|||||||||||+||++||+.|++++++..++||+|+||||++|+++||+|+|||+|+|+|+|+|+||++++
T Consensus 475 aiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~ 554 (567)
T COG1132 475 AIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKG 554 (567)
T ss_pred HHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcC
Confidence 99999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred cccHHHhhhcC
Q 000909 1220 GAFFNLATLQS 1230 (1230)
Q Consensus 1220 g~y~~l~~~q~ 1230 (1230)
|.|++||+.|.
T Consensus 555 g~y~~l~~~~~ 565 (567)
T COG1132 555 GLYARLYQAQG 565 (567)
T ss_pred CHHHHHHHHhh
Confidence 99999999873
No 15
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.4e-87 Score=831.72 Aligned_cols=567 Identities=22% Similarity=0.345 Sum_probs=485.3
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 650 FFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNF 729 (1230)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1230)
+++++++.+++++.+.+++++.++.....+..++.++.+++........ ......+...++++.++..++.+++.++.
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP--REALLPPFILLILLFVLRALLAWLRERVG 87 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677788888888888888888888888888888888765421111 11223344445556667778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 730 AYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKL 809 (1230)
Q Consensus 730 ~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 809 (1230)
...+.++..++|.++|++++++|+.||+ ++++|++++|+++|++.++..+...+..++..++.+++++++++.++|.+
T Consensus 88 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 165 (588)
T PRK11174 88 FKAGQHIRQQIRQQVLDKLQQLGPAWIQ--GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAA 165 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhc--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 67899999999999999999999999999888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 810 AVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWL 889 (1230)
Q Consensus 810 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1230)
++++++++|+.++......+..+...++..+..++..+.+.|.++|+++||+|++|+.+.++|++..++..+...+..+.
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (588)
T PRK11174 166 GLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRM 245 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887777777777777777788888899999999999999999999999999999999888887777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 890 AGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDV---------FKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASV 960 (1230)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri 960 (1230)
.....++...+..+...++.++++..+ .|.+++|.+ +.+..+...+..++..+...+.++.++..+.+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri 324 (588)
T PRK11174 246 AFLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESL 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666665555555555555555544 377777754 1112333445678888899999999999999999
Q ss_pred HHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHH
Q 000909 961 FKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLI 1040 (1230)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL 1040 (1230)
.++++.+++.+.. +. ...+.+..++|+|+||+|.|++ ++++|+|+||+|+|||++|||||||||||||+++|
T Consensus 325 ~~~l~~~~~~~~~-----~~-~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL 396 (588)
T PRK11174 325 VTFLETPLAHPQQ-----GE-KELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNAL 396 (588)
T ss_pred HHHHcCCCcccCC-----Cc-cccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 9999876532211 00 0011112457999999998863 35699999999999999999999999999999999
Q ss_pred hccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccc
Q 000909 1041 QRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGY 1120 (1230)
Q Consensus 1041 ~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gl 1120 (1230)
+|+| |++|+|++||+|+++++.+++|++|+||||||+||+|||||||.+|+|+++|||+++|++.|++++||+++|+||
T Consensus 397 ~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~ 475 (588)
T PRK11174 397 LGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGL 475 (588)
T ss_pred hcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccc
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEE
Q 000909 1121 ETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIAL 1200 (1230)
Q Consensus 1121 dt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~v 1200 (1230)
||.|||+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++..||+|+|
T Consensus 476 dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iiv 555 (588)
T PRK11174 476 DTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWV 555 (588)
T ss_pred ccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred EeCcEEEEecCHhHHhhcccccHHHhhhcC
Q 000909 1201 VADGRVVERGTYAQLTHMRGAFFNLATLQS 1230 (1230)
Q Consensus 1201 l~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~ 1230 (1230)
|++|+|+|.|+|+||++++|.|+++++.|.
T Consensus 556 l~~G~i~e~G~~~eL~~~~~~y~~l~~~q~ 585 (588)
T PRK11174 556 MQDGQIVQQGDYAELSQAGGLFATLLAHRQ 585 (588)
T ss_pred EeCCeEeecCCHHHHHhcchHHHHHHHHhh
Confidence 999999999999999999999999998873
No 16
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-86 Score=830.30 Aligned_cols=576 Identities=20% Similarity=0.242 Sum_probs=488.8
Q ss_pred CccccccchHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHH
Q 000909 1 MRREKNKNNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFV 80 (1230)
Q Consensus 1 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1230)
|.+++.+..++++++|++++++. ++++++++++..++.+..|+++++++|.+.... .+. ..+..+...++
T Consensus 1 ~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-----~~~----~~~~~~~~~~~ 70 (588)
T PRK11174 1 MDKSRQKELTRWLKQQSKPAKRW-LNLSILLGFLSGLLLIAQAWLLATILQALIIEN-----IPR----EALLPPFILLI 70 (588)
T ss_pred CCccccchhhHHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----Cch----hHHHHHHHHHH
Confidence 77777788888999999887654 566777777777777788889999999753210 011 12223333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHH
Q 000909 81 YLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMN 160 (1230)
Q Consensus 81 ~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~ 160 (1230)
++.++..++.++..++..+.+.++..++|.++|+|++++|+++|++ .++| ++++|+++|++.+++++.+.++.++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~-~~~g--~l~s~~~~dv~~i~~~~~~~~~~~~~~ 147 (588)
T PRK11174 71 LLFVLRALLAWLRERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQG-KPAG--SWATLVLEQVEDMHDFYARYLPQMALA 147 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhcc-CCHH--HHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 5556677888899999999999999999999999999999999996 5556 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHH
Q 000909 161 ASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDR 240 (1230)
Q Consensus 161 ~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 240 (1230)
++.+++.++++++++|.+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++
T Consensus 148 ~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~ 227 (588)
T PRK11174 148 VLVPLLILIAVFPINWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETES 227 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHH
Confidence 99999999999999999999999999998888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHH---------HHHHHHHHHHHHHHHH
Q 000909 241 YEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKI---------YAAGISFILSGLSLGS 310 (1230)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~---------~~~~~~~~~~~~~l~~ 310 (1230)
|++..++..+...+..+......+.. .+..+..+++.+++++.+ .|.+++|.+ +++..+......|+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~ 306 (588)
T PRK11174 228 IRSASEDFRQRTMEVLRMAFLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRD 306 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHH
Confidence 99999998888777666655544443 223333333334444443 377777754 1222334445678888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEc
Q 000909 311 ALPELKYFTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVG 390 (1230)
Q Consensus 311 ~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG 390 (1230)
+...+..++++..+.+|+.++++.+++.+... ....+....++|+|+||+|.|++ ++++|+|+||+|+|||++||||
T Consensus 307 l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG 383 (588)
T PRK11174 307 LGTFYHAKAQAVGAAESLVTFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVG 383 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEEC
Confidence 88889999999999999999998654322111 11111112357999999988763 3569999999999999999999
Q ss_pred CCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHH
Q 000909 391 ASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAA 470 (1230)
Q Consensus 391 ~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~ 470 (1230)
|||||||||+++|+|+| |++|+|.+||+|+++++.+++|++|+||+|||+||++||+|||++|+|++++++++++|+.+
T Consensus 384 ~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a 462 (588)
T PRK11174 384 PSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENA 462 (588)
T ss_pred CCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHh
Confidence 99999999999999999 99999999999999999999999999999999999999999999999899999999999999
Q ss_pred hHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEec
Q 000909 471 NAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAH 550 (1230)
Q Consensus 471 ~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH 550 (1230)
+++++++++|+|+||.+||+|.+|||||||||+||||+++||+|||||||||+||+++++.+++.+++..+++|+|+|||
T Consensus 463 ~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItH 542 (588)
T PRK11174 463 WVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTH 542 (588)
T ss_pred CHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred CchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHHhhc
Q 000909 551 KLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQRQ 595 (1230)
Q Consensus 551 ~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 595 (1230)
|++++++||+|++|++|+++|+|+|+||+++ ++.|++++..|.+
T Consensus 543 rl~~i~~aD~Iivl~~G~i~e~G~~~eL~~~-~~~y~~l~~~q~~ 586 (588)
T PRK11174 543 QLEDLAQWDQIWVMQDGQIVQQGDYAELSQA-GGLFATLLAHRQE 586 (588)
T ss_pred ChHHHHhCCEEEEEeCCeEeecCCHHHHHhc-chHHHHHHHHhhc
Confidence 9999999999999999999999999999985 8899999987653
No 17
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.7e-86 Score=837.49 Aligned_cols=564 Identities=33% Similarity=0.522 Sum_probs=503.3
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 649 SFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYN 728 (1230)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1230)
.+++++++.++.++.+...+++..+........+++.+.+++....... ..........++++.++..++.+++.++
T Consensus 148 ~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 224 (711)
T TIGR00958 148 LLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG---PPALASAIFFMCLLSIASSVSAGLRGGS 224 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777888888888777777777777777888888888876653211 1112223334455566677888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 729 FAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWK 808 (1230)
Q Consensus 729 ~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 808 (1230)
+.+.+.++..++|.++|++++++|+.||+ ++++|++++|+++|++.++..+...+..++..+..+++++++++.++|.
T Consensus 225 ~~~~~~~~~~~lr~~l~~~ll~~~~~~f~--~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~ 302 (711)
T TIGR00958 225 FNYTMARINLRIREDLFRSLLRQDLGFFD--ENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPR 302 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999998 6789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 809 LAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSW 888 (1230)
Q Consensus 809 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (1230)
+++++++..|+.++...+..+......++.++..++..+.+.|.+.|+++||+|+.|+.+.++|++..++..+...+...
T Consensus 303 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 382 (711)
T TIGR00958 303 LTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKAL 382 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888878887888888888899999999999999999999999999999999998888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000909 889 LAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQS 968 (1230)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~ 968 (1230)
...........+..+..++++++|++++..|.++.|.++++..+......++..+...+.++.++..+.+|++++++.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 462 (711)
T TIGR00958 383 AYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKP 462 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 76666667777777778888999999999999999999999999999999999999999999999999999999998766
Q ss_pred CCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCC
Q 000909 969 LIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ 1048 (1230)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~ 1048 (1230)
+.+.. . ...+++..|.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++
T Consensus 463 ~~~~~-----~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~ 535 (711)
T TIGR00958 463 NIPLT-----G--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTG 535 (711)
T ss_pred CCCCC-----C--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCC
Confidence 53321 0 1112234678999999999987666689999999999999999999999999999999999999999
Q ss_pred CeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCC
Q 000909 1049 GSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERG 1128 (1230)
Q Consensus 1049 G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G 1128 (1230)
|+|++||+|+++++.+++|++|+||||||++|+|||||||.+|+++.+||++++|++.++++++++++|+||||.+||+|
T Consensus 536 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 536 GQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred CEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEE
Q 000909 1129 VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVE 1208 (1230)
Q Consensus 1129 ~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive 1208 (1230)
.+||||||||||||||++++|+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive 693 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVE 693 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999 33457999999999999999999999999999999
Q ss_pred ecCHhHHhhcccccHHHh
Q 000909 1209 RGTYAQLTHMRGAFFNLA 1226 (1230)
Q Consensus 1209 ~Gt~~eLl~~~g~y~~l~ 1226 (1230)
.|+|+||++++|.|++|+
T Consensus 694 ~Gt~~eL~~~~~~y~~lv 711 (711)
T TIGR00958 694 MGTHKQLMEDQGCYKHLV 711 (711)
T ss_pred eeCHHHHHhCCCchHhcC
Confidence 999999999999999874
No 18
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.1e-84 Score=824.60 Aligned_cols=562 Identities=27% Similarity=0.354 Sum_probs=493.7
Q ss_pred HHHHHhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 650 FFRLLSL-NAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYN 728 (1230)
Q Consensus 650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1230)
++++++. .++.++.+...++++++........++.+..+++...... .......+.+.++++.++..++.+++.++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 199 (686)
T TIGR03797 123 LRDLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA---DRSLLVQIALALLAAAVGAAAFQLAQSLA 199 (686)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344443 3445555555555566666666666677777776554221 11223344555666667778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 729 FAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWK 808 (1230)
Q Consensus 729 ~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 808 (1230)
....+.++..++|.++|++++++|+.||+ ++++|++++|++ |++.+++.+...+...+.....+++++++++.++|.
T Consensus 200 ~~~~~~~~~~~l~~~~~~~ll~~~~~~~~--~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (686)
T TIGR03797 200 VLRLETRMDASLQAAVWDRLLRLPVSFFR--QYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWK 276 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHC--CCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997 788999999997 799999988877777676666677788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 809 LAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSW 888 (1230)
Q Consensus 809 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (1230)
++++++++.|+.+++.++..+......++..+..++..+.+.|.+.|+++||++|.|+++.++|++..++..+...+...
T Consensus 277 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 356 (686)
T TIGR03797 277 LALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQR 356 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888887777777777788888888889999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000909 889 LAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQS 968 (1230)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~ 968 (1230)
.......+...+..+..++++|+|++++..|.+|.|.++++..+...+..++..+...+.++.++..+.+|+.++++.++
T Consensus 357 ~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 436 (686)
T TIGR03797 357 IENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALP 436 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 88888888888888889999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCC
Q 000909 969 LIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ 1048 (1230)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~ 1048 (1230)
+.+.. . ..+.+..|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++
T Consensus 437 e~~~~------~--~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~ 507 (686)
T TIGR03797 437 EVDEA------K--TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPES 507 (686)
T ss_pred ccccC------c--CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 43211 0 1112245789999999999743 4579999999999999999999999999999999999999999
Q ss_pred CeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCC
Q 000909 1049 GSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERG 1128 (1230)
Q Consensus 1049 G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G 1128 (1230)
|+|++||+|+++++.+++|++|+||||||++|+|||||||.+++| ++++++++|++.++++++++++|+||||++||+|
T Consensus 508 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G 586 (686)
T TIGR03797 508 GSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGG 586 (686)
T ss_pred CEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 999999999999999999999999999999999999999999988 9999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEE
Q 000909 1129 VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVE 1208 (1230)
Q Consensus 1129 ~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive 1208 (1230)
.+|||||||||+||||++++|+|||||||||+||++||+.+++.|++. ++|+|+||||+++++.||+|+||++|+|+|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~ 664 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQ 664 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999999886 789999999999999999999999999999
Q ss_pred ecCHhHHhhcccccHHHhhhc
Q 000909 1209 RGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1209 ~Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
.|+|+||++++|.|++|++.|
T Consensus 665 ~G~~~~Ll~~~~~y~~l~~~q 685 (686)
T TIGR03797 665 QGTYDELMAREGLFAQLARRQ 685 (686)
T ss_pred ECCHHHHHhCCcHHHHHHHhc
Confidence 999999999999999999877
No 19
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.4e-84 Score=806.71 Aligned_cols=561 Identities=36% Similarity=0.549 Sum_probs=498.2
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 000909 10 IGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVV 89 (1230)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 89 (1230)
+++++++.+ .+ .+++++++.++..+.....|++++.++|.+... ......+..+++++.++..++
T Consensus 4 ~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~~~~~~~~~~~v~ 68 (567)
T COG1132 4 LRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD------------LGELLELLLLLLLLALLGGVL 68 (567)
T ss_pred HHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh------------HHHHHHHHHHHHHHHHHHHHH
Confidence 445555554 34 555666666666667777778888899876411 122333444455555567778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000909 90 AFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLA 169 (1230)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~ 169 (1230)
.++..++..+.+.++..++|.+++++++++|+++|++ .++| ++++|+++|++.++..+.+....+...+.++++.++
T Consensus 69 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~-~~~g--~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (567)
T COG1132 69 RALQSYLGSRLGQKIVADLRRDLFEKLLRLPLSFFDK-AKSG--DLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLV 145 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCc-CCcc--hHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 8888888888889999999999999999999999997 5666 999999999999999999886666667888999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHH
Q 000909 170 FSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTT 249 (1230)
Q Consensus 170 ~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~ 249 (1230)
+++..+|.+++++++..|++.+...++.++.++..++.++..++.++.+.|.++|+++||+|+.++...+++++..++..
T Consensus 146 ~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~ 225 (567)
T COG1132 146 LLFSLSWRLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELR 225 (567)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888888889999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 250 KLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRI 328 (1230)
Q Consensus 250 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri 328 (1230)
+...+.....+...+.. .+......+++++|++.+..+.+++|.+++++.+......|+..+...+..++.+..+.+|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri 305 (567)
T COG1132 226 RANLRASRLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERL 305 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777777776655 66667778888999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 000909 329 FDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD 408 (1230)
Q Consensus 329 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 408 (1230)
+++++.+++..+.+.. .....++|+|+||+|+|++ ++++|+|+||+++|||++||||||||||||++++|+|+|+
T Consensus 306 ~~~l~~~~~~~~~~~~---~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~ 380 (567)
T COG1132 306 FELLDEEPEVEDPPDP---LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD 380 (567)
T ss_pred HHHHcCCccccCCCCC---CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC
Confidence 9999986654332211 2334578999999999974 3569999999999999999999999999999999999999
Q ss_pred CCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhc
Q 000909 409 ADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVG 488 (1230)
Q Consensus 409 ~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 488 (1230)
|++|+|++||+|+++++.+++|++|++|||||+||++||+|||.+|++++++++++++|+.++++|+++++|+||||.+|
T Consensus 381 ~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vg 460 (567)
T COG1132 381 PTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVG 460 (567)
T ss_pred CCCCeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCe
Q 000909 489 ERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGC 568 (1230)
Q Consensus 489 ~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~ 568 (1230)
|+|.+||||||||++||||+++||+|||||||||+||++||+.+++.+.+..++||+|+||||++++++||+|+|||+|+
T Consensus 461 e~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~ 540 (567)
T COG1132 461 ERGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGR 540 (567)
T ss_pred CCCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred EEEecChhHHHhhcCcHHHHHHHHhh
Q 000909 569 LVEIGTHNDLINRIDGHYAKMAKLQR 594 (1230)
Q Consensus 569 i~~~g~~~~l~~~~~~~~~~~~~~~~ 594 (1230)
|+|.|+|+||+++ +|.|++++..|.
T Consensus 541 i~e~G~h~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 541 IVERGTHEELLAK-GGLYARLYQAQG 565 (567)
T ss_pred EEEecCHHHHHHc-CCHHHHHHHHhh
Confidence 9999999999996 999999998765
No 20
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=5.6e-85 Score=866.23 Aligned_cols=571 Identities=30% Similarity=0.465 Sum_probs=486.7
Q ss_pred hHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 000909 9 NIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMV 88 (1230)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 88 (1230)
.+.+++++++++++. ++++++++++.+++.|+++++++.+++.+... .........+.+++++++++..+
T Consensus 812 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~l~~~~~~i~~~~ 881 (1466)
T PTZ00265 812 NLRIVYREIFSYKKD-VTIIALSILVAGGLYPVFALLYAKYVSTLFDF---------ANLEANSNKYSLYILVIAIAMFI 881 (1466)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667777665543 67788888899999999999999999976421 00112234456667777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 000909 89 VAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGL 168 (1230)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~ 168 (1230)
+.++..++..++++++..++|.++|++++++|++||++ ...++|++++|+++|++.+++++...+..++..++++++++
T Consensus 882 ~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~-~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~ 960 (1466)
T PTZ00265 882 SETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQ-DKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSM 960 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999985 22344599999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHccHHHHHH
Q 000909 169 AFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLS-KK-----------------AYKEYGKANAIVEQALSSIKTVYS 230 (1230)
Q Consensus 169 ~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~e~l~gi~~ik~ 230 (1230)
+++++++|.++++++++++++ ...+.++.+... ++ ..+..++.+..++|.++|+++||+
T Consensus 961 ~~~~~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka 1037 (1466)
T PTZ00265 961 VMSFYFCPIVAAVLTGTYFIF---MRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVII 1037 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHH
Confidence 999999999887765444333 333333332211 11 123356778899999999999999
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHH
Q 000909 231 FSAERRIIDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLG 309 (1230)
Q Consensus 231 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~ 309 (1230)
|+.|+.+.++|++..+...+...+.....++..++. .+..+..++++|+|++++..|.+++|++++++.++.....++.
T Consensus 1038 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~ 1117 (1466)
T PTZ00265 1038 YGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAG 1117 (1466)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888888877777766 5566677889999999999999999999998877666556677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcc---cCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEE
Q 000909 310 SALPELKYFTEASIAASRIFDRIDRVPEIDGEDTKGLV---LDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSV 386 (1230)
Q Consensus 310 ~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~ 386 (1230)
.+...+..++++.++++|++++++.+++.+..+..... ++...+.|+|+||+|+||++++.++|+|+||+|+||+++
T Consensus 1118 ~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~v 1197 (1466)
T PTZ00265 1118 KLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTT 1197 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEE
Confidence 88888999999999999999999876543221111111 123457899999999998765567999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhcCCCC------------------------------------------------------CCc
Q 000909 387 ALVGASGSGKSTAIALVQRFYDA------------------------------------------------------DDG 412 (1230)
Q Consensus 387 ~ivG~sGsGKSTl~~ll~~~~~~------------------------------------------------------~~G 412 (1230)
|||||||||||||+++|+|+|+| ++|
T Consensus 1198 AIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 1277 (1466)
T PTZ00265 1198 AIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSG 1277 (1466)
T ss_pred EEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCC
Confidence 99999999999999999999999 699
Q ss_pred eEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCC
Q 000909 413 IVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGA 492 (1230)
Q Consensus 413 ~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 492 (1230)
+|++||+|+++++.+++|++||||+|||+||++||+|||.+|.++++++++++||+.+++++||.+||+||||.+||+|.
T Consensus 1278 ~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~ 1357 (1466)
T PTZ00265 1278 KILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGK 1357 (1466)
T ss_pred eEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeC----
Q 000909 493 LLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDN---- 566 (1230)
Q Consensus 493 ~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~---- 566 (1230)
+|||||||||||||||+++|+||||||||||||+++|+.|+++|.+.. +++|+|+||||++++++||+|+||++
T Consensus 1358 ~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~ 1437 (1466)
T PTZ00265 1358 SLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRT 1437 (1466)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999873 69999999999999999999999999
Q ss_pred CeEE-EecChhHHHhhcCcHHHHHHHHh
Q 000909 567 GCLV-EIGTHNDLINRIDGHYAKMAKLQ 593 (1230)
Q Consensus 567 G~i~-~~g~~~~l~~~~~~~~~~~~~~~ 593 (1230)
|+++ |+|+|+||+++.+|.|+++++.|
T Consensus 1438 G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1438 GSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred CCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 9955 89999999974489999998765
No 21
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3e-84 Score=823.43 Aligned_cols=563 Identities=22% Similarity=0.349 Sum_probs=496.3
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 650 FFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNF 729 (1230)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1230)
+++++.+.++.++.+...++++++........++++..+++....... ......+...++++.++..++.+++.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555566666666666666666666667777788887776553211 12233344445555667778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 730 AYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKL 809 (1230)
Q Consensus 730 ~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 809 (1230)
...+.++..++|.++|++++++|+.||+ ++++|++++|++ |.+.+.+.+...+...+..+..+++.+++++.++|.+
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~--~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 297 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFS--TRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL 297 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999999998 688999999998 8999998887777777777777777778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 810 AVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWL 889 (1230)
Q Consensus 810 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1230)
++++++++|+.+++.++..+..++..++..+..++..+.+.|++.|+++||++|.|+.+.++|++...+..+...+..+.
T Consensus 298 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 377 (708)
T TIGR01193 298 FLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKA 377 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888888888888999999999999999999999999999999999888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 000909 890 AGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSL 969 (1230)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~ 969 (1230)
......+...+..+..++++|+|++++..|.+|+|.++++..+...+..|+..+...+.++..+..+++|+.++++.+++
T Consensus 378 ~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 457 (708)
T TIGR01193 378 DQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSE 457 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 77777777777788888999999999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCC
Q 000909 970 IPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQG 1049 (1230)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G 1049 (1230)
.+... .....++..|+|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|
T Consensus 458 ~~~~~------~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G 529 (708)
T TIGR01193 458 FINKK------KRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSG 529 (708)
T ss_pred ccccc------cccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCc
Confidence 43210 00112334678999999999973 34799999999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccC-CCCCCHHHHHHHHHHhchHHHHHhccccccccccCCC
Q 000909 1050 SVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFG-KLDASENEVVEAARAANAHEFISSLKDGYETECGERG 1128 (1230)
Q Consensus 1050 ~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g-~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G 1128 (1230)
+|++||+|+++++.+++|++|+||||||+||+|||||||.++ +|+++++++++|++.++++++++++|+||||.+||+|
T Consensus 530 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G 609 (708)
T TIGR01193 530 EILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEG 609 (708)
T ss_pred EEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCC
Confidence 999999999999999999999999999999999999999998 5789999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEE
Q 000909 1129 VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVE 1208 (1230)
Q Consensus 1129 ~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive 1208 (1230)
.+|||||||||+||||++++|+|||||||||+||++||+.+++.|++. +++|+|+||||+++++.||+|+||++|+++|
T Consensus 610 ~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~ 688 (708)
T TIGR01193 610 SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIE 688 (708)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999999974 7899999999999999999999999999999
Q ss_pred ecCHhHHhhcccccHHHhh
Q 000909 1209 RGTYAQLTHMRGAFFNLAT 1227 (1230)
Q Consensus 1209 ~Gt~~eLl~~~g~y~~l~~ 1227 (1230)
.|+|+||++++|.|++|++
T Consensus 689 ~G~~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 689 QGSHDELLDRNGFYASLIH 707 (708)
T ss_pred ECCHHHHHhcCCcHHHHhh
Confidence 9999999999999999986
No 22
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.2e-84 Score=816.00 Aligned_cols=563 Identities=35% Similarity=0.541 Sum_probs=493.1
Q ss_pred chHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHH
Q 000909 8 NNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVM 87 (1230)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (1230)
..+++++++.++.++ .+++++++.++..+.....|++++.++|.+.... +. .......++++++.++..
T Consensus 147 ~~~~~l~~~~~~~~~-~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~------~~----~~~~~~~~~~~~~~~~~~ 215 (711)
T TIGR00958 147 DLLFRLLGLSGRDWP-WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDK------GP----PALASAIFFMCLLSIASS 215 (711)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CH----HHHHHHHHHHHHHHHHHH
Confidence 357788888876544 4556666667777777777889999999775321 11 122222333444555667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000909 88 VVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISG 167 (1230)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~ 167 (1230)
++.+++.++..+.+.++..++|.++|++++++|+++|++ .++| ++++|+++|++.+++.+...+..++.+++.+++.
T Consensus 216 ~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~-~~~G--~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~ 292 (711)
T TIGR00958 216 VSAGLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDE-NKTG--ELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGL 292 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC-CCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888889999999999999999999999999999996 5666 9999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHH
Q 000909 168 LAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDS 247 (1230)
Q Consensus 168 ~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~ 247 (1230)
+++++.++|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++
T Consensus 293 ~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~ 372 (711)
T TIGR00958 293 LGFMLWLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEE 372 (711)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHH
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 248 TTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAAS 326 (1230)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ 326 (1230)
..+...+.....+...... .+.....++++++|++++..|.+++|.++++..+......|+..+...+..++++..+.+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ 452 (711)
T TIGR00958 373 TLQLNKRKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASE 452 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777766655544433 444455667778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcC
Q 000909 327 RIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRF 406 (1230)
Q Consensus 327 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 406 (1230)
|++++++.+++.+... ...+.+..+.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+
T Consensus 453 ri~~~l~~~~~~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl 530 (711)
T TIGR00958 453 KVFEYLDRKPNIPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNL 530 (711)
T ss_pred HHHHHhCCCCCCCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhc
Confidence 9999998765533221 11222345689999999999865556799999999999999999999999999999999999
Q ss_pred CCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccch
Q 000909 407 YDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETK 486 (1230)
Q Consensus 407 ~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 486 (1230)
|+|++|+|++||+|+++++.+++|++|+||+|||++|++||+|||.+|.++.++++++++++.++++++++++|+|+||.
T Consensus 531 ~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ 610 (711)
T TIGR00958 531 YQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTE 610 (711)
T ss_pred cCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCc
Confidence 99999999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred hcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeC
Q 000909 487 VGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDN 566 (1230)
Q Consensus 487 ~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~ 566 (1230)
+||+|.+|||||||||+||||++++|+|+|||||||+||+++|+.+++ ....+++|+|+||||+++++.||+|++|++
T Consensus 611 ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~ 688 (711)
T TIGR00958 611 VGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKK 688 (711)
T ss_pred ccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999998 334478999999999999999999999999
Q ss_pred CeEEEecChhHHHhhcCcHHHHH
Q 000909 567 GCLVEIGTHNDLINRIDGHYAKM 589 (1230)
Q Consensus 567 G~i~~~g~~~~l~~~~~~~~~~~ 589 (1230)
|+|+|+|+|+||+++ ++.|+++
T Consensus 689 G~ive~Gt~~eL~~~-~~~y~~l 710 (711)
T TIGR00958 689 GSVVEMGTHKQLMED-QGCYKHL 710 (711)
T ss_pred CEEEEeeCHHHHHhC-CCchHhc
Confidence 999999999999985 7888765
No 23
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.4e-83 Score=795.65 Aligned_cols=566 Identities=21% Similarity=0.314 Sum_probs=486.3
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh-hHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 651 FRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHS-EMQSRIRTYSLIFCSLSLISLAFNLLQHYNF 729 (1230)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1230)
++++++.+++++.+.+++++..+........++.++.+++........ ........+...+.+++++..++.++..+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (574)
T PRK11160 5 LPFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVS 84 (574)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677777777777777766666666667777777654321110 0000011112234445566778888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 730 AYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKL 809 (1230)
Q Consensus 730 ~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 809 (1230)
...+.++..++|.++|++++++|+.||+ +.++|++++|+++|++.++..+...+..++..++.+++++++++.++|.+
T Consensus 85 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~--~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 162 (574)
T PRK11160 85 HDATFRVLTHLRVFTFSKLLPLSPAGLA--RYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTL 162 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhccChHhhc--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 67899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 810 AVVMIAVQPLTILC-FYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSW 888 (1230)
Q Consensus 810 ~l~~l~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (1230)
+++++++.|+..++ .++..+..+...++.++..++..+.+.|.+.|+++||+||.|+.+.++|++..++..+...+..+
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 242 (574)
T PRK11160 163 ALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQAN 242 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888777766543 35555565666777778888889999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000909 889 LAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVS-TGKVIAEAGSMTSDLAKGSTAVASVFKILDRQ 967 (1230)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~ 967 (1230)
..+...++...+..+..++++++|+++ ..|.++.|.+++++.+... ...++..+...+..+.++..+++|+.++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~ 321 (574)
T PRK11160 243 LTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQK 321 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 888888888888888888889999988 4899999998887666433 44577788888999999999999999999876
Q ss_pred CCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC
Q 000909 968 SLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE 1047 (1230)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~ 1047 (1230)
++.+.. .. ....+..+.|+|+||+|+||+. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|+
T Consensus 322 ~~~~~~-----~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~ 393 (574)
T PRK11160 322 PEVTFP-----TT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ 393 (574)
T ss_pred CCCCCC-----cc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 543211 00 0111235789999999999753 346999999999999999999999999999999999999999
Q ss_pred CCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCC
Q 000909 1048 QGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGER 1127 (1230)
Q Consensus 1048 ~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~ 1127 (1230)
+|+|++||+|+++++.+++|++|+||||||++|++||+|||.+++|+.+|+++++|++.+++++++++ |+||||.+||+
T Consensus 394 ~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~ 472 (574)
T PRK11160 394 QGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEG 472 (574)
T ss_pred CceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEE
Q 000909 1128 GVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVV 1207 (1230)
Q Consensus 1128 G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Iv 1207 (1230)
|.+||||||||+|||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||++++..||+|++|++|+++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~ 552 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQII 552 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEE
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred EecCHhHHhhcccccHHHhhh
Q 000909 1208 ERGTYAQLTHMRGAFFNLATL 1228 (1230)
Q Consensus 1208 e~Gt~~eLl~~~g~y~~l~~~ 1228 (1230)
|.|+|+||++++|.|++||+.
T Consensus 553 ~~g~~~~l~~~~g~y~~l~~~ 573 (574)
T PRK11160 553 EQGTHQELLAQQGRYYQLKQR 573 (574)
T ss_pred EeCCHHHHHhcCcHHHHHHhh
Confidence 999999999999999999874
No 24
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=7.4e-84 Score=820.99 Aligned_cols=568 Identities=25% Similarity=0.355 Sum_probs=493.8
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 650 FFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNF 729 (1230)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1230)
++.++...++.++.+...++++++........+++...+++....... ......+...++++.++..++.+++.++.
T Consensus 142 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (710)
T TIGR03796 142 LRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR---QDWLRPLLLGMGLTALLQGVLTWLQLYYL 218 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555555555555555555555566666666665543211 11223344455556677788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 730 AYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKL 809 (1230)
Q Consensus 730 ~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 809 (1230)
...+.++..+++.++|++++++|++||+ ++++|++++|+++| +.++.++...+...+..++.+++.+++++.++|.+
T Consensus 219 ~~~~~~~~~~l~~~~~~~ll~l~~~~~~--~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 295 (710)
T TIGR03796 219 RRLQIKLAVGMSARFLWHILRLPVRFFA--QRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVL 295 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 78999999999988 67888888888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 810 AVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWL 889 (1230)
Q Consensus 810 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1230)
+++.++..|+.+++.++..+.......+..+..++..+.+.|.+.|+++||++|.|+.+.++|++...+..+...+....
T Consensus 296 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 375 (710)
T TIGR03796 296 TLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVL 375 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888777777777777788888899999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 000909 890 AGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSL 969 (1230)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~ 969 (1230)
......+..++..+..++++++|++++..|.+|+|.++++..+...+..++..+...+.++..+..+++|+.++++.+++
T Consensus 376 ~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e 455 (710)
T TIGR03796 376 TQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVD 455 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 88888888888888899999999999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCCCCCCCCCCCCCc-ccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCC
Q 000909 970 IPGSSQAGDGTRGSKL-QKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ 1048 (1230)
Q Consensus 970 ~~~~~~~~~~~~~~~~-~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~ 1048 (1230)
.+...... ....... ++..|.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++
T Consensus 456 ~~~~~~~~-~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~ 533 (710)
T TIGR03796 456 PLLEEEEA-PAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWS 533 (710)
T ss_pred cccccccc-cccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 43211000 0000111 2346789999999999853 3579999999999999999999999999999999999999999
Q ss_pred CeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCC
Q 000909 1049 GSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERG 1128 (1230)
Q Consensus 1049 G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G 1128 (1230)
|+|++||+|+++++.+++|++|+||||||.+|+|||||||.+++|+++++++++|++.++++++++++|+||||.+||+|
T Consensus 534 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 534 GEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred cEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEE
Q 000909 1129 VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVE 1208 (1230)
Q Consensus 1129 ~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive 1208 (1230)
.+||||||||||||||++++|+|||||||||+||++||+.+.+.+++ .++|+|+||||++++..||+|+||++|+|+|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~ 691 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQ 691 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999987 5899999999999999999999999999999
Q ss_pred ecCHhHHhhcccccHHHhh
Q 000909 1209 RGTYAQLTHMRGAFFNLAT 1227 (1230)
Q Consensus 1209 ~Gt~~eLl~~~g~y~~l~~ 1227 (1230)
.|+|+||++++|.|++|++
T Consensus 692 ~G~~~~Ll~~~~~y~~l~~ 710 (710)
T TIGR03796 692 RGTHEELWAVGGAYARLIR 710 (710)
T ss_pred ecCHHHHHHcCCcHHHHhC
Confidence 9999999999999999873
No 25
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-87 Score=727.53 Aligned_cols=502 Identities=29% Similarity=0.419 Sum_probs=430.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 717 ISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVA 796 (1230)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~ 796 (1230)
.+.+++-++.++...+.+..++++..++|+|+..+.+.|+- .+.+|+.+.-..+..+.+. ++...+..+...+.-+.
T Consensus 271 gsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL--~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~ 347 (790)
T KOG0056|consen 271 GSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHL--NRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLG 347 (790)
T ss_pred cccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeee--cccccceeehhccCcchhh-HHHHHHhhcccHHHHhh
Confidence 34567777888888899999999999999999999999997 6778999988888887777 66666666666666665
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHH
Q 000909 797 IAMIM-GLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEA 875 (1230)
Q Consensus 797 ~~~~~-~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~ 875 (1230)
++++. ....+|+.+++++.+..+.............+..+++....+++.....+++.+.+|+|-|++|++..++|.+.
T Consensus 348 va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreA 427 (790)
T KOG0056|consen 348 VAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREA 427 (790)
T ss_pred hhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHH
Confidence 55553 44568888887766655555443332233333344555556667788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 876 QEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGST 955 (1230)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1230)
...+++...+......+..-....+..+..+....+.++++..+..++|+++.+..+++...+|+..+......++++..
T Consensus 428 il~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfi 507 (790)
T KOG0056|consen 428 ILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFI 507 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhh
Confidence 99988876654433333333333333333333344455667789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHH
Q 000909 956 AVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKST 1035 (1230)
Q Consensus 956 s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKST 1035 (1230)
-+++++++++++++..+.+ ..++....+|.|+|+||+|.|+ |++|||+||||+++||++||+|||||+||||
T Consensus 508 DmEnmfdllkee~eVvd~P------~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKST 579 (790)
T KOG0056|consen 508 DMENMFDLLKEEPEVVDLP------GAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKST 579 (790)
T ss_pred hHHHHHHHhhcCchhhcCC------CCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhH
Confidence 9999999999887765431 1222334679999999999996 5678999999999999999999999999999
Q ss_pred HHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHh
Q 000909 1036 VIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISS 1115 (1230)
Q Consensus 1036 L~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~ 1115 (1230)
++++|+||||.++|+|+|||+||+++..++||++||+||||.+||++||.+||.|++|++++||+.+|++.|++||.|.+
T Consensus 580 imRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~ 659 (790)
T KOG0056|consen 580 IMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQ 659 (790)
T ss_pred HHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhc
Q 000909 1116 LKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKL 1195 (1230)
Q Consensus 1116 lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~ 1195 (1230)
+|+||+|.|||+|..||||||||+||||++|++|.|++|||||||||..||+.||.++.+..+++|.|+||||++|+.+|
T Consensus 660 fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnA 739 (790)
T KOG0056|consen 660 FPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNA 739 (790)
T ss_pred CchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCcEEEEecCHhHHhhc-ccccHHHhhhc
Q 000909 1196 DSIALVADGRVVERGTYAQLTHM-RGAFFNLATLQ 1229 (1230)
Q Consensus 1196 D~I~vl~~G~Ive~Gt~~eLl~~-~g~y~~l~~~q 1229 (1230)
|.|+|+++|+|+|.|+|+||+++ +|.|+.||+.|
T Consensus 740 D~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~q 774 (790)
T KOG0056|consen 740 DLILVISNGRIVERGRHEELLKRDGGAYADMWQAQ 774 (790)
T ss_pred cEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHH
Confidence 99999999999999999999999 89999999876
No 26
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7e-83 Score=731.99 Aligned_cols=550 Identities=25% Similarity=0.397 Sum_probs=492.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 668 SLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEK 747 (1230)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 747 (1230)
.++..+.+......+++++..+..++.... ......+...++++.++..++.+.+......++.++...+|..++++
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555666667777666654321 23344556666777778888999999999999999999999999999
Q ss_pred HHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 748 ILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTR 827 (1230)
Q Consensus 748 ~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~ 827 (1230)
+.+.+..|-. ..|+|+..+..+..++.++..+...++.++.+.......++..+..+|..+++++.+.|++.+++++.
T Consensus 83 l~~~gp~~~~--~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 83 LAKLGPAFIA--QKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred HHhCChhhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 77899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 828 KVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWAL 907 (1230)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1230)
....+...++......+..+++.+.+.|+.|+|+||..++..++..+..++.++..++.-+..-...++..++.++..++
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888889999999999999999999999999999999999999999999988887777777788888888887
Q ss_pred HHHHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcc
Q 000909 908 DFWYGGTLVQK-GQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQ 986 (1230)
Q Consensus 908 ~~~~g~~lv~~-g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1230)
...+.+..... |.++....+.++....-+..|+..+...+..-..+..+.+.++.+++.+.+.++... .....+
T Consensus 241 vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~-----~~~~~~ 315 (559)
T COG4988 241 VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGE-----KAEVAN 315 (559)
T ss_pred HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcc-----cccccc
Confidence 77766666666 899999888888888889999999999999999999999999999987766443311 001112
Q ss_pred cccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH
Q 000909 987 KISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY 1066 (1230)
Q Consensus 987 ~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l 1066 (1230)
....+|.++|++|+||+. +++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|.++++.+.|
T Consensus 316 ~~~~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~ 393 (559)
T COG4988 316 EPPIEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAW 393 (559)
T ss_pred CCCceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHH
Confidence 223456777999999854 279999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1067 RKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1067 R~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
|+++++|||+|++|+|||||||.+++|+.+||++++|++++++.+|++. |+|+||++||+|.+|||||+||+++|||++
T Consensus 394 ~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll 472 (559)
T COG4988 394 RKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALL 472 (559)
T ss_pred HhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHh
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLA 1226 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~ 1226 (1230)
++++++|||||||+||.|||+.|++.|.+.++++|||+||||++.+.++|+|+|||+|+++|.|+|++|.+++|.|++|+
T Consensus 473 ~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~ 552 (559)
T COG4988 473 SPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLL 552 (559)
T ss_pred CCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcC
Q 000909 1227 TLQS 1230 (1230)
Q Consensus 1227 ~~q~ 1230 (1230)
..|+
T Consensus 553 ~~q~ 556 (559)
T COG4988 553 KQQE 556 (559)
T ss_pred HHHh
Confidence 9874
No 27
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=8.8e-83 Score=807.21 Aligned_cols=563 Identities=27% Similarity=0.367 Sum_probs=492.8
Q ss_pred chHHHHHHh-cChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHH
Q 000909 8 NNIGIIFRF-ADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAV 86 (1230)
Q Consensus 8 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 86 (1230)
..+++++++ +++.++ .++..++++++..++....|++++.++|.+.... + ...++...+.++++.++.
T Consensus 121 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~------~----~~~l~~~~~~~~~~~~~~ 189 (686)
T TIGR03797 121 LGLRDLLRFALRGARR-DLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA------D----RSLLVQIALALLAAAVGA 189 (686)
T ss_pred ccHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC------C----hhHHHHHHHHHHHHHHHH
Confidence 346677776 344433 3445555566666666666788899999765320 1 122333344455556667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHH
Q 000909 87 MVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFIS 166 (1230)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~ 166 (1230)
.++.+++.++..+.+.++..++|.++|+|++++|++||++ .++| ++++|++ |++.+++++...+...+.+...+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~-~~~g--~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 265 (686)
T TIGR03797 190 AAFQLAQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQ-YSTG--DLASRAM-GISQIRRILSGSTLTTLLSGIFALL 265 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCC-CChh--HHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999999999996 5666 9999997 8999999998888888888888888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHH
Q 000909 167 GLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILD 246 (1230)
Q Consensus 167 ~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~ 246 (1230)
.++++++++|.+++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+++.|+.+.++|++..+
T Consensus 266 ~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~ 345 (686)
T TIGR03797 266 NLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFS 345 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHH
Confidence 89999999999999999999998888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 247 STTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAA 325 (1230)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~ 325 (1230)
+..+...+..........+. .+..+..++++++|++++..|.+|+|.++++..+...+..|+..+...+..++++..+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~ 425 (686)
T TIGR03797 346 RQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLW 425 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888777666555 55556677788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhc
Q 000909 326 SRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQR 405 (1230)
Q Consensus 326 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 405 (1230)
+|+.++++.+++.+... ..+....+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+|+|+|
T Consensus 426 ~ri~~~l~~~~e~~~~~---~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~g 501 (686)
T TIGR03797 426 ERAKPILEALPEVDEAK---TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLG 501 (686)
T ss_pred HHHHHHhcCCcccccCc---CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999998655432211 1122335689999999999743 3579999999999999999999999999999999999
Q ss_pred CCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccc
Q 000909 406 FYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYET 485 (1230)
Q Consensus 406 ~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 485 (1230)
+|+|++|+|++||+|+++++.+++|++||||+|||++|++||+|||.++++ .++++++++|+.++++++++++|+|+||
T Consensus 502 l~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt 580 (686)
T TIGR03797 502 FETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHT 580 (686)
T ss_pred CCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccc
Confidence 999999999999999999999999999999999999999999999999988 8999999999999999999999999999
Q ss_pred hhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEe
Q 000909 486 KVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVD 565 (1230)
Q Consensus 486 ~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~ 565 (1230)
.+||+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.+++. ++|+|+||||+++++.||+|++|+
T Consensus 581 ~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~ 658 (686)
T TIGR03797 581 VISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLD 658 (686)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEE
Confidence 999999999999999999999999999999999999999999999999999886 689999999999999999999999
Q ss_pred CCeEEEecChhHHHhhcCcHHHHHHHHh
Q 000909 566 NGCLVEIGTHNDLINRIDGHYAKMAKLQ 593 (1230)
Q Consensus 566 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 593 (1230)
+|+++|.|+|+||+++ ++.|++++..|
T Consensus 659 ~G~iv~~G~~~~Ll~~-~~~y~~l~~~q 685 (686)
T TIGR03797 659 AGRVVQQGTYDELMAR-EGLFAQLARRQ 685 (686)
T ss_pred CCEEEEECCHHHHHhC-CcHHHHHHHhc
Confidence 9999999999999985 89999988754
No 28
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.9e-82 Score=792.35 Aligned_cols=565 Identities=30% Similarity=0.495 Sum_probs=491.0
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 651 FRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFA 730 (1230)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1230)
..++.+.++.++.+...+++.++........+..+..+++....... ......+...+++++++..++.+++.++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 90 (582)
T PRK11176 14 RRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD---RSVLKWMPLVVIGLMILRGITSFISSYCIS 90 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555444444444444444445555555554432211 111122233344456667788888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 731 YMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLA 810 (1230)
Q Consensus 731 ~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 810 (1230)
+.+.+...++|.++++++++.|..+|+ +.++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.++
T Consensus 91 ~~~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 168 (582)
T PRK11176 91 WVSGKVVMTMRRRLFGHMMGMPVSFFD--KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLS 168 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhC--CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997 678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 811 VVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLA 890 (1230)
Q Consensus 811 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (1230)
+++++++|+.++..+...+..++...+.++..++....+.|.+.|+++||++|.++.+.++|++..++..+...+.....
T Consensus 169 l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (582)
T PRK11176 169 LILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSAS 248 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999889888888777777777778888888888999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 000909 891 GIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLI 970 (1230)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~ 970 (1230)
.....+...+..+...+++++|++++..|.+++|.+++++.+......++..+...+..+.++..+.+|+.++++.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 328 (582)
T PRK11176 249 SISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEK 328 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcC
Confidence 87788888888888888999999999999999999999999988899999999999999999999999999999865442
Q ss_pred CCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCe
Q 000909 971 PGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGS 1050 (1230)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1050 (1230)
+.. ....++..+.|+|+||+|+||++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+
T Consensus 329 ~~~--------~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~ 399 (582)
T PRK11176 329 DEG--------KRVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGE 399 (582)
T ss_pred CCC--------CcCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCce
Confidence 211 01112334679999999999753 357999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCC-CCHHHHHHHHHHhchHHHHHhccccccccccCCCC
Q 000909 1051 VRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLD-ASENEVVEAARAANAHEFISSLKDGYETECGERGV 1129 (1230)
Q Consensus 1051 I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~-~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~ 1129 (1230)
|++||+|+++++.+++|++|+||||||++|+|||||||.+|+++ .+|++++++++.++++++++++|+|+||.+||+|.
T Consensus 400 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~ 479 (582)
T PRK11176 400 ILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGV 479 (582)
T ss_pred EEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCC
Confidence 99999999999999999999999999999999999999999764 79999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEe
Q 000909 1130 QLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVER 1209 (1230)
Q Consensus 1130 ~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~ 1209 (1230)
+|||||||||+||||++++|+|||||||||+||++||+.+.+.|.+..++||+|+||||+++++.||+|++|++|+|+|.
T Consensus 480 ~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~ 559 (582)
T PRK11176 480 LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVER 559 (582)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred cCHhHHhhcccccHHHhhhc
Q 000909 1210 GTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1210 Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
|+|++|+++++.|++|++.|
T Consensus 560 g~~~~l~~~~~~y~~l~~~~ 579 (582)
T PRK11176 560 GTHAELLAQNGVYAQLHKMQ 579 (582)
T ss_pred CCHHHHHhCCChHHHHHHHH
Confidence 99999999999999999876
No 29
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.8e-82 Score=805.35 Aligned_cols=552 Identities=23% Similarity=0.399 Sum_probs=485.1
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 653 LLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYM 732 (1230)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (1230)
++.+.++.++.+...++++++........++++..+++....... ......+...++++.++..++.+++.++..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (694)
T TIGR03375 138 FWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA---FETLWVLAIGVALAIVFDFVLKTLRSYFLDVA 214 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555666666666667777777765542211 11222334444555666778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 733 GGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVV 812 (1230)
Q Consensus 733 ~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~ 812 (1230)
+.++..++|.++|+|++++|+.| + ++++|++++|+ +|++.+++.+...+...+..+..+++.+++++.++|.++++
T Consensus 215 ~~~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 215 GKKADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999998 4 56899999999 89999999988877777777777777777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 813 MIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGI 892 (1230)
Q Consensus 813 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (1230)
.++.+|+.++..++..+......++..+..++..+.+.|++.|+++||+++.|+.+.++|++..++..+...+.......
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888888888888889999999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCC
Q 000909 893 GMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPG 972 (1230)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~ 972 (1230)
...+...+..+..++++|+|++++..|.+|+|.++++..+...+..++..+...+.++..+..+.+|+.++++.+++.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88888888888889999999999999999999999999999999999999999999999999999999999987664322
Q ss_pred CCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEE
Q 000909 973 SSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVR 1052 (1230)
Q Consensus 973 ~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1052 (1230)
. ......++..|.|+|+||+|+||+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 451 ~------~~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 523 (694)
T TIGR03375 451 G------TRFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVL 523 (694)
T ss_pred C------CCCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 1 0111112345789999999999743 45799999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCC
Q 000909 1053 VDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLS 1132 (1230)
Q Consensus 1053 idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1132 (1230)
+||+|+++++++++|++++||||||++|+|||||||.+++|+++++++++|++.++++++++++|+||||.+||+|.+||
T Consensus 524 idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LS 603 (694)
T TIGR03375 524 LDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLS 603 (694)
T ss_pred ECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCH
Q 000909 1133 GGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTY 1212 (1230)
Q Consensus 1133 gGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~ 1212 (1230)
|||||||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+|+|.|+|
T Consensus 604 gGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~ 683 (694)
T TIGR03375 604 GGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPK 683 (694)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred hHHhhc
Q 000909 1213 AQLTHM 1218 (1230)
Q Consensus 1213 ~eLl~~ 1218 (1230)
+||+++
T Consensus 684 ~eLl~~ 689 (694)
T TIGR03375 684 DQVLEA 689 (694)
T ss_pred HHHHHH
Confidence 999976
No 30
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.9e-82 Score=789.65 Aligned_cols=564 Identities=25% Similarity=0.383 Sum_probs=477.0
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 650 FFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNF 729 (1230)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1230)
++++..+.++.++.+.+.+++..+........++.++.+++.......... .....+.++++++.++..++.+++.++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (592)
T PRK10790 11 LKRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL-GLVAGLAAAYVGLQLLAAGLHYAQSLLF 89 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555566666666666666666677777777777776543211111 1111223334445556677788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 730 AYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKL 809 (1230)
Q Consensus 730 ~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 809 (1230)
...+.+...++|.++|+++++.|++||+ ++++|++++|+++|++.++..+...+..++..+..+++.+++++.++|.+
T Consensus 90 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 167 (592)
T PRK10790 90 NRAAVGVVQQLRTDVMDAALRQPLSAFD--TQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRM 167 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 77899999999999999999999999888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 810 AVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWL 889 (1230)
Q Consensus 810 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1230)
++++++++|+.++...+..+......++..+..++....+.|.+.|+++||+||.++.+.++|.+..++..+...+....
T Consensus 168 ~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (592)
T PRK10790 168 ALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRL 247 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888777777777666667777777778889999999999999999999999999999888777766655554
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000909 890 AGIG-MGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQS 968 (1230)
Q Consensus 890 ~~~~-~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~ 968 (1230)
.... ..+...+..+...+..++++. +..|.+++|.++++..+...+..++..+...+.++.++..+.+|+.++++.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 326 (592)
T PRK10790 248 DGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPR 326 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4332 233333333332333333333 57999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCC
Q 000909 969 LIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ 1048 (1230)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~ 1048 (1230)
+.+.. ...+...++|+|+||+|+||+ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++
T Consensus 327 ~~~~~---------~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~ 395 (592)
T PRK10790 327 QQYGN---------DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTE 395 (592)
T ss_pred ccCCC---------CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCC
Confidence 32111 011223468999999999974 3469999999999999999999999999999999999999999
Q ss_pred CeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCC
Q 000909 1049 GSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERG 1128 (1230)
Q Consensus 1049 G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G 1128 (1230)
|+|++||+|+++++.+.+|++|+||||||.+|+|||||||++++ +++|++++++++.+|++++++++|+||||.+||+|
T Consensus 396 G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g 474 (592)
T PRK10790 396 GEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQG 474 (592)
T ss_pred ceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 99999999999999999999999999999999999999999998 68999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEE
Q 000909 1129 VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVE 1208 (1230)
Q Consensus 1129 ~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive 1208 (1230)
.+||||||||||||||++++|+|||||||||+||++||+.|++.|++..++||+|+||||++++..||+|++|++|+++|
T Consensus 475 ~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~ 554 (592)
T PRK10790 475 NNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVE 554 (592)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred ecCHhHHhhcccccHHHhhhc
Q 000909 1209 RGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1209 ~Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
.|+|+||+++++.|+++++.|
T Consensus 555 ~G~~~~L~~~~~~y~~l~~~~ 575 (592)
T PRK10790 555 QGTHQQLLAAQGRYWQMYQLQ 575 (592)
T ss_pred EcCHHHHHhCCCHHHHHHHHH
Confidence 999999999999999999876
No 31
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.7e-82 Score=804.32 Aligned_cols=564 Identities=23% Similarity=0.362 Sum_probs=491.6
Q ss_pred chHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHH
Q 000909 8 NNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVM 87 (1230)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (1230)
..+++++++.+++++.+ +..++++++..++....|++++.++|.+... .. ...+....+.++++.++..
T Consensus 142 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~-------~~---~~~l~~~~~~~~~~~~~~~ 210 (708)
T TIGR01193 142 NSLLKFIPLITRQKKLI-VNIVIAAIIVTLISIAGSYYLQKIIDTYIPH-------KM---MGTLGIISIGLIIAYIIQQ 210 (708)
T ss_pred chHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-------CC---hHHHHHHHHHHHHHHHHHH
Confidence 45677888877665543 4445555555555556668889999976432 11 1223333334444556667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000909 88 VVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISG 167 (1230)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~ 167 (1230)
++.++..++..+.+.++..++|.++|+|++++|+.||++ .++| ++++|++ |++.+++++...+...+.++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~-~~~G--~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 286 (708)
T TIGR01193 211 ILSYIQIFLLNVLGQRLSIDIILSYIKHLFELPMSFFST-RRTG--EIVSRFT-DASSIIDALASTILSLFLDMWILVIV 286 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-Cchh--HHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999999996 5666 9999998 99999999988888888888888888
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHH
Q 000909 168 LAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDS 247 (1230)
Q Consensus 168 ~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~ 247 (1230)
++++++++|.+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++...+
T Consensus 287 ~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~ 366 (708)
T TIGR01193 287 GLFLVRQNMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGD 366 (708)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 248 TTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAAS 326 (1230)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ 326 (1230)
..+...+..........+. .+..+..++++++|++++..|.+|+|.++++..+...+..|+.++...+..++++..+.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ 446 (708)
T TIGR01193 367 YLNKSFKYQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANN 446 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888777666555544 444556677889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcC
Q 000909 327 RIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRF 406 (1230)
Q Consensus 327 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 406 (1230)
|+.++++.+++.+.... ....++..+.|+++||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+
T Consensus 447 ri~~~l~~~~e~~~~~~-~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl 523 (708)
T TIGR01193 447 RLNEVYLVDSEFINKKK-RTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGF 523 (708)
T ss_pred HHHHHHcCCCccccccc-ccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhcc
Confidence 99999987654332111 0112234578999999999973 35699999999999999999999999999999999999
Q ss_pred CCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcC-CCCCCHHHHHHHHHHHhHHHHHHhCCCcccc
Q 000909 407 YDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFG-KLDATMDEVIAAATAANAHNFIRQLPEGYET 485 (1230)
Q Consensus 407 ~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 485 (1230)
|+|++|+|++||+|+++++.+++|++||||||||++|++||+|||.++ .++.++++++++|+.++++++++++|+|+||
T Consensus 524 ~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt 603 (708)
T TIGR01193 524 FQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQT 603 (708)
T ss_pred CCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCc
Confidence 999999999999999999999999999999999999999999999998 5778899999999999999999999999999
Q ss_pred hhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEe
Q 000909 486 KVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVD 565 (1230)
Q Consensus 486 ~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~ 565 (1230)
.+||+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.+++. +++|+|+||||+++++.||+|++|+
T Consensus 604 ~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~ 682 (708)
T TIGR01193 604 ELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLD 682 (708)
T ss_pred EecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEE
Confidence 999999999999999999999999999999999999999999999999999875 6899999999999999999999999
Q ss_pred CCeEEEecChhHHHhhcCcHHHHHHH
Q 000909 566 NGCLVEIGTHNDLINRIDGHYAKMAK 591 (1230)
Q Consensus 566 ~G~i~~~g~~~~l~~~~~~~~~~~~~ 591 (1230)
+|++++.|+|+||+++ ++.|+++++
T Consensus 683 ~G~i~~~G~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 683 HGKIIEQGSHDELLDR-NGFYASLIH 707 (708)
T ss_pred CCEEEEECCHHHHHhc-CCcHHHHhh
Confidence 9999999999999985 889988764
No 32
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.7e-83 Score=716.97 Aligned_cols=541 Identities=26% Similarity=0.405 Sum_probs=456.5
Q ss_pred HHHHHHHHHHHHHHHHHhc-cchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Q 000909 676 SVQPTYALTIGGMISAFFA-KSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAA 754 (1230)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ 754 (1230)
......+..+...++..-. ...+............|+++.+.+.+|+.++.++|.++.+++.+..-.+.|++++.++++
T Consensus 44 ~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~ 123 (591)
T KOG0057|consen 44 ILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLS 123 (591)
T ss_pred HhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3444455555555554421 111111222334456788888999999999999999999999999999999999999999
Q ss_pred ccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000909 755 WFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAM-IMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSS 833 (1230)
Q Consensus 755 ~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~ 833 (1230)
||. ...+|.+.+.+.+-...+...+...+..++..++.+.... .+..-..+..+++.+..+.....+.+........
T Consensus 124 ~~~--~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~ 201 (591)
T KOG0057|consen 124 FFL--SRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNR 201 (591)
T ss_pred hhc--CCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHH
Confidence 997 5678999999999998888888877777777666554444 3333444555555555554444444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 834 VSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGG 913 (1230)
Q Consensus 834 ~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 913 (1230)
...+...+.+.+...+.|++.+.++||+||.|++..++|+..+.++.+...+.....++.......+.....+.+.+.|.
T Consensus 202 fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~ 281 (591)
T KOG0057|consen 202 FRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGS 281 (591)
T ss_pred HHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55666777788889999999999999999999999999999999999988877777666666666666677777777888
Q ss_pred HHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEE
Q 000909 914 TLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIE 993 (1230)
Q Consensus 914 ~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~ 993 (1230)
.-+..|.++.|.+.....++..+..++..+.....++.++..-+..++...+....+.. .+.+.....|.|+
T Consensus 282 ~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~--------~~~~i~~~~~~I~ 353 (591)
T KOG0057|consen 282 NGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE--------AALPIELFGGSIE 353 (591)
T ss_pred hhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh--------ccCCcccCCCcEE
Confidence 87889999999999999999999999999999999999999888888776543332211 0112233567899
Q ss_pred EEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEE
Q 000909 994 MRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALV 1073 (1230)
Q Consensus 994 f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V 1073 (1230)
|+||+|.|+ |++++|+++||+|++||||||||+|||||||++++|+||+| ++|+|+|||+||++++++.+|+.||+|
T Consensus 354 F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~V 430 (591)
T KOG0057|consen 354 FDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVV 430 (591)
T ss_pred EEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEe
Confidence 999999997 45569999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000909 1074 SQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILL 1153 (1230)
Q Consensus 1074 pQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILl 1153 (1230)
|||..||++||-+||.||+|.+++||+.++||++++||.+.++|+||+|.|||+|..||||||||++||||++++|||++
T Consensus 431 PQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 431 PQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred CCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHhhhc
Q 000909 1154 LDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1154 LDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
+|||||+||.+||+.|.+.+.+...++|+|+|+||++++++||+|+|||+|+|.|+|+|+||+++.+.|..+|..|
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTTQ 586 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhccc
Confidence 9999999999999999999999889999999999999999999999999999999999999999888999999876
No 33
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.9e-82 Score=804.27 Aligned_cols=564 Identities=23% Similarity=0.327 Sum_probs=489.8
Q ss_pred chHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHH
Q 000909 8 NNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVM 87 (1230)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (1230)
..+++++++++++++. ++..++++++..+.....|++++.++|.+.... .. ..+..+.+.++++.++..
T Consensus 140 ~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~------~~----~~l~~~~~~~~~~~~~~~ 208 (710)
T TIGR03796 140 SLLRALWRRLRGSRGA-LLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQG------RQ----DWLRPLLLGMGLTALLQG 208 (710)
T ss_pred ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------Ch----hHHHHHHHHHHHHHHHHH
Confidence 3466677777665443 234444444444444455678899999764321 11 122233334445556677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000909 88 VVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISG 167 (1230)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~ 167 (1230)
++.+++.++..+.+.++..++|.++|+|++++|+++|++ .++| ++++|+++| +.+++++...+..++.+++++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~-~~~g--~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~ 284 (710)
T TIGR03796 209 VLTWLQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQ-RHAG--DIASRVQLN-DQVAEFLSGQLATTALDAVMLVFY 284 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC-Cccc--HHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999999997 5667 999999988 789999998899999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHH
Q 000909 168 LAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDS 247 (1230)
Q Consensus 168 ~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~ 247 (1230)
++++++++|.+++++++.+|+.+++..++.++..+..++.++..++..+.+.|.++|+++||++++|+.+.++|++...+
T Consensus 285 ~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~ 364 (710)
T TIGR03796 285 ALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAK 364 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 248 TTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAAS 326 (1230)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ 326 (1230)
..+...+......+...+. .+..+..++++++|++++..|.+|+|.++++..+...+..|+..+...+..++++..+.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ 444 (710)
T TIGR03796 365 LLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLN 444 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888777776665554 555566777889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCC---C-Cccc-CCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHH
Q 000909 327 RIFDRIDRVPEIDGEDT---K-GLVL-DEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIA 401 (1230)
Q Consensus 327 ri~~~l~~~~~~~~~~~---~-~~~~-~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ 401 (1230)
|+.++++.+++.+.... . .... +...+.|+++||+|+|++. ++++|+|+||+|+|||++|||||||||||||++
T Consensus 445 ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlk 523 (710)
T TIGR03796 445 RLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAK 523 (710)
T ss_pred HHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHH
Confidence 99999987654332110 0 0111 2335689999999999853 357999999999999999999999999999999
Q ss_pred HHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCC
Q 000909 402 LVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPE 481 (1230)
Q Consensus 402 ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 481 (1230)
+|+|+|+|++|+|.+||+|+++++.+++|++||||||||++|++||+|||.++.++.++++++++|+.+++++++.++|+
T Consensus 524 lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~ 603 (710)
T TIGR03796 524 LVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPG 603 (710)
T ss_pred HHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcC
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred cccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEE
Q 000909 482 GYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLI 561 (1230)
Q Consensus 482 g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i 561 (1230)
|++|.+||+|.+|||||||||+||||++++|+|+|||||||+||+++|+.+.+.+++ .++|+|+||||+++++.||+|
T Consensus 604 gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~I 681 (710)
T TIGR03796 604 GYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEI 681 (710)
T ss_pred cccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEE
Confidence 999999999999999999999999999999999999999999999999999999986 589999999999999999999
Q ss_pred EEEeCCeEEEecChhHHHhhcCcHHHHHH
Q 000909 562 AVVDNGCLVEIGTHNDLINRIDGHYAKMA 590 (1230)
Q Consensus 562 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 590 (1230)
++|++|++++.|+|+||+++ ++.|++++
T Consensus 682 ivl~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 682 IVLERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred EEEeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 99999999999999999985 88898876
No 34
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1e-81 Score=778.98 Aligned_cols=566 Identities=21% Similarity=0.299 Sum_probs=482.2
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 000909 10 IGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVV 89 (1230)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 89 (1230)
+++++++.+++++. ++++++++++..+.....|++++.++|...... .......... .....+++++++..++
T Consensus 4 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~ 76 (574)
T PRK11160 4 LLPFLKLYKRHWFM-LSLGILLAIVTLLASIGLLTLSGWFLSASAVAG-----LAGLYSFNYM-LPAAGVRGAAIGRTAG 76 (574)
T ss_pred hHHHHHHHhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ccchhhHHHH-hHHHHHHHHHHHHHHH
Confidence 45677777766543 456666666666666666678899998643110 0000000111 1122344455677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000909 90 AFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLA 169 (1230)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~ 169 (1230)
.+++.++.++.+.++..++|.++|+|++++|+.+|++ .++| ++++|+++|++.+++++.+.++.++..+++++++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~-~~~g--~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (574)
T PRK11160 77 RYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLAR-YRQG--DLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTI 153 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhcc-CChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999997 5666 999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHH
Q 000909 170 FSTYFSWRLSLVAFPTLLLLII-PGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDST 248 (1230)
Q Consensus 170 ~~~~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~ 248 (1230)
++++++|.+++++++++|++++ +..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++.
T Consensus 154 ~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~ 233 (574)
T PRK11160 154 GLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQW 233 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHH
Confidence 9999999999988877776654 446677888888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 000909 249 TKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFIL-SGLSLGSALPELKYFTEASIAAS 326 (1230)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~s~~ 326 (1230)
.+...+..+..+...+.. .+..+..++++++|+++ ..|.+++|.+++++.+... ...++..+...+..++++..+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 312 (574)
T PRK11160 234 LAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASAR 312 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888777666655 44455566677888887 4788999999888766544 34466777778889999999999
Q ss_pred HHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcC
Q 000909 327 RIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRF 406 (1230)
Q Consensus 327 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 406 (1230)
|+.++++.+++.+.... .......+.|+++||+|+|+++ ++++|+|+||+++|||++|||||||||||||+++|+|+
T Consensus 313 ri~~ll~~~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~ 389 (574)
T PRK11160 313 RINEITEQKPEVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRA 389 (574)
T ss_pred HHHHHHhCCCCCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 99999987665322111 1112234679999999999753 34699999999999999999999999999999999999
Q ss_pred CCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccch
Q 000909 407 YDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETK 486 (1230)
Q Consensus 407 ~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 486 (1230)
|+|++|+|++||+|+++++.+++|++|+||+|||++|++||+|||.++.++.++++++++++.+++++++++ |+|+||.
T Consensus 390 ~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~ 468 (574)
T PRK11160 390 WDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAW 468 (574)
T ss_pred CCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCch
Confidence 999999999999999999999999999999999999999999999999988899999999999999999999 9999999
Q ss_pred hcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeC
Q 000909 487 VGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDN 566 (1230)
Q Consensus 487 ~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~ 566 (1230)
+||+|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.+.+..+++|+|+||||+++++.||+|++|++
T Consensus 469 vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~ 548 (574)
T PRK11160 469 LGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDN 548 (574)
T ss_pred hcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CeEEEecChhHHHhhcCcHHHHHHH
Q 000909 567 GCLVEIGTHNDLINRIDGHYAKMAK 591 (1230)
Q Consensus 567 G~i~~~g~~~~l~~~~~~~~~~~~~ 591 (1230)
|+++|.|+|+||+++ ++.|+++++
T Consensus 549 G~i~~~g~~~~l~~~-~g~y~~l~~ 572 (574)
T PRK11160 549 GQIIEQGTHQELLAQ-QGRYYQLKQ 572 (574)
T ss_pred CeEEEeCCHHHHHhc-CcHHHHHHh
Confidence 999999999999985 899999875
No 35
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.6e-81 Score=795.98 Aligned_cols=564 Identities=27% Similarity=0.415 Sum_probs=494.3
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 652 RLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAY 731 (1230)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (1230)
.+++..++.++.+...++++++........++++..+++....... ......+.+.++++.++..++.+++.++...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~ 205 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTYLFAH 205 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455555555555555555555566777777766542211 1223344455566667778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 732 MGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAV 811 (1230)
Q Consensus 732 ~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 811 (1230)
.+.++..++|.++|++++++|+.||+ .+++|++++|+ +|++.+++++...+...+..+..+++.++++++++|.+++
T Consensus 206 ~~~~~~~~l~~~~~~~l~~l~~~~f~--~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 282 (694)
T TIGR01846 206 LTSRIDVELGARLYRHLLGLPLGYFE--SRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTG 282 (694)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHcC--CCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 78899999999 6999999998877777776666666667788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 812 VMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAG 891 (1230)
Q Consensus 812 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (1230)
++++++|+.++..++..+..++...+..+..++..+.+.|++.|+++||++|.|+.+.++|++..++..+...+..+...
T Consensus 283 i~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (694)
T TIGR01846 283 VVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGN 362 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888887777777777777777788889999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 000909 892 IGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIP 971 (1230)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~ 971 (1230)
....+...+..+..++++|+|++++..|.+|+|.++++..+...+..|+..+...+.++..+..+++|+.++++.+++.+
T Consensus 363 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 442 (694)
T TIGR01846 363 IAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPR 442 (694)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 88888888888889999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeE
Q 000909 972 GSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSV 1051 (1230)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I 1051 (1230)
.. .....+...|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|
T Consensus 443 ~~-------~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I 514 (694)
T TIGR01846 443 SA-------GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQV 514 (694)
T ss_pred CC-------CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 11 001112235789999999999743 3469999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCC
Q 000909 1052 RVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQL 1131 (1230)
Q Consensus 1052 ~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~L 1131 (1230)
++||+|+++++.+++|++++||||||.+|+|||||||.+++|+++++++++|++.++++++++++|+||||.++++|.+|
T Consensus 515 ~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~L 594 (694)
T TIGR01846 515 LVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANL 594 (694)
T ss_pred EECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecC
Q 000909 1132 SGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1132 SgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt 1211 (1230)
|||||||+|||||++++|+|||||||||+||++||+.+.+.|++..+++|+|+||||++++..||+|+||++|+|+|.|+
T Consensus 595 SgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~ 674 (694)
T TIGR01846 595 SGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGR 674 (694)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred HhHHhhcccccHHHhhhc
Q 000909 1212 YAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1212 ~~eLl~~~g~y~~l~~~q 1229 (1230)
|+||++++|.|++|++.|
T Consensus 675 ~~~l~~~~~~y~~l~~~~ 692 (694)
T TIGR01846 675 HEELLALQGLYARLWQQQ 692 (694)
T ss_pred HHHHHHcCChHHHHHHhh
Confidence 999999999999999876
No 36
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-81 Score=706.57 Aligned_cols=505 Identities=22% Similarity=0.349 Sum_probs=437.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000909 713 SLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTT 792 (1230)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~ 792 (1230)
++++...+..++..+..+.+..++...+|.++|+++...+..-.. .-.+|+++||+..|++.+|+.+-..+.+.+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~--r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLL--RYRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHH--hcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 346677778888888899999999999999999999988877665 557899999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHH
Q 000909 793 SAVAIAMIMGLVVAWKLAVVMIAVQPL-TILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQI 871 (1230)
Q Consensus 793 ~~~~~~~~~~~~~~~~l~l~~l~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~ 871 (1230)
....+.++..-+++|.+++.+..+..+ .++......++-++..++.....+...+++.|.+.|....+.||+++.+.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 877777777777788877665544443 3444555666666666677777788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000909 872 FDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAG-SMTSDL 950 (1230)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 950 (1230)
+.+..+.+.+...+...+.++..++.+++..+..+..+.+.+..+..|..+......+.+.+.....++..+. ..+.+.
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~l 303 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHL 303 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHh
Confidence 9999999999999999998888888888777777644444444566677775444444444445555555555 677889
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCC
Q 000909 951 AKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSG 1030 (1230)
Q Consensus 951 ~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SG 1030 (1230)
.+...|+.|+.++.+.+++...+ +. +.+...-.++++||+|+||++ +.++|+|+||++++||||||+||||
T Consensus 304 gq~~~Sa~Rl~~i~~q~~e~~~~-----~~---~~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SG 374 (573)
T COG4987 304 GQVIASARRLNDILDQKPEVTFP-----DE---QTATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSG 374 (573)
T ss_pred hHHHHHHHHHhhhccCCcccCCC-----cc---ccCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCC
Confidence 99999999999999887765432 00 011111169999999999865 4579999999999999999999999
Q ss_pred CCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchH
Q 000909 1031 CGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAH 1110 (1230)
Q Consensus 1031 SGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~ 1110 (1230)
|||||++++|.|.|+|++|+|..+|.|++.++.+++|+.|++++|.++||++|+|+||.+++|++||||+|+++++++++
T Consensus 375 sGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~ 454 (573)
T COG4987 375 SGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLE 454 (573)
T ss_pred CCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCch
Q 000909 1111 EFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLN 1190 (1230)
Q Consensus 1111 ~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ 1190 (1230)
+++++.|+||+|++||+|.+|||||||||||||+||+|.|++||||||.+||++||+.|.+.+.+..+|||+|+||||+.
T Consensus 455 ~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~ 534 (573)
T COG4987 455 KLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLR 534 (573)
T ss_pred HHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHhhh
Q 000909 1191 TIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATL 1228 (1230)
Q Consensus 1191 ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~ 1228 (1230)
.++.||||+|||+|+++|+|+|.+|++++|.|++|++.
T Consensus 535 ~le~~drIivl~~Gkiie~G~~~~Ll~~~g~~~~l~q~ 572 (573)
T COG4987 535 GLERMDRIIVLDNGKIIEEGTHAELLANNGRYKRLYQL 572 (573)
T ss_pred cHhhcCEEEEEECCeeeecCCHHhhhccccHHHHHhcc
Confidence 99999999999999999999999999999999999864
No 37
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.6e-81 Score=794.87 Aligned_cols=556 Identities=25% Similarity=0.365 Sum_probs=485.8
Q ss_pred chHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHH
Q 000909 8 NNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVM 87 (1230)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (1230)
..+.+++++++++++. +...++++++..++....|++++.++|.+.... +. ..+....+.++++.++..
T Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~------~~----~~l~~~~~~~~~~~~~~~ 201 (694)
T TIGR03375 133 RPKHWFWSTLKESWPL-YRDVLIASLLINLLALASPLFVMNVYDRVVPNQ------AF----ETLWVLAIGVALAIVFDF 201 (694)
T ss_pred ccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC------cH----hHHHHHHHHHHHHHHHHH
Confidence 3466677777665443 344455555555556666788899999764220 11 122333333444455667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000909 88 VVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISG 167 (1230)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~ 167 (1230)
++.+++.++..+.+.++..++|.++|+|++++|++| ++ .++| ++++|+ +|++.+++++...+...+.++.++++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~-~~~G--~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~ 276 (694)
T TIGR03375 202 VLKTLRSYFLDVAGKKADLILSAKLFERVLGLRMEA-RP-ASVG--SFANQL-REFESVRDFFTSATLTALIDLPFALLF 276 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CC-CChh--HHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999998 54 4556 999999 799999999988888888888888888
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHH
Q 000909 168 LAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDS 247 (1230)
Q Consensus 168 ~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~ 247 (1230)
++++++++|.++++.++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|++|+.+.++|++..++
T Consensus 277 ~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~ 356 (694)
T TIGR03375 277 LLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAA 356 (694)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 248 TTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAAS 326 (1230)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ 326 (1230)
..+...+..+.......+. .+..+..++++++|++++..|.+|+|.++++..+...+..|+..+...+..++.+..+.+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ 436 (694)
T TIGR03375 357 LARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQ 436 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888777766555 555566677889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcC
Q 000909 327 RIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRF 406 (1230)
Q Consensus 327 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 406 (1230)
|+.++++.+++.+... .........+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+
T Consensus 437 ri~~il~~~~e~~~~~-~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl 514 (694)
T TIGR03375 437 SLDELMQLPVERPEGT-RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGL 514 (694)
T ss_pred HHHHHHcCCCCCCCCC-CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 9999998765432211 111112335689999999999743 45699999999999999999999999999999999999
Q ss_pred CCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccch
Q 000909 407 YDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETK 486 (1230)
Q Consensus 407 ~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 486 (1230)
|+|++|+|.+||+|+++++.+++|++|+||+|||++|++||+|||.+++++.++++++++++.++++++++++|+|+||.
T Consensus 515 ~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~ 594 (694)
T TIGR03375 515 YQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQ 594 (694)
T ss_pred CCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccce
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred hcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeC
Q 000909 487 VGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDN 566 (1230)
Q Consensus 487 ~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~ 566 (1230)
+||+|.+||||||||++||||++++|+|+|||||||+||+++|+.+.+.+.+..+++|+|+||||+++++.||+|++|++
T Consensus 595 i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~ 674 (694)
T TIGR03375 595 IGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDN 674 (694)
T ss_pred ecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CeEEEecChhHHHhh
Q 000909 567 GCLVEIGTHNDLINR 581 (1230)
Q Consensus 567 G~i~~~g~~~~l~~~ 581 (1230)
|+++|+|+|+||+++
T Consensus 675 G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 675 GRIVADGPKDQVLEA 689 (694)
T ss_pred CEEEeeCCHHHHHHH
Confidence 999999999999874
No 38
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.9e-81 Score=715.05 Aligned_cols=549 Identities=26% Similarity=0.353 Sum_probs=480.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 30 VGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIR 109 (1230)
Q Consensus 30 ~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr 109 (1230)
+++.+.++......+++..+++.+... . ....+..+...++++.+++.++.+.......+.+.++..++|
T Consensus 7 ll~~l~~i~~i~qa~llA~~l~~l~~~-------~---~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR 76 (559)
T COG4988 7 LLAVLSGIAIIAQAALLADILTKLIEG-------Q---LFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLR 76 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-------c---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444445556666655422 1 113344555566677778888999999999999999999999
Q ss_pred HHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000909 110 YKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTYFSWRLSLVAFPTLLLL 189 (1230)
Q Consensus 110 ~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~~~~~~ 189 (1230)
.++++|+.++++.+-.+ .++| +..+.++..++.++.+++..+|.++...+.++..++.+++++|.-++++++++|++
T Consensus 77 ~~~l~~l~~~gp~~~~~-~~~g--~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlI 153 (559)
T COG4988 77 QLVLDKLAKLGPAFIAQ-KPAG--SAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLI 153 (559)
T ss_pred HHHHHHHHhCChhhhcC-CCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999998886 5667 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000909 190 IIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAVGST-GL 268 (1230)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 268 (1230)
.+++..++++.++..+++...+.+.++.+-+.++|+.|+|.|+..+...+++.+..++.++..++.-+..-+..... ++
T Consensus 154 PlfMilvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeff 233 (559)
T COG4988 154 PLFMILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFF 233 (559)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888766665555555 66
Q ss_pred HHHHHHHHHHHHHHHHHh-cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcc
Q 000909 269 SFAIWAFLAWYGSHLVMF-KGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPEIDGEDTKGLV 347 (1230)
Q Consensus 269 ~~~~~~~~~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~ 347 (1230)
.+...+++..+.+..... |.++....+.++...--++.|+..+...++.-+.+.++.+.++.+++.+++..+.......
T Consensus 234 a~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~ 313 (559)
T COG4988 234 AYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEV 313 (559)
T ss_pred HHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcccccc
Confidence 666666666665655666 7888888777777777778899999999999999999999999999876553322211111
Q ss_pred cCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH
Q 000909 348 LDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK 427 (1230)
Q Consensus 348 ~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~ 427 (1230)
......+++.+|++|.||++ +++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||++..+++.+
T Consensus 314 ~~~~~~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~ 391 (559)
T COG4988 314 ANEPPIEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPE 391 (559)
T ss_pred ccCCCceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHH
Confidence 12223356666999999864 2799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 428 WVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 428 ~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
.||++++||+|+|++|++||||||.+++++.+++++.++++.+++.+++.. |+|+||.+||+|.+|||||+||+++|||
T Consensus 392 ~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARA 470 (559)
T COG4988 392 AWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARA 470 (559)
T ss_pred HHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHH
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYA 587 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 587 (1230)
++++++++|||||||+||.+||+.|.+.|.++.+++|+|+||||++.+.+||+|+|||+|+++|+|+|++|.++ ++.|+
T Consensus 471 ll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~ 549 (559)
T COG4988 471 LLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYA 549 (559)
T ss_pred hcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred HHHHHhhc
Q 000909 588 KMAKLQRQ 595 (1230)
Q Consensus 588 ~~~~~~~~ 595 (1230)
+++..|+.
T Consensus 550 ~l~~~q~~ 557 (559)
T COG4988 550 NLLKQQEG 557 (559)
T ss_pred HHHHHHhc
Confidence 99987754
No 39
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-84 Score=708.19 Aligned_cols=556 Identities=31% Similarity=0.394 Sum_probs=452.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
Q 000909 27 LGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYL--GLAVMVVAFLEGYCWSKTSERQ 104 (1230)
Q Consensus 27 ~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~ 104 (1230)
+..++.++..++....|.+.++++|.+..+ +... ...++.+..+.++- +-+..++.-+++++|..+.+-.
T Consensus 219 ~cl~ll~i~rli~~~~pi~~k~iv~~ltap-------~~~~-~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyt 290 (790)
T KOG0056|consen 219 FCLFLLIIGRLINVSLPILSKWIVDELTAP-------DTFQ-YSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYT 290 (790)
T ss_pred HHHHHHHHHHHHhhhhHHhHHHHHHhhcCc-------chhh-HHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhH
Confidence 334444444455555667888999877532 1100 11122222211111 1123466677888888899999
Q ss_pred HHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHH
Q 000909 105 VVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVF-ISGLAFSTYFSWRLSLVAF 183 (1230)
Q Consensus 105 ~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~l~l~~~ 183 (1230)
.+++-.++|+|+.++++.|+-+ .++| +++.-+++..+.+. ++...+.++.-.+.-+ ++.+.+...++|+++++++
T Consensus 291 tR~ie~~lfrHlh~LSlrwHL~-rrtG--eVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVf 366 (790)
T KOG0056|consen 291 TREIETELFRHLHNLSLRWHLN-RRTG--EVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVF 366 (790)
T ss_pred HHHHHHHHHHHHHhhceeeeec-cccc--ceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHH
Confidence 9999999999999999999987 5677 98877765555444 3332222222222222 2223344557999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 184 PTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAV 263 (1230)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (1230)
+++.++..+...+.....+..++...+..+..+.-.+++-+..|||.||+|+++.++|.+...++.+...|....-.+..
T Consensus 367 l~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN 446 (790)
T KOG0056|consen 367 LMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLN 446 (790)
T ss_pred HHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888877777766666667777766666777778899999999999999999999999999999988877554433333
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 000909 264 GST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPEIDGED 342 (1230)
Q Consensus 264 ~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 342 (1230)
... .+..+..+..-.+.++++..+.+++|+++.+..|++...+|++.+......+|+...-+++.+++++++++..+.+
T Consensus 447 ~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P 526 (790)
T KOG0056|consen 447 IVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP 526 (790)
T ss_pred HHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC
Confidence 222 2222223333344556677888999999999999999999999999999999999999999999999888766543
Q ss_pred CCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecC
Q 000909 343 TKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIR 422 (1230)
Q Consensus 343 ~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~ 422 (1230)
. ..+....+|.|+|+||+|.|+ +.+++|+||||++.||+.+|+|||||+||||++++|.|||+.++|.|.|||+||+
T Consensus 527 ~-a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIr 603 (790)
T KOG0056|consen 527 G-APPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIR 603 (790)
T ss_pred C-CCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHH
Confidence 2 233345678999999999996 4578999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHH
Q 000909 423 RLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 423 ~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 502 (1230)
++...++|++||+||||..||++||..||.|++|.+++||+.+|++.+++||.|.++|+||+|.+||+|-.||||||||+
T Consensus 604 nvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRV 683 (790)
T KOG0056|consen 604 NVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRV 683 (790)
T ss_pred HHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhc
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRI 582 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 582 (1230)
||||+++++|.|++|||+|||||..||+.|+.++.+...++|.|+|+||++++-+||.|+|+++|+|+|.|+||||+++.
T Consensus 684 AiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rd 763 (790)
T KOG0056|consen 684 AIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRD 763 (790)
T ss_pred HHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999977
Q ss_pred CcHHHHHHHHhhccc
Q 000909 583 DGHYAKMAKLQRQFS 597 (1230)
Q Consensus 583 ~~~~~~~~~~~~~~~ 597 (1230)
+|.|++||+.|+...
T Consensus 764 gG~Ya~MWq~qqa~g 778 (790)
T KOG0056|consen 764 GGAYADMWQAQQAMG 778 (790)
T ss_pred CCcHHHHHHHHHhcC
Confidence 899999998776443
No 40
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-80 Score=776.46 Aligned_cols=566 Identities=31% Similarity=0.468 Sum_probs=490.9
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 000909 10 IGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVV 89 (1230)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 89 (1230)
+++++++.+++++. +++.+++.++..+.....+++++.++|..... ... .......+.++++.++..++
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-------~~~---~~~~~~~~~~~~~~l~~~~~ 81 (582)
T PRK11176 13 FRRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGK-------ADR---SVLKWMPLVVIGLMILRGIT 81 (582)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------Cch---hHHHHHHHHHHHHHHHHHHH
Confidence 45677777666544 34445555555555556667788888865422 111 11222222334455667778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000909 90 AFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLA 169 (1230)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~ 169 (1230)
.++..++..+.+.++..++|..+++++.+.|.++|++ .++| ++++|+++|++.+++.+...+..++..++++++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~-~~~g--~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~ 158 (582)
T PRK11176 82 SFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDK-QSTG--TLLSRITYDSEQVASSSSGALITVVREGASIIGLFI 158 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CCcc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999999999999999999986 5666 999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHH
Q 000909 170 FSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTT 249 (1230)
Q Consensus 170 ~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~ 249 (1230)
++++++|.+++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..
T Consensus 159 ~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~ 238 (582)
T PRK11176 159 MMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMR 238 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHH
Confidence 99999999999999988988888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 250 KLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRI 328 (1230)
Q Consensus 250 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri 328 (1230)
+...+..+......... .+..+...+++++|++.+..|.+++|.++++..+......|+..+...+..++.+..+.+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri 318 (582)
T PRK11176 239 QQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTL 318 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888877776655554 44555666778889999999999999999988888888899999999999999999999999
Q ss_pred HHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 000909 329 FDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD 408 (1230)
Q Consensus 329 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 408 (1230)
.++++.+++.+... ...++..+.|+++||+|+|+++ ++++|+|+||+|++||++||+|+||||||||+++|+|+|+
T Consensus 319 ~~~~~~~~~~~~~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~ 394 (582)
T PRK11176 319 FAILDLEQEKDEGK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD 394 (582)
T ss_pred HHHhcCCCcCCCCC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC
Confidence 99987654322111 1112234579999999999753 3579999999999999999999999999999999999999
Q ss_pred CCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCC-CCHHHHHHHHHHHhHHHHHHhCCCcccchh
Q 000909 409 ADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLD-ATMDEVIAAATAANAHNFIRQLPEGYETKV 487 (1230)
Q Consensus 409 ~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~ 487 (1230)
|++|+|++||+|+++++.+++|++|+||||||++|++||+|||.+|+++ .++++++++++.++++++++++|+|+||.+
T Consensus 395 p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~i 474 (582)
T PRK11176 395 IDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVI 474 (582)
T ss_pred CCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCcee
Confidence 9999999999999999999999999999999999999999999999764 689999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCC
Q 000909 488 GERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNG 567 (1230)
Q Consensus 488 ~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G 567 (1230)
|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+.+.+..+++|+|+||||++.++.||+|++|++|
T Consensus 475 g~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 475 GENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDG 554 (582)
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999987899999999999999999999999999
Q ss_pred eEEEecChhHHHhhcCcHHHHHHHHhh
Q 000909 568 CLVEIGTHNDLINRIDGHYAKMAKLQR 594 (1230)
Q Consensus 568 ~i~~~g~~~~l~~~~~~~~~~~~~~~~ 594 (1230)
+++|.|+|++++++ ++.|+++++.|.
T Consensus 555 ~i~e~g~~~~l~~~-~~~y~~l~~~~~ 580 (582)
T PRK11176 555 EIVERGTHAELLAQ-NGVYAQLHKMQF 580 (582)
T ss_pred EEEEeCCHHHHHhC-CChHHHHHHHHh
Confidence 99999999999986 889999987653
No 41
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.2e-80 Score=775.44 Aligned_cols=563 Identities=32% Similarity=0.523 Sum_probs=506.5
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 653 LLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYM 732 (1230)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (1230)
++++.++.++.+++++++..+.+...+..++.+..+++..+.... ......+...++++.++..++.+++.++....
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 81 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD---RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWV 81 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555666777777777777777777777777777765443211 11233344456667777788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 733 GGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVV 812 (1230)
Q Consensus 733 ~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~ 812 (1230)
+.++..++|..+++++++.|.++|+ +.+.|++++|+++|++.++..+...+..++..++.++++++++++++|.++++
T Consensus 82 ~~~~~~~lr~~l~~~~~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i 159 (571)
T TIGR02203 82 SNKVVRDIRVRMFEKLLGLPVSFFD--RQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLI 159 (571)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhC--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999999997 67899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 813 MIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGI 892 (1230)
Q Consensus 813 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (1230)
++++.|+.++..++..+.......+..+..++..+.+.|.++|+++||+++.++.+.++|++..++..+...+..+....
T Consensus 160 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (571)
T TIGR02203 160 VVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSI 239 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888888899999999999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCC
Q 000909 893 GMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPG 972 (1230)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~ 972 (1230)
...+...+..+..++++++|++++..|.+++|.++++..+...+..|+..+...+..+.++..+.+|+.++++.+++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 319 (571)
T TIGR02203 240 SSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT 319 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88888888888889999999999999999999999999999999999999999999999999999999999986554321
Q ss_pred CCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEE
Q 000909 973 SSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVR 1052 (1230)
Q Consensus 973 ~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1052 (1230)
. . .+..+..++|+|+||+|+|+++ ++++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|+
T Consensus 320 ~------~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~ 390 (571)
T TIGR02203 320 G------T--RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQIL 390 (571)
T ss_pred C------C--CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEE
Confidence 1 0 0111234679999999999754 45799999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCC-CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCC
Q 000909 1053 VDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKL-DASENEVVEAARAANAHEFISSLKDGYETECGERGVQL 1131 (1230)
Q Consensus 1053 idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~-~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~L 1131 (1230)
+||+|+++++.+++|++++||||||++|+|||||||.++++ +.++++++++++.+++++++.++|+|+||++|++|.+|
T Consensus 391 i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~L 470 (571)
T TIGR02203 391 LDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLL 470 (571)
T ss_pred ECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcC
Confidence 99999999999999999999999999999999999999986 89999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecC
Q 000909 1132 SGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1132 SgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt 1211 (1230)
|||||||||||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+
T Consensus 471 SgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~ 550 (571)
T TIGR02203 471 SGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGT 550 (571)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred HhHHhhcccccHHHhhhc
Q 000909 1212 YAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1212 ~~eLl~~~g~y~~l~~~q 1229 (1230)
|++|+++++.|++++..|
T Consensus 551 ~~~l~~~~~~~~~~~~~~ 568 (571)
T TIGR02203 551 HNELLARNGLYAQLHNMQ 568 (571)
T ss_pred HHHHHHcCCHHHHHHHHh
Confidence 999999999999988765
No 42
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-80 Score=698.96 Aligned_cols=576 Identities=26% Similarity=0.367 Sum_probs=471.7
Q ss_pred cccccchHHHHHHhcChhhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHH
Q 000909 3 REKNKNNIGIIFRFADRTDILL----MVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLY 78 (1230)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (1230)
..++....+.+..|.++++... ++.++++.+.+.......|.+++.++|...... .... ........+..
T Consensus 6 ~s~~~~~~~~l~~~~~~k~~p~~r~~v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~-----~~~a-~~~~~~~~~~~ 79 (591)
T KOG0057|consen 6 RSSKLKILRSLVSYKWPKSRPVLRFRVFPALGLLLGAKILNVQVPFIFKLIIDGLNDAD-----GNPA-VLSTITALLAG 79 (591)
T ss_pred ccchhHHHHHHHhhheecCCceeeehHHHHHHHHHhhhHhheehHHHHHHHHhhhhhcc-----cCcc-hhhhhhHHHHH
Confidence 3333345677777776654432 222333333334556666788889988763110 0110 11122233445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHH
Q 000909 79 FVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFV 158 (1230)
Q Consensus 79 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~ 158 (1230)
+.+..++..++..++...+.++.+++..+.-.++|.+++++++++|.+ ..+| ++.+.+..-...|..++...+..++
T Consensus 80 y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~-~~tG--~l~~~idRgsraI~~vl~~~V~~i~ 156 (591)
T KOG0057|consen 80 YGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLS-RGTG--ALNRIIDRGSRAISFVLSAMVFNII 156 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcC-CCcc--hHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 566677788899999999999999999999999999999999999986 4556 9999999888889888877766666
Q ss_pred HHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHH
Q 000909 159 MNASVFISGL-AFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRI 237 (1230)
Q Consensus 159 ~~~~~~i~~~-~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 237 (1230)
..++-+.... .+..-++...+++.+..+..+..+......+..+..++.+++.+...+.+-|++.+..+||+||.|+++
T Consensus 157 p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~E 236 (591)
T KOG0057|consen 157 PTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYE 236 (591)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHH
Confidence 6554433333 333445666667766666666666666777778888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 238 IDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELK 316 (1230)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 316 (1230)
.+||+....++.+...+.....++..... .+.....+.+++.|..-+..+.+|.|+++........+..|+..+...+.
T Consensus 237 a~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr 316 (591)
T KOG0057|consen 237 ASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYR 316 (591)
T ss_pred HHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999998888766666554444 44445555666677777788899999999988888888899998888888
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcH
Q 000909 317 YFTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGK 396 (1230)
Q Consensus 317 ~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGK 396 (1230)
.+.++..-+...+...+....+.+ ...++...++.|+|+||+|+|++ ++++|+++||+|++||++||||+|||||
T Consensus 317 ~~~q~l~Dm~~~~~l~~~~~~i~~---~~~~i~~~~~~I~F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGK 391 (591)
T KOG0057|consen 317 ELRQALTDMRTLFILLEVDEDIQE---AALPIELFGGSIEFDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGK 391 (591)
T ss_pred HHHHHHHhHHHHHhhhhhhhhhhh---ccCCcccCCCcEEEEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCH
Confidence 888888777776655433222111 11233445678999999999973 4569999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHH
Q 000909 397 STAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFI 476 (1230)
Q Consensus 397 STl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i 476 (1230)
||++++|+||++ ++|+|+|||+|+++++++++|+.|||||||..||++||.+||.||++.++++++.++|+.+++||.+
T Consensus 392 STilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i 470 (591)
T KOG0057|consen 392 STILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVI 470 (591)
T ss_pred HHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHH
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh
Q 000909 477 RQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVR 556 (1230)
Q Consensus 477 ~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~ 556 (1230)
.++|+||+|.+||+|..|||||||||+||||+++||||+++|||||+||.+||+.+.+.+.+...+||+|+|.||+++++
T Consensus 471 ~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~ 550 (591)
T KOG0057|consen 471 SRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLK 550 (591)
T ss_pred HhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred ccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHHhh
Q 000909 557 NADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQR 594 (1230)
Q Consensus 557 ~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 594 (1230)
+||+|++++||++.|.|+|+||+. +++.|.++|..|.
T Consensus 551 ~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 551 DFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQT 587 (591)
T ss_pred cCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhcccc
Confidence 999999999999999999999999 5899999987654
No 43
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7.6e-80 Score=780.58 Aligned_cols=567 Identities=29% Similarity=0.443 Sum_probs=494.9
Q ss_pred chHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHH
Q 000909 8 NNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVM 87 (1230)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (1230)
..+.+++++.+++++. +...++++++..++....|++++.++|.+.... + ...+....+.++++.++..
T Consensus 125 ~~~~~~~~~~~~~~~~-~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~------~----~~~l~~l~~~~~~~~~~~~ 193 (694)
T TIGR01846 125 FGFSWFIPAIIRYRKQ-FREVLLISLALQLFALVTPLLFQVVIDKVLVHR------G----LSTLSVLALAMLAVAIFEP 193 (694)
T ss_pred CcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------C----hhHHHHHHHHHHHHHHHHH
Confidence 4567777777665443 334444455555555566688899999764320 1 1223333444455566677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000909 88 VVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISG 167 (1230)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~ 167 (1230)
++.+++.++..+.+.++..++|.++|+|++++|++||++ .++| ++++|+ +|++.+++++...+..++.++.++++.
T Consensus 194 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~-~~~g--~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~ 269 (694)
T TIGR01846 194 ALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFES-RRVG--DTVARV-RELEQIRNFLTGSALTVVLDLLFVVVF 269 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCC-CCHH--HHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999996 5656 999999 699999999988888888777777777
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHH
Q 000909 168 LAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDS 247 (1230)
Q Consensus 168 ~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~ 247 (1230)
++++++++|.+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+||.|+.+.++|++..++
T Consensus 270 ~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~ 349 (694)
T TIGR01846 270 LAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAA 349 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHH
Confidence 88999999999999999999998888888888889899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 248 TTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAAS 326 (1230)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ 326 (1230)
..+...+..+......... .+..+..++++|+|++++..|.+|+|.++++..+...+..|+..+...+..++++..+.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ 429 (694)
T TIGR01846 350 YVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALE 429 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888877777666555 555566777889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcC
Q 000909 327 RIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRF 406 (1230)
Q Consensus 327 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 406 (1230)
|+.++++.+++.+... ....+...+.|+++||+|+|++. ++++|+|+||+|+|||++||+|+||||||||+++|+|+
T Consensus 430 ri~~~l~~~~e~~~~~--~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~ 506 (694)
T TIGR01846 430 RLGDILNSPTEPRSAG--LAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRL 506 (694)
T ss_pred HHHHHHcCCCCccCCC--CCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 9999998765432211 11122335689999999999743 35699999999999999999999999999999999999
Q ss_pred CCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccch
Q 000909 407 YDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETK 486 (1230)
Q Consensus 407 ~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 486 (1230)
|+|++|+|++||+|+++++.+++|++|+||+|+|++|++||+|||.++.++.++++++++|+.++++++++++|+|+||.
T Consensus 507 ~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~ 586 (694)
T TIGR01846 507 YTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTE 586 (694)
T ss_pred CCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcE
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred hcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeC
Q 000909 487 VGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDN 566 (1230)
Q Consensus 487 ~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~ 566 (1230)
+|++|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.+++..+++|+|+||||+++++.||+|++|++
T Consensus 587 i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~ 666 (694)
T TIGR01846 587 VGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEK 666 (694)
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CeEEEecChhHHHhhcCcHHHHHHHHh
Q 000909 567 GCLVEIGTHNDLINRIDGHYAKMAKLQ 593 (1230)
Q Consensus 567 G~i~~~g~~~~l~~~~~~~~~~~~~~~ 593 (1230)
|++++.|+|+|++++ ++.|+++++.|
T Consensus 667 G~i~~~g~~~~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 667 GQIAESGRHEELLAL-QGLYARLWQQQ 692 (694)
T ss_pred CEEEEeCCHHHHHHc-CChHHHHHHhh
Confidence 999999999999985 89999998754
No 44
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.4e-79 Score=766.76 Aligned_cols=575 Identities=25% Similarity=0.348 Sum_probs=481.6
Q ss_pred Ccccccc-chHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHH
Q 000909 1 MRREKNK-NNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYF 79 (1230)
Q Consensus 1 ~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (1230)
||-++.. +.++++++|.+++++. +++.+++.++..++.+..|++++.++|.+.... +.. ......+.+.+
T Consensus 1 ~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~------~~~--~~~~~~~~~~~ 71 (592)
T PRK10790 1 MRSFSQLWPTLKRLLAYGSPWRKP-LGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKG------NLP--LGLVAGLAAAY 71 (592)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------Ccc--hhHHHHHHHHH
Confidence 4533332 3456666776655443 455666667767777777788999999754220 100 01111122233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHH
Q 000909 80 VYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVM 159 (1230)
Q Consensus 80 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~ 159 (1230)
+++.++..++.++..+.....+.++..++|.++|+++++.|+++|++ .++| ++++|+++|++.+++.+...+..++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~-~~~g--~~~~~~~~d~~~v~~~~~~~~~~~~~ 148 (592)
T PRK10790 72 VGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSAFDT-QPVG--QLISRVTNDTEVIRDLYVTVVATVLR 148 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CChh--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445566778888889999999999999999999999999999996 4556 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHH
Q 000909 160 NASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIID 239 (1230)
Q Consensus 160 ~~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~ 239 (1230)
.+..+++.++++++++|.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~ 228 (592)
T PRK10790 149 SAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGE 228 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHH
Confidence 99889999999999999999998888888877777788888888888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 240 RYEAILDSTTKLGIKQGTAKGLAV-GST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKY 317 (1230)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (1230)
+|.+..++..+...+.....++.. .+. .+..+...++.++++. +..|.+++|.++++..+......|+..+...+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~ 307 (592)
T PRK10790 229 RMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSM 307 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888877766665554432 222 2222222222223333 5789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHH
Q 000909 318 FTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKS 397 (1230)
Q Consensus 318 ~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKS 397 (1230)
++++..+.+|+.++++.+++..... ......++|+++||+|+|++ ++++|+|+||+|++||++||||+||||||
T Consensus 308 ~~~~~~s~~ri~~~l~~~~~~~~~~----~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKS 381 (592)
T PRK10790 308 LQQAVVAGERVFELMDGPRQQYGND----DRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKS 381 (592)
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCC----ccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHH
Confidence 9999999999999998654321111 11223467999999999974 34699999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHH
Q 000909 398 TAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIR 477 (1230)
Q Consensus 398 Tl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~ 477 (1230)
||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||++|++||+|||.+++ +.++++++++++.++++++++
T Consensus 382 TLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~ 460 (592)
T PRK10790 382 TLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELAR 460 (592)
T ss_pred HHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999997 678999999999999999999
Q ss_pred hCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc
Q 000909 478 QLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN 557 (1230)
Q Consensus 478 ~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~ 557 (1230)
++|+|+||.+|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+.+++..+++|+|+||||++.++.
T Consensus 461 ~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~ 540 (592)
T PRK10790 461 SLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVE 540 (592)
T ss_pred hccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999998788999999999999999
Q ss_pred cCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHHhhcc
Q 000909 558 ADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQRQF 596 (1230)
Q Consensus 558 ~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~ 596 (1230)
||+|++|++|++++.|+|+||+++ ++.|+++++.|...
T Consensus 541 ~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~l~~~~~~~ 578 (592)
T PRK10790 541 ADTILVLHRGQAVEQGTHQQLLAA-QGRYWQMYQLQLAG 578 (592)
T ss_pred CCEEEEEECCEEEEEcCHHHHHhC-CCHHHHHHHHHhhh
Confidence 999999999999999999999986 89999999876543
No 45
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.9e-79 Score=764.14 Aligned_cols=565 Identities=27% Similarity=0.416 Sum_probs=482.1
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 649 SFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYN 728 (1230)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1230)
.++++..+.++.++.+.+.+++.++........++++..+++..... .....+...++++.++..+..++..++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (588)
T PRK13657 6 LYARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGK------GDIFPLLAAWAGFGLFNIIAGVLVARH 79 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666666666666666666677777777777765432 111122223333333333334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 729 FAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWK 808 (1230)
Q Consensus 729 ~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 808 (1230)
..+...+...+++.++|++++++|..+|+ +.++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.
T Consensus 80 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (588)
T PRK13657 80 ADRLAHRRRLAVLTEYFERIIQLPLAWHS--QRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWR 157 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHC--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556666777999999999999997 6789999999999999999888777877777777778888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 809 LAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSW 888 (1230)
Q Consensus 809 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (1230)
++++++++.|+..++..+..+.......+..+..++..+.+.|.+.|+++||+||.++.+.+++++..++..+...+...
T Consensus 158 l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (588)
T PRK13657 158 LSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLS 237 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888887777777777776777777778889999999999999999999999999999999998888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000909 889 LAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQS 968 (1230)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~ 968 (1230)
.......+.+....+...+++++|++++.+|.+++|.++++..+...+..++..+...+..+..+..+++|+.++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~ 317 (588)
T PRK13657 238 WWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVP 317 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 77777777788888888899999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCC
Q 000909 969 LIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ 1048 (1230)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~ 1048 (1230)
+.+.. ....+..+..+.|+|+||+|+||++ +++|+|+||+++|||++||||+||||||||+++|+|+|+|++
T Consensus 318 ~~~~~------~~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~ 389 (588)
T PRK13657 318 DVRDP------PGAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQS 389 (588)
T ss_pred ccCCC------CCCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCC
Confidence 32211 0001111234679999999999742 469999999999999999999999999999999999999999
Q ss_pred CeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCC
Q 000909 1049 GSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERG 1128 (1230)
Q Consensus 1049 G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G 1128 (1230)
|+|++||+|+++++.+++|++|+||||||.+|+|||||||.+++|+.+|++++++++.+++++++.++|+|+||.+|++|
T Consensus 390 G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g 469 (588)
T PRK13657 390 GRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERG 469 (588)
T ss_pred CEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCC
Confidence 99999999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEE
Q 000909 1129 VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVE 1208 (1230)
Q Consensus 1129 ~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive 1208 (1230)
.+||||||||||||||++++|+|||||||||+||++||+.+.+.|++..+++|+|+||||++.++.||+|++|++|+++|
T Consensus 470 ~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~ 549 (588)
T PRK13657 470 RQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVE 549 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999998878999999999999999999999999999999
Q ss_pred ecCHhHHhhcccccHHHhhhc
Q 000909 1209 RGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1209 ~Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
.|+|++|+++++.|++|++.|
T Consensus 550 ~g~~~~l~~~~~~y~~l~~~~ 570 (588)
T PRK13657 550 SGSFDELVARGGRFAALLRAQ 570 (588)
T ss_pred eCCHHHHHHCCChHHHHHHHh
Confidence 999999999999999999865
No 46
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.8e-79 Score=756.82 Aligned_cols=564 Identities=25% Similarity=0.391 Sum_probs=486.8
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 650 FFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNF 729 (1230)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1230)
+++++++.+++++.+.+.+++.++...+.+..++.++.+++....... ...+...++++.++..+..++..++.
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD------VLPTLALWAGFGVFNTIAYVLVAREA 80 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777788877788888888888888888888888876553211 11122222223333444444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 730 AYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKL 809 (1230)
Q Consensus 730 ~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 809 (1230)
.....++..++|.++|++++++|++||+ ++++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.+
T Consensus 81 ~~~~~~~~~~lr~~~~~~l~~l~~~~~~--~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 158 (585)
T TIGR01192 81 DRLAHGRRATLLTEAFGRIISMPLSWHQ--QRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRL 158 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666667778999999999999998 67899999999999999999988888888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 810 AVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWL 889 (1230)
Q Consensus 810 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1230)
++++++++|+.++......+.......+..+..++..+.+.|.+.|+++||+||.++.+.+++++..++..+...+..+.
T Consensus 159 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (585)
T TIGR01192 159 SIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDW 238 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998988888777777776666666777788889999999999999999999999999999999888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 000909 890 AGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSL 969 (1230)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~ 969 (1230)
......+...+..+..++++++|++++..|.+++|.++++..+......++..+...+.++..+..+.+|+.++++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 318 (585)
T TIGR01192 239 WALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQ 318 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 77777777777778888899999999999999999999999998889999999999999999999999999999876543
Q ss_pred CCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCC
Q 000909 970 IPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQG 1049 (1230)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G 1049 (1230)
.+.. ..........+.|+|+||+|+|+++ .++|+|+||+|++||++|||||||||||||+++|+|+|+|++|
T Consensus 319 ~~~~------~~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G 390 (585)
T TIGR01192 319 REEP------ADAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG 390 (585)
T ss_pred ccCC------ccCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC
Confidence 2211 0001111234679999999999742 3589999999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCC
Q 000909 1050 SVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGV 1129 (1230)
Q Consensus 1050 ~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~ 1129 (1230)
+|++||+|+++++.+.+|++++||||||.+|++|+||||.+++|++++++++++++.+++++++.++|+|+||.+|++|.
T Consensus 391 ~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~ 470 (585)
T TIGR01192 391 QILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGN 470 (585)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEe
Q 000909 1130 QLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVER 1209 (1230)
Q Consensus 1130 ~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~ 1209 (1230)
+||||||||++|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~ 550 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEK 550 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred cCHhHHhhcccccHHHhhhc
Q 000909 1210 GTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1210 Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
|+|++|++++|.|+++|+.|
T Consensus 551 g~~~~l~~~~~~y~~l~~~~ 570 (585)
T TIGR01192 551 GSFQELIQKDGRFYKLLRRS 570 (585)
T ss_pred CCHHHHHHCCChHHHHHHhC
Confidence 99999999999999999876
No 47
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=9.8e-80 Score=758.45 Aligned_cols=522 Identities=22% Similarity=0.318 Sum_probs=446.9
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 654 LSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTY--SLIFCSLSLISLAFNLLQHYNFAY 731 (1230)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 731 (1230)
+++.+++++.+.+.+++..+........++.++.+++....... ....+ ...++++.++..++.++..++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (529)
T TIGR02868 5 LPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-----VLYLSVAAVAVRAFGIGRAVFRYLERLVGHD 79 (529)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555656666666666666666667777777765432110 11111 111223445566777888888889
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 732 MGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAV 811 (1230)
Q Consensus 732 ~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 811 (1230)
.+.++..++|.++|++++++|..||+ ++++|++++|+++|++.++..+...+..++..+..+++++++++.++|.+++
T Consensus 80 ~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 157 (529)
T TIGR02868 80 AALRSLGRLRVRVYDRLARLALAGRR--RFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAAL 157 (529)
T ss_pred HHHHHHHHHHHHHHHHhhccCccccc--cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999997 7789999999999999999999998888888888888999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 812 VMIAVQPLTILCF-YTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLA 890 (1230)
Q Consensus 812 ~~l~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (1230)
++++.+|++.++. ++..+..+...++.++..++..+.+.|.+.|+++||+|+.|+.+.++|++..++..+...+..+..
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (529)
T TIGR02868 158 VLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARAT 237 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877765554 444444444455666677888899999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 000909 891 GIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLI 970 (1230)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~ 970 (1230)
+...++...+..+...+.+|+|++++..|.++.|.+.++..+......++..+...+..+.++..+.+|+.++++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~ 317 (529)
T TIGR02868 238 GLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPR 317 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 88888888888888888899999999999999999999999988899999999999999999999999999999876543
Q ss_pred CCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCe
Q 000909 971 PGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGS 1050 (1230)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1050 (1230)
+... .......++..++|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+
T Consensus 318 ~~~~----~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~ 391 (529)
T TIGR02868 318 PEGV----VPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGE 391 (529)
T ss_pred CCCC----CCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Confidence 3210 00011112234679999999999753 35999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCC
Q 000909 1051 VRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQ 1130 (1230)
Q Consensus 1051 I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~ 1130 (1230)
|++||+|++++ .+++|++|+||||||+||+|||||||++|+|+++||++++|++.++++++|.+||+||||++||+|.+
T Consensus 392 I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~ 470 (529)
T TIGR02868 392 VTLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGAR 470 (529)
T ss_pred EEECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCc
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCc
Q 000909 1131 LSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRL 1189 (1230)
Q Consensus 1131 LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl 1189 (1230)
||||||||||||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 471 LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 471 LSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999999999988999999999996
No 48
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=4.4e-79 Score=761.63 Aligned_cols=569 Identities=33% Similarity=0.516 Sum_probs=493.5
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 652 RLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAY 731 (1230)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (1230)
.++++.++.++.+.+.+++..+.+......++.+..+++..+.... ......+..+++++.++..++.+++.++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS---SGLLNRYFAFLLVVALVLALGTAARFYLVTW 84 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555666666666666666777777777765442211 1122233444455555666777888889999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 732 MGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAV 811 (1230)
Q Consensus 732 ~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 811 (1230)
.+.++..++|..+++++++.|..+|+ ..++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.+++
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFD--KNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTS 162 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHc--cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999997 5778999999999999999999888888888888888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 812 VMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAG 891 (1230)
Q Consensus 812 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (1230)
++++..|+.++..++..+......++..+..++..+.+.|.+.|+++||+++.++.+.++|++..++..+...+......
T Consensus 163 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (576)
T TIGR02204 163 LVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRA 242 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888887777777777777888888888889999999999999999999999999999999988887777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 000909 892 IGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIP 971 (1230)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~ 971 (1230)
....+...+.++..++.+++|++++..|.+++|.++++..+......++..+...+.++..+..+.+|+.++++.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 322 (576)
T TIGR02204 243 LLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIK 322 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCC
Confidence 55666666666777788889999999999999999999999999999999999999999999999999999998755422
Q ss_pred CCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeE
Q 000909 972 GSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSV 1051 (1230)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I 1051 (1230)
... . .....++..+.|+|+||+|+||+++++++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|
T Consensus 323 ~~~----~-~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I 397 (576)
T TIGR02204 323 APA----H-PKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRI 397 (576)
T ss_pred CCC----C-CccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 110 0 00111223467999999999986434579999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCC
Q 000909 1052 RVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQL 1131 (1230)
Q Consensus 1052 ~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~L 1131 (1230)
++||+|+++++.+++|++++|+||||++|+|||||||.+++|+.++++++++++.+++.++++++|+|+||++||+|.+|
T Consensus 398 ~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~L 477 (576)
T TIGR02204 398 LLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTL 477 (576)
T ss_pred EECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcC
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecC
Q 000909 1132 SGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1132 SgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt 1211 (1230)
|||||||++||||++++|+|||||||||+||++|++.+.+.+++..+++|+|+||||++.+..||+|++|++|+++|.|+
T Consensus 478 SgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~ 557 (576)
T TIGR02204 478 SGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGT 557 (576)
T ss_pred CHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeec
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred HhHHhhcccccHHHhhhcC
Q 000909 1212 YAQLTHMRGAFFNLATLQS 1230 (1230)
Q Consensus 1212 ~~eLl~~~g~y~~l~~~q~ 1230 (1230)
|++|+++++.|++|++.|.
T Consensus 558 ~~~l~~~~~~~~~l~~~~~ 576 (576)
T TIGR02204 558 HAELIAKGGLYARLARLQF 576 (576)
T ss_pred HHHHHHcCChHHHHHhhcC
Confidence 9999999999999998874
No 49
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-82 Score=688.33 Aligned_cols=492 Identities=29% Similarity=0.448 Sum_probs=430.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000909 727 YNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAM-IMGLVV 805 (1230)
Q Consensus 727 ~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~-~~~~~~ 805 (1230)
.+|..+++.+...+--+.|.|+..+++.|+- +..+|.+..-.......++..+...+...+..++-+...+ ++...+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl--~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHL--ERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhh--hcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 4677788899999999999999999999997 4456666655555555666666555555555555444333 445577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHH
Q 000909 806 AWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARK 885 (1230)
Q Consensus 806 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~ 885 (1230)
+|+.+.+.++++.++++++....-......++..++.++++....+++.+.+|+|.||.|+.+..+|++.++.+.+...+
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 89988888888877777766655555555677777888889999999999999999999999999999999999988777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000909 886 KSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILD 965 (1230)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~ 965 (1230)
.....+++......+......+....+...+..|.+|.|+++....++.....|+..+.....++.++...+++++++++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 65555555555555566666677777888899999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCCCcc-cccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 000909 966 RQSLIPGSSQAGDGTRGSKLQ-KISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFY 1044 (1230)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~-~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~ 1044 (1230)
.+.+.... +..++.+ -..|.|.|+||+|.|. |.+|+|+|+||++++|+++||||+||+||||+.++|+|||
T Consensus 242 ~~~~v~d~------pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFy 313 (497)
T COG5265 242 VEAEVSDA------PDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFY 313 (497)
T ss_pred cchhhccC------CCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHh
Confidence 87765433 1223334 3568999999999996 4568999999999999999999999999999999999999
Q ss_pred cCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccc
Q 000909 1045 DVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETEC 1124 (1230)
Q Consensus 1045 ~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~v 1124 (1230)
|+++|.|.|||+||+++..+++|+.||+||||.+||++|+..|+.||+|+++++|++.|++.+++++||+++|+||||.|
T Consensus 314 D~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~V 393 (497)
T COG5265 314 DVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGV 393 (497)
T ss_pred CCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCc
Q 000909 1125 GERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADG 1204 (1230)
Q Consensus 1125 ge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G 1204 (1230)
||+|-.||||||||+||||++|++|+||+||||||+||.+||++||.+|++..+|+|.++|||||+|+.+||.|+||++|
T Consensus 394 gerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g 473 (497)
T COG5265 394 GERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNG 473 (497)
T ss_pred chheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCHhHHhhcccccHHHhhh
Q 000909 1205 RVVERGTYAQLTHMRGAFFNLATL 1228 (1230)
Q Consensus 1205 ~Ive~Gt~~eLl~~~g~y~~l~~~ 1228 (1230)
+|+|.|+|+||++++|.|++||.+
T Consensus 474 ~i~erg~h~~ll~~~g~ya~mw~~ 497 (497)
T COG5265 474 RIVERGTHEELLAAGGLYAEMWRR 497 (497)
T ss_pred EEEecCcHHHHHHcCChHHHHhcC
Confidence 999999999999999999999963
No 50
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=7.5e-79 Score=759.34 Aligned_cols=564 Identities=33% Similarity=0.486 Sum_probs=499.5
Q ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000909 11 GIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVA 90 (1230)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 90 (1230)
++++++.++.+ ..++++++++++.+++.+..+++++.++|..... .. ...+......++++.++..++.
T Consensus 3 ~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~---~~~~~~~~~~~~~~~i~~~~~~ 71 (571)
T TIGR02203 3 RRLWSYVRPYK-AGLVLAGVAMILVAATESTLAALLKPLLDDGFGG-------RD---RSVLWWVPLVVIGLAVLRGICS 71 (571)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-------Cc---hhHHHHHHHHHHHHHHHHHHHH
Confidence 45666665554 3456777777777788888888888888864322 11 1122333334555666777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000909 91 FLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAF 170 (1230)
Q Consensus 91 ~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~ 170 (1230)
++..++..+.+.++...+|..+++++++.|.++|++ .+.| ++.+|+++|++.+++++.+.+..++.+++.+++.+++
T Consensus 72 ~~~~~~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~-~~~g--~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~ 148 (571)
T TIGR02203 72 FVSTYLLSWVSNKVVRDIRVRMFEKLLGLPVSFFDR-QPTG--TLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIV 148 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999986 4556 9999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHH
Q 000909 171 STYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTK 250 (1230)
Q Consensus 171 ~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~ 250 (1230)
+++++|.+++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||.++.|+.+.++|++..++..+
T Consensus 149 l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~ 228 (571)
T TIGR02203 149 LLYYSWQLTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRR 228 (571)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 251 LGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIF 329 (1230)
Q Consensus 251 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~ 329 (1230)
...+..+..+....+. .+..+..++++++|++++..|.+++|.++++..++..+..|+..+...+..++++..+.+|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~ 308 (571)
T TIGR02203 229 LAMKMTSAGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLF 308 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877777666655 555566677888999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 000909 330 DRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA 409 (1230)
Q Consensus 330 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~ 409 (1230)
++++.+++.+... ....+..++|+++||+|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+|+|
T Consensus 309 ~~l~~~~~~~~~~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~ 384 (571)
T TIGR02203 309 TLLDSPPEKDTGT---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEP 384 (571)
T ss_pred HHHcCCCCCCCCC---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC
Confidence 9998655432211 1112234679999999999754 35799999999999999999999999999999999999999
Q ss_pred CCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCC-CCCHHHHHHHHHHHhHHHHHHhCCCcccchhc
Q 000909 410 DDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKL-DATMDEVIAAATAANAHNFIRQLPEGYETKVG 488 (1230)
Q Consensus 410 ~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 488 (1230)
++|+|++||+++++++.+++|++|+||||+|++|++|++|||.++++ +.++++++++++.+++++++.++|+|+||.+|
T Consensus 385 ~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~ 464 (571)
T TIGR02203 385 DSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIG 464 (571)
T ss_pred CCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceec
Confidence 99999999999999999999999999999999999999999999986 78899999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCe
Q 000909 489 ERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGC 568 (1230)
Q Consensus 489 ~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~ 568 (1230)
++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+.|.+..+++|+|+||||++.+..||+|++|++|+
T Consensus 465 ~~g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~ 544 (571)
T TIGR02203 465 ENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGR 544 (571)
T ss_pred CCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred EEEecChhHHHhhcCcHHHHHHHHh
Q 000909 569 LVEIGTHNDLINRIDGHYAKMAKLQ 593 (1230)
Q Consensus 569 i~~~g~~~~l~~~~~~~~~~~~~~~ 593 (1230)
+++.|+|++++++ ++.|++++..+
T Consensus 545 i~~~g~~~~l~~~-~~~~~~~~~~~ 568 (571)
T TIGR02203 545 IVERGTHNELLAR-NGLYAQLHNMQ 568 (571)
T ss_pred EEeeCCHHHHHHc-CCHHHHHHHHh
Confidence 9999999999985 78898887654
No 51
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.1e-78 Score=757.37 Aligned_cols=567 Identities=30% Similarity=0.411 Sum_probs=479.7
Q ss_pred hHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 000909 9 NIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMV 88 (1230)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 88 (1230)
.+++++++.+++++ .+.+.++++++..++.+..|++++.++|.+... . ......+.++++.++..+
T Consensus 6 ~~~~l~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-------~------~~~~~~~~~~~~~~~~~~ 71 (588)
T PRK13657 6 LYARVLQYLGAEKR-LGILLAVANVLLAAATFAEPILFGRIIDAISGK-------G------DIFPLLAAWAGFGLFNII 71 (588)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------c------cHHHHHHHHHHHHHHHHH
Confidence 46677777765544 344555666666666666678889999976421 0 111112222223333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 000909 89 VAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGL 168 (1230)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~ 168 (1230)
..++..++..+...++..++|.++|+|++++|+.+|++ .++| ++++|+++|++.+.+.+...+..++..++.+++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-~~~g--~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (588)
T PRK13657 72 AGVLVARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQ-RGSG--RALHTLLRGTDALFGLWLEFMREHLATLVALVVLL 148 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCc-CChH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445555566666677779999999999999986 4555 99999999999999888878888888888888888
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHH
Q 000909 169 AFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDST 248 (1230)
Q Consensus 169 ~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~ 248 (1230)
+++++++|.+++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||.|+.++.+.++|.+..++.
T Consensus 149 ~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~ 228 (588)
T PRK13657 149 PLALFMNWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNL 228 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHH
Confidence 88999999999999998898888888888999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 249 TKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASR 327 (1230)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~r 327 (1230)
.+...+............ .+..+..++++++|++++..|.+++|.++++..++.....|+..+...+..+..+..+.+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~ 308 (588)
T PRK13657 229 LAAQMPVLSWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEE 308 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777766666555444 4455566677889999999999999999999999888999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC
Q 000909 328 IFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFY 407 (1230)
Q Consensus 328 i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~ 407 (1230)
+.++++.+++.+... .....+...+.|+++||+|+|+++ +++|+|+||+++|||+++|+|+||||||||+++|+|+|
T Consensus 309 i~~l~~~~~~~~~~~-~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~ 385 (588)
T PRK13657 309 FFEVEDAVPDVRDPP-GAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVF 385 (588)
T ss_pred HHHHhCCCcccCCCC-CCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCc
Confidence 999987654422111 111112234579999999999742 45999999999999999999999999999999999999
Q ss_pred CCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchh
Q 000909 408 DADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKV 487 (1230)
Q Consensus 408 ~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~ 487 (1230)
+|++|+|.+||+++++++.+++|++|+||||+|++|++||+|||.+++++.++++++++++.+++++++.++|+|+||.+
T Consensus 386 ~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i 465 (588)
T PRK13657 386 DPQSGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVV 465 (588)
T ss_pred CCCCCEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchh
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCC
Q 000909 488 GERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNG 567 (1230)
Q Consensus 488 ~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G 567 (1230)
|++|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.+++..+++|+|+||||++.++.||+|++|++|
T Consensus 466 ~~~g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G 545 (588)
T PRK13657 466 GERGRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNG 545 (588)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999887899999999999999999999999999
Q ss_pred eEEEecChhHHHhhcCcHHHHHHHHhhcc
Q 000909 568 CLVEIGTHNDLINRIDGHYAKMAKLQRQF 596 (1230)
Q Consensus 568 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~ 596 (1230)
++++.|+|++++++ ++.|++++..+...
T Consensus 546 ~i~~~g~~~~l~~~-~~~y~~l~~~~~~~ 573 (588)
T PRK13657 546 RVVESGSFDELVAR-GGRFAALLRAQGML 573 (588)
T ss_pred EEEEeCCHHHHHHC-CChHHHHHHHhhcc
Confidence 99999999999985 89999998866433
No 52
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.9e-79 Score=755.99 Aligned_cols=537 Identities=24% Similarity=0.379 Sum_probs=470.2
Q ss_pred HHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccc
Q 000909 680 TYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEE 759 (1230)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~ 759 (1230)
..++.++.+++........ ......|..+++++.++..++.++..++....+.+...++|.++|++++++|++||+
T Consensus 13 ~~p~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~-- 88 (569)
T PRK10789 13 IPPKVVGIIVDGVTEQHMT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYL-- 88 (569)
T ss_pred HHHHHHHHHHHHhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHc--
Confidence 3445566666654322111 112333445555555666777788888888899999999999999999999999997
Q ss_pred cCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000909 760 QNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMG-LVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNF 838 (1230)
Q Consensus 760 ~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~ 838 (1230)
++++|++++|+++|++.++..+...+..++..++..+++++++ +.++|.+++++++++|+..+..+...+...+..++.
T Consensus 89 ~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~ 168 (569)
T PRK10789 89 RHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLA 168 (569)
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999887777777777765555555544 589999999999998988888777777777777777
Q ss_pred HHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000909 839 VKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQK 918 (1230)
Q Consensus 839 ~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~ 918 (1230)
++..++..+.+.|.+.|+++||+|+.++.+.++|++..++..+...+..+..+....+......+..++.+++|++++..
T Consensus 169 ~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~ 248 (569)
T PRK10789 169 QAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVN 248 (569)
T ss_pred HHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 77778889999999999999999999999999999999988888888877777777777777777788889999999999
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEE
Q 000909 919 GQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVD 998 (1230)
Q Consensus 919 g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vs 998 (1230)
|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+.. . .+.++..++|+|+||+
T Consensus 249 g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~------~--~~~~~~~~~I~~~~v~ 320 (569)
T PRK10789 249 GSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDG------S--EPVPEGRGELDVNIRQ 320 (569)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC------C--CCCCCCCCcEEEEEEE
Confidence 9999999999999999999999999999999999999999999999875432211 0 0112234689999999
Q ss_pred EECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEccccc
Q 000909 999 FAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPV 1078 (1230)
Q Consensus 999 f~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~ 1078 (1230)
|+|+.. +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+++|++++||||||+
T Consensus 321 ~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 399 (569)
T PRK10789 321 FTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF 399 (569)
T ss_pred EECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCe
Confidence 999743 3569999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeccc
Q 000909 1079 IYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEAT 1158 (1230)
Q Consensus 1079 Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaT 1158 (1230)
+|++|+||||.+++++.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+||||||||
T Consensus 400 lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpt 479 (569)
T PRK10789 400 LFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDAL 479 (569)
T ss_pred eccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcc
Confidence 99999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHhhhc
Q 000909 1159 SALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1159 SaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
|+||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|++++|.|+++++.|
T Consensus 480 s~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 480 SAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 99999999999999999888999999999999999999999999999999999999999999999999876
No 53
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3e-78 Score=748.76 Aligned_cols=564 Identities=28% Similarity=0.359 Sum_probs=482.2
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 000909 10 IGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVV 89 (1230)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 89 (1230)
++++++|.+++++ .++++++++++..++.+..|++++.++|.+... .. .. ...+.++++.++..+.
T Consensus 7 ~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~-------~~-----~~-~~~~~~~~~~~~~~~~ 72 (585)
T TIGR01192 7 YVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSK-------SD-----VL-PTLALWAGFGVFNTIA 72 (585)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------cc-----HH-HHHHHHHHHHHHHHHH
Confidence 5677788776654 445667777777777778889999999976422 10 01 1111122233334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000909 90 AFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLA 169 (1230)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~ 169 (1230)
.++..++..++..++..++|.++|+|++++|++||++ .++| ++++|+++|++.+++.+...+..++..++++++.++
T Consensus 73 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~-~~~g--~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~ 149 (585)
T TIGR01192 73 YVLVAREADRLAHGRRATLLTEAFGRIISMPLSWHQQ-RGTS--NALHTLLRATETLFGLWLEFMRQHLATFVALFLLIP 149 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555556666666777789999999999999996 5556 999999999999999988888888888888888888
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHH
Q 000909 170 FSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTT 249 (1230)
Q Consensus 170 ~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~ 249 (1230)
+++.++|.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.+++++..++..
T Consensus 150 ~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~ 229 (585)
T TIGR01192 150 TAFAMDWRLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLL 229 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999999999999998888888999998889888999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 250 KLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRI 328 (1230)
Q Consensus 250 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri 328 (1230)
+...+..+..++...+. .+..+..++++++|++++..|.+++|.++++..+......|+..+...+..+..+..+.+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri 309 (585)
T TIGR01192 230 SAQYPVLDWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDF 309 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777766666555544 44455566778899999999999999999999998888899999999999999999999999
Q ss_pred HHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 000909 329 FDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD 408 (1230)
Q Consensus 329 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 408 (1230)
.++++.+++.++... ....+...+.|+++||+|+|+++ +++|+|+||+|++||++||+||||||||||+++|+|+++
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~ 386 (585)
T TIGR01192 310 FDLEDSVFQREEPAD-APELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYD 386 (585)
T ss_pred HHHHcCCccccCCcc-CCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCC
Confidence 999886543321111 11112234579999999999742 358999999999999999999999999999999999999
Q ss_pred CCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhc
Q 000909 409 ADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVG 488 (1230)
Q Consensus 409 ~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 488 (1230)
|++|+|.+||.++++++.+++|++++||+|+|++|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|
T Consensus 387 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~ 466 (585)
T TIGR01192 387 PTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVG 466 (585)
T ss_pred CCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhc
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCe
Q 000909 489 ERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGC 568 (1230)
Q Consensus 489 ~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~ 568 (1230)
++|.+||||||||++|||||+++|+++|||||||+||+++++.+.+.+.+..+++|+|+||||+++++.||+|++|++|+
T Consensus 467 ~~~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~ 546 (585)
T TIGR01192 467 ERGNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGR 546 (585)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999999998878999999999999999999999999999
Q ss_pred EEEecChhHHHhhcCcHHHHHHHHhh
Q 000909 569 LVEIGTHNDLINRIDGHYAKMAKLQR 594 (1230)
Q Consensus 569 i~~~g~~~~l~~~~~~~~~~~~~~~~ 594 (1230)
+++.|+|++++++ ++.|++++..+.
T Consensus 547 i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (585)
T TIGR01192 547 LIEKGSFQELIQK-DGRFYKLLRRSG 571 (585)
T ss_pred EEEECCHHHHHHC-CChHHHHHHhCc
Confidence 9999999999985 899999987653
No 54
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.2e-78 Score=748.71 Aligned_cols=524 Identities=23% Similarity=0.266 Sum_probs=444.6
Q ss_pred HHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000909 12 IIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAF 91 (1230)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 91 (1230)
+++++.+++++. +++.++++++..+.....|++++.++|..... .. . .........++++.++..++.+
T Consensus 3 ~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-------~~-~--~~~~~~~~~~~~~~~~~~~~~~ 71 (529)
T TIGR02868 3 RILPLLQPRTRR-LVVAILLGALALGSAVALLGVSAWLISRAAEM-------PP-V--LYLSVAAVAVRAFGIGRAVFRY 71 (529)
T ss_pred hHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------ch-h--HHHHHHHHHHHHHHHHHHHHHH
Confidence 566777666543 44555556666666666668889999865321 10 0 0011111112234455677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 000909 92 LEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFS 171 (1230)
Q Consensus 92 ~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~ 171 (1230)
+..++..+.+.++..++|.++|+|++++|.++|++ .++| ++++|+++|++.+++.+...+..++..++.+++.++++
T Consensus 72 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~-~~~g--~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l 148 (529)
T TIGR02868 72 LERLVGHDAALRSLGRLRVRVYDRLARLALAGRRR-FQTG--DLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAI 148 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccccc-CChh--hHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999996 5666 99999999999999999988999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHH
Q 000909 172 TYFSWRLSLVAFPTLLLLIIPGMIYG-KYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTK 250 (1230)
Q Consensus 172 ~~~~~~l~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~ 250 (1230)
++++|.+++++++.+|++.++...+. +..++..++.++..++..+.+.|.++|+++||+|++|+.+.++|++..++..+
T Consensus 149 ~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~ 228 (529)
T TIGR02868 149 ALLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLA 228 (529)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 99999999998888777666554444 44456667778888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 251 LGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIF 329 (1230)
Q Consensus 251 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~ 329 (1230)
...+..+..+...+.. .+..+..++++++|++++..|.++.|.++++..+......|+..+...+..++++..+.+|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~ 308 (529)
T TIGR02868 229 AERRAARATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIE 308 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887777666555 455556677778999999999999999999998888888899888888999999999999999
Q ss_pred HHhccCCCCCCCCCC-CcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 000909 330 DRIDRVPEIDGEDTK-GLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD 408 (1230)
Q Consensus 330 ~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 408 (1230)
++++.+++.+..... .....+..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+
T Consensus 309 ~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~ 386 (529)
T TIGR02868 309 EVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLD 386 (529)
T ss_pred HHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 999876543221111 11111234579999999999753 359999999999999999999999999999999999999
Q ss_pred CCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhc
Q 000909 409 ADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVG 488 (1230)
Q Consensus 409 ~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 488 (1230)
|++|+|.+||+|++++ .+++|++|+||||||++|++||+|||++|.+++++++++++++.++++++++++|+|+||.+|
T Consensus 387 p~~G~I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ig 465 (529)
T TIGR02868 387 PLQGEVTLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLG 465 (529)
T ss_pred CCCcEEEECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhc
Confidence 9999999999999999 999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCc
Q 000909 489 ERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKL 552 (1230)
Q Consensus 489 ~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l 552 (1230)
|+|.+||||||||||||||++++|+|||||||||+||+++|+.|++.+.+..+++|+|+||||+
T Consensus 466 e~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 466 EGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred cccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999988899999999995
No 55
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.4e-77 Score=748.07 Aligned_cols=569 Identities=34% Similarity=0.516 Sum_probs=488.5
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 000909 10 IGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVV 89 (1230)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 89 (1230)
++.++++.+++++ .+.+.+++.++.+++....|++++.++|...... +. ........+++++.++..++
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~ 74 (576)
T TIGR02204 6 LAALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKD------SS----GLLNRYFAFLLVVALVLALG 74 (576)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc------cH----HHHHHHHHHHHHHHHHHHHH
Confidence 4556666655544 3445666666677777777788999999743210 11 11222233334444455667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000909 90 AFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLA 169 (1230)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~ 169 (1230)
.++..++..+.+.++..++|..++++++++|.++|++ .+.| ++++|+++|++.+++++...+..++..++.+++.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~-~~~g--~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~ 151 (576)
T TIGR02204 75 TAARFYLVTWLGERVVADIRRAVFAHLISLSPSFFDK-NRSG--EVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLI 151 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcc-CCcc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888899999999999999999999999999986 5566 999999999999999998888888999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHH
Q 000909 170 FSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTT 249 (1230)
Q Consensus 170 ~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~ 249 (1230)
++++++|.+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||.|+.|+.+.++|++..++..
T Consensus 152 ~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ 231 (576)
T TIGR02204 152 MMFITSPKLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAY 231 (576)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHH
Confidence 99999999999998888888888888999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 250 KLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRI 328 (1230)
Q Consensus 250 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri 328 (1230)
+...+............ .+.....++++++|++++..|.+++|.++++..+......|+..+...+..+.++..+.+|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri 311 (576)
T TIGR02204 232 EAARQRIRTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERL 311 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777666655544443 34445556677889999999999999999999999988999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 000909 329 FDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD 408 (1230)
Q Consensus 329 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 408 (1230)
.++++.+++.+..........+..+.|+++||+|+|++++++++|+|+||+++|||+++|+|+||||||||+++|+|+|+
T Consensus 312 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~ 391 (576)
T TIGR02204 312 IELLQAEPDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYD 391 (576)
T ss_pred HHHhCCCCcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccC
Confidence 99998654422111111111122457999999999985433579999999999999999999999999999999999999
Q ss_pred CCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhc
Q 000909 409 ADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVG 488 (1230)
Q Consensus 409 ~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 488 (1230)
|++|+|++||.++++++.+++|++|+||||+|++|++||+|||.++.++.++++++++++.+++.++++++|+|++|.+|
T Consensus 392 p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~ 471 (576)
T TIGR02204 392 PQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLG 471 (576)
T ss_pred CCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeC
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCe
Q 000909 489 ERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGC 568 (1230)
Q Consensus 489 ~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~ 568 (1230)
++|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.+++..+++|+|+||||++.++.||+|++|++|+
T Consensus 472 ~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~ 551 (576)
T TIGR02204 472 ERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGR 551 (576)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999999999878999999999999999999999999999
Q ss_pred EEEecChhHHHhhcCcHHHHHHHHh
Q 000909 569 LVEIGTHNDLINRIDGHYAKMAKLQ 593 (1230)
Q Consensus 569 i~~~g~~~~l~~~~~~~~~~~~~~~ 593 (1230)
+++.|+|++++++ ++.|++++..|
T Consensus 552 ~~~~g~~~~l~~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 552 IVAQGTHAELIAK-GGLYARLARLQ 575 (576)
T ss_pred EEeeecHHHHHHc-CChHHHHHhhc
Confidence 9999999999985 88999987654
No 56
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=8.3e-78 Score=744.16 Aligned_cols=538 Identities=28% Similarity=0.372 Sum_probs=467.7
Q ss_pred HHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 000909 41 CLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQE 120 (1230)
Q Consensus 41 ~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~ 120 (1230)
+.|++++.++|.+... ... ......+..+++++.++..++.++..++....+.++..++|.++|+|++++|
T Consensus 13 ~~p~~~~~iid~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 13 IPPKVVGIIVDGVTEQ-------HMT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred HHHHHHHHHHHHhccC-------Ccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3446788899865321 100 0112233333444455666778888888889999999999999999999999
Q ss_pred chhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 121 VGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFS-TYFSWRLSLVAFPTLLLLIIPGMIYGKY 199 (1230)
Q Consensus 121 ~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~l~~~~~~~~~~~~~~~~~~~ 199 (1230)
+++|++ .++| ++++|+++|++.++..+...+..++..++.++++++++ ++++|.+++++++++|+++++...+.++
T Consensus 84 ~~~~~~-~~~g--~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~ 160 (569)
T PRK10789 84 PEFYLR-HRTG--DLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQ 160 (569)
T ss_pred HHHHcC-CCHH--HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999986 4555 99999999999999888777777887766666665555 5899999999999999988888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 000909 200 LIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAW 278 (1230)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 278 (1230)
..+..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+..+...... ....+..+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (569)
T PRK10789 161 LHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIG 240 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988888888777776655544 344445566778
Q ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccCCccccEEEE
Q 000909 279 YGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFE 358 (1230)
Q Consensus 279 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 358 (1230)
+|++++..|.+++|.++++..+......|+..+...+..++.+..+.+|+.++++.+++.+... ...+...+.|+++
T Consensus 241 ~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~ 317 (569)
T PRK10789 241 GGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVN 317 (569)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEE
Confidence 8999999999999999999999999999999999999999999999999999998654432211 1112234679999
Q ss_pred EEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEcc
Q 000909 359 HVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQ 438 (1230)
Q Consensus 359 ~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q 438 (1230)
||+|+|+.. ++++|+|+||+++|||+++|+||||||||||+++|+|+|+|++|+|++||+++++++..++|++|+||+|
T Consensus 318 ~v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q 396 (569)
T PRK10789 318 IRQFTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQ 396 (569)
T ss_pred EEEEECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEcc
Confidence 999999753 3569999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000909 439 EHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLD 518 (1230)
Q Consensus 439 ~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlD 518 (1230)
+|++|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+||||||||++||||++++|+|+|||
T Consensus 397 ~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlD 476 (569)
T PRK10789 397 TPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILD 476 (569)
T ss_pred CCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 99999999999999998888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHHhhc
Q 000909 519 EATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQRQ 595 (1230)
Q Consensus 519 E~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 595 (1230)
||||+||+++++.+.+.+++..+++|+|+||||+++++.||+|++|++|++++.|+|++++++ ++.|++++..|..
T Consensus 477 Epts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 477 DALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred CccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 999999999999999999988789999999999999999999999999999999999999985 8899999987654
No 57
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-76 Score=667.11 Aligned_cols=553 Identities=24% Similarity=0.325 Sum_probs=452.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 22 ILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTS 101 (1230)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 101 (1230)
+..++++++++++..+....+....|++|..-... ..... -.+......+=++++.+.+..|.+.+..|...
T Consensus 15 ~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAia-------g~~~~-f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~At 86 (573)
T COG4987 15 KFGLLLGIVLAILTLLASIGLLTLSGWFISASAIA-------GLAYI-FNVMLPSAGVRGLAILRTAARYVERLVSHDAT 86 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhc-------cHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 44556777777666555544445667777643211 00000 11122223344567888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000909 102 ERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTYFSWRLSLV 181 (1230)
Q Consensus 102 ~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~ 181 (1230)
.++..++|.++|+++...+..-..+ .++| |+++|+..|++.+++.+-..+.+.+..+....+..+.+.+++|.+++.
T Consensus 87 frvL~~lRv~~f~kl~p~sp~~~~r-~r~g--dLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~All 163 (573)
T COG4987 87 FRVLSALRVRLFEKLEPLSPALLLR-YRSG--DLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALL 163 (573)
T ss_pred HHHHHHHHHHHHHhhccCChHHHHh-cChH--hHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 9999999999999999999888875 5666 999999999999999998888888888888888888888899998866
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 182 AFPT-LLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKG 260 (1230)
Q Consensus 182 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (1230)
+... +.+.+++...+.++-++..++.....+...+.+.|.+.|..+.+.||.++.+.+.+......+.+...|...+..
T Consensus 164 l~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~ 243 (573)
T COG4987 164 LGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTG 243 (573)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5433 344555666677777788888888888999999999999999999999999999999999999998888888887
Q ss_pred HHHHHH-HHHHHHHH-HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCC
Q 000909 261 LAVGST-GLSFAIWA-FLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSAL-PELKYFTEASIAASRIFDRIDRVPE 337 (1230)
Q Consensus 261 ~~~~~~-~~~~~~~~-~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~s~~ri~~~l~~~~~ 337 (1230)
+...+. .+..+..+ .++|.++ .+-.|..+......+.+.++....++..+. ..+....+...|+.|+.++.+++++
T Consensus 244 ~~~a~~~l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e 322 (573)
T COG4987 244 LSDAILLLIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPE 322 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcc
Confidence 776665 33222222 4455543 233455442222222222233333343344 4567788899999999999998776
Q ss_pred CCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEEC
Q 000909 338 IDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRID 417 (1230)
Q Consensus 338 ~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~ 417 (1230)
...+.+ .. +.....++++||||+||+. +.++|+|+||++++||++||+|+|||||||++++|.|.|+|++|+|.++
T Consensus 323 ~~~~~~--~~-~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~ 398 (573)
T COG4987 323 VTFPDE--QT-ATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLN 398 (573)
T ss_pred cCCCcc--cc-CCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeEC
Confidence 554311 11 1112279999999999965 5679999999999999999999999999999999999999999999999
Q ss_pred CeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChh
Q 000909 418 GVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGG 497 (1230)
Q Consensus 418 g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 497 (1230)
|.++..++.+.+|+.|++++|.+++|++|+|||+.+++|++++|+++++++.+++++++++.|+|++|.+||.|..||||
T Consensus 399 g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGG 478 (573)
T COG4987 399 GVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGG 478 (573)
T ss_pred CcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhH
Q 000909 498 QKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHND 577 (1230)
Q Consensus 498 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~ 577 (1230)
||||+||||+|++|+|++||||||.+||+.||+.+.+.+.+..+|||+|+||||+..++.||+|+|||+|+++|+|+|++
T Consensus 479 E~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~ 558 (573)
T COG4987 479 ERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAE 558 (573)
T ss_pred HHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcHHHHHHH
Q 000909 578 LINRIDGHYAKMAK 591 (1230)
Q Consensus 578 l~~~~~~~~~~~~~ 591 (1230)
|+.+ +|.|+++++
T Consensus 559 Ll~~-~g~~~~l~q 571 (573)
T COG4987 559 LLAN-NGRYKRLYQ 571 (573)
T ss_pred hhcc-ccHHHHHhc
Confidence 9995 999998864
No 58
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8e-77 Score=732.58 Aligned_cols=527 Identities=25% Similarity=0.358 Sum_probs=457.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 662 KQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIR 741 (1230)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (1230)
+.+.++++++++.+...+..++..+.+++....... . ......+.+.+++++++..++.+++.++....+.+...++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 3 RALALLGLLGALGALLIIAQAWLLARVIDGLISAGE-P-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-C-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334556666666777777778888888876532111 1 12233455556667777888899999999999999999999
Q ss_pred HHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 742 LRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTI 821 (1230)
Q Consensus 742 ~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~ 821 (1230)
.++|+++++.|..||+ ++++|++++|+++|++.++..+...+..++..++.+++++++++.++|.+++++++..|+..
T Consensus 81 ~~l~~~l~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~ 158 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQ--GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIP 158 (529)
T ss_pred HHHHHHHHhCCchhhc--cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999999997 68899999999999999999998888888888888888888899999999999988888887
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 822 LCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLT 901 (1230)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1230)
++.+...+......++..+..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766677776667777777788889999999999999999999999999999998888877777776666666666666
Q ss_pred HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCC
Q 000909 902 FMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTR 981 (1230)
Q Consensus 902 ~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~ 981 (1230)
.+...++..++++.+..|.+++|.++++..+......++..+...+..+.++..+.+|+.++++.+++.... .
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~-----~-- 311 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK-----A-- 311 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-----c--
Confidence 666666666677777799999999999888888888999999999999999999999999999854321110 0
Q ss_pred CCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCC
Q 000909 982 GSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVREL 1061 (1230)
Q Consensus 982 ~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i 1061 (1230)
..+.+..+.|+|+||+|+||++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|++++
T Consensus 312 -~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~ 389 (529)
T TIGR02857 312 -PVTAAPAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADA 389 (529)
T ss_pred -CCCCCCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhC
Confidence 0111123679999999999854 34799999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1062 DVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1062 ~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
+.+++|++++||||||.+|++||||||.++.++.+|+++++|++.++++++++++|+||||.+||+|.+||||||||++|
T Consensus 390 ~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~l 469 (529)
T TIGR02857 390 DADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLAL 469 (529)
T ss_pred CHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHH
Confidence 99999999999999999999999999999988899999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEE
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALV 1201 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl 1201 (1230)
|||++++|+|||||||||+||++||+.+++.+++..+++|+|+||||+++++.||+|+||
T Consensus 470 aRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 470 ARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999999988899999999999999999999986
No 59
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=5.3e-76 Score=725.30 Aligned_cols=523 Identities=24% Similarity=0.294 Sum_probs=452.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 25 MVLGTVGAIGDGMSTNCLLVFASRIMNSLG-FGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTSER 103 (1230)
Q Consensus 25 ~~~~~~~~~~~~~~~p~~~~~~~~~id~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 103 (1230)
++++++++++.++..+..|+++++++|.+. .. .. ...+..+..++++++++..++.++..++..+.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAG-------EP---LAELLPALGALALAVLLRALLGWLGERAAARAAAA 74 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-------CC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666667777777777889999999763 21 00 12233344445566667788899999999999999
Q ss_pred HHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000909 104 QVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTYFSWRLSLVAF 183 (1230)
Q Consensus 104 ~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~ 183 (1230)
+..++|.++|++++++|..+|++ .++| ++++|+++|++.+++.+...+..++..++.+++.++++++++|.++++++
T Consensus 75 ~~~~lr~~l~~~l~~~~~~~~~~-~~~g--~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l 151 (529)
T TIGR02857 75 VKSQLRERLLAAVAALGPGWLQG-RPSG--ELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILL 151 (529)
T ss_pred HHHHHHHHHHHHHHhCCchhhcc-CChH--HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999986 5556 99999999999999999988888898888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 184 PTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAV 263 (1230)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (1230)
+.+|+..++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+......
T Consensus 152 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (529)
T TIGR02857 152 LTAPLIPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSS 231 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877778888888888899999999999999999999999999999999999999999888888777666655544
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 000909 264 GST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPEIDGED 342 (1230)
Q Consensus 264 ~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 342 (1230)
... .+......++..++++.+..|.+++|.++++..+......|+..+...+..++++..+.+|+.++++.+++..+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~ 311 (529)
T TIGR02857 232 AVLELFATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA 311 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc
Confidence 443 3333333444455666777899999999999888888889999999999999999999999999998543221111
Q ss_pred CCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecC
Q 000909 343 TKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIR 422 (1230)
Q Consensus 343 ~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~ 422 (1230)
. ......+.|+++||+|+|+++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|++
T Consensus 312 --~-~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~ 387 (529)
T TIGR02857 312 --P-VTAAPAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLA 387 (529)
T ss_pred --C-CCCCCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehh
Confidence 1 111123579999999999853 346999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHH
Q 000909 423 RLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 423 ~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 502 (1230)
+++.+++|++|+||+|+|++|++||+|||.++.++.++++++++++.++++++++++|+|+||.+||+|.+||||||||+
T Consensus 388 ~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri 467 (529)
T TIGR02857 388 DADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRL 467 (529)
T ss_pred hCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHH
Confidence 99999999999999999999999999999999888889999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEE
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVV 564 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l 564 (1230)
+||||++++|+|+|||||||+||+++++.+.+.+.+..+++|+|+||||+++++.||+|++|
T Consensus 468 ~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 468 ALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999999999999988899999999999999999999986
No 60
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.3e-76 Score=792.42 Aligned_cols=507 Identities=21% Similarity=0.281 Sum_probs=438.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHH
Q 000909 77 LYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPI 156 (1230)
Q Consensus 77 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~ 156 (1230)
.++++++++..++.++..++..+.+.+...++|.++++++++.|++||++ +++| +++||+++|++.+++.+...+..
T Consensus 1009 ~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~-~~~G--~ilnR~s~Di~~id~~l~~~~~~ 1085 (1522)
T TIGR00957 1009 SVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER-TPSG--NLVNRFSKELDTVDSMIPPVIKM 1085 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc-CChH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666777778888888889999999999999999999999999996 5656 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHH
Q 000909 157 FVMNASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERR 236 (1230)
Q Consensus 157 ~~~~~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 236 (1230)
++..++.+++.++++++.+|.+++++++++++++++..++.+..+...+...+..+...+.+.|+++|+++||+|++|+.
T Consensus 1086 ~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~ 1165 (1522)
T TIGR00957 1086 FMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQER 1165 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHH
Confidence 99999999999998888888877776666666666666777777777777777888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-hcCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 237 IIDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVM-FKGETGGKIYAAGISFILSGLSLGSALPE 314 (1230)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 314 (1230)
+.+++.+..+...+..........+..... .+. ..++++.+...+. .+.+++|.+.+++.+...+..++..+...
T Consensus 1166 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~ 1242 (1522)
T TIGR00957 1166 FIHQSDLKVDENQKAYYPSIVANRWLAVRLECVG---NCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRM 1242 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887777655444444333222 111 1223334444443 47789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccc--CCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCC
Q 000909 315 LKYFTEASIAASRIFDRIDRVPEIDGEDTKGLVL--DEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGAS 392 (1230)
Q Consensus 315 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~s 392 (1230)
+..+..+..|++|+.++++.+++.+.......++ .+.+|.|+|+||+|+|+++ .+++|+|+||+|+|||++||||+|
T Consensus 1243 ~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrT 1321 (1522)
T TIGR00957 1243 SSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRT 1321 (1522)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCC
Confidence 9999999999999999997665432111111111 2356889999999999754 246999999999999999999999
Q ss_pred CCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhH
Q 000909 393 GSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANA 472 (1230)
Q Consensus 393 GsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~ 472 (1230)
|||||||+++|.|+|+|++|+|.+||+|+++++.+++|++|++|||||.||+|||||||.... +.++++++++++.+++
T Consensus 1322 GsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l 1400 (1522)
T TIGR00957 1322 GAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHL 1400 (1522)
T ss_pred CCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCc
Confidence 999999999999999999999999999999999999999999999999999999999998332 5789999999999999
Q ss_pred HHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCc
Q 000909 473 HNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKL 552 (1230)
Q Consensus 473 ~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l 552 (1230)
++++.++|+|+||.+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||+
T Consensus 1401 ~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl 1480 (1522)
T TIGR00957 1401 KTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRL 1480 (1522)
T ss_pred HHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred hhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHH
Q 000909 553 STVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKL 592 (1230)
Q Consensus 553 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 592 (1230)
+++.+||+|+|||+|+|+|.|+|+||+++ ++.|+++++.
T Consensus 1481 ~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~ 1519 (1522)
T TIGR00957 1481 NTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKD 1519 (1522)
T ss_pred HHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHH
Confidence 99999999999999999999999999996 7999999864
No 61
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.7e-75 Score=718.25 Aligned_cols=536 Identities=20% Similarity=0.293 Sum_probs=458.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 662 KQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIR 741 (1230)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (1230)
+.+...+++..+........++.+..+++....... ......+..+++++.++..++.+++.++....+.++..++|
T Consensus 6 ~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 6 STFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS---VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555556666777777775542111 11233345555566667778888899999999999999999
Q ss_pred HHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 742 LRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVAD-RVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLT 820 (1230)
Q Consensus 742 ~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~ 820 (1230)
.++|++++++|+.. .+...+++.+|++.++..+.. .+..++..++.++. +++++.++|.+++++++..|+.
T Consensus 83 ~~~~~~ll~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~ 154 (544)
T TIGR01842 83 QPIFAASFSATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVL 154 (544)
T ss_pred HHHHHHHhcCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999843 256788999999999988776 45555555555444 4567889999999888888877
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 821 ILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCL 900 (1230)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (1230)
++..++..+..++..++..+..++..+.+.|.++|+++||+||.++.+.++|++..++..+...+.....+....+...+
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666666666677777778888999999999999999999999999999999998888887777777777777777
Q ss_pred HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCC
Q 000909 901 TFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGT 980 (1230)
Q Consensus 901 ~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~ 980 (1230)
..+..++++++|++++..|.+|+|.++++..+......++..+...+.++..+..+.+|+.++++.+++.+..
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~------- 307 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA------- 307 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-------
Confidence 7778888899999999999999999999999999999999999999999999999999999999765542211
Q ss_pred CCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC
Q 000909 981 RGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE 1060 (1230)
Q Consensus 981 ~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1060 (1230)
.+.++..+.|+++||+|+||+. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++
T Consensus 308 --~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~ 384 (544)
T TIGR01842 308 --MPLPEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQ 384 (544)
T ss_pred --CCCCCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhh
Confidence 0111234679999999999743 3469999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1061 LDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1061 i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
++.+.+|++++||||||++|++|+||||.++++++++++++++++.++++++++++|+|+||.+|++|.+||||||||++
T Consensus 385 ~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~ 464 (544)
T TIGR01842 385 WDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIA 464 (544)
T ss_pred CCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHH
Confidence 99999999999999999999999999999887778999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||||++++|+|||||||||+||+++++.+.+.+++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||+++
T Consensus 465 lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 465 LARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred HHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 9999999999999999999999999999999999875 68999999999999999999999999999999999999864
No 62
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.8e-75 Score=782.94 Aligned_cols=513 Identities=22% Similarity=0.290 Sum_probs=408.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhH
Q 000909 75 CSLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKV 154 (1230)
Q Consensus 75 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~ 154 (1230)
+.+++++++++..++.+++.++..+.+.+...++|.+++++++++|++||++ +++| +++||+++|++.+++.+...+
T Consensus 955 ~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~-~~~G--~IlnR~s~Di~~id~~l~~~~ 1031 (1622)
T PLN03130 955 YNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT-NPLG--RIINRFAKDLGDIDRNVAVFV 1031 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc-CCch--HHHHHHHHHHHHHHHHHHHHH
Confidence 3444566677777888888889899999999999999999999999999997 5667 999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccH
Q 000909 155 PIFVMNASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAE 234 (1230)
Q Consensus 155 ~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 234 (1230)
..++..++.+++.++++++++|...+++++++.+++++..++.+..++..+......+...+.+.|+++|+++||+|+++
T Consensus 1032 ~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~ 1111 (1622)
T PLN03130 1032 NMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAY 1111 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHH
Confidence 89999888888888888888874333332222222233334445555555556666778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cc-----HHHHHHHHHHHHHHHHHH
Q 000909 235 RRIIDRYEAILDSTTKLGIKQGTAKGLAVGSTGLSFAIWAFLAWYGSHLVMFKG-ET-----GGKIYAAGISFILSGLSL 308 (1230)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~-----~g~~~~~~~~~~~~~~~l 308 (1230)
+++.+++.+..+...+..........+..... ..+...++++.+...+..+. .. .+.+..++.+......++
T Consensus 1112 ~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l--~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l 1189 (1622)
T PLN03130 1112 DRMAEINGRSMDNNIRFTLVNMSSNRWLAIRL--ETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLL 1189 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHH
Confidence 98877777666655443322221111111111 11111112222223233321 10 122222233444444556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCC--cccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEE
Q 000909 309 GSALPELKYFTEASIAASRIFDRIDRVPEIDGEDTKG--LVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSV 386 (1230)
Q Consensus 309 ~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~ 386 (1230)
..+......+..+..+++|+.++++.+++.+...+.. ....+.+|.|+|+||+|+|+++ .+++|+|+||+|+|||++
T Consensus 1190 ~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekV 1268 (1622)
T PLN03130 1190 TAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKV 1268 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEE
Confidence 6666667788999999999999998765533211111 1112346789999999999643 346999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHH
Q 000909 387 ALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAA 466 (1230)
Q Consensus 387 ~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~ 466 (1230)
||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|++|||||.||+|||||||.++. +.++++++++
T Consensus 1269 aIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~A 1347 (1622)
T PLN03130 1269 GIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWES 1347 (1622)
T ss_pred EEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999886 5789999999
Q ss_pred HHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEE
Q 000909 467 ATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTL 546 (1230)
Q Consensus 467 ~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i 546 (1230)
++.++++++++++|+|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|
T Consensus 1348 l~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI 1427 (1622)
T PLN03130 1348 LERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTML 1427 (1622)
T ss_pred HHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred EEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHHhh
Q 000909 547 VVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQR 594 (1230)
Q Consensus 547 ~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 594 (1230)
+||||++++.+||+|+||++|+|+|.|+|+||+++.++.|+++++.+.
T Consensus 1428 ~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1428 IIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred EEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 999999999999999999999999999999999865789999987654
No 63
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-77 Score=693.18 Aligned_cols=480 Identities=26% Similarity=0.398 Sum_probs=370.9
Q ss_pred cEEEEEEEEECCCCCC-CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC----CceEEECCeecCCCCHHH
Q 000909 354 EIEFEHVKFSYPSRPD-SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDAD----DGIVRIDGVDIRRLQLKW 428 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~----~G~i~~~g~~i~~~~~~~ 428 (1230)
-++++|++..|..... ..+++||||++.+||++||||+|||||||+++.|.|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975422 25899999999999999999999999999999999999987 899999999999888765
Q ss_pred Hh----hheEEEccCcc-ccch--hHHHHHh----cCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchh--cCCCCCCC
Q 000909 429 VR----REMGLVSQEHA-LFGT--SIKDNIM----FGKLDATMDEVIAAATAANAHNFIRQLPEGYETKV--GERGALLS 495 (1230)
Q Consensus 429 ~r----~~i~~v~Q~~~-l~~~--ti~~Ni~----~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~--~~~g~~LS 495 (1230)
+| +.|+||||+|. .+|. ||.+-|. .... .+.++. ...+.+.++.. |+.... ...+.+||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~-~~~~ea-----~~~a~elL~~V--gl~~~~~~~~yPheLS 156 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK-GSRAEA-----RKRAVELLEQV--GLPDPERRDRYPHQLS 156 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc-ccHHHH-----HHHHHHHHHHc--CCCChhhhccCCcccC
Confidence 43 57999999985 4543 6666554 2111 112211 12223344443 443322 55889999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEe
Q 000909 496 GGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEI 572 (1230)
Q Consensus 496 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~ 572 (1230)
||||||+.||+||+.+|++||+||||++||+.++.+|.+.|+++. .|.++|+|||++..+.+ ||||+||++|+++|.
T Consensus 157 GG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~ 236 (539)
T COG1123 157 GGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVET 236 (539)
T ss_pred chHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999999865 68999999999999977 999999999999999
Q ss_pred cChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHH
Q 000909 573 GTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFR 652 (1230)
Q Consensus 573 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (1230)
|+.+++++++...|.+..-.....
T Consensus 237 G~~~~i~~~p~hpYT~~Ll~a~p~-------------------------------------------------------- 260 (539)
T COG1123 237 GPTEEILSNPQHPYTRGLLAAVPR-------------------------------------------------------- 260 (539)
T ss_pred cCHHHHHhccCCcccHHHHhhCCC--------------------------------------------------------
Confidence 999999886443333211000000
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 653 LLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYM 732 (1230)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (1230)
T Consensus 261 -------------------------------------------------------------------------------- 260 (539)
T COG1123 261 -------------------------------------------------------------------------------- 260 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 733 GGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVV 812 (1230)
Q Consensus 733 ~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~ 812 (1230)
.+....
T Consensus 261 -----------------------~~~~~~--------------------------------------------------- 266 (539)
T COG1123 261 -----------------------LGDEKI--------------------------------------------------- 266 (539)
T ss_pred -----------------------cccccc---------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 813 MIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGI 892 (1230)
Q Consensus 813 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (1230)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCC
Q 000909 893 GMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPG 972 (1230)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~ 972 (1230)
..
T Consensus 267 ------------------------------------------------------------------------------~~ 268 (539)
T COG1123 267 ------------------------------------------------------------------------------IR 268 (539)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred CCCCCCCCCCCCcccccCcEEEEEEEEECCCCC--------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 000909 973 SSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRP--------DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFY 1044 (1230)
Q Consensus 973 ~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~--------~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~ 1044 (1230)
. . ...+.+...-++++|++.+|..+. ...+++||||++++||++||||+||||||||.++|+|+.
T Consensus 269 ~------~-~~~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~ 341 (539)
T COG1123 269 L------P-RRGPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLL 341 (539)
T ss_pred c------c-cccccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 0 0 000000112378999999997421 235899999999999999999999999999999999999
Q ss_pred cCCCCeEEECCee--cCCCChHHHhhcceEEcccccC--C-cccHHHHhccCC---CCC----CHHHHHHHHHHhchHHH
Q 000909 1045 DVEQGSVRVDGMD--VRELDVHWYRKHTALVSQEPVI--Y-AGNIRDNIVFGK---LDA----SENEVVEAARAANAHEF 1112 (1230)
Q Consensus 1045 ~p~~G~I~idG~d--i~~i~~~~lR~~i~~VpQdp~L--f-~gTIreNl~~g~---~~~----sd~ei~~al~~a~l~~~ 1112 (1230)
+|++|+|.++|.| .+.-....+|+++-+|+|||+- - ..||+++|.-.- ... ..+.+.+.++.+++..-
T Consensus 342 ~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~ 421 (539)
T COG1123 342 PPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPE 421 (539)
T ss_pred CCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHH
Confidence 9999999999977 3333356688999999999963 2 469999986221 011 11234455666665431
Q ss_pred HHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCch
Q 000909 1113 ISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLN 1190 (1230)
Q Consensus 1113 i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ 1190 (1230)
.+......||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|.++.+ |.|.|+|||+++
T Consensus 422 ----------~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~ 491 (539)
T COG1123 422 ----------FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLA 491 (539)
T ss_pred ----------HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH
Confidence 23455678999999999999999999999999999999999999999999988753 799999999999
Q ss_pred hhhh-cCEEEEEeCcEEEEecCHhHHhhc-ccccHHHh
Q 000909 1191 TIKK-LDSIALVADGRVVERGTYAQLTHM-RGAFFNLA 1226 (1230)
Q Consensus 1191 ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~-~g~y~~l~ 1226 (1230)
.++. ||||+||++|+|||.|+.+++.++ +..|-+..
T Consensus 492 vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L 529 (539)
T COG1123 492 VVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKL 529 (539)
T ss_pred HHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHH
Confidence 9985 799999999999999999999988 66676643
No 64
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.4e-74 Score=712.96 Aligned_cols=531 Identities=21% Similarity=0.297 Sum_probs=452.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 26 VLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTSERQV 105 (1230)
Q Consensus 26 ~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 105 (1230)
++.++++++..+.....|+++++++|...... +. ..+..+.+.++++.++..++.++..++..+.+.++.
T Consensus 9 ~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~------~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (544)
T TIGR01842 9 IIVGLFSFVINILMLAPPLYMLQVYDRVLTSG------SV----PTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLD 78 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC------ch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555555555678899999654210 11 123333444445556667888899999999999999
Q ss_pred HHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000909 106 VKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSE-KVPIFVMNASVFISGLAFSTYFSWRLSLVAFP 184 (1230)
Q Consensus 106 ~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~ 184 (1230)
.++|.++|+|++++|+.. .+ +..+++++|++.+++.+.. .+..++..++.++ .++++++++|.+++++++
T Consensus 79 ~~lr~~~~~~ll~~~~~~------~~--~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~ 149 (544)
T TIGR01842 79 GALNQPIFAASFSATLRR------GK--IDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALG 149 (544)
T ss_pred HHHHHHHHHHHhcCcccC------cc--chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHH
Confidence 999999999999999832 23 5688899999999998876 4444555444444 456789999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 185 TLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAVG 264 (1230)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (1230)
.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+..+....
T Consensus 150 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (544)
T TIGR01842 150 GAVVLVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSN 229 (544)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777777788888888889999999999999999999999999999999999999999988888777776666555
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 000909 265 ST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPEIDGEDT 343 (1230)
Q Consensus 265 ~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~ 343 (1230)
.. .+.....++++++|++++..|.+|+|.++++..++.....|+..+...+..++++..+.+|+.++++.+++.+..
T Consensus 230 ~~~~~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-- 307 (544)
T TIGR01842 230 LSKYFRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-- 307 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC--
Confidence 44 444455567778999999999999999999999999999999999999999999999999999999765443211
Q ss_pred CCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC
Q 000909 344 KGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR 423 (1230)
Q Consensus 344 ~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~ 423 (1230)
...+...+.|+++||+|+|++. ++++|+|+||+++|||+++|+||||||||||+++|+|+++|++|+|.+||+++.+
T Consensus 308 --~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~ 384 (544)
T TIGR01842 308 --MPLPEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQ 384 (544)
T ss_pred --CCCCCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhh
Confidence 1112234679999999999743 3569999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHH
Q 000909 424 LQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIA 503 (1230)
Q Consensus 424 ~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~ 503 (1230)
++.+++|+.++||||+|++|++|++|||.++.++.++++++++++.++++++++++|+|++|.+|++|.+||||||||++
T Consensus 385 ~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~ 464 (544)
T TIGR01842 385 WDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIA 464 (544)
T ss_pred CCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHH
Confidence 99999999999999999999999999999877778899999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHh
Q 000909 504 IARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 504 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
||||++++|+++|||||||+||+++++.+.+.+.+.. +++|+|+||||++.+..||+|++|++|++++.|+|+|+++
T Consensus 465 lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 465 LARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999999999999999998875 6899999999999999999999999999999999999875
No 65
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.2e-74 Score=770.17 Aligned_cols=509 Identities=20% Similarity=0.258 Sum_probs=422.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHH
Q 000909 81 YLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMN 160 (1230)
Q Consensus 81 ~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~ 160 (1230)
++.++..++.++..+.....+.+...++|.++++++++.|+.||++ +++| +++||+++|++.+++.+...+..++..
T Consensus 1006 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~-~~~G--~ilnR~s~Di~~id~~l~~~l~~~~~~ 1082 (1560)
T PTZ00243 1006 GIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT-TPLG--RILNRFSRDIDILDNTLPMSYLYLLQC 1082 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC-CCcc--HHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3333444444555555556677778899999999999999999997 6667 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHH
Q 000909 161 ASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDR 240 (1230)
Q Consensus 161 ~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 240 (1230)
++.+++.++++++.+|.+.+++++++.++..+..++.+..+...+......+...+.+.|+++|+++||+|+.|+.+.++
T Consensus 1083 ~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~ 1162 (1560)
T PTZ00243 1083 LFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQE 1162 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHH
Confidence 99999999999988885544444333344444555666667777777778889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH--HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 241 YEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSH--LVMFKGETGGKIYAAGISFILSGLSLGSALPELKY 317 (1230)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~--~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (1230)
|.+..+...+...+......+..... ++..+...++.+++.. +...+.+++|.+..++.+...+..++..+...+..
T Consensus 1163 ~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~ 1242 (1560)
T PTZ00243 1163 ALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVAT 1242 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888877666544444433322 2222222222233322 22334568888877778878888899999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCC------------------------CCC-c----ccCCccccEEEEEEEEECCCCC
Q 000909 318 FTEASIAASRIFDRIDRVPEIDGED------------------------TKG-L----VLDEVRGEIEFEHVKFSYPSRP 368 (1230)
Q Consensus 318 ~~~~~~s~~ri~~~l~~~~~~~~~~------------------------~~~-~----~~~~~~~~i~~~~v~~~y~~~~ 368 (1230)
+..++.+++|+.++++..++++... ... . +.++..|.|+|+||+|+|+++
T Consensus 1243 le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~- 1321 (1560)
T PTZ00243 1243 VEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG- 1321 (1560)
T ss_pred HHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-
Confidence 9999999999999997543321000 000 0 011235789999999999753
Q ss_pred CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHH
Q 000909 369 DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIK 448 (1230)
Q Consensus 369 ~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~ 448 (1230)
.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++||||||||.||+||||
T Consensus 1322 ~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIr 1401 (1560)
T PTZ00243 1322 LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVR 1401 (1560)
T ss_pred CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHH
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC-CCEEEEeCCCCCCCHH
Q 000909 449 DNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN-PVILLLDEATSALDSE 527 (1230)
Q Consensus 449 ~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~-~~illlDE~ts~lD~~ 527 (1230)
|||..+. +.+++++++|++.+++++++.++|+|+||.+||+|.+|||||||||||||||+++ |+|||||||||+||++
T Consensus 1402 eNIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~ 1480 (1560)
T PTZ00243 1402 QNVDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPA 1480 (1560)
T ss_pred HHhCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHH
Confidence 9998653 6789999999999999999999999999999999999999999999999999996 8999999999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHHhh
Q 000909 528 SETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQR 594 (1230)
Q Consensus 528 ~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 594 (1230)
|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++.++.|+++++.+.
T Consensus 1481 te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1481 LDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 9999999999988899999999999999999999999999999999999999866899999987643
No 66
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.5e-74 Score=773.19 Aligned_cols=515 Identities=21% Similarity=0.289 Sum_probs=412.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhh
Q 000909 74 KCSLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEK 153 (1230)
Q Consensus 74 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~ 153 (1230)
.+...+++++++..++.+++.++....+.+...++|.+++++++++|++||++ +++| +++||+++|++.+++.+...
T Consensus 951 ~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~-~~~G--~ilnr~s~Di~~id~~l~~~ 1027 (1495)
T PLN03232 951 FYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT-NPTG--RVINRFSKDIGDIDRNVANL 1027 (1495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc-CCch--HHHHHhHhhHHHHHHHHHHH
Confidence 34455666777777888889999999999999999999999999999999996 5666 99999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcc
Q 000909 154 VPIFVMNASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSA 233 (1230)
Q Consensus 154 ~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 233 (1230)
+..++..++.+++.+++++.+++...++++++..++++...++.+..+...+......+...+.+.|+++|+++||+|++
T Consensus 1028 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~ 1107 (1495)
T PLN03232 1028 MNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKA 1107 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCc
Confidence 88888888888888888777775433332222222222233333445556666677778889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCc----c-HHHHHHHHHHHHHHHHH
Q 000909 234 ERRIIDRYEAILDSTTKLGIKQGTAKGLAVGSTGLSFAIWAFLAWYGSHLVMF-KGE----T-GGKIYAAGISFILSGLS 307 (1230)
Q Consensus 234 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~----~-~g~~~~~~~~~~~~~~~ 307 (1230)
++++.+++++..+...+..........+... .+......++.+.+...+.. +.+ . .+.+..++.+......+
T Consensus 1108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 1185 (1495)
T PLN03232 1108 YDRMAKINGKSMDNNIRFTLANTSSNRWLTI--RLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTL 1185 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 9988887777666555543332222221111 11111112222223333332 221 1 12222234455556667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCC--cccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCE
Q 000909 308 LGSALPELKYFTEASIAASRIFDRIDRVPEIDGEDTKG--LVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKS 385 (1230)
Q Consensus 308 l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~ 385 (1230)
+..+...+..++.+..+++|+.++++.+++.+...... ....+.+|.|+|+||+|+|+++ .+++|+|+||+|+|||+
T Consensus 1186 l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~Gek 1264 (1495)
T PLN03232 1186 LSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEK 1264 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCE
Confidence 78888888999999999999999998766533211111 1112345789999999999643 35699999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHH
Q 000909 386 VALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIA 465 (1230)
Q Consensus 386 ~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~ 465 (1230)
+|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|++|||||.||+|||||||.+++ +.+++++++
T Consensus 1265 vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~ 1343 (1495)
T PLN03232 1265 VGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWE 1343 (1495)
T ss_pred EEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875 678999999
Q ss_pred HHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeE
Q 000909 466 AATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTT 545 (1230)
Q Consensus 466 ~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~ 545 (1230)
+++.++++++++++|+|+||.+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+
T Consensus 1344 al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~Tv 1423 (1495)
T PLN03232 1344 ALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTM 1423 (1495)
T ss_pred HHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred EEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHHhhc
Q 000909 546 LVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQRQ 595 (1230)
Q Consensus 546 i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 595 (1230)
|+||||++++.+||+|+||++|+|+|.|+|+||+++.++.|+++++.+..
T Consensus 1424 I~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1424 LVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred EEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 99999999999999999999999999999999998645699999876543
No 67
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.6e-76 Score=640.44 Aligned_cols=490 Identities=33% Similarity=0.446 Sum_probs=420.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHH-HHHHHHHHHH
Q 000909 95 YCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASV-FISGLAFSTY 173 (1230)
Q Consensus 95 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~-~i~~~~~~~~ 173 (1230)
.++...++.....+-.+.|.|+.++++.|+-++.+.|....+.|=++.++.+-.. .+...+..++- ...+.++...
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~---~l~~i~P~~~Ei~l~~vi~~~~ 80 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRW---ILFNILPTLVEISLVAVILWRV 80 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHH---HHHHhhHHHHHHHHHHHHHHhh
Confidence 3456677778888888999999999999998743333333444444445544443 33333333332 2334455667
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000909 174 FSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGI 253 (1230)
Q Consensus 174 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 253 (1230)
++|+.+++.++++.+++++............++..++-++.++...+++-+..+||.|+.|+.+..+|+..++.+.+...
T Consensus 81 ~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~ 160 (497)
T COG5265 81 YGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAI 160 (497)
T ss_pred cccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHH
Confidence 89999999998888888877777766677777888888899999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000909 254 KQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRI 332 (1230)
Q Consensus 254 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 332 (1230)
|.....++..... .+...........+...+..|.+|+|+++....++.+...|+..+......+.++..-+++.++.+
T Consensus 161 k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 161 KVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 8655444433322 444444556666777778899999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcccC-CccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000909 333 DRVPEIDGEDTKGLVLD-EVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADD 411 (1230)
Q Consensus 333 ~~~~~~~~~~~~~~~~~-~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 411 (1230)
+.+.+..+... .++.. ...|.+.|+||+|.|.. .+++|+|+||++++|+++|+|||||+||||++++|.|||++++
T Consensus 241 ~~~~~v~d~pd-a~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~s 317 (497)
T COG5265 241 DVEAEVSDAPD-APPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNS 317 (497)
T ss_pred ccchhhccCCC-CccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcC
Confidence 87766544322 12222 34578999999999964 5689999999999999999999999999999999999999999
Q ss_pred ceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCC
Q 000909 412 GIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERG 491 (1230)
Q Consensus 412 G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 491 (1230)
|.|.+||+|+++...+++|+.||+||||..||++|+..||.+|+|+++++|+..+++.++++++|+++|+||+|.+||+|
T Consensus 318 G~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerg 397 (497)
T COG5265 318 GSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERG 397 (497)
T ss_pred ceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEE
Q 000909 492 ALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVE 571 (1230)
Q Consensus 492 ~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 571 (1230)
-.||||||||+||||+++++|+||+|||+|||||.+||+.|+.+|++..+|+|.++|+|||+++-+||.|+||++|+|+|
T Consensus 398 lklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~e 477 (497)
T COG5265 398 LKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVE 477 (497)
T ss_pred eeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHHhhcCcHHHHHHH
Q 000909 572 IGTHNDLINRIDGHYAKMAK 591 (1230)
Q Consensus 572 ~g~~~~l~~~~~~~~~~~~~ 591 (1230)
.|+|+||+++ +|.|++||.
T Consensus 478 rg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 478 RGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred cCcHHHHHHc-CChHHHHhc
Confidence 9999999996 999999984
No 68
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-74 Score=717.70 Aligned_cols=497 Identities=23% Similarity=0.359 Sum_probs=367.9
Q ss_pred cEEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecC----------
Q 000909 354 EIEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIR---------- 422 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~---------- 422 (1230)
-|+++|++++|+... +.++|+||||++++||++|||||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 589999999996321 246999999999999999999999999999999999999999999999997552
Q ss_pred CCCHH---HHh-hheEEEccCc--cccc-hhHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCccc---chhcC
Q 000909 423 RLQLK---WVR-REMGLVSQEH--ALFG-TSIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYE---TKVGE 489 (1230)
Q Consensus 423 ~~~~~---~~r-~~i~~v~Q~~--~l~~-~ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~ 489 (1230)
+.+.. .+| ++||||+|+| .+++ .||+||+.++.. ..+..+.. ..+.+.++.+ |+. .....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~ 164 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQV--RIPEAQTILSR 164 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChhhHHhC
Confidence 12222 233 4799999998 5776 499999987521 11222211 2233445555 663 35677
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeC
Q 000909 490 RGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDN 566 (1230)
Q Consensus 490 ~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~ 566 (1230)
...+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.++++. .|+|+|+|||+++.+.. ||+|++|++
T Consensus 165 ~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~ 244 (623)
T PRK10261 165 YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQ 244 (623)
T ss_pred CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeC
Confidence 889999999999999999999999999999999999999999999999864 38999999999999865 999999999
Q ss_pred CeEEEecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCC
Q 000909 567 GCLVEIGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYL 646 (1230)
Q Consensus 567 G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (1230)
|++++.|+++++.......|.+.... .... . .. .
T Consensus 245 G~i~~~g~~~~~~~~~~~~~~~~l~~----~~~~------~------~~----~-------------------------- 278 (623)
T PRK10261 245 GEAVETGSVEQIFHAPQHPYTRALLA----AVPQ------L------GA----M-------------------------- 278 (623)
T ss_pred CeecccCCHHHhhcCCCChhhhhhhh----ccCc------c------cc----c--------------------------
Confidence 99999999888764311111100000 0000 0 00 0
Q ss_pred chHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 647 PPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQH 726 (1230)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 726 (1230)
. ..
T Consensus 279 -----------------------------------------------~-~~----------------------------- 281 (623)
T PRK10261 279 -----------------------------------------------K-GL----------------------------- 281 (623)
T ss_pred -----------------------------------------------c-cc-----------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 727 YNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVA 806 (1230)
Q Consensus 727 ~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 806 (1230)
..+ .-+. ...
T Consensus 282 -----------------------~~~-~~~~--~~~-------------------------------------------- 291 (623)
T PRK10261 282 -----------------------DYP-RRFP--LIS-------------------------------------------- 291 (623)
T ss_pred -----------------------cCC-cccc--ccc--------------------------------------------
Confidence 000 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHH
Q 000909 807 WKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKK 886 (1230)
Q Consensus 807 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~ 886 (1230)
T Consensus 292 -------------------------------------------------------------------------------- 291 (623)
T PRK10261 292 -------------------------------------------------------------------------------- 291 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000909 887 SWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDR 966 (1230)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~ 966 (1230)
...
T Consensus 292 -----------------------------------------------------------------------------~~~ 294 (623)
T PRK10261 292 -----------------------------------------------------------------------------LEH 294 (623)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCC--------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHH
Q 000909 967 QSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRP--------DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIG 1038 (1230)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~--------~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~ 1038 (1230)
....... .... .......-++++||+++|+.+. ..++|+||||+|++||++||+|+||||||||++
T Consensus 295 ~~~~~~~-----~~~~-~~~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk 368 (623)
T PRK10261 295 PAKQEPP-----IEQD-TVVDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGR 368 (623)
T ss_pred ccccCcc-----cccc-cccCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHH
Confidence 0000000 0000 0000012489999999996321 235999999999999999999999999999999
Q ss_pred HHhccccCCCCeEEECCeecCCCChH---HHhhcceEEcccc--cCCc-ccHHHHhccCC--CCC-CH----HHHHHHHH
Q 000909 1039 LIQRFYDVEQGSVRVDGMDVRELDVH---WYRKHTALVSQEP--VIYA-GNIRDNIVFGK--LDA-SE----NEVVEAAR 1105 (1230)
Q Consensus 1039 lL~rl~~p~~G~I~idG~di~~i~~~---~lR~~i~~VpQdp--~Lf~-gTIreNl~~g~--~~~-sd----~ei~~al~ 1105 (1230)
+|.|+.+|++|+|.++|.++...+.. .+|++|+||||+| .++. .||++|+.++. ... .. +++.+.++
T Consensus 369 ~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~ 448 (623)
T PRK10261 369 ALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLE 448 (623)
T ss_pred HHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999877643 4577899999998 3665 59999997531 111 11 33445555
Q ss_pred HhchH-HHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeE
Q 000909 1106 AANAH-EFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTT 1182 (1230)
Q Consensus 1106 ~a~l~-~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~Tv 1182 (1230)
..++. +.. ......||||||||++|||||+.+|++||||||||+||+.+.+.+.+.|++..+ |.|+
T Consensus 449 ~~gL~~~~~-----------~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tv 517 (623)
T PRK10261 449 RVGLLPEHA-----------WRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAY 517 (623)
T ss_pred HcCCCHHHh-----------hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEE
Confidence 55552 222 233457999999999999999999999999999999999999999999988643 7899
Q ss_pred EEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc-ccccHH
Q 000909 1183 IVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM-RGAFFN 1224 (1230)
Q Consensus 1183 I~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~-~g~y~~ 1224 (1230)
|+|||+++.+.. ||||+||++|+|+|.|+++++..+ ...|.+
T Consensus 518 i~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~ 561 (623)
T PRK10261 518 LFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTR 561 (623)
T ss_pred EEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHH
Confidence 999999999875 799999999999999999999865 334543
No 69
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-74 Score=705.81 Aligned_cols=462 Identities=23% Similarity=0.368 Sum_probs=360.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CCceEEECCeecCCCCHHH-Hh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA--DDGIVRIDGVDIRRLQLKW-VR 430 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~i~~~~~~~-~r 430 (1230)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... +|
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 4899999999963 4599999999999999999999999999999999999996 8999999999998776543 46
Q ss_pred hheEEEccCccccch-hHHHHHhcCCCC-----CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHH
Q 000909 431 REMGLVSQEHALFGT-SIKDNIMFGKLD-----ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAI 504 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~i 504 (1230)
+.++||+|++.++.. |++||+.++... .+.++.. ..+.+.++.+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMY-----LRAQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 789999999988865 999999986421 1112211 1234456666 66666677788999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhc
Q 000909 505 ARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRI 582 (1230)
Q Consensus 505 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 582 (1230)
||||+.+|++||||||||+||+.+...+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999999999998863 58899999999999876 999999999999987764432110
Q ss_pred CcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhhhH
Q 000909 583 DGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPEWK 662 (1230)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (1230)
+...
T Consensus 234 -----~~~~----------------------------------------------------------------------- 237 (506)
T PRK13549 234 -----DIIT----------------------------------------------------------------------- 237 (506)
T ss_pred -----HHHH-----------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 663 QGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRL 742 (1230)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (1230)
.+
T Consensus 238 ----------------------------~~-------------------------------------------------- 239 (506)
T PRK13549 238 ----------------------------MM-------------------------------------------------- 239 (506)
T ss_pred ----------------------------Hh--------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 743 RMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTIL 822 (1230)
Q Consensus 743 ~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~ 822 (1230)
+. ..
T Consensus 240 -------------~~--~~------------------------------------------------------------- 243 (506)
T PRK13549 240 -------------VG--RE------------------------------------------------------------- 243 (506)
T ss_pred -------------hC--cC-------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 823 CFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTF 902 (1230)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (1230)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCC
Q 000909 903 MSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRG 982 (1230)
Q Consensus 903 ~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~ 982 (1230)
.. +.. +.. ...
T Consensus 244 ------------------~~------------------------------------------~~~---~~~-----~~~- 254 (506)
T PRK13549 244 ------------------LT------------------------------------------ALY---PRE-----PHT- 254 (506)
T ss_pred ------------------cc------------------------------------------ccc---ccc-----ccC-
Confidence 00 000 000 000
Q ss_pred CCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-CCCCeEEECCeecCCC
Q 000909 983 SKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-VEQGSVRVDGMDVREL 1061 (1230)
Q Consensus 983 ~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-p~~G~I~idG~di~~i 1061 (1230)
+...-|+++||+++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++...
T Consensus 255 ----~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~ 330 (506)
T PRK13549 255 ----IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIR 330 (506)
T ss_pred ----CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCC
Confidence 00124899999999953223459999999999999999999999999999999999999 5999999999998755
Q ss_pred Ch-HHHhhcceEEcccc---cCCc-ccHHHHhccCCC-C------CCHHHHHHHHHHhchHHHHHhccccccc-cccCCC
Q 000909 1062 DV-HWYRKHTALVSQEP---VIYA-GNIRDNIVFGKL-D------ASENEVVEAARAANAHEFISSLKDGYET-ECGERG 1128 (1230)
Q Consensus 1062 ~~-~~lR~~i~~VpQdp---~Lf~-gTIreNl~~g~~-~------~sd~ei~~al~~a~l~~~i~~lp~gldt-~vge~G 1128 (1230)
+. +.+|++++||||+| .+|. .|+.||+.++.. . .+.++. ...+.+.++.+ |++. ......
T Consensus 331 ~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~ 403 (506)
T PRK13549 331 NPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAE-----LKTILESIQRL--KVKTASPELAI 403 (506)
T ss_pred CHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHH-----HHHHHHHHHhc--CccCCCccccc
Confidence 43 45677899999997 3554 599999986421 0 011111 11223344443 3321 234455
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEE
Q 000909 1129 VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRV 1206 (1230)
Q Consensus 1129 ~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~I 1206 (1230)
..||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +|+|||+|||+++.+.. ||++++|++|++
T Consensus 404 ~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i 483 (506)
T PRK13549 404 ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKL 483 (506)
T ss_pred ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 6899999999999999999999999999999999999999999998864 48999999999999865 799999999999
Q ss_pred EEecCHhHHh
Q 000909 1207 VERGTYAQLT 1216 (1230)
Q Consensus 1207 ve~Gt~~eLl 1216 (1230)
+..|+++++.
T Consensus 484 ~~~~~~~~~~ 493 (506)
T PRK13549 484 KGDLINHNLT 493 (506)
T ss_pred EEEeccccCC
Confidence 9999988764
No 70
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=8.8e-74 Score=702.88 Aligned_cols=465 Identities=28% Similarity=0.446 Sum_probs=360.0
Q ss_pred cEEEEEEEEECCCC-CCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCCCCHH
Q 000909 354 EIEFEHVKFSYPSR-PDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRRLQLK 427 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~~~~~ 427 (1230)
-|+++|++++|++. .++++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 124699999999999999999999999999999999999987 799999999999877643
Q ss_pred H---Hh-hheEEEccCcc--ccc-hhHHHHHhcCC---CCCCHHHHHHHHHHHhHHHHHHhCCCcccc---hhcCCCCCC
Q 000909 428 W---VR-REMGLVSQEHA--LFG-TSIKDNIMFGK---LDATMDEVIAAATAANAHNFIRQLPEGYET---KVGERGALL 494 (1230)
Q Consensus 428 ~---~r-~~i~~v~Q~~~--l~~-~ti~~Ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t---~~~~~g~~L 494 (1230)
. +| +++|||+|++. +++ .|+++|+.++. ...+.++. ...+.+.++.+ |++. .......+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAA-----RGEILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHC--CCCChHHHHhhCCccc
Confidence 2 33 57999999985 444 49999987421 01122211 12233445555 5543 346778899
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEE
Q 000909 495 SGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVE 571 (1230)
Q Consensus 495 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~ 571 (1230)
|||||||++|||||+.+|++||||||||+||+.+...+.+.++++. .|+|+|+|||+++.+.. ||+|++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998863 38999999999999875 99999999999999
Q ss_pred ecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHH
Q 000909 572 IGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFF 651 (1230)
Q Consensus 572 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (1230)
.|+++++.......+.
T Consensus 238 ~g~~~~~~~~~~~~~~---------------------------------------------------------------- 253 (529)
T PRK15134 238 QNRAATLFSAPTHPYT---------------------------------------------------------------- 253 (529)
T ss_pred eCCHHHHhhCCCCHHH----------------------------------------------------------------
Confidence 9987766431000000
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 652 RLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAY 731 (1230)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (1230)
.
T Consensus 254 ----------------------------------------------~--------------------------------- 254 (529)
T PRK15134 254 ----------------------------------------------Q--------------------------------- 254 (529)
T ss_pred ----------------------------------------------H---------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 732 MGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAV 811 (1230)
Q Consensus 732 ~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 811 (1230)
.+ +....
T Consensus 255 -----------~~-----------~~~~~--------------------------------------------------- 261 (529)
T PRK15134 255 -----------KL-----------LNSEP--------------------------------------------------- 261 (529)
T ss_pred -----------HH-----------HHhCc---------------------------------------------------
Confidence 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 812 VMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAG 891 (1230)
Q Consensus 812 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (1230)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 000909 892 IGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIP 971 (1230)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~ 971 (1230)
...+. +
T Consensus 262 -------------------------------------------------------------------------~~~~~-~ 267 (529)
T PRK15134 262 -------------------------------------------------------------------------SGDPV-P 267 (529)
T ss_pred -------------------------------------------------------------------------ccccc-c
Confidence 00000 0
Q ss_pred CCCCCCCCCCCCCcccccCcEEEEEEEEECCCC--------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 000909 972 GSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSR--------PDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRF 1043 (1230)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~--------~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl 1043 (1230)
. ...+ ..-|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+
T Consensus 268 ~------~~~~------~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl 335 (529)
T PRK15134 268 L------PEPA------SPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRL 335 (529)
T ss_pred c------CCCC------CCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCc
Confidence 0 0000 1138999999999621 124699999999999999999999999999999999999
Q ss_pred ccCCCCeEEECCeecCCCChHH---HhhcceEEcccc--cCCc-ccHHHHhccCCC----CCC----HHHHHHHHHHhch
Q 000909 1044 YDVEQGSVRVDGMDVRELDVHW---YRKHTALVSQEP--VIYA-GNIRDNIVFGKL----DAS----ENEVVEAARAANA 1109 (1230)
Q Consensus 1044 ~~p~~G~I~idG~di~~i~~~~---lR~~i~~VpQdp--~Lf~-gTIreNl~~g~~----~~s----d~ei~~al~~a~l 1109 (1230)
++ ++|+|.+||.++...+... +|++++||||+| .+|. .|++||+.++.. ..+ ++++.++++..++
T Consensus 336 ~~-~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 414 (529)
T PRK15134 336 IN-SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGL 414 (529)
T ss_pred CC-CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCC
Confidence 84 8999999999998776543 478899999998 3665 599999976411 111 1234444444444
Q ss_pred HHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEcc
Q 000909 1110 HEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAH 1187 (1230)
Q Consensus 1110 ~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaH 1187 (1230)
.+ ........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||
T Consensus 415 ~~----------~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH 484 (529)
T PRK15134 415 DP----------ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISH 484 (529)
T ss_pred CH----------HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeC
Confidence 21 11234456799999999999999999999999999999999999999999999874 3789999999
Q ss_pred Cchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1188 RLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1188 rl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
+++.+.. ||+|++|++|+|++.|+++++++.
T Consensus 485 d~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 516 (529)
T PRK15134 485 DLHVVRALCHQVIVLRQGEVVEQGDCERVFAA 516 (529)
T ss_pred CHHHHHHhcCeEEEEECCEEEEEcCHHHHhcC
Confidence 9999875 899999999999999999999865
No 71
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-72 Score=709.52 Aligned_cols=512 Identities=23% Similarity=0.339 Sum_probs=442.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhh
Q 000909 74 KCSLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEK 153 (1230)
Q Consensus 74 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~ 153 (1230)
.+...+.+++++..++..++.+.+...+.+...+++.++++++++.|++|||. +++| +|+||+++|++.+++.++..
T Consensus 859 ~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt-TP~G--RILNRFSkD~~~vD~~Lp~~ 935 (1381)
T KOG0054|consen 859 FYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT-TPTG--RILNRFSKDIDTVDVLLPFT 935 (1381)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC-CCcc--chhhhcccchHHHHHhhHHH
Confidence 45566777788888888899999999999999999999999999999999997 6777 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcc
Q 000909 154 VPIFVMNASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSA 233 (1230)
Q Consensus 154 ~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 233 (1230)
+..++..++.+++.++++.+..|++.++++++..+++.+..++.+..+...+-.....+...+++.|+++|+.|||+|+.
T Consensus 936 ~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~ 1015 (1381)
T KOG0054|consen 936 LEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGK 1015 (1381)
T ss_pred HHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccc
Confidence 99999999999999999999999988888888888888888888888888888888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH
Q 000909 234 ERRIIDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSAL 312 (1230)
Q Consensus 234 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 312 (1230)
|++|.+++....+...+...-......+...-. .+..+.......+. .+...+..++|.+-..+.|.+.....+..+.
T Consensus 1016 ~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~-vl~~~~~~~~g~vGLslsyal~lt~~l~~~v 1094 (1381)
T KOG0054|consen 1016 EERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFA-VLLPSGLISPGLVGLSLSYALQLTGLLQWLV 1094 (1381)
T ss_pred cHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888776544332222221111 22222111111111 1111222567888888888888888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC--CcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEc
Q 000909 313 PELKYFTEASIAASRIFDRIDRVPEIDGEDTK--GLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVG 390 (1230)
Q Consensus 313 ~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~--~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG 390 (1230)
.....+...+.|++|+.++.+.++|.+...+. +++..+.+|+|+|+|++.+|..+ .++||+||||+|+|||++||||
T Consensus 1095 R~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVG 1173 (1381)
T KOG0054|consen 1095 RQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVG 1173 (1381)
T ss_pred HHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeC
Confidence 99999999999999999999866552111111 22335678999999999999744 4679999999999999999999
Q ss_pred CCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHH
Q 000909 391 ASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAA 470 (1230)
Q Consensus 391 ~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~ 470 (1230)
++|||||||+++|.|+.+|.+|+|.|||.||.+++++++|++++++||||.||+||+|.|+.-- .+.+|+++|+|++.+
T Consensus 1174 RTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf-~e~sD~~IW~ALe~~ 1252 (1381)
T KOG0054|consen 1174 RTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPF-DEYSDDEIWEALERC 1252 (1381)
T ss_pred CCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcc-cccCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999732 357899999999999
Q ss_pred hHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEec
Q 000909 471 NAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAH 550 (1230)
Q Consensus 471 ~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH 550 (1230)
++.++++++|+|+|+.+.|+|.|+|-||||.+||||||+++++||+|||||+++|++|+..||+.|++..++||||.|+|
T Consensus 1253 ~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAH 1332 (1381)
T KOG0054|consen 1253 QLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAH 1332 (1381)
T ss_pred ChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHH
Q 000909 551 KLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAK 591 (1230)
Q Consensus 551 ~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 591 (1230)
|++++.++|||+|||+|+++|.|+|++|+++.++.|+++..
T Consensus 1333 Rl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1333 RLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLK 1373 (1381)
T ss_pred ccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHH
Confidence 99999999999999999999999999999987788865443
No 72
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.6e-71 Score=685.24 Aligned_cols=539 Identities=17% Similarity=0.160 Sum_probs=435.9
Q ss_pred HHHHHHhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 649 SFFRLLSLNA-PEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHY 727 (1230)
Q Consensus 649 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1230)
..++++++.+ +.++.+.++++++.+.+......++.+..+++.... . .. .....++++.++..++.++..+
T Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~---~---~~--~~~~~~~~~~~~~~~~~~~~~~ 75 (555)
T TIGR01194 4 AIGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENF---L---GQ--GSLFSFGGLCLLALLFRIGADI 75 (555)
T ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---c---cc--hHHHHHHHHHHHHHHHHHHHHH
Confidence 3566677777 777777777777766666665555555554432100 0 00 0111233445566678888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 728 NFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAW 807 (1230)
Q Consensus 728 ~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 807 (1230)
+....+.+...++|.++|++++++|+.||+ ++++|++++|+++|++.++.++.. +..++..++.++++++++++++|
T Consensus 76 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~--~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 152 (555)
T TIGR01194 76 FPAYAGMHIIANLRIALCEKILGAPIEEID--RRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSV 152 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHH--hcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999998 678999999999999999998864 66777778888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHH--HHHHHHHHHHHHHHHHHHH
Q 000909 808 KLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAG--KVLQIFDEAQEEPRKQARK 885 (1230)
Q Consensus 808 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~--~~~~~~~~~~~~~~~~~~~ 885 (1230)
.+++++++++|+.++...+..+.......+.++..++..+.+.|.+.|++++|+|+.++ ...+++++..++..+...+
T Consensus 153 ~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (555)
T TIGR01194 153 PMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHII 232 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999988888877777666666666666777777888999999999999999999954 5567788877777776665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000909 886 KSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILD 965 (1230)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~ 965 (1230)
..........+...+..+..++.+++++.. |.++.|.++++..+...+..|+..+...+.++.++..+++|+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~ 309 (555)
T TIGR01194 233 EILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGE 309 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 554444444444444444455555555543 78999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCCCCCCCCCC--CCcccccCcEEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHh
Q 000909 966 RQSLIPGSSQAGDGTRG--SKLQKISGKIEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQ 1041 (1230)
Q Consensus 966 ~~~~~~~~~~~~~~~~~--~~~~~~~g~I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1041 (1230)
.+++.+...+..+.... .++....++|+|+||+|+|++.+ ++++|+|+||++++||++|||||||||||||+++|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~ 389 (555)
T TIGR01194 310 RFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFC 389 (555)
T ss_pred hhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHh
Confidence 42221111000000000 01112346899999999997532 236999999999999999999999999999999999
Q ss_pred ccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhcccccc
Q 000909 1042 RFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYE 1121 (1230)
Q Consensus 1042 rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gld 1121 (1230)
|+|+|++|+|.+||+|+++++.+++|+++++|||||++|++|+++|+ .+++++++++++++.++++++++++|+|||
T Consensus 390 g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~ 466 (555)
T TIGR01194 390 GLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFS 466 (555)
T ss_pred CCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccC
Confidence 99999999999999999999999999999999999999999999996 467889999999999999999999999999
Q ss_pred ccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHH-h-cCCCeEEEEccCchhhhhcCEEE
Q 000909 1122 TECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDR-I-MMGRTTIVVAHRLNTIKKLDSIA 1199 (1230)
Q Consensus 1122 t~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~-~-~~~~TvI~IaHrl~ti~~~D~I~ 1199 (1230)
|. .+|||||||||+||||++++|+|||||||||+||++||+.+++.+.+ . .+++|+|+||||++++..||+|+
T Consensus 467 t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~ 541 (555)
T TIGR01194 467 TT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQII 541 (555)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEE
Confidence 94 68999999999999999999999999999999999999999987643 3 36899999999999999999999
Q ss_pred EEeCcEEEEe
Q 000909 1200 LVADGRVVER 1209 (1230)
Q Consensus 1200 vl~~G~Ive~ 1209 (1230)
||++|+|+|.
T Consensus 542 ~l~~G~i~~~ 551 (555)
T TIGR01194 542 KLAAGCIVKD 551 (555)
T ss_pred EEECCEEEEe
Confidence 9999999975
No 73
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=4e-71 Score=681.77 Aligned_cols=534 Identities=18% Similarity=0.209 Sum_probs=436.5
Q ss_pred chHHHHHHhcC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHH
Q 000909 8 NNIGIIFRFAD-RTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAV 86 (1230)
Q Consensus 8 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 86 (1230)
..+++++++++ +++ ..++++++++++.++.....+++++.+++..... .. ..+ .+++++.++.
T Consensus 3 ~~~~~l~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-------~~----~~~----~~~~~~~~~~ 66 (555)
T TIGR01194 3 AAIGEILALLRSPFP-AITAFSIALGLAGGLAIIALLASINNAIHEENFL-------GQ----GSL----FSFGGLCLLA 66 (555)
T ss_pred chHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-------cc----hHH----HHHHHHHHHH
Confidence 45677888887 654 4455666666666666666667777777632100 00 011 1233345556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHH
Q 000909 87 MVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFIS 166 (1230)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~ 166 (1230)
.++.++..++.+..+.++..++|.++|+|++++|+++|++ .++| ++++|+++|++.+++++.. ++.++..++++++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~-~~~G--~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~ 142 (555)
T TIGR01194 67 LLFRIGADIFPAYAGMHIIANLRIALCEKILGAPIEEIDR-RGAH--NLIPLLTHDIDQINAFLFI-FPPIAIALAIFFF 142 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHh-cCcc--hhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 6788899999999999999999999999999999999997 5667 9999999999999998864 7778888888888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHH--HHHHHHHHH
Q 000909 167 GLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAER--RIIDRYEAI 244 (1230)
Q Consensus 167 ~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~--~~~~~~~~~ 244 (1230)
.++++++++|.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|++++|+|+.++ ...+++++.
T Consensus 143 ~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~ 222 (555)
T TIGR01194 143 CIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQES 222 (555)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHH
Confidence 999999999999999988888888877777788888888888999999999999999999999999954 567888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 245 LDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASI 323 (1230)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (1230)
.++..+...+.........++. .+......+.++++++. +.+++|.++++..+......|+..+...+..++++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~ 299 (555)
T TIGR01194 223 ANNIADLHIIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQI 299 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777666555444333332 22233333344444432 6889999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCC--CC-CCCC-CCc---ccCCccccEEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCC
Q 000909 324 AASRIFDRIDRVPE--ID-GEDT-KGL---VLDEVRGEIEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGS 394 (1230)
Q Consensus 324 s~~ri~~~l~~~~~--~~-~~~~-~~~---~~~~~~~~i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGs 394 (1230)
+++|+.++++...+ .. +... ... .+....+.|+++||+|+|++.+ ++++|+|+||++++||++||||||||
T Consensus 300 s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGs 379 (555)
T TIGR01194 300 ACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGC 379 (555)
T ss_pred HHHHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCC
Confidence 99999999763211 11 0000 000 1112246799999999997532 23699999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHH
Q 000909 395 GKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHN 474 (1230)
Q Consensus 395 GKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~ 474 (1230)
|||||+++|+|+|+|++|+|.+||.++++++.+++|++++||+||+++|++|+++|+ .++.++++++++++.+++++
T Consensus 380 GKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~ 456 (555)
T TIGR01194 380 GKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIAD 456 (555)
T ss_pred CHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCch
Confidence 999999999999999999999999999999999999999999999999999999995 35677889999999999999
Q ss_pred HHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHH-Hh-cCCCeEEEEecCc
Q 000909 475 FIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALD-QA-SLGRTTLVVAHKL 552 (1230)
Q Consensus 475 ~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~-~~-~~~~t~i~itH~l 552 (1230)
+++.+|+|++|. .+||||||||++||||++++|+|+|||||||+||+++++.+.+.+. .. .+++|+|+||||+
T Consensus 457 ~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~ 531 (555)
T TIGR01194 457 KVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDD 531 (555)
T ss_pred hhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccH
Confidence 999999999994 7899999999999999999999999999999999999999988764 33 4689999999999
Q ss_pred hhhhccCEEEEEeCCeEEEe
Q 000909 553 STVRNADLIAVVDNGCLVEI 572 (1230)
Q Consensus 553 ~~~~~~d~i~~l~~G~i~~~ 572 (1230)
+++..||+|++|++|+++|.
T Consensus 532 ~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 532 QYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999874
No 74
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-73 Score=694.90 Aligned_cols=459 Identities=22% Similarity=0.354 Sum_probs=356.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH-Hhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW-VRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~-~r~~ 432 (1230)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 4899999999963 35999999999999999999999999999999999999999999999999998777654 3467
Q ss_pred eEEEccCccccch-hHHHHHhcCCCCC---------CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHH
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLDA---------TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~~---------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 502 (1230)
++||+|++.++.. |++||+.++.... ..++. ...+.+.++.+ |++........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREM-----RVRAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHH-----HHHHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988865 9999998763210 11111 12234455555 666566777889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999998864 48999999999999876 99999999999998887655422
Q ss_pred hcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhh
Q 000909 581 RIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPE 660 (1230)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1230)
. +....
T Consensus 235 ~------~~~~~-------------------------------------------------------------------- 240 (510)
T PRK09700 235 D------DIVRL-------------------------------------------------------------------- 240 (510)
T ss_pred H------HHHHH--------------------------------------------------------------------
Confidence 1 00000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 661 WKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRI 740 (1230)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (1230)
.
T Consensus 241 -------------------------------~------------------------------------------------ 241 (510)
T PRK09700 241 -------------------------------M------------------------------------------------ 241 (510)
T ss_pred -------------------------------h------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 741 RLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLT 820 (1230)
Q Consensus 741 ~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~ 820 (1230)
+. .. .
T Consensus 242 ---------------~~--~~-~--------------------------------------------------------- 246 (510)
T PRK09700 242 ---------------VG--RE-L--------------------------------------------------------- 246 (510)
T ss_pred ---------------cC--CC-c---------------------------------------------------------
Confidence 00 00 0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 821 ILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCL 900 (1230)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (1230)
.
T Consensus 247 -----------~-------------------------------------------------------------------- 247 (510)
T PRK09700 247 -----------Q-------------------------------------------------------------------- 247 (510)
T ss_pred -----------c--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCC
Q 000909 901 TFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGT 980 (1230)
Q Consensus 901 ~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~ 980 (1230)
. ..++..+.. ..
T Consensus 248 ---------------------------------------------------------~------~~~~~~~~~-----~~ 259 (510)
T PRK09700 248 ---------------------------------------------------------N------RFNAMKENV-----SN 259 (510)
T ss_pred ---------------------------------------------------------c------ccccccccc-----cc
Confidence 0 000000000 00
Q ss_pred CCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC
Q 000909 981 RGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE 1060 (1230)
Q Consensus 981 ~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1060 (1230)
. .....|+++|+++.|. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..
T Consensus 260 ~-----~~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~ 329 (510)
T PRK09700 260 L-----AHETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISP 329 (510)
T ss_pred C-----CCCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCC
Confidence 0 0011499999999772 28999999999999999999999999999999999999999999999999876
Q ss_pred CCh-HHHhhcceEEcccc---cCCc-ccHHHHhccCCCC-----------CCHHHHHHHHHHhchHHHHHhcccccc-cc
Q 000909 1061 LDV-HWYRKHTALVSQEP---VIYA-GNIRDNIVFGKLD-----------ASENEVVEAARAANAHEFISSLKDGYE-TE 1123 (1230)
Q Consensus 1061 i~~-~~lR~~i~~VpQdp---~Lf~-gTIreNl~~g~~~-----------~sd~ei~~al~~a~l~~~i~~lp~gld-t~ 1123 (1230)
.+. +.+|++++||||++ .+|. -|+++|+.++... ....+. ...+.+.++.+ |+. ..
T Consensus 330 ~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~ 402 (510)
T PRK09700 330 RSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDE-----QRTAENQRELL--ALKCHS 402 (510)
T ss_pred CCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHH-----HHHHHHHHHhc--CCCCCC
Confidence 544 45678899999984 5675 4999999865210 011110 11122333333 332 12
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEE
Q 000909 1124 CGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALV 1201 (1230)
Q Consensus 1124 vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl 1201 (1230)
.......||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++.. +|+|+|+|||+++.+. .||+|++|
T Consensus 403 ~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l 482 (510)
T PRK09700 403 VNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVF 482 (510)
T ss_pred ccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEE
Confidence 334456799999999999999999999999999999999999999999999864 4889999999999886 47999999
Q ss_pred eCcEEEEecCHhH
Q 000909 1202 ADGRVVERGTYAQ 1214 (1230)
Q Consensus 1202 ~~G~Ive~Gt~~e 1214 (1230)
++|++++.+++.+
T Consensus 483 ~~G~i~~~~~~~~ 495 (510)
T PRK09700 483 CEGRLTQILTNRD 495 (510)
T ss_pred ECCEEEEEecCcc
Confidence 9999999887633
No 75
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1e-72 Score=608.71 Aligned_cols=470 Identities=28% Similarity=0.426 Sum_probs=367.0
Q ss_pred cEEEEEEEEECCC-CCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCCCCHH
Q 000909 354 EIEFEHVKFSYPS-RPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRRLQLK 427 (1230)
Q Consensus 354 ~i~~~~v~~~y~~-~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~~~~~ 427 (1230)
-++++|++..|.. .....++++|||+|++||++||||+||||||-..+.++|+++. .+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4788888888752 2345699999999999999999999999999999999999874 479999999999999887
Q ss_pred HHhh----heEEEccCcc--ccch-hHHHHH----hcCCCCCCHHHHHHHHHHHhHHHHHHhCCCccc---chhcCCCCC
Q 000909 428 WVRR----EMGLVSQEHA--LFGT-SIKDNI----MFGKLDATMDEVIAAATAANAHNFIRQLPEGYE---TKVGERGAL 493 (1230)
Q Consensus 428 ~~r~----~i~~v~Q~~~--l~~~-ti~~Ni----~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~~g~~ 493 (1230)
.+|. +|+++||||. |-+- ||..-| .+-.. +..++..+.+.+.++.. |+. ..+...+.+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg------~~~~~Ar~r~lelL~~V--gI~~p~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRG------LSRAAARARALELLELV--GIPEPEKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhc------ccHHHHHHHHHHHHHHc--CCCchhhhhhhCCcc
Confidence 7764 8999999995 3222 554444 33211 11122223333344433 442 346778899
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEE
Q 000909 494 LSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLV 570 (1230)
Q Consensus 494 LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~ 570 (1230)
|||||||||.||.||+.+|++||-||||.|||......|.+.++++. .|..+++|||+|..+++ ||||+||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 99999999999999999999999999999999999999999999864 58999999999999987 9999999999999
Q ss_pred EecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHH
Q 000909 571 EIGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSF 650 (1230)
Q Consensus 571 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (1230)
|.|+.+++...+...|.+..-...
T Consensus 238 E~~~t~~lF~~PqHpYTr~Ll~ae-------------------------------------------------------- 261 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKLLAAE-------------------------------------------------------- 261 (534)
T ss_pred ecCcHHHHhhCCCChHHHHHHhcC--------------------------------------------------------
Confidence 999999888765555544321100
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 651 FRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFA 730 (1230)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1230)
T Consensus 262 -------------------------------------------------------------------------------- 261 (534)
T COG4172 262 -------------------------------------------------------------------------------- 261 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 731 YMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLA 810 (1230)
Q Consensus 731 ~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 810 (1230)
T Consensus 262 -------------------------------------------------------------------------------- 261 (534)
T COG4172 262 -------------------------------------------------------------------------------- 261 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 811 VVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLA 890 (1230)
Q Consensus 811 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (1230)
T Consensus 262 -------------------------------------------------------------------------------- 261 (534)
T COG4172 262 -------------------------------------------------------------------------------- 261 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 000909 891 GIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLI 970 (1230)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~ 970 (1230)
|.
T Consensus 262 -----------------------------------------------------------------------------P~- 263 (534)
T COG4172 262 -----------------------------------------------------------------------------PS- 263 (534)
T ss_pred -----------------------------------------------------------------------------CC-
Confidence 00
Q ss_pred CCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCC--------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000909 971 PGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRP--------DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQR 1042 (1230)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~--------~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~r 1042 (1230)
+...+.+....--++.+||...||-+. ...++++|||+.++||++||||.|||||||+-.+|+|
T Consensus 264 --------g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allr 335 (534)
T COG4172 264 --------GDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLR 335 (534)
T ss_pred --------CCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHh
Confidence 000000000111255556665554221 1237999999999999999999999999999999999
Q ss_pred cccCCCCeEEECCeecCCCChHH---HhhcceEEccccc--CC-cccHHHHhccC----CCCCC----HHHHHHHHHHhc
Q 000909 1043 FYDVEQGSVRVDGMDVRELDVHW---YRKHTALVSQEPV--IY-AGNIRDNIVFG----KLDAS----ENEVVEAARAAN 1108 (1230)
Q Consensus 1043 l~~p~~G~I~idG~di~~i~~~~---lR~~i~~VpQdp~--Lf-~gTIreNl~~g----~~~~s----d~ei~~al~~a~ 1108 (1230)
+.+++ |+|.++|.||...+.+. +|+++.+|+|||+ |= ..||.+=|.=| .|..+ ++.+.+|++.+|
T Consensus 336 L~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVG 414 (534)
T COG4172 336 LIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVG 414 (534)
T ss_pred hcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcC
Confidence 99976 99999999999888654 6899999999996 21 23665555433 33333 456788899998
Q ss_pred hHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEc
Q 000909 1109 AHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVA 1186 (1230)
Q Consensus 1109 l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~Ia 1186 (1230)
++.-..+ .-+..+|||||||||||||+.-+|++++||||||+||..-++.|.+.++++. .+-+-++||
T Consensus 415 LDp~~r~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFIS 484 (534)
T COG4172 415 LDPATRN----------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFIS 484 (534)
T ss_pred CChhHhh----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 8665432 2345799999999999999999999999999999999999999999999864 477999999
Q ss_pred cCchhhh-hcCEEEEEeCcEEEEecCHhHHhhc-ccccHH
Q 000909 1187 HRLNTIK-KLDSIALVADGRVVERGTYAQLTHM-RGAFFN 1224 (1230)
Q Consensus 1187 Hrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~-~g~y~~ 1224 (1230)
|+|..++ -||+|+||.+|+|||+|+-++++++ +..|-+
T Consensus 485 HDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 485 HDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred ccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 9999997 4799999999999999999999988 445543
No 76
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=6.2e-73 Score=694.62 Aligned_cols=458 Identities=26% Similarity=0.423 Sum_probs=353.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC--CCCCceEEEC---------------
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFY--DADDGIVRID--------------- 417 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~--------------- 417 (1230)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 578999999963 35999999999999999999999999999999999996 7999999997
Q ss_pred --------CeecC-------CCC---HHHHhhheEEEccC-ccccc-hhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHH
Q 000909 418 --------GVDIR-------RLQ---LKWVRREMGLVSQE-HALFG-TSIKDNIMFGKL--DATMDEVIAAATAANAHNF 475 (1230)
Q Consensus 418 --------g~~i~-------~~~---~~~~r~~i~~v~Q~-~~l~~-~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~ 475 (1230)
|.++. ..+ ...+|+.++||+|+ +.+|+ .|++||+.++.. ....++.. ..+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHH
Confidence 33331 111 13457789999998 57776 499999987521 11222211 223445
Q ss_pred HHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCch
Q 000909 476 IRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLS 553 (1230)
Q Consensus 476 i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~ 553 (1230)
++.+ |++........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 6666 77766777889999999999999999999999999999999999999999999998863 3899999999999
Q ss_pred hhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCC
Q 000909 554 TVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFAS 632 (1230)
Q Consensus 554 ~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1230)
.+.. ||+|++|++|++++.|+++++... +.
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~----~~--------------------------------------------- 261 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAV----FM--------------------------------------------- 261 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHH----HH---------------------------------------------
Confidence 9875 999999999999887765543210 00
Q ss_pred CCCCCCCCCCCCCCchHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHH
Q 000909 633 PLPVIDSPQPVTYLPPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFC 712 (1230)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (1230)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000909 713 SLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTT 792 (1230)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~ 792 (1230)
. .
T Consensus 262 --------------------------------------------~--~-------------------------------- 263 (520)
T TIGR03269 262 --------------------------------------------E--G-------------------------------- 263 (520)
T ss_pred --------------------------------------------h--h--------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHH
Q 000909 793 SAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIF 872 (1230)
Q Consensus 793 ~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~ 872 (1230)
+ .
T Consensus 264 --------------~------------------------~---------------------------------------- 265 (520)
T TIGR03269 264 --------------V------------------------S---------------------------------------- 265 (520)
T ss_pred --------------c------------------------h----------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 873 DEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAK 952 (1230)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 952 (1230)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCC--CCCcccccceeEEEeCCcEEEEEcCCC
Q 000909 953 GSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPS--RPDALVLRQFSMEVKPGTSVGLVGKSG 1030 (1230)
Q Consensus 953 ~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~--~~~~~vL~~vsl~I~~Ge~vaIVG~SG 1030 (1230)
++ .... + . .. ...-|+++||+++|++ ....++|+|+||+|++||++||+||||
T Consensus 266 ------~~----~~~~--~-~-----~~-------~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NG 320 (520)
T TIGR03269 266 ------EV----EKEC--E-V-----EV-------GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSG 320 (520)
T ss_pred ------hh----cccc--c-c-----CC-------CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCC
Confidence 00 0000 0 0 00 0114999999999963 112469999999999999999999999
Q ss_pred CCHHHHHHHHhccccCCCCeEEEC-Ce---ecCCCC---hHHHhhcceEEcccccCCcc-cHHHHhccCCC-CCC----H
Q 000909 1031 CGKSTVIGLIQRFYDVEQGSVRVD-GM---DVRELD---VHWYRKHTALVSQEPVIYAG-NIRDNIVFGKL-DAS----E 1097 (1230)
Q Consensus 1031 SGKSTL~~lL~rl~~p~~G~I~id-G~---di~~i~---~~~lR~~i~~VpQdp~Lf~g-TIreNl~~g~~-~~s----d 1097 (1230)
||||||+++|+|+++|++|+|.++ |. ++...+ ...+|++++||||++.+|.. |+++|+.++.. ... +
T Consensus 321 sGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~ 400 (520)
T TIGR03269 321 AGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELAR 400 (520)
T ss_pred CCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHH
Confidence 999999999999999999999996 64 344333 23567789999999988874 99999975311 111 1
Q ss_pred HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc
Q 000909 1098 NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM 1177 (1230)
Q Consensus 1098 ~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~ 1177 (1230)
+++.++++..++.+. ..+.........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..
T Consensus 401 ~~~~~~l~~~~l~~~------~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~ 474 (520)
T TIGR03269 401 MKAVITLKMVGFDEE------KAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAR 474 (520)
T ss_pred HHHHHHHHhCCCCCc------cchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH
Confidence 233444444444210 00001234456799999999999999999999999999999999999999999998874
Q ss_pred --CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1178 --MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1178 --~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
.+.|+|+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 475 ~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 518 (520)
T TIGR03269 475 EEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVEE 518 (520)
T ss_pred HHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhh
Confidence 37899999999999875 799999999999999999988653
No 77
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.7e-72 Score=686.90 Aligned_cols=454 Identities=21% Similarity=0.345 Sum_probs=354.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH-Hhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW-VRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~-~r~~ 432 (1230)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 3899999999963 45999999999999999999999999999999999999999999999999987665443 4568
Q ss_pred eEEEccCccccch-hHHHHHhcCCCC------CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLD------ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
++||+|++.++.. |++||+.++... .+.++.. ..+.+.++.+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMY-----AEADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988865 999999986421 1111111 1233455665 666666777789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcC
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRID 583 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 583 (1230)
|||+.+|++|||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 99999999999999999999999999999998763 57899999999999865 999999999999987654432110
Q ss_pred cHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhhhHH
Q 000909 584 GHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPEWKQ 663 (1230)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (1230)
.+..
T Consensus 232 ----~~~~------------------------------------------------------------------------ 235 (501)
T PRK10762 232 ----SLIE------------------------------------------------------------------------ 235 (501)
T ss_pred ----HHHH------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 664 GLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLR 743 (1230)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (1230)
..
T Consensus 236 ---------------------------~~--------------------------------------------------- 237 (501)
T PRK10762 236 ---------------------------MM--------------------------------------------------- 237 (501)
T ss_pred ---------------------------Hh---------------------------------------------------
Confidence 00
Q ss_pred HHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 744 MLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILC 823 (1230)
Q Consensus 744 l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~ 823 (1230)
+. ..
T Consensus 238 ------------~~--~~-------------------------------------------------------------- 241 (501)
T PRK10762 238 ------------VG--RK-------------------------------------------------------------- 241 (501)
T ss_pred ------------cC--CC--------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 824 FYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFM 903 (1230)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (1230)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCC
Q 000909 904 SWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGS 983 (1230)
Q Consensus 904 ~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~ 983 (1230)
. ....+..+ .
T Consensus 242 --------------------------------------------------------~---~~~~~~~~-------~---- 251 (501)
T PRK10762 242 --------------------------------------------------------L---EDQYPRLD-------K---- 251 (501)
T ss_pred --------------------------------------------------------c---cccccccc-------c----
Confidence 0 00000000 0
Q ss_pred CcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh
Q 000909 984 KLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV 1063 (1230)
Q Consensus 984 ~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~ 1063 (1230)
++..--|+++||++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.
T Consensus 252 --~~~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~ 321 (501)
T PRK10762 252 --APGEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSP 321 (501)
T ss_pred --CCCCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCH
Confidence 00011388999984 27999999999999999999999999999999999999999999999999987665
Q ss_pred -HHHhhcceEEcccc---cCCc-ccHHHHhccCCCC--------CCHHHHHHHHHHhchHHHHHhcccccc-ccccCCCC
Q 000909 1064 -HWYRKHTALVSQEP---VIYA-GNIRDNIVFGKLD--------ASENEVVEAARAANAHEFISSLKDGYE-TECGERGV 1129 (1230)
Q Consensus 1064 -~~lR~~i~~VpQdp---~Lf~-gTIreNl~~g~~~--------~sd~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~ 1129 (1230)
+.+|++++||||+| .+|. .|+++|+.++... .+.++. ...+.++++.+ |++ ........
T Consensus 322 ~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~ 394 (501)
T PRK10762 322 QDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE-----QQAVSDFIRLF--NIKTPSMEQAIG 394 (501)
T ss_pred HHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH-----HHHHHHHHHhc--CCCCCCccCchh
Confidence 34678899999997 3544 6999999864210 111111 11123334433 332 22345566
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEE
Q 000909 1130 QLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVV 1207 (1230)
Q Consensus 1130 ~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv 1207 (1230)
.||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|+++
T Consensus 395 ~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~ 474 (501)
T PRK10762 395 LLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRIS 474 (501)
T ss_pred hCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEE
Confidence 899999999999999999999999999999999999999999999875 48899999999999865 7999999999999
Q ss_pred EecCHhHHh
Q 000909 1208 ERGTYAQLT 1216 (1230)
Q Consensus 1208 e~Gt~~eLl 1216 (1230)
+.|+++++.
T Consensus 475 ~~~~~~~~~ 483 (501)
T PRK10762 475 GEFTREQAT 483 (501)
T ss_pred EEeccccCC
Confidence 999887754
No 78
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=5e-71 Score=614.67 Aligned_cols=529 Identities=22% Similarity=0.295 Sum_probs=457.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000909 671 AIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILT 750 (1230)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~ 750 (1230)
+.+........+++.-++-+....+. ..+.+....++.+++.++..++-+++..++.+++.++-..++..+|...++
T Consensus 32 S~~INiL~L~~~lyMLQVyDRVL~S~---s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~ 108 (580)
T COG4618 32 SAVINLLALTGPLYMLQVYDRVLPSR---SVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFS 108 (580)
T ss_pred HHHHHHHHHhhhHHHHHHHhhhccCC---CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh
Confidence 33334444444454445444443221 112223333444455567778888999999999999999999999999987
Q ss_pred CCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 751 FEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVL 830 (1230)
Q Consensus 751 ~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~ 830 (1230)
+|..- +..|+=..- -+|.++++.++...-...+....+.-..+.++|.+++++.++.++...+++...++..+.
T Consensus 109 ~~l~~-----~~~g~~~Q~-LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~ 182 (580)
T COG4618 109 APLLR-----RGSGDGLQP-LRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERA 182 (580)
T ss_pred hHHhh-----cCCCccccc-hhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77652 233332222 379999999998876666666667777778888899999999998888888888888888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 831 LSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFW 910 (1230)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1230)
.++...+..+...+.+.+...+..+.++|+++|......++|.+....+...+.+..-..+...+++..+-.++...++.
T Consensus 183 t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg 262 (580)
T COG4618 183 TRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLG 262 (580)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77777777777778888999999999999999999999999999999999988888888889999999999999999999
Q ss_pred HHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcccccC
Q 000909 911 YGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISG 990 (1230)
Q Consensus 911 ~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 990 (1230)
.|++++.+|++|+|.+++....+.....|+...+..|..+..++.|..|+.++++..|...+ .-+.|..+|
T Consensus 263 ~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~---------~m~LP~P~g 333 (580)
T COG4618 263 LGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE---------RMPLPAPQG 333 (580)
T ss_pred cceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC---------CCCCCCCCc
Confidence 99999999999999999999888899999999999999999999999999999987665332 123344579
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.+.++++++.-|+. ++|+|+|+||+++|||-+|||||||||||||.++|.|.+.|.+|+|++||-|+++++.+++-++|
T Consensus 334 ~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hi 412 (580)
T COG4618 334 ALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHI 412 (580)
T ss_pred eeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhcccc
Confidence 99999999977654 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000909 1071 ALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPT 1150 (1230)
Q Consensus 1071 ~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ 1150 (1230)
||.|||..||+|||+|||+-..++++++.|.+|++.++.||.|.+||+||||.+|++|..|||||||||+||||++.+|.
T Consensus 413 GYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~ 492 (580)
T COG4618 413 GYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPF 492 (580)
T ss_pred CcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCc
Confidence 99999999999999999985556889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1151 ILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1151 ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
+++||||-|+||.+-|+.+.++|.+.+ +|+|+|+||||.+.+..+|+|+||++|++..+|+-+|.+++
T Consensus 493 lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 493 LVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999999875 59999999999999999999999999999999999999876
No 79
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.5e-72 Score=682.47 Aligned_cols=466 Identities=21% Similarity=0.335 Sum_probs=358.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHh-hh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVR-RE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r-~~ 432 (1230)
-|+++|++++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 4999999999963 3599999999999999999999999999999999999999999999999999877766554 47
Q ss_pred eEEEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
+||++|++.++.. |++||+.++.... .+.. ..+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKR--QASM-----QKMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccc--hHHH-----HHHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999988875 9999999874321 1111 1233445555 666666777889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHHHHH
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHYAKM 589 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 589 (1230)
|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++... .....+
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~--~~~~~~ 236 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD--DIIQAI 236 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH--HHHHHH
Confidence 99999999999999999999999998763 58999999999999865 999999999999999988776431 000000
Q ss_pred HHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhhhHHHHHHHH
Q 000909 590 AKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPEWKQGLIGSL 669 (1230)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (1230)
. . .. . . .
T Consensus 237 -~---~-~~--~--~--~-------------------------------------------------------------- 243 (510)
T PRK15439 237 -T---P-AA--R--E--K-------------------------------------------------------------- 243 (510)
T ss_pred -h---C-cc--c--c--c--------------------------------------------------------------
Confidence 0 0 00 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 670 SAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKIL 749 (1230)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l 749 (1230)
T Consensus 244 -------------------------------------------------------------------------------- 243 (510)
T PRK15439 244 -------------------------------------------------------------------------------- 243 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 750 TFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKV 829 (1230)
Q Consensus 750 ~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~ 829 (1230)
.. . ..
T Consensus 244 --~~---~--~~-------------------------------------------------------------------- 248 (510)
T PRK15439 244 --SL---S--AS-------------------------------------------------------------------- 248 (510)
T ss_pred --cc---c--cc--------------------------------------------------------------------
Confidence 00 0 00
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 830 LLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDF 909 (1230)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1230)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCccccc
Q 000909 910 WYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKIS 989 (1230)
Q Consensus 910 ~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1230)
.+. . ...+.. +.. .. ...
T Consensus 249 ------------------------------------------------~~~-~-~~~~~~-~~~-----~~------~~~ 266 (510)
T PRK15439 249 ------------------------------------------------QKL-W-LELPGN-RRQ-----QA------AGA 266 (510)
T ss_pred ------------------------------------------------ccc-c-cccccc-ccc-----cC------CCC
Confidence 000 0 000000 000 00 001
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH-Hhh
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW-YRK 1068 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~ 1068 (1230)
.-|+++|++. .+|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+||.++...+... +|+
T Consensus 267 ~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 338 (510)
T PRK15439 267 PVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLAR 338 (510)
T ss_pred ceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhC
Confidence 1489999983 1699999999999999999999999999999999999999999999999998776654 466
Q ss_pred cceEEcccc---cCCc-ccHHHHhccC---C-CC-CCHHHHHHHHHHhchHHHHHhcccccc-ccccCCCCCCChhHHHH
Q 000909 1069 HTALVSQEP---VIYA-GNIRDNIVFG---K-LD-ASENEVVEAARAANAHEFISSLKDGYE-TECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1069 ~i~~VpQdp---~Lf~-gTIreNl~~g---~-~~-~sd~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQrQr 1138 (1230)
+++||||++ .+|. .|+.+|+... . +. ....+.. ..+.++++.+ |++ .........||||||||
T Consensus 339 ~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqr 411 (510)
T PRK15439 339 GLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAREN-----AVLERYRRAL--NIKFNHAEQAARTLSGGNQQK 411 (510)
T ss_pred CcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHH-----HHHHHHHHHc--CCCCCCccCccccCCcHHHHH
Confidence 899999996 3665 4999998532 0 00 0111111 1123334443 333 23344556899999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
++||||++.+|+||||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+++++.
T Consensus 412 l~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 491 (510)
T PRK15439 412 VLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAIN 491 (510)
T ss_pred HHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCC
Confidence 999999999999999999999999999999999999864 48999999999999975 7999999999999999998765
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
.+
T Consensus 492 ~~ 493 (510)
T PRK15439 492 VD 493 (510)
T ss_pred HH
Confidence 33
No 80
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.8e-72 Score=684.14 Aligned_cols=459 Identities=23% Similarity=0.353 Sum_probs=351.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CCceEEECCeecCCCCHHH-Hhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA--DDGIVRIDGVDIRRLQLKW-VRR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~i~~~~~~~-~r~ 431 (1230)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 789999999963 3599999999999999999999999999999999999987 7999999999998776544 456
Q ss_pred heEEEccCccccch-hHHHHHhcCCCC------CCHHHHHHHHHHHhHHHHHHhCCCcccchh-cCCCCCCChhHHHHHH
Q 000909 432 EMGLVSQEHALFGT-SIKDNIMFGKLD------ATMDEVIAAATAANAHNFIRQLPEGYETKV-GERGALLSGGQKQRIA 503 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~~-ti~~Ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~LSgGqkqri~ 503 (1230)
.++||+|++.++.. |++||+.++... ...++.. ..+.+.++.+ |++... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 89999999988865 999999986421 1112211 2234456665 554332 3456789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 504 IARAIIKNPVILLLDEATSALDSESETLVQNALDQA-SLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 504 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|||||+.+|++|||||||++||+.+...+.+.|+++ .+|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 999999999999999999999999999999999876 358899999999999876 999999999999876532211000
Q ss_pred cCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhhh
Q 000909 582 IDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPEW 661 (1230)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1230)
..
T Consensus 232 ------~~------------------------------------------------------------------------ 233 (500)
T TIGR02633 232 ------DI------------------------------------------------------------------------ 233 (500)
T ss_pred ------HH------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 662 KQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIR 741 (1230)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (1230)
...
T Consensus 234 ---------------------------~~~-------------------------------------------------- 236 (500)
T TIGR02633 234 ---------------------------ITM-------------------------------------------------- 236 (500)
T ss_pred ---------------------------HHH--------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 742 LRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTI 821 (1230)
Q Consensus 742 ~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~ 821 (1230)
. +. .
T Consensus 237 ------~-------~~--~------------------------------------------------------------- 240 (500)
T TIGR02633 237 ------M-------VG--R------------------------------------------------------------- 240 (500)
T ss_pred ------H-------hC--c-------------------------------------------------------------
Confidence 0 00 0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 822 LCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLT 901 (1230)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1230)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T TIGR02633 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCC
Q 000909 902 FMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTR 981 (1230)
Q Consensus 902 ~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~ 981 (1230)
.. .+..+.. ...
T Consensus 241 ------------------~~---------------------------------------------~~~~~~~-----~~~ 252 (500)
T TIGR02633 241 ------------------EI---------------------------------------------TSLYPHE-----PHE 252 (500)
T ss_pred ------------------cc---------------------------------------------ccccccc-----ccC
Confidence 00 0000000 000
Q ss_pred CCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-CCCeEEECCeecCC
Q 000909 982 GSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-EQGSVRVDGMDVRE 1060 (1230)
Q Consensus 982 ~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-~~G~I~idG~di~~ 1060 (1230)
...--|+++|++++|+...+.++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 253 -----~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~ 327 (500)
T TIGR02633 253 -----IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDI 327 (500)
T ss_pred -----CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCC
Confidence 001148999999999422123599999999999999999999999999999999999995 89999999999875
Q ss_pred CCh-HHHhhcceEEcccc---cCCc-ccHHHHhccCCCC-------CCHHHHHHHHHHhchHHHHHhccccccc-cccCC
Q 000909 1061 LDV-HWYRKHTALVSQEP---VIYA-GNIRDNIVFGKLD-------ASENEVVEAARAANAHEFISSLKDGYET-ECGER 1127 (1230)
Q Consensus 1061 i~~-~~lR~~i~~VpQdp---~Lf~-gTIreNl~~g~~~-------~sd~ei~~al~~a~l~~~i~~lp~gldt-~vge~ 1127 (1230)
.+. ..+|++++||||++ .+|. .|+++|+.++... ...++. ...+.++++.+ |+.. .....
T Consensus 328 ~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~ 400 (500)
T TIGR02633 328 RNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAE-----LQIIGSAIQRL--KVKTASPFLP 400 (500)
T ss_pred CCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHH-----HHHHHHHHHhc--CccCCCccCc
Confidence 443 56788999999997 3665 5999999875210 011111 11122333333 2221 12334
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcE
Q 000909 1128 GVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGR 1205 (1230)
Q Consensus 1128 G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~ 1205 (1230)
...||||||||++||||++++|++|||||||++||+.+.+.+.+.+++.. +|.|+|+|||+++.+.. ||+|++|++|+
T Consensus 401 ~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~ 480 (500)
T TIGR02633 401 IGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGK 480 (500)
T ss_pred cccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 56799999999999999999999999999999999999999999998864 48899999999999875 79999999999
Q ss_pred EEEecCHhH
Q 000909 1206 VVERGTYAQ 1214 (1230)
Q Consensus 1206 Ive~Gt~~e 1214 (1230)
++..++.++
T Consensus 481 i~~~~~~~~ 489 (500)
T TIGR02633 481 LKGDFVNHA 489 (500)
T ss_pred EEEEEcccc
Confidence 998876544
No 81
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-72 Score=685.01 Aligned_cols=456 Identities=23% Similarity=0.364 Sum_probs=351.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH-HHHhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL-KWVRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~-~~~r~~ 432 (1230)
-|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 359999999999999999999999999999999999999999999999999876543 456788
Q ss_pred eEEEccCccccch-hHHHHHhcCCCC-----CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLD-----ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
|+||+|++.++.. |++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999988875 999999986421 1112211 2234556666 6655566777899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCc
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDG 584 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 584 (1230)
||+.+|+++||||||++||+.+.+.+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.++..+....
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~--- 230 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVDR--- 230 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCCH---
Confidence 9999999999999999999999999999998764 58999999999999866 999999999999864421100000
Q ss_pred HHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhhhHHH
Q 000909 585 HYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPEWKQG 664 (1230)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1230)
T Consensus 231 -------------------------------------------------------------------------------- 230 (501)
T PRK11288 231 -------------------------------------------------------------------------------- 230 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 665 LIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRM 744 (1230)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 744 (1230)
.. +
T Consensus 231 ---------------------------------~~--------------------------------------------~ 233 (501)
T PRK11288 231 ---------------------------------DQ--------------------------------------------L 233 (501)
T ss_pred ---------------------------------HH--------------------------------------------H
Confidence 00 0
Q ss_pred HHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 745 LEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCF 824 (1230)
Q Consensus 745 ~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~ 824 (1230)
.+.+ .. ..
T Consensus 234 ~~~~-------~~--~~--------------------------------------------------------------- 241 (501)
T PRK11288 234 VQAM-------VG--RE--------------------------------------------------------------- 241 (501)
T ss_pred HHHh-------cC--CC---------------------------------------------------------------
Confidence 0000 00 00
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 825 YTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMS 904 (1230)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (1230)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCC
Q 000909 905 WALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSK 984 (1230)
Q Consensus 905 ~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1230)
. . ......+ ..
T Consensus 242 ----------------~------------------------------------~------~~~~~~~-------~~---- 252 (501)
T PRK11288 242 ----------------I------------------------------------G------DIYGYRP-------RP---- 252 (501)
T ss_pred ----------------c------------------------------------c------ccccccc-------cC----
Confidence 0 0 0000000 00
Q ss_pred cccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh-
Q 000909 985 LQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV- 1063 (1230)
Q Consensus 985 ~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~- 1063 (1230)
.....++++|++++ .+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.
T Consensus 253 --~~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~ 323 (501)
T PRK11288 253 --LGEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPR 323 (501)
T ss_pred --CCCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHH
Confidence 00114889999842 38999999999999999999999999999999999999999999999999875543
Q ss_pred HHHhhcceEEccccc---CCc-ccHHHHhccCCCCC--------CHHHHHHHHHHhchHHHHHhcccccc-ccccCCCCC
Q 000909 1064 HWYRKHTALVSQEPV---IYA-GNIRDNIVFGKLDA--------SENEVVEAARAANAHEFISSLKDGYE-TECGERGVQ 1130 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~---Lf~-gTIreNl~~g~~~~--------sd~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~ 1130 (1230)
+..|++++|+||+|. +|. .|+.||+.++.... ...+.. ..+.+++..+ |++ ........+
T Consensus 324 ~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~ 396 (501)
T PRK11288 324 DAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEA-----ENADRFIRSL--NIKTPSREQLIMN 396 (501)
T ss_pred HHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHH-----HHHHHHHHhc--CcccCCccCcccc
Confidence 456789999999973 554 79999998652110 111111 1122333333 231 122344568
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEE
Q 000909 1131 LSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVE 1208 (1230)
Q Consensus 1131 LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive 1208 (1230)
||||||||++||||++.+|++|||||||++||+.+.+.+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|++++
T Consensus 397 LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~ 476 (501)
T PRK11288 397 LSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAG 476 (501)
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998865 48899999999999865 79999999999999
Q ss_pred ecCHhHHh
Q 000909 1209 RGTYAQLT 1216 (1230)
Q Consensus 1209 ~Gt~~eLl 1216 (1230)
.|+++|..
T Consensus 477 ~~~~~~~~ 484 (501)
T PRK11288 477 ELAREQAT 484 (501)
T ss_pred EEccccCC
Confidence 99988754
No 82
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.4e-70 Score=729.19 Aligned_cols=501 Identities=18% Similarity=0.254 Sum_probs=414.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHH
Q 000909 84 LAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASV 163 (1230)
Q Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~ 163 (1230)
++..++.+++.+++.+.+.+...++|.++++++++.|++||++ .++| +++||+++|++.+++.+...+..++..++.
T Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~-~~~G--~ilnRfs~Di~~id~~l~~~~~~~~~~~~~ 1012 (1490)
T TIGR01271 936 DSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT-MKAG--RILNRFTKDMAIIDDMLPLTLFDFIQLTLI 1012 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566778888888999999999999999999999999996 5666 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHH
Q 000909 164 FISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEA 243 (1230)
Q Consensus 164 ~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~ 243 (1230)
+++.++++++++|.+++++++++++++++..++.+..+...+......+...+.+.|+++|+.+||+|++++.+.+++.+
T Consensus 1013 ~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~ 1092 (1490)
T TIGR01271 1013 VLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHK 1092 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHH
Confidence 99999999999998766555554444555556666666667667777888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 244 ILDSTTKLGIKQGTAKGLAVGST-GLSF--AIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTE 320 (1230)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (1230)
..+...+..........+..... .+.. ...+.+++++. .....|.+..++.+...+..++..+...+..+..
T Consensus 1093 ~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~ 1167 (1490)
T TIGR01271 1093 ALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDG 1167 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88866554433322222222111 1111 11111122222 1234455555555566666677778888888999
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCC--------------Cc--ccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCC
Q 000909 321 ASIAASRIFDRIDRVPEIDGEDTK--------------GL--VLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGK 384 (1230)
Q Consensus 321 ~~~s~~ri~~~l~~~~~~~~~~~~--------------~~--~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~ 384 (1230)
.+.+++|+.++++.+++.+..... .. ...+..|.|+|+||+|+|++. .+++|+|+||+|+|||
T Consensus 1168 ~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~Ge 1246 (1490)
T TIGR01271 1168 LMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQ 1246 (1490)
T ss_pred HHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCC
Confidence 999999999999765543211100 00 012345789999999999753 4679999999999999
Q ss_pred EEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHH
Q 000909 385 SVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVI 464 (1230)
Q Consensus 385 ~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~ 464 (1230)
++||||+||||||||+++|+|+++ ++|+|++||+|+++++.+++|++|+||||||.||+||||+||.... +.++++++
T Consensus 1247 kvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~ 1324 (1490)
T TIGR01271 1247 RVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIW 1324 (1490)
T ss_pred EEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHH
Confidence 999999999999999999999997 7999999999999999999999999999999999999999997543 56899999
Q ss_pred HHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCe
Q 000909 465 AAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRT 544 (1230)
Q Consensus 465 ~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t 544 (1230)
++++.+++++++.++|+|+||.+|++|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|
T Consensus 1325 ~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~T 1404 (1490)
T TIGR01271 1325 KVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCT 1404 (1490)
T ss_pred HHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred EEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHHhhcc
Q 000909 545 TLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQRQF 596 (1230)
Q Consensus 545 ~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~ 596 (1230)
+|+||||++++.+||+|+||++|+|+|.|+|++|+++ ++.|+++++.+...
T Consensus 1405 vI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~~~ 1455 (1490)
T TIGR01271 1405 VILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAADRL 1455 (1490)
T ss_pred EEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhChh
Confidence 9999999999999999999999999999999999984 89999998765543
No 83
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.2e-68 Score=703.92 Aligned_cols=220 Identities=24% Similarity=0.389 Sum_probs=191.6
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
..|+++|+++.|+++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +...+|+.
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 469999999999632 3569999999999999999999999999999999999999999999999999965 45667889
Q ss_pred eEEEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
+|||||++.+|+. |++|||.++.. ..+.++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~-----~~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQ-----LEMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999875 99999987421 11222221 2234556666 7777788888999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
.+|+|+|||||||+||+.+++.+.+.|++..+|+|+|++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999999988779999999999999976 999999999999999999998754
No 84
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-71 Score=675.07 Aligned_cols=454 Identities=22% Similarity=0.329 Sum_probs=350.5
Q ss_pred EEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH-HHHhhheEE
Q 000909 357 FEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL-KWVRREMGL 435 (1230)
Q Consensus 357 ~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~-~~~r~~i~~ 435 (1230)
++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+++.++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 459999999999999999999999999999999999999999999999999976654 445778999
Q ss_pred EccCccccc-hhHHHHHhcCCCCC-----CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 436 VSQEHALFG-TSIKDNIMFGKLDA-----TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 436 v~Q~~~l~~-~ti~~Ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
|+|++.++. .|++||+.++.... +.++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 999998775 49999999764211 111111 2234556666 6766677788899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHHH
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHYA 587 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 587 (1230)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------ 224 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------ 224 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH------
Confidence 9999999999999999999999999998863 58999999999999865 999999999999987765443110
Q ss_pred HHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhhhHHHHHH
Q 000909 588 KMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPEWKQGLIG 667 (1230)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (1230)
....
T Consensus 225 ~~~~---------------------------------------------------------------------------- 228 (491)
T PRK10982 225 KIIA---------------------------------------------------------------------------- 228 (491)
T ss_pred HHHH----------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 668 SLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEK 747 (1230)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 747 (1230)
.
T Consensus 229 -------------------------------------------------------------------------------~ 229 (491)
T PRK10982 229 -------------------------------------------------------------------------------M 229 (491)
T ss_pred -------------------------------------------------------------------------------H
Confidence 0
Q ss_pred HHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 748 ILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTR 827 (1230)
Q Consensus 748 ~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~ 827 (1230)
+ +. ..
T Consensus 230 ~-------~~--~~------------------------------------------------------------------ 234 (491)
T PRK10982 230 M-------VG--RS------------------------------------------------------------------ 234 (491)
T ss_pred H-------hC--CC------------------------------------------------------------------
Confidence 0 00 00
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 828 KVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWAL 907 (1230)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1230)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCccc
Q 000909 908 DFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQK 987 (1230)
Q Consensus 908 ~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1230)
. .+ ..+ . +. .. +
T Consensus 235 -------------~------------------------------------~~-----~~~-~-~~------~~------~ 246 (491)
T PRK10982 235 -------------L------------------------------------TQ-----RFP-D-KE------NK------P 246 (491)
T ss_pred -------------c------------------------------------cc-----ccc-c-cc------CC------C
Confidence 0 00 000 0 00 00 0
Q ss_pred ccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChH-HH
Q 000909 988 ISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVH-WY 1066 (1230)
Q Consensus 988 ~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~-~l 1066 (1230)
....|+++||+++|. ++|+|+||+|++||++||+|+||||||||+++|+|+.+|++|+|.+||.++...+.. .+
T Consensus 247 ~~~~i~~~~l~~~~~-----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 321 (491)
T PRK10982 247 GEVILEVRNLTSLRQ-----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAI 321 (491)
T ss_pred CCcEEEEeCcccccC-----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHH
Confidence 011489999999851 489999999999999999999999999999999999999999999999999877654 45
Q ss_pred hhcceEEccccc---CCc-ccHHHHhccC-----CC--C-CCHHHHHHHHHHhchHHHHHhcccccc-ccccCCCCCCCh
Q 000909 1067 RKHTALVSQEPV---IYA-GNIRDNIVFG-----KL--D-ASENEVVEAARAANAHEFISSLKDGYE-TECGERGVQLSG 1133 (1230)
Q Consensus 1067 R~~i~~VpQdp~---Lf~-gTIreNl~~g-----~~--~-~sd~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSg 1133 (1230)
|+.++|+||++. +|. .|+++|..+. .. . .+.++..+ ...++++.+ |+. ........+|||
T Consensus 322 ~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSg 394 (491)
T PRK10982 322 NHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKS-----DTQWVIDSM--RVKTPGHRTQIGSLSG 394 (491)
T ss_pred HCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHH-----HHHHHHHhc--CccCCCcccccccCCc
Confidence 778999999963 555 4777763221 11 1 11111111 122334443 221 123455668999
Q ss_pred hHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecC
Q 000909 1134 GQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1134 GQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1211 (1230)
|||||++||||++++|+||||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. |||+++|++|+++..++
T Consensus 395 Gq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~ 474 (491)
T PRK10982 395 GNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVD 474 (491)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEc
Confidence 99999999999999999999999999999999999999998864 58999999999999865 79999999999998887
Q ss_pred HhHHh
Q 000909 1212 YAQLT 1216 (1230)
Q Consensus 1212 ~~eLl 1216 (1230)
.+++.
T Consensus 475 ~~~~~ 479 (491)
T PRK10982 475 TKTTT 479 (491)
T ss_pred cccCC
Confidence 65443
No 85
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.4e-70 Score=669.63 Aligned_cols=452 Identities=22% Similarity=0.290 Sum_probs=346.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 4 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 4 LQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred EEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 889999999963 34999999999999999999999999999999999999999999999998887777667778899
Q ss_pred EEccCccc--c-------chhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 435 LVSQEHAL--F-------GTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 435 ~v~Q~~~l--~-------~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
|++|++.+ + ..|+++|+.++. ... ..+.+.++.+ |++........+||||||||++||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDP---------ARCEQLAQQF--GITALLDRRFKYLSTGETRKTLLC 147 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch--hHH---------HHHHHHHHHc--CCHhhhhCCcccCCHHHHHHHHHH
Confidence 99998753 2 358888876531 001 1123445555 666666778889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcC
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRID 583 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 583 (1230)
|||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+++++.+.
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-- 225 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ-- 225 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc--
Confidence 99999999999999999999999999999998864 47899999999999876 999999999999998887765431
Q ss_pred cHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhhhHH
Q 000909 584 GHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPEWKQ 663 (1230)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (1230)
.....+...+
T Consensus 226 ~~~~~~~~~~---------------------------------------------------------------------- 235 (490)
T PRK10938 226 ALVAQLAHSE---------------------------------------------------------------------- 235 (490)
T ss_pred hhhhhhhhhh----------------------------------------------------------------------
Confidence 0000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 664 GLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLR 743 (1230)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (1230)
T Consensus 236 -------------------------------------------------------------------------------- 235 (490)
T PRK10938 236 -------------------------------------------------------------------------------- 235 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 744 MLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILC 823 (1230)
Q Consensus 744 l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~ 823 (1230)
+ + .. ...+
T Consensus 236 ---~-----~--~~-~~~~------------------------------------------------------------- 243 (490)
T PRK10938 236 ---Q-----L--EG-VQLP------------------------------------------------------------- 243 (490)
T ss_pred ---c-----c--Cc-cccC-------------------------------------------------------------
Confidence 0 0 00 0000
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 824 FYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFM 903 (1230)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (1230)
T Consensus 244 -------------------------------------------------------------------------------- 243 (490)
T PRK10938 244 -------------------------------------------------------------------------------- 243 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCC
Q 000909 904 SWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGS 983 (1230)
Q Consensus 904 ~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~ 983 (1230)
+ .. ++..+. .. .
T Consensus 244 -------------------------------------------------------~----~~-~~~~~~------~~-~- 255 (490)
T PRK10938 244 -------------------------------------------------------E----PD-EPSARH------AL-P- 255 (490)
T ss_pred -------------------------------------------------------c----cc-cccccc------cc-C-
Confidence 0 00 000000 00 0
Q ss_pred CcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-CCCeEEECCeecCC-C
Q 000909 984 KLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-EQGSVRVDGMDVRE-L 1061 (1230)
Q Consensus 984 ~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-~~G~I~idG~di~~-i 1061 (1230)
.....|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+.+| ++|+|.++|.++.. .
T Consensus 256 ---~~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~ 329 (490)
T PRK10938 256 ---ANEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGE 329 (490)
T ss_pred ---CCCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCC
Confidence 01124999999999963 3599999999999999999999999999999999998876 69999999987632 2
Q ss_pred ChHHHhhcceEEcccccCCc---ccHHHHhccCCC-------CCC---HHHHHHHHHHhchHHHHHhccccccccccCCC
Q 000909 1062 DVHWYRKHTALVSQEPVIYA---GNIRDNIVFGKL-------DAS---ENEVVEAARAANAHEFISSLKDGYETECGERG 1128 (1230)
Q Consensus 1062 ~~~~lR~~i~~VpQdp~Lf~---gTIreNl~~g~~-------~~s---d~ei~~al~~a~l~~~i~~lp~gldt~vge~G 1128 (1230)
+....|++++|+||++.++. .|+++++.++.. ... ++++.++++..++.+. ......
T Consensus 330 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~ 399 (490)
T PRK10938 330 TIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKR----------TADAPF 399 (490)
T ss_pred CHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchh----------hccCch
Confidence 34457889999999987642 477777653210 111 1234455555544320 223345
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC-C-CeEEEEccCchhhhh--cCEEEEEeCc
Q 000909 1129 VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM-G-RTTIVVAHRLNTIKK--LDSIALVADG 1204 (1230)
Q Consensus 1129 ~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~-~TvI~IaHrl~ti~~--~D~I~vl~~G 1204 (1230)
..||||||||++||||++++|++|||||||++||+++.+.+.+.|++..+ + .|+|+|||+++.+.. ||++++|++|
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G 479 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDG 479 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCC
Confidence 67999999999999999999999999999999999999999999998753 4 469999999999975 6999999999
Q ss_pred EEEEec
Q 000909 1205 RVVERG 1210 (1230)
Q Consensus 1205 ~Ive~G 1210 (1230)
+|++.-
T Consensus 480 ~i~~~~ 485 (490)
T PRK10938 480 DIYRYV 485 (490)
T ss_pred ceEEee
Confidence 998754
No 86
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-69 Score=661.78 Aligned_cols=487 Identities=19% Similarity=0.318 Sum_probs=349.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ..|+
T Consensus 2 l~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~ 67 (530)
T PRK15064 2 LSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLG 67 (530)
T ss_pred EEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 789999999963 45999999999999999999999999999999999999999999999972 3699
Q ss_pred EEccCccccch-hHHHHHhcCCCCC----------------CHH------HHHH-------HHHHHhHHHHHHhCCCccc
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKLDA----------------TMD------EVIA-------AATAANAHNFIRQLPEGYE 484 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~~~----------------~~~------~~~~-------~~~~~~~~~~i~~l~~g~~ 484 (1230)
|++|++.++.. |++||+.++.... ..+ +..+ ......+.+.++.+ |++
T Consensus 68 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~ 145 (530)
T PRK15064 68 KLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIP 145 (530)
T ss_pred EEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCC
Confidence 99999988765 9999998753100 000 0000 00112344556666 665
Q ss_pred chh-cCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEE
Q 000909 485 TKV-GERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIA 562 (1230)
Q Consensus 485 t~~-~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~ 562 (1230)
... .....+||||||||++|||||+.+|++|||||||++||+++...+.+.|.+ .++|+|+|||+++.+.. ||+|+
T Consensus 146 ~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 146 EEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEE
Confidence 433 356789999999999999999999999999999999999999999999975 47899999999999876 99999
Q ss_pred EEeCCeEE-EecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCC
Q 000909 563 VVDNGCLV-EIGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQ 641 (1230)
Q Consensus 563 ~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1230)
+|++|+++ ..|++++.++.....+....+...
T Consensus 224 ~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~----------------------------------------------- 256 (530)
T PRK15064 224 DLDYGELRVYPGNYDEYMTAATQARERLLADNA----------------------------------------------- 256 (530)
T ss_pred EEeCCEEEEecCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------------
Confidence 99999994 788888775420000000000000
Q ss_pred CCCCCchHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHH
Q 000909 642 PVTYLPPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAF 721 (1230)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1230)
...
T Consensus 257 ---------------------------------------------------------~~~-------------------- 259 (530)
T PRK15064 257 ---------------------------------------------------------KKK-------------------- 259 (530)
T ss_pred ---------------------------------------------------------HHH--------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 722 NLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIM 801 (1230)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 801 (1230)
T Consensus 260 -------------------------------------------------------------------------------- 259 (530)
T PRK15064 260 -------------------------------------------------------------------------------- 259 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHH
Q 000909 802 GLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRK 881 (1230)
Q Consensus 802 ~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~ 881 (1230)
.+..+.. .. + .+..........
T Consensus 260 ----------------------------------~~~~~~~----~~----~----------------~~~~~~~~~~~~ 281 (530)
T PRK15064 260 ----------------------------------AQIAELQ----SF----V----------------SRFSANASKAKQ 281 (530)
T ss_pred ----------------------------------HHHHHHH----HH----H----------------HHhhccchhhHH
Confidence 0000000 00 0 000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 882 QARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVF 961 (1230)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~ 961 (1230)
+.....++.
T Consensus 282 -----------------------------------------------------------------------~~~~~~~~~ 290 (530)
T PRK15064 282 -----------------------------------------------------------------------ATSRAKQID 290 (530)
T ss_pred -----------------------------------------------------------------------HHHHHHHHh
Confidence 000000010
Q ss_pred HHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHh
Q 000909 962 KILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQ 1041 (1230)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1041 (1230)
+. +..+..+..........+......+..|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+
T Consensus 291 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~ 366 (530)
T PRK15064 291 KI-KLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLV 366 (530)
T ss_pred hc-cccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHh
Confidence 00 000000000000000000000001235999999999963 35999999999999999999999999999999999
Q ss_pred ccccCCCCeEEECCeecCCCChHHHhhcceEEccccc--CCc-ccHHHHhccCC-CCCCHHHHHHHHHHhchH-HHHHhc
Q 000909 1042 RFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPV--IYA-GNIRDNIVFGK-LDASENEVVEAARAANAH-EFISSL 1116 (1230)
Q Consensus 1042 rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~--Lf~-gTIreNl~~g~-~~~sd~ei~~al~~a~l~-~~i~~l 1116 (1230)
|+++|++|+|.++| +++++|+||++. ++. .|+++|+.+.. +...++++.++++..++. +..
T Consensus 367 G~~~p~~G~i~~~~-----------~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~--- 432 (530)
T PRK15064 367 GELEPDSGTVKWSE-----------NANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDI--- 432 (530)
T ss_pred CCCCCCCeEEEECC-----------ceEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHh---
Confidence 99999999999998 257999999984 443 59999986422 222345566777776652 222
Q ss_pred cccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-c
Q 000909 1117 KDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-L 1195 (1230)
Q Consensus 1117 p~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~ 1195 (1230)
.....+||||||||++||||++++|+||||||||++||+.+...+.+.|++. +.|+|+|||+++.+.. |
T Consensus 433 --------~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~ 502 (530)
T PRK15064 433 --------KKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLA 502 (530)
T ss_pred --------cCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhC
Confidence 2345679999999999999999999999999999999999999999999886 5699999999999875 7
Q ss_pred CEEEEEeCcEEE-EecCHhHHhhccc
Q 000909 1196 DSIALVADGRVV-ERGTYAQLTHMRG 1220 (1230)
Q Consensus 1196 D~I~vl~~G~Iv-e~Gt~~eLl~~~g 1220 (1230)
|+|++|++|+++ ..|+++++++.+|
T Consensus 503 d~i~~l~~g~i~~~~g~~~~~~~~~~ 528 (530)
T PRK15064 503 TRIIEITPDGVVDFSGTYEEYLRSQG 528 (530)
T ss_pred CEEEEEECCeEEEcCCCHHHHHHHhC
Confidence 999999999998 7899999987765
No 87
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.6e-68 Score=594.61 Aligned_cols=523 Identities=23% Similarity=0.325 Sum_probs=449.6
Q ss_pred HHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 37 MSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAV 116 (1230)
Q Consensus 37 ~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 116 (1230)
++....|+++-++-|.+.... + ...+....++.+++.++..++.+++.....+++.++...+...+|...
T Consensus 37 iL~L~~~lyMLQVyDRVL~S~------s----~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~ 106 (580)
T COG4618 37 LLALTGPLYMLQVYDRVLPSR------S----VPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAAS 106 (580)
T ss_pred HHHHhhhHHHHHHHhhhccCC------C----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 344444566667777765321 1 122333334445555666778889999999999999999999999999
Q ss_pred HcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000909 117 LRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIY 196 (1230)
Q Consensus 117 ~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~ 196 (1230)
.+.+..--. .| +=.+ .-+|.++++.|++..-+..+.+.-.+.+.+.++|.+++++.++.++...+++.+.++-
T Consensus 107 ~~~~l~~~~----~g--~~~Q-~LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln 179 (580)
T COG4618 107 FSAPLLRRG----SG--DGLQ-PLRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLN 179 (580)
T ss_pred HhhHHhhcC----CC--cccc-chhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877764322 22 2222 3359999999998765555555555666788889999999999888888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000909 197 GKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAF 275 (1230)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 275 (1230)
.+..++-.++..+...+.+...+-..++..+|++.|......++|.+.+..+.....+.+-..+.+.... .+-.+....
T Consensus 180 ~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~ 259 (580)
T COG4618 180 ERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSA 259 (580)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888889999999999999999999999999999999999999999988887777777666666 666677778
Q ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccCCccccE
Q 000909 276 LAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEI 355 (1230)
Q Consensus 276 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i 355 (1230)
++..|+++++.|++|.|.+++....+.....|+-.....+..+..++.|.+|+.+++...|+..+ ..+.+..++.+
T Consensus 260 iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~g~L 335 (580)
T COG4618 260 VLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQGAL 335 (580)
T ss_pred HHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCCcee
Confidence 88899999999999999999988888888889999999999999999999999999988765432 23445667899
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEE
Q 000909 356 EFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGL 435 (1230)
Q Consensus 356 ~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~ 435 (1230)
.++++++.=|+. ++++++|+||++++||.+|||||||||||||.++|.|.++|.+|.|.+||-|+++.+.+.+-++|||
T Consensus 336 ~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGY 414 (580)
T COG4618 336 SVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGY 414 (580)
T ss_pred eEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCc
Confidence 999999976654 5789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000909 436 VSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVIL 515 (1230)
Q Consensus 436 v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~il 515 (1230)
.|||..||+|||+|||+-..++.+.+++.+|++.++.||.|.++|+||||.+|+.|..|||||||||+||||+|.||.++
T Consensus 415 LPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 415 LPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred CcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEE
Confidence 99999999999999999555678889999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhh
Q 000909 516 LLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 516 llDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+||||-|+||.+.|..+.++|...+ +|.|+|+||||++.+..+|+|++|++|++...|+.+|.+++
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999998754 69999999999999999999999999999999999999875
No 88
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.3e-68 Score=710.28 Aligned_cols=212 Identities=24% Similarity=0.414 Sum_probs=181.6
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCCCeEEECCeecCCCChHHH
Q 000909 991 KIEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD---VEQGSVRVDGMDVRELDVHWY 1066 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~l 1066 (1230)
.++++||+++|+.++ ++++|+|||++|+|||++||+||||||||||+++|.|+.+ |++|+|.+||+++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 379999999996322 3469999999999999999999999999999999999998 78899999999985 257
Q ss_pred hhcceEEccccc-CCcccHHHHhccCC----C-CCCHHH----HHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1067 RKHTALVSQEPV-IYAGNIRDNIVFGK----L-DASENE----VVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1067 R~~i~~VpQdp~-Lf~gTIreNl~~g~----~-~~sd~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
|++++||||++. ++..||||||.++. | +.++++ +.++++..++.+ -.|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHh
Confidence 899999999875 45679999998642 2 233333 445555555543 368899988889999999
Q ss_pred HHHHHHHHHccCCC-EEEeecccCCcCHHHHHHHHHHHHHh-cCCCeEEEEccCchhh--hhcCEEEEEeCc-EEEEecC
Q 000909 1137 QRIAIARAIIRNPT-ILLLDEATSALDVQSEQVVQEALDRI-MMGRTTIVVAHRLNTI--KKLDSIALVADG-RVVERGT 1211 (1230)
Q Consensus 1137 QrlalARAll~~p~-ILlLDEaTSaLD~~te~~I~~~l~~~-~~~~TvI~IaHrl~ti--~~~D~I~vl~~G-~Ive~Gt 1211 (1230)
||++|||||+++|+ ||+||||||+||+.+...|++.|++. .+|+|||+++|+++.. ..+|+|++|++| ++++.|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 99999999999999999999999987 4689999999999974 578999999997 9999999
Q ss_pred Hh
Q 000909 1212 YA 1213 (1230)
Q Consensus 1212 ~~ 1213 (1230)
+.
T Consensus 988 ~~ 989 (1394)
T TIGR00956 988 LG 989 (1394)
T ss_pred cc
Confidence 74
No 89
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=4.8e-66 Score=636.93 Aligned_cols=476 Identities=18% Similarity=0.198 Sum_probs=380.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 717 ISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVA 796 (1230)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~ 796 (1230)
+..++.++..++...++.++..++|.+++++++++|++||+ ++++|++++|+++|++.+...+. .+..++..++.++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~--~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i 136 (547)
T PRK10522 60 LLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIE--QLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTL 136 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh--ccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHH
Confidence 33456678888999999999999999999999999999998 78899999999999999998665 4667778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchH---HHHHHHHH
Q 000909 797 IAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSA---GKVLQIFD 873 (1230)
Q Consensus 797 ~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~---~~~~~~~~ 873 (1230)
+++++++.++|.++++++++.|+.++..++..+.......+..+..++..+.+.|.+.|+++++ ++.+ +.+.++++
T Consensus 137 ~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~ 215 (547)
T PRK10522 137 GSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYE 215 (547)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHh
Confidence 8888999999999999999988888777777666666677777788888999999999999995 4433 45677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 874 EAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKG 953 (1230)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1230)
+..++..+...+..+.......+.........++.+++++.. ..+ +.+.+..+..+......++..+...+.++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~ 292 (547)
T PRK10522 216 PDAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL-GWA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSA 292 (547)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777665555444444333333333323333333343332 112 33333333333444567889999999999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCH
Q 000909 954 STAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGK 1033 (1230)
Q Consensus 954 ~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGK 1033 (1230)
..+.+|+.++.+.+++.+.. . ..+ .+..+.|+|+||+|+||+ ++++|+|+||+|+|||++||||||||||
T Consensus 293 ~~a~~ri~~l~~~~~~~~~~-----~--~~~-~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGK 362 (547)
T PRK10522 293 QVAFNKLNKLALAPYKAEFP-----R--PQA-FPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGK 362 (547)
T ss_pred HHHHHHHHHHhccccccccc-----c--ccc-cCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCH
Confidence 99999999987643321110 0 001 111357999999999974 2469999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHH
Q 000909 1034 STVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFI 1113 (1230)
Q Consensus 1034 STL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i 1113 (1230)
|||+++|+|+|+|++|+|.+||+|+++++.+++|++++||||||.+|++|+++| + ++.++++++++++.+++.+++
T Consensus 363 STL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~ 438 (547)
T PRK10522 363 STLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKL 438 (547)
T ss_pred HHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhh
Confidence 999999999999999999999999999999999999999999999999999999 2 467788888888888887766
Q ss_pred HhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchh
Q 000909 1114 SSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNT 1191 (1230)
Q Consensus 1114 ~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~t 1191 (1230)
. .|+|. .+|.+||||||||++||||++++|+|||||||||+||+++|+.+.+.+.+.. +++|+|+||||+++
T Consensus 439 ~-~~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~ 512 (547)
T PRK10522 439 E-LEDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHY 512 (547)
T ss_pred h-ccccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHH
Confidence 4 24442 1478999999999999999999999999999999999999999999987654 48999999999999
Q ss_pred hhhcCEEEEEeCcEEEEe-cCHhHHhhcc
Q 000909 1192 IKKLDSIALVADGRVVER-GTYAQLTHMR 1219 (1230)
Q Consensus 1192 i~~~D~I~vl~~G~Ive~-Gt~~eLl~~~ 1219 (1230)
+..||+|++|++|+++|. |++.+-..++
T Consensus 513 ~~~~d~i~~l~~G~i~e~~~~~~~~~~~~ 541 (547)
T PRK10522 513 FIHADRLLEMRNGQLSELTGEERDAASRD 541 (547)
T ss_pred HHhCCEEEEEECCEEEEecCCchhhhhhh
Confidence 999999999999999987 6666554443
No 90
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.3e-67 Score=646.45 Aligned_cols=484 Identities=22% Similarity=0.305 Sum_probs=340.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
-|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----------~~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----------GIKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 5899999999962 24599999999999999999999999999999999999999999999975 2469
Q ss_pred EEEccCccccch-hHHHHHhcCCCC----------------CC----------HHHHHHHHH-------HHhHHHHHHhC
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLD----------------AT----------MDEVIAAAT-------AANAHNFIRQL 479 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~----------------~~----------~~~~~~~~~-------~~~~~~~i~~l 479 (1230)
|||+|+|.+++. |++||+.++... .. ..++.+.+. ...+.+.++.+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999999875 999999875210 00 001111111 11233444554
Q ss_pred CCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-c
Q 000909 480 PEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-A 558 (1230)
Q Consensus 480 ~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 558 (1230)
|++ .......+||||||||++||||++.+|++||||||||+||+.+...+.+.|++.. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 553 2466778999999999999999999999999999999999999999999998763 599999999999976 9
Q ss_pred CEEEEEeCCeEE-EecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCC
Q 000909 559 DLIAVVDNGCLV-EIGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVI 637 (1230)
Q Consensus 559 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1230)
|+|++|++|+++ ..|+++++.+............
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~--------------------------------------------- 262 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQKAKRLAQEEKQ--------------------------------------------- 262 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHHHHHHHHHHHH---------------------------------------------
Confidence 999999999986 6788777654200000000000
Q ss_pred CCCCCCCCCchHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHH
Q 000909 638 DSPQPVTYLPPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLI 717 (1230)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1230)
....
T Consensus 263 -----------------------------------------------------------~~~~----------------- 266 (556)
T PRK11819 263 -----------------------------------------------------------EAAR----------------- 266 (556)
T ss_pred -----------------------------------------------------------HHHH-----------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 718 SLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAI 797 (1230)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~ 797 (1230)
+..+ .+. ..|.+ .
T Consensus 267 -----------------------~~~~-~~~----~~~~~--~------------------------------------- 279 (556)
T PRK11819 267 -----------------------QKAL-KRE----LEWVR--Q------------------------------------- 279 (556)
T ss_pred -----------------------HHHH-HHH----HHHHH--H-------------------------------------
Confidence 0000 000 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHH
Q 000909 798 AMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQE 877 (1230)
Q Consensus 798 ~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~ 877 (1230)
... + + . .
T Consensus 280 -----------------------------------------------~~~-------~----~-----------~-~--- 286 (556)
T PRK11819 280 -----------------------------------------------SPK-------A----R-----------Q-A--- 286 (556)
T ss_pred -----------------------------------------------hhh-------h----h-----------H-H---
Confidence 000 0 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 878 EPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAV 957 (1230)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 957 (1230)
.. .......
T Consensus 287 ---~~--------------------------------------------------------------------~~~~~~~ 295 (556)
T PRK11819 287 ---KS--------------------------------------------------------------------KARLARY 295 (556)
T ss_pred ---HH--------------------------------------------------------------------HHHHHHH
Confidence 00 0000000
Q ss_pred HHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHH
Q 000909 958 ASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVI 1037 (1230)
Q Consensus 958 ~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~ 1037 (1230)
++..+ ..++..+.. .. -..+........-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+
T Consensus 296 ~~~~~--~~~~~~~~~-~~--~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl 367 (556)
T PRK11819 296 EELLS--EEYQKRNET-NE--IFIPPGPRLGDKVIEAENLSKSFGD---RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLF 367 (556)
T ss_pred HHhhc--ccccccCCC-ce--eecCCCCCCCCeEEEEEeEEEEECC---eeeecceeEEEcCCCEEEEECCCCCCHHHHH
Confidence 00000 000000000 00 0000000011235999999999963 3599999999999999999999999999999
Q ss_pred HHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccc-cCCc-ccHHHHhccCCC--C--CCHHHHHHHHHHhchHH
Q 000909 1038 GLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEP-VIYA-GNIRDNIVFGKL--D--ASENEVVEAARAANAHE 1111 (1230)
Q Consensus 1038 ~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp-~Lf~-gTIreNl~~g~~--~--~sd~ei~~al~~a~l~~ 1111 (1230)
++|.|+++|++|+|.+++ ++ +++|+||++ .++. .|+++|+.++.. . ..+++..++++..++.+
T Consensus 368 ~~i~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~ 436 (556)
T PRK11819 368 KMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKG 436 (556)
T ss_pred HHHhCCCCCCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCCh
Confidence 999999999999999964 21 599999997 5655 599999986532 1 11223333444443321
Q ss_pred HHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchh
Q 000909 1112 FISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNT 1191 (1230)
Q Consensus 1112 ~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~t 1191 (1230)
.........||||||||++||||++.+|++|||||||++||+.+...+.+.|++. + .|+|+|||+++.
T Consensus 437 ----------~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~ 504 (556)
T PRK11819 437 ----------GDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWF 504 (556)
T ss_pred ----------hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHH
Confidence 0123345679999999999999999999999999999999999999999999986 3 499999999998
Q ss_pred hhh-cCEEEEEeC-cEEEE-ecCHhHHhhc
Q 000909 1192 IKK-LDSIALVAD-GRVVE-RGTYAQLTHM 1218 (1230)
Q Consensus 1192 i~~-~D~I~vl~~-G~Ive-~Gt~~eLl~~ 1218 (1230)
+.. ||+|++|++ |++.+ .|+++++++.
T Consensus 505 ~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 505 LDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 875 799999996 88874 7889888765
No 91
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.6e-65 Score=632.37 Aligned_cols=520 Identities=18% Similarity=0.195 Sum_probs=391.8
Q ss_pred HhcChhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 15 RFADRTDILLMVLGTVGAIGDGMSTNC-LLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGLAVMVVAFLE 93 (1230)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 93 (1230)
+|.+++++. ++++++++++..+.... .+++.+.++|.... .. ..+.. ++++.++..++.++.
T Consensus 6 ~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~--------~~----~~~~~----~~~~~~~~~~~~~~~ 68 (547)
T PRK10522 6 LVWRQYRWP-FISVMALSLASAALGIGLIAFINQRLIETADT--------SL----LVLPE----FLGLLLLLMAVTLGS 68 (547)
T ss_pred HHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------cc----hHHHH----HHHHHHHHHHHHHHH
Confidence 344454443 34455555555444433 24566778885421 00 11111 111222234566788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 000909 94 GYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVFISGLAFSTY 173 (1230)
Q Consensus 94 ~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 173 (1230)
.++..+.+.++..++|.+++++++++|+++|++ .++| ++++|+++|++.+..++. .++.++..++.+++.++++++
T Consensus 69 ~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~-~~~g--~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~ 144 (547)
T PRK10522 69 QLALTTLGHHFVYRLRSEFIKRILDTHVERIEQ-LGSA--SLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAW 144 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc-cCcc--chHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999997 5667 999999999999998765 467788888889999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccH---HHHHHHHHHHHHHHHH
Q 000909 174 FSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAE---RRIIDRYEAILDSTTK 250 (1230)
Q Consensus 174 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e---~~~~~~~~~~~~~~~~ 250 (1230)
++|.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++++ ++.+ +.+.+++++..++..+
T Consensus 145 ~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~ 223 (547)
T PRK10522 145 LSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRH 223 (547)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHh
Confidence 99999999999999988888888899898888999999999999999999999996 4443 4567888888777776
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 251 LGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELKYFTEASIAASRIF 329 (1230)
Q Consensus 251 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~ 329 (1230)
...+..........+. .+......+.+++++.. +..+.+.+..+..+......|+..+...+..++.+..+.+|+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~ 300 (547)
T PRK10522 224 HIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLN 300 (547)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655544443332222 11111222223333222 1122333333333344455788889999999999999999999
Q ss_pred HHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 000909 330 DRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA 409 (1230)
Q Consensus 330 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~ 409 (1230)
++++.+++.+... ... .+..+.|+++||+|+|++ ++++|+|+||+|+|||++||+||||||||||+++|+|+|+|
T Consensus 301 ~l~~~~~~~~~~~--~~~-~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~ 375 (547)
T PRK10522 301 KLALAPYKAEFPR--PQA-FPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQP 375 (547)
T ss_pred HHhcccccccccc--ccc-cCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 9875433211111 111 111357999999999974 24699999999999999999999999999999999999999
Q ss_pred CCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcC
Q 000909 410 DDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGE 489 (1230)
Q Consensus 410 ~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~ 489 (1230)
++|+|.+||+++++++.+++|++|+||+|||++|++|+++| + ++.+++++.++++..++ +.++..++
T Consensus 376 ~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l---------~~~~~~~~ 442 (547)
T PRK10522 376 QSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKM---------AHKLELED 442 (547)
T ss_pred CCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCC---------chhhhccc
Confidence 99999999999999999999999999999999999999999 3 33445555444444433 33333333
Q ss_pred ---CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEE
Q 000909 490 ---RGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVV 564 (1230)
Q Consensus 490 ---~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l 564 (1230)
+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+.+.. +++|+|+||||+++++.||+|++|
T Consensus 443 ~~~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l 522 (547)
T PRK10522 443 GRISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEM 522 (547)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEE
Confidence 378999999999999999999999999999999999999999999987543 489999999999999999999999
Q ss_pred eCCeEEEe-cChhH
Q 000909 565 DNGCLVEI-GTHND 577 (1230)
Q Consensus 565 ~~G~i~~~-g~~~~ 577 (1230)
++|+++|. |++.+
T Consensus 523 ~~G~i~e~~~~~~~ 536 (547)
T PRK10522 523 RNGQLSELTGEERD 536 (547)
T ss_pred ECCEEEEecCCchh
Confidence 99999986 44433
No 92
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=8.9e-67 Score=642.77 Aligned_cols=484 Identities=23% Similarity=0.322 Sum_probs=338.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
-|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +..|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999962 24599999999999999999999999999999999999999999999975 2479
Q ss_pred EEEccCccccch-hHHHHHhcCCCC-----------------CCH---------HHHHHHHHHH-------hHHHHHHhC
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLD-----------------ATM---------DEVIAAATAA-------NAHNFIRQL 479 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~-----------------~~~---------~~~~~~~~~~-------~~~~~i~~l 479 (1230)
|||+|+|.+++. |++||+.++... ... .++.++++.. .+.+.++.+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999998865 999999875310 000 1122222221 123344444
Q ss_pred CCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-c
Q 000909 480 PEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-A 558 (1230)
Q Consensus 480 ~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 558 (1230)
|++. ......+||||||||++|||||+.+|++|||||||++||+.+...+.+.|++. ++|+|+|||+++.+.. |
T Consensus 151 --~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 4432 45677899999999999999999999999999999999999999999999876 3699999999999976 9
Q ss_pred CEEEEEeCCeEE-EecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCC
Q 000909 559 DLIAVVDNGCLV-EIGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVI 637 (1230)
Q Consensus 559 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1230)
|+|++|++|+++ ..|+++++.+........ +...
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~~~~~~~----~~~~----------------------------------------- 260 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQKEKRLEQ----EEKE----------------------------------------- 260 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHHHHHHHH----HHHH-----------------------------------------
Confidence 999999999976 678887765420000000 0000
Q ss_pred CCCCCCCCCchHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHH
Q 000909 638 DSPQPVTYLPPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLI 717 (1230)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1230)
...
T Consensus 261 -----------------------------------------------------------~~~------------------ 263 (552)
T TIGR03719 261 -----------------------------------------------------------ESA------------------ 263 (552)
T ss_pred -----------------------------------------------------------HHH------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 718 SLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAI 797 (1230)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~ 797 (1230)
....+ .|.
T Consensus 264 ----------------------~~~~~-----------------------~~~--------------------------- 271 (552)
T TIGR03719 264 ----------------------RQKAL-----------------------KRE--------------------------- 271 (552)
T ss_pred ----------------------HHHHH-----------------------HHH---------------------------
Confidence 00000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHH
Q 000909 798 AMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQE 877 (1230)
Q Consensus 798 ~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~ 877 (1230)
..|. ... .. .. +... ....
T Consensus 272 -------~~~~------------------~~~--~~-~~---~~~~----------------------~~~~-------- 290 (552)
T TIGR03719 272 -------LEWV------------------RSS--PK-AR---QAKS----------------------KARL-------- 290 (552)
T ss_pred -------HHHH------------------Hhh--hh-hH---HHHH----------------------HHHH--------
Confidence 0000 000 00 00 0000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 878 EPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAV 957 (1230)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 957 (1230)
...
T Consensus 291 -----------------------------------------------------------------------------~~~ 293 (552)
T TIGR03719 291 -----------------------------------------------------------------------------ARY 293 (552)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 000
Q ss_pred HHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHH
Q 000909 958 ASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVI 1037 (1230)
Q Consensus 958 ~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~ 1037 (1230)
++..+ ...+..+..... .. .......+.-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+
T Consensus 294 ~~~~~--~~~~~~~~~~~~--~~-~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl 365 (552)
T TIGR03719 294 EELLS--QEFQKRNETAEI--YI-PPGPRLGDKVIEAENLSKGFGD---KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLF 365 (552)
T ss_pred Hhhhh--hcccccCCCcee--ec-CCCCCCCCeEEEEeeEEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHH
Confidence 00000 000000000000 00 0000001225999999999963 3599999999999999999999999999999
Q ss_pred HHHhccccCCCCeEEECCeecCCCChHHHhhcceEEccccc-CCc-ccHHHHhccCCC--CCC--HHHHHHHHHHhchHH
Q 000909 1038 GLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPV-IYA-GNIRDNIVFGKL--DAS--ENEVVEAARAANAHE 1111 (1230)
Q Consensus 1038 ~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~-Lf~-gTIreNl~~g~~--~~s--d~ei~~al~~a~l~~ 1111 (1230)
++|.|+.+|++|+|.+++ ++ +|+|+||++. ++. .|+++|+.++.. ... +.+..++++..++.+
T Consensus 366 ~~l~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~ 434 (552)
T TIGR03719 366 RMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKG 434 (552)
T ss_pred HHHcCCCCCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCCh
Confidence 999999999999999965 21 6999999973 554 599999987532 111 222333333333311
Q ss_pred HHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchh
Q 000909 1112 FISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNT 1191 (1230)
Q Consensus 1112 ~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~t 1191 (1230)
. ........||||||||++||||++.+|++|||||||++||+.+...+.+.|++. +.|+|+|||+++.
T Consensus 435 ~----------~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~~viivsHd~~~ 502 (552)
T TIGR03719 435 S----------DQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF--AGCAVVISHDRWF 502 (552)
T ss_pred h----------HhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCHHH
Confidence 0 123345679999999999999999999999999999999999999999999986 3499999999999
Q ss_pred hhh-cCEEEEEeC-cEEE-EecCHhHHhhc
Q 000909 1192 IKK-LDSIALVAD-GRVV-ERGTYAQLTHM 1218 (1230)
Q Consensus 1192 i~~-~D~I~vl~~-G~Iv-e~Gt~~eLl~~ 1218 (1230)
+.. ||+|++|++ |+++ ..|+++++++.
T Consensus 503 ~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 503 LDRIATHILAFEGDSHVEWFEGNYSEYEED 532 (552)
T ss_pred HHHhCCEEEEEECCCeEEEeCCCHHHHHHH
Confidence 875 799999997 6887 45888777643
No 93
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-65 Score=635.43 Aligned_cols=484 Identities=21% Similarity=0.325 Sum_probs=332.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +.+|+|+||+|++|+++|||||||||||||+++|+|+++|++|+|.++|.. .++
T Consensus 2 i~i~nls~~~g~---~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~-----------~i~ 67 (638)
T PRK10636 2 IVFSSLQIRRGV---RVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNW-----------QLA 67 (638)
T ss_pred EEEEEEEEEeCC---ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCC-----------EEE
Confidence 789999999963 459999999999999999999999999999999999999999999998842 478
Q ss_pred EEccCccccchhHHHHHhcCCCCC--------------CHHHH---HHH-------HHHHhHHHHHHhCCCccc-chhcC
Q 000909 435 LVSQEHALFGTSIKDNIMFGKLDA--------------TMDEV---IAA-------ATAANAHNFIRQLPEGYE-TKVGE 489 (1230)
Q Consensus 435 ~v~Q~~~l~~~ti~~Ni~~~~~~~--------------~~~~~---~~~-------~~~~~~~~~i~~l~~g~~-t~~~~ 489 (1230)
|++|++..+..|+.+++.-+.... ....+ ... .....+.+.+..+ |+. .....
T Consensus 68 ~~~q~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l--gl~~~~~~~ 145 (638)
T PRK10636 68 WVNQETPALPQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGL--GFSNEQLER 145 (638)
T ss_pred EEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhC--CCCchhhcC
Confidence 888875444445555543210000 00000 000 0012334456666 664 34567
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCe
Q 000909 490 RGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGC 568 (1230)
Q Consensus 490 ~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~ 568 (1230)
...+||||||||++|||||+.+|++|||||||++||+.+..++.+.|.+. +.|+|+|||++..+.. ||+|++|++|+
T Consensus 146 ~~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~--~~tviivsHd~~~l~~~~d~i~~L~~G~ 223 (638)
T PRK10636 146 PVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSY--QGTLILISHDRDFLDPIVDKIIHIEQQS 223 (638)
T ss_pred chhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHhcCEEEEEeCCE
Confidence 77899999999999999999999999999999999999999999999875 5699999999999976 99999999999
Q ss_pred EEE-ecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCc
Q 000909 569 LVE-IGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLP 647 (1230)
Q Consensus 569 i~~-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (1230)
++. .|++++.... ... .. ..+...
T Consensus 224 i~~~~g~~~~~~~~-~~~--~~-~~~~~~--------------------------------------------------- 248 (638)
T PRK10636 224 LFEYTGNYSSFEVQ-RAT--RL-AQQQAM--------------------------------------------------- 248 (638)
T ss_pred EEEecCCHHHHHHH-HHH--HH-HHHHHH---------------------------------------------------
Confidence 974 5665554331 000 00 000000
Q ss_pred hHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 648 PSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHY 727 (1230)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1230)
. ...
T Consensus 249 ---------------------------------------------~----~~~--------------------------- 252 (638)
T PRK10636 249 ---------------------------------------------Y----ESQ--------------------------- 252 (638)
T ss_pred ---------------------------------------------H----HHH---------------------------
Confidence 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 728 NFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAW 807 (1230)
Q Consensus 728 ~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 807 (1230)
T Consensus 253 -------------------------------------------------------------------------------- 252 (638)
T PRK10636 253 -------------------------------------------------------------------------------- 252 (638)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 808 KLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKS 887 (1230)
Q Consensus 808 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 887 (1230)
..+..+ +..+.+++..........
T Consensus 253 ---------------------------~~~~~~------------------------~~~~i~r~~~~a~~~~~a----- 276 (638)
T PRK10636 253 ---------------------------QERVAH------------------------LQSYIDRFRAKATKAKQA----- 276 (638)
T ss_pred ---------------------------HHHHHH------------------------HHHHHHHhhhhhhhHHHH-----
Confidence 000000 000000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000909 888 WLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQ 967 (1230)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~ 967 (1230)
......++++... + +
T Consensus 277 ---------------------------------------------------------------~~r~~~l~~~~~~-~-~ 291 (638)
T PRK10636 277 ---------------------------------------------------------------QSRIKMLERMELI-A-P 291 (638)
T ss_pred ---------------------------------------------------------------HHHHHHHHHhhcc-c-c
Confidence 0000001111100 0 0
Q ss_pred CCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC
Q 000909 968 SLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE 1047 (1230)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~ 1047 (1230)
+..+.. .+-..+.+......-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|+
T Consensus 292 ~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~ 365 (638)
T PRK10636 292 AHVDNP---FHFSFRAPESLPNPLLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPV 365 (638)
T ss_pred cccCCc---eeEecCCCccCCCceEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC
Confidence 000000 000000000001225999999999963 45999999999999999999999999999999999999999
Q ss_pred CCeEEECCeecCCCChHHHhhcceEEcccc--cCCc-ccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccc
Q 000909 1048 QGSVRVDGMDVRELDVHWYRKHTALVSQEP--VIYA-GNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETEC 1124 (1230)
Q Consensus 1048 ~G~I~idG~di~~i~~~~lR~~i~~VpQdp--~Lf~-gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~v 1124 (1230)
+|+|.+++. .+++|+||++ .+.. .|+.+++....+...++++.+.++..++.. ..+
T Consensus 366 ~G~i~~~~~-----------~~igy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~----------~~~ 424 (638)
T PRK10636 366 SGEIGLAKG-----------IKLGYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQG----------DKV 424 (638)
T ss_pred CCeEEECCC-----------EEEEEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCCh----------hHh
Confidence 999999741 2699999985 3443 478888742122223445555555555421 012
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeC
Q 000909 1125 GERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVAD 1203 (1230)
Q Consensus 1125 ge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~ 1203 (1230)
......||||||||++||||++++|++|||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||+|++|++
T Consensus 425 ~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~ 502 (638)
T PRK10636 425 TEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHD 502 (638)
T ss_pred cCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 2334579999999999999999999999999999999999999999999986 4599999999999975 799999999
Q ss_pred cEEE-EecCHhHHhh
Q 000909 1204 GRVV-ERGTYAQLTH 1217 (1230)
Q Consensus 1204 G~Iv-e~Gt~~eLl~ 1217 (1230)
|+++ ..|++++..+
T Consensus 503 G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 503 GKVEPFDGDLEDYQQ 517 (638)
T ss_pred CEEEEcCCCHHHHHH
Confidence 9998 6799988743
No 94
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3.2e-64 Score=664.12 Aligned_cols=214 Identities=22% Similarity=0.417 Sum_probs=178.4
Q ss_pred CcEEEEEEEEECCCC----------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC--CCCeEEECCee
Q 000909 990 GKIEMRRVDFAYPSR----------PDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV--EQGSVRVDGMD 1057 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~----------~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~idG~d 1057 (1230)
..+.|+||++..+.. ....+|+|||++++|||.+||+||||||||||+++|.|..++ .+|+|.+||.+
T Consensus 866 ~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~ 945 (1470)
T PLN03140 866 LAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFP 945 (1470)
T ss_pred ceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCcc
Confidence 369999999998532 123699999999999999999999999999999999999774 68999999988
Q ss_pred cCCCChHHHhhcceEEcccccCCc-ccHHHHhccCC----C-CCCHH----HHHHHHHHhchHHHHHhccccccccccCC
Q 000909 1058 VRELDVHWYRKHTALVSQEPVIYA-GNIRDNIVFGK----L-DASEN----EVVEAARAANAHEFISSLKDGYETECGER 1127 (1230)
Q Consensus 1058 i~~i~~~~lR~~i~~VpQdp~Lf~-gTIreNl~~g~----~-~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~ 1127 (1230)
.+ ...+|+.++||+|++.++. .||+|||.++. | +.+.+ .+.+.++..++.+. .|+.+|..
T Consensus 946 ~~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~ 1015 (1470)
T PLN03140 946 KK---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLP 1015 (1470)
T ss_pred CC---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCC
Confidence 64 3457788999999988776 59999998642 2 22333 24566666666543 46677654
Q ss_pred C-CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchh--hhhcCEEEEEeC
Q 000909 1128 G-VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNT--IKKLDSIALVAD 1203 (1230)
Q Consensus 1128 G-~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t--i~~~D~I~vl~~ 1203 (1230)
+ ..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +|+|||+++|+++. ...+|++++|++
T Consensus 1016 ~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~ 1095 (1470)
T PLN03140 1016 GVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1095 (1470)
T ss_pred CCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcC
Confidence 4 5799999999999999999999999999999999999999999999875 48999999999984 467899999996
Q ss_pred -cEEEEecCHh
Q 000909 1204 -GRVVERGTYA 1213 (1230)
Q Consensus 1204 -G~Ive~Gt~~ 1213 (1230)
|+++..|++.
T Consensus 1096 gG~~v~~G~~~ 1106 (1470)
T PLN03140 1096 GGQVIYSGPLG 1106 (1470)
T ss_pred CCEEEEECCcc
Confidence 8999999864
No 95
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.4e-63 Score=619.86 Aligned_cols=530 Identities=13% Similarity=0.099 Sum_probs=433.3
Q ss_pred hHHHHHHhcChhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccccchhhhhHHHHHHHHHHHHHH
Q 000909 9 NIGIIFRFADRTDI----LLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQSQQNHHENFLDEVEKCSLYFVYLGL 84 (1230)
Q Consensus 9 ~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 84 (1230)
.++++++|++|+++ ..+++.+++.++...+....|++.+.++|.+... +...+...+..+.++++++.+
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~-------~~~~f~~~l~~~~l~~~~~~~ 150 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRR-------SPRNFAWILFKWFLIAPPASF 150 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc-------CHHHHHHHHHHHHHHHHHHHH
Confidence 36667888877654 2455666666666777777888999999986532 111122223334444555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHH
Q 000909 85 AVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIFVMNASVF 164 (1230)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~ 164 (1230)
+..+..++..++......++..++|.+++++....++.+||+ ++| ++.+|+++|++.+.+.+...+..++..++.+
T Consensus 151 ~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g--~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~i 226 (659)
T TIGR00954 151 INSAIKYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQ--NPDQLLTQDVEKFCDSVVELYSNLTKPILDV 226 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCC--CccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666777788888888899999999999999998999999984 456 9999999999999999999999999999999
Q ss_pred HHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHHHHHHHHHH
Q 000909 165 ISGLAFSTY-FSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRIIDRYEA 243 (1230)
Q Consensus 165 i~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~ 243 (1230)
+++++.++. ++|.+++++++.+|+..++..++.+++.+..++.++..++..+...|.++|+++||+|+.|+.+.+++++
T Consensus 227 i~~~~~L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~ 306 (659)
T TIGR00954 227 ILYSFKLLTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMS 306 (659)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHH
Confidence 988887776 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHH--HHHHHHHHHHHHHH-h----cCccHHHHHH-HHHH---HHHHHHHHHHH
Q 000909 244 ILDSTTKLGIKQGTAKGLAVGST-GLSFA--IWAFLAWYGSHLVM-F----KGETGGKIYA-AGIS---FILSGLSLGSA 311 (1230)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~g~~~~~-~----~~~~~g~~~~-~~~~---~~~~~~~l~~~ 311 (1230)
..++..+...+..+..+...++. ++... ..+..++.|...+. . |.+|.|.+++ ++.+ +.....|+..+
T Consensus 307 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l 386 (659)
T TIGR00954 307 SFYRLVEHLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRL 386 (659)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888887766665 33221 22222333332332 2 6788888766 4443 44557789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCC-------CC--CC-------------cccCCccccEEEEEEEEECCCCCC
Q 000909 312 LPELKYFTEASIAASRIFDRIDRVPEIDGE-------DT--KG-------------LVLDEVRGEIEFEHVKFSYPSRPD 369 (1230)
Q Consensus 312 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~-------~~--~~-------------~~~~~~~~~i~~~~v~~~y~~~~~ 369 (1230)
...+..++++.++.+|++++++.+++.+.. .. +. .......+.|+++||+|+|++ +
T Consensus 387 ~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~ 464 (659)
T TIGR00954 387 MLAGRDMTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--G 464 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--C
Confidence 999999999999999999999754322100 00 00 001112356999999999974 2
Q ss_pred CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHH
Q 000909 370 SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKD 449 (1230)
Q Consensus 370 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ 449 (1230)
+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ |++++||+|+|++|++|++|
T Consensus 465 ~~il~~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~e 533 (659)
T TIGR00954 465 DVLIESLSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRD 533 (659)
T ss_pred CeeeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHH
Confidence 3699999999999999999999999999999999999999999999874 56899999999999999999
Q ss_pred HHhcCC-------CCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCC
Q 000909 450 NIMFGK-------LDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATS 522 (1230)
Q Consensus 450 Ni~~~~-------~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts 522 (1230)
||.++. ++.+++++.++++.+++++++++ |.|+||..+ .+.+||||||||++||||++++|+++|||||||
T Consensus 534 ni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts 611 (659)
T TIGR00954 534 QIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTS 611 (659)
T ss_pred HHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 999874 23457788899999999998887 999999876 567999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeC
Q 000909 523 ALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDN 566 (1230)
Q Consensus 523 ~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~ 566 (1230)
+||+++++.+.+.+++. |+|+|+||||++.++.||+|++|+.
T Consensus 612 ~LD~~~~~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 612 AVSVDVEGYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred CCCHHHHHHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999999999999774 8999999999999999999999973
No 96
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=7.6e-64 Score=624.46 Aligned_cols=201 Identities=25% Similarity=0.459 Sum_probs=164.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 4899999999963 35999999999999999999999999999999999999999999999 4332 59
Q ss_pred eEEcccc-cCCc-ccHHHHhccCCCCC--C--HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1071 ALVSQEP-VIYA-GNIRDNIVFGKLDA--S--ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1071 ~~VpQdp-~Lf~-gTIreNl~~g~~~~--s--d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
+|++|++ .++. .|+.+|+.++.+.. . +.++.+.++..++.. +..+ .....||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~----~~~~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------KRAM----TPVKALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------HHHh----ChhhhCCHHHHHHHHHHHH
Confidence 9999986 4655 49999998653221 1 223334444333311 1122 3345799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe-CcEEEEe-cCHhHHhh
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVA-DGRVVER-GTYAQLTH 1217 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~-~G~Ive~-Gt~~eLl~ 1217 (1230)
++.+|++|||||||++||+.+...+.+.+++. ++|+|+|||+++.+.. ||+|++|+ +|+|.++ |++++.++
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999875 5699999999999865 79999998 8999874 78887654
No 97
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3.1e-64 Score=625.26 Aligned_cols=200 Identities=25% Similarity=0.403 Sum_probs=165.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
-|+++||+++|++ ..++|+|+||+|++||++||+||||||||||+++|+|+.+|++|+|.+++ +.++
T Consensus 508 ~L~~~~ls~~y~~--~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPG--GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCC--CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 5999999999963 23599999999999999999999999999999999999999999999976 3479
Q ss_pred eEEcccccCCcccHHHHhc--c--CCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1071 ALVSQEPVIYAGNIRDNIV--F--GKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1071 ~~VpQdp~Lf~gTIreNl~--~--g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
+|+||++. ...++.+|.. + ..+..+++++.++++..++.+.. .......||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~----------~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL----------ALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH----------hcCCccccCHHHHHHHHHHHHHh
Confidence 99999973 2335555532 1 12344567777777777774321 12345689999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEE-EecCHhHHh
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVV-ERGTYAQLT 1216 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv-e~Gt~~eLl 1216 (1230)
++|++|||||||++||+.+...+.+.+.+. +.|+|+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999998875 3599999999999975 7999999999998 578887753
No 98
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.2e-62 Score=609.82 Aligned_cols=535 Identities=16% Similarity=0.160 Sum_probs=438.4
Q ss_pred HHHHHHhhhhhhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHH
Q 000909 649 SFFRLLSLNAPEWK-----QGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNL 723 (1230)
Q Consensus 649 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1230)
.+++++++.+|+|+ .+++.+++.++...+....+++.+.+++.....+..........|.++++++.++..+..+
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566777777776 4556666666667777778888888887766433222222234455556666677777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 724 LQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGL 803 (1230)
Q Consensus 724 ~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~ 803 (1230)
+..++......++..++|++.+++....++.|||+ ++|++.+|+++|++.+...+...+..++..++.++++++.++
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~ 234 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLL 234 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999999999999988899999983 679999999999999999999999999999999988888777
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHH
Q 000909 804 V-VAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQ 882 (1230)
Q Consensus 804 ~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~ 882 (1230)
. ++|.+++++++..|+..++..+..+.+.....+.++..++..+...|.+.|+++|++|+.++.+.+++++..++..+.
T Consensus 235 ~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~ 314 (659)
T TIGR00954 235 TALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEH 314 (659)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 5 999999999999999999999999888888899999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHh-c----CCcCHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHH
Q 000909 883 ARKKSWLAGIGMGSAQCLTFMS-WAL-DFWYGGTLVQ-K----GQISAGDVFKT-FF---ILVSTGKVIAEAGSMTSDLA 951 (1230)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~lv~-~----g~~~~g~~~~~-~~---~~~~~~~~~~~~~~~~~~~~ 951 (1230)
..+...+......+..++.... ..+ .++.|...+. . |.+|.|.++.. .. ++..+..++..+.....++.
T Consensus 315 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~ 394 (659)
T TIGR00954 315 LNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMT 394 (659)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877777777765432 222 2333342332 2 78898876553 32 24556788888999999999
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC----CCCC--CC----C-------CCCcccccCcEEEEEEEEECCCCCCccccccee
Q 000909 952 KGSTAVASVFKILDRQSLIPGSS----QAGD--GT----R-------GSKLQKISGKIEMRRVDFAYPSRPDALVLRQFS 1014 (1230)
Q Consensus 952 ~~~~s~~ri~~~~~~~~~~~~~~----~~~~--~~----~-------~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vs 1014 (1230)
++..+.+|+.++++.+++..... ...+ +. . ........+.|+++||+|+||+ ++++|+|+|
T Consensus 395 ~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~is 472 (659)
T TIGR00954 395 RLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLS 472 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecce
Confidence 99999999999997644321100 0000 00 0 0001113467999999999973 236999999
Q ss_pred EEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCC--
Q 000909 1015 MEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGK-- 1092 (1230)
Q Consensus 1015 l~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~-- 1092 (1230)
|+|++||++||+||||||||||+++|+|+++|++|+|.+|+ |++++||||+|.+|++|++|||.++.
T Consensus 473 l~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~ 541 (659)
T TIGR00954 473 FEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSS 541 (659)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCCh
Confidence 99999999999999999999999999999999999999874 67899999999999999999999874
Q ss_pred -----CCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHH
Q 000909 1093 -----LDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQ 1167 (1230)
Q Consensus 1093 -----~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~ 1167 (1230)
++.++++++++++.+++++++++ |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++
T Consensus 542 ~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~ 619 (659)
T TIGR00954 542 EDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEG 619 (659)
T ss_pred hhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHH
Confidence 34678899999999999999987 999999976 56799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeC
Q 000909 1168 VVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVAD 1203 (1230)
Q Consensus 1168 ~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~ 1203 (1230)
.+++.+++. |+|+|+||||++++..||+|++|+.
T Consensus 620 ~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 620 YMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999999874 8999999999999999999999973
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-63 Score=569.47 Aligned_cols=455 Identities=24% Similarity=0.356 Sum_probs=355.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH-HHHhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL-KWVRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~-~~~r~~ 432 (1230)
-++++|++++|+. .++|+||||++++||++|++|+||||||||+|+|+|.|+|++|+|.+||+...-.++ +.....
T Consensus 8 ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 4889999999974 469999999999999999999999999999999999999999999999999987665 456678
Q ss_pred eEEEccCccccch-hHHHHHhcCCCCCC------HHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLDAT------MDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~------~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
|+.|+||..|++. ||.|||.+|++... +.+..+. +.+.+..+ |.+........+||+||||.|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~-----A~~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRR-----ARELLARL--GLDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHH-----HHHHHHHc--CCCCChhhhhhhCCHHHHHHHHHH
Confidence 9999999999976 99999999976432 2333332 23445555 432225556678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecCh-hHHHhhc
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTH-NDLINRI 582 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~-~~l~~~~ 582 (1230)
||+..+++|+|||||||+|+....+.+++.++++. +|.++|+||||++++.. ||||.||.||+.+..++. .++-..
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~~- 236 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSED- 236 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCHH-
Confidence 99999999999999999999998899999998875 79999999999999976 999999999999875431 111000
Q ss_pred CcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhhhH
Q 000909 583 DGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPEWK 662 (1230)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (1230)
T Consensus 237 -------------------------------------------------------------------------------- 236 (500)
T COG1129 237 -------------------------------------------------------------------------------- 236 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 663 QGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRL 742 (1230)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (1230)
.++...
T Consensus 237 ------------------------~lv~~M-------------------------------------------------- 242 (500)
T COG1129 237 ------------------------ELVRLM-------------------------------------------------- 242 (500)
T ss_pred ------------------------HHHHHh--------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 743 RMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTIL 822 (1230)
Q Consensus 743 ~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~ 822 (1230)
.|+
T Consensus 243 --------------------vGr--------------------------------------------------------- 245 (500)
T COG1129 243 --------------------VGR--------------------------------------------------------- 245 (500)
T ss_pred --------------------hCc---------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 823 CFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTF 902 (1230)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (1230)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCC
Q 000909 903 MSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRG 982 (1230)
Q Consensus 903 ~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~ 982 (1230)
++-+..+. +.. .
T Consensus 246 -----------------------------------------------------------~~~~~~~~-~~~-----~--- 257 (500)
T COG1129 246 -----------------------------------------------------------ELEDLFPE-PPE-----E--- 257 (500)
T ss_pred -----------------------------------------------------------chhhhccc-ccc-----c---
Confidence 00000000 000 0
Q ss_pred CCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC
Q 000909 983 SKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD 1062 (1230)
Q Consensus 983 ~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~ 1062 (1230)
......++++|++..- .++|+||++++||.+||.|-=|||+|-++.+|+|..++.+|+|.+||.++.--+
T Consensus 258 ---~~~~~~l~v~~l~~~~-------~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~s 327 (500)
T COG1129 258 ---GIGEPVLEVRNLSGGG-------KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRS 327 (500)
T ss_pred ---CCCCcEEEEecCCCCC-------ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCC
Confidence 0001136777776531 589999999999999999999999999999999999999999999999887766
Q ss_pred h-HHHhhcceEEcccc----cCCcccHHHHhccCCC-CCCHH-HHHHHHHHhchHHHHHhccccccccccCCCCCCChhH
Q 000909 1063 V-HWYRKHTALVSQEP----VIYAGNIRDNIVFGKL-DASEN-EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQ 1135 (1230)
Q Consensus 1063 ~-~~lR~~i~~VpQdp----~Lf~gTIreNl~~g~~-~~sd~-ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1135 (1230)
+ +..+..|+|||-|- .+...+|++|+.+... ..+.. -+..+.++....+++.+|.-.-.. ....-.+||||.
T Consensus 328 p~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s-~~~~v~~LSGGN 406 (500)
T COG1129 328 PRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPS-PEQPIGTLSGGN 406 (500)
T ss_pred HHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCC-ccchhhcCCchh
Confidence 5 57888999999775 3556799999987621 11111 244555666667777776322111 113345799999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEe
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVER 1209 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~ 1209 (1230)
+|+++|||+|..+|+||||||||.++|..+.+.|.+.|+++. +|++||+||-.+..+. .||||+||.+|+|+..
T Consensus 407 QQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e 482 (500)
T COG1129 407 QQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGE 482 (500)
T ss_pred hhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999975 5899999999999986 7899999999999974
No 100
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.6e-63 Score=609.20 Aligned_cols=436 Identities=23% Similarity=0.307 Sum_probs=321.5
Q ss_pred EEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEE-----------ECCeecCCCCHH
Q 000909 359 HVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVR-----------IDGVDIRRLQLK 427 (1230)
Q Consensus 359 ~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~-----------~~g~~i~~~~~~ 427 (1230)
+++++|+. +..+|++++ .+++||++||+||||||||||+++|+|+++|++|+|. ++|.++.++..+
T Consensus 78 ~~~~~yg~--~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~ 154 (590)
T PRK13409 78 EPVHRYGV--NGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKK 154 (590)
T ss_pred CceEEecC--CceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHH
Confidence 48899963 235899999 9999999999999999999999999999999999997 899988654321
Q ss_pred H--HhhheE----EEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHH
Q 000909 428 W--VRREMG----LVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 428 ~--~r~~i~----~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
. .+.+++ |++|.|.+|.+|++||+.... ..+ .+.+.++.+ |++........+||||||||
T Consensus 155 ~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~~---~~~---------~~~~~l~~l--~l~~~~~~~~~~LSgGe~qr 220 (590)
T PRK13409 155 LYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKVD---ERG---------KLDEVVERL--GLENILDRDISELSGGELQR 220 (590)
T ss_pred HhccCcceeecccchhhhhhhhcchHHHHHHhhh---HHH---------HHHHHHHHc--CCchhhcCChhhCCHHHHHH
Confidence 1 112344 555567778889999997421 011 223445555 66666777888999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++++|++||||||||+||+.+...+.+.|+++.+|+|+|+|||+++.+.. ||+|++|++|. |.+
T Consensus 221 v~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~----g~~----- 291 (590)
T PRK13409 221 VAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP----GAY----- 291 (590)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc----ccc-----
Confidence 99999999999999999999999999999999999987558999999999999976 99999997631 100
Q ss_pred hcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhh
Q 000909 581 RIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPE 660 (1230)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1230)
+.+.. . . . .
T Consensus 292 ---g~~~~---------------~--~-----------------~------------------------~---------- 300 (590)
T PRK13409 292 ---GVVSK---------------P--K-----------------G------------------------V---------- 300 (590)
T ss_pred ---ceecc---------------h--h-----------------H------------------------H----------
Confidence 00000 0 0 0 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 661 WKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRI 740 (1230)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (1230)
......|. ..
T Consensus 301 ----------------------------------------~~~i~~~~----------------~~-------------- 310 (590)
T PRK13409 301 ----------------------------------------RVGINEYL----------------KG-------------- 310 (590)
T ss_pred ----------------------------------------HHhHHHHH----------------Hh--------------
Confidence 00000000 00
Q ss_pred HHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 741 RLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLT 820 (1230)
Q Consensus 741 ~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~ 820 (1230)
|.
T Consensus 311 ---------------~~--------------------------------------------------------------- 312 (590)
T PRK13409 311 ---------------YL--------------------------------------------------------------- 312 (590)
T ss_pred ---------------cc---------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 821 ILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCL 900 (1230)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (1230)
. . |. +
T Consensus 313 -----------~---~--------------e~------~----------------------------------------- 317 (590)
T PRK13409 313 -----------P---E--------------EN------M----------------------------------------- 317 (590)
T ss_pred -----------h---h--------------hh------h-----------------------------------------
Confidence 0 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCC
Q 000909 901 TFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGT 980 (1230)
Q Consensus 901 ~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~ 980 (1230)
|+ .+.+...+..+. ...
T Consensus 318 ----------------------------------------------------------~~---~~~~~~~~~~~~--~~~ 334 (590)
T PRK13409 318 ----------------------------------------------------------RI---RPEPIEFEERPP--RDE 334 (590)
T ss_pred ----------------------------------------------------------hc---cccCcceecCCC--ccc
Confidence 00 000000000000 000
Q ss_pred CCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC
Q 000909 981 RGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE 1060 (1230)
Q Consensus 981 ~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1060 (1230)
. ....-++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ +
T Consensus 335 --~---~~~~~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~---~-- 400 (590)
T PRK13409 335 --S---ERETLVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE---L-- 400 (590)
T ss_pred --c---CCceEEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe---e--
Confidence 0 00124899999999953 25999999999999999999999999999999999999999999986 1
Q ss_pred CChHHHhhcceEEcccccC-CcccHHHHhccCCCCCC-HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1061 LDVHWYRKHTALVSQEPVI-YAGNIRDNIVFGKLDAS-ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1061 i~~~~lR~~i~~VpQdp~L-f~gTIreNl~~g~~~~s-d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
+++|+||++.+ ++.|+++|+.++..... +..+.++++..++.+.. ......||||||||
T Consensus 401 --------~i~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~-----------~~~~~~LSGGe~QR 461 (590)
T PRK13409 401 --------KISYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLL-----------DKNVKDLSGGELQR 461 (590)
T ss_pred --------eEEEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHH-----------hCCcccCCHHHHHH
Confidence 59999999875 56799999986532222 33445666666665432 23345799999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecC
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1211 (1230)
++|||||+++|+||||||||++||+++...+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 462 vaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 462 VAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred HHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 9999999999999999999999999999999999998743 7899999999999875 799999964 8877665
No 101
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.9e-61 Score=573.16 Aligned_cols=490 Identities=25% Similarity=0.348 Sum_probs=346.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|+ ++++|+|+||++.+|+++||||+||||||||+|+|+|...|++|+|..++. -++
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 488999999996 346999999999999999999999999999999999999999999998762 269
Q ss_pred EEEccCccccch-hHHHHHhcCCCCCC--HHHHHHHHH-------------------------HHhHHHHHHhCCCcccc
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLDAT--MDEVIAAAT-------------------------AANAHNFIRQLPEGYET 485 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~~~--~~~~~~~~~-------------------------~~~~~~~i~~l~~g~~t 485 (1230)
+|++|++.+.+. ||.+.+.-+..... ..+...+.. .+.+...+..+ |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999865 99999987643210 001111100 12233334444 4444
Q ss_pred hhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEE
Q 000909 486 KVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVV 564 (1230)
Q Consensus 486 ~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l 564 (1230)
. .....+||||||-|++|||||+.+|++|||||||++||.++..++.+.|.+.. | |+|+||||.+++.. |++|+.+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~-g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYP-G-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCC-C-cEEEEeCCHHHHHHHhhheEEe
Confidence 4 55667899999999999999999999999999999999999999999998654 5 99999999999988 9999999
Q ss_pred eCCeEEE-ecChhHHHhhcCcHHHHHHHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCC
Q 000909 565 DNGCLVE-IGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPV 643 (1230)
Q Consensus 565 ~~G~i~~-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (1230)
++|++.. .|+++..++. .......+.
T Consensus 224 d~g~l~~y~Gny~~~~~~-----------r~~~~~~~~------------------------------------------ 250 (530)
T COG0488 224 DRGKLTPYKGNYSSYLEQ-----------KAERLRQEA------------------------------------------ 250 (530)
T ss_pred cCCceeEecCCHHHHHHH-----------HHHHHHHHH------------------------------------------
Confidence 9998754 3444444332 110000000
Q ss_pred CCCchHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHH
Q 000909 644 TYLPPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNL 723 (1230)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1230)
....+.
T Consensus 251 -----------~~~~~~--------------------------------------------------------------- 256 (530)
T COG0488 251 -----------AAYEKQ--------------------------------------------------------------- 256 (530)
T ss_pred -----------HHHHHH---------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 724 LQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGL 803 (1230)
Q Consensus 724 ~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~ 803 (1230)
.+..+
T Consensus 257 ------------------~~~~~--------------------------------------------------------- 261 (530)
T COG0488 257 ------------------QKELA--------------------------------------------------------- 261 (530)
T ss_pred ------------------HHHHH---------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHH
Q 000909 804 VVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQA 883 (1230)
Q Consensus 804 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~ 883 (1230)
.+..+.+++........++
T Consensus 262 ------------------------------------------------------------~~~~~i~r~~~~~~~~k~a- 280 (530)
T COG0488 262 ------------------------------------------------------------KEQEWIRRGKAAASKAKKA- 280 (530)
T ss_pred ------------------------------------------------------------HHHHHHHHHHhccchHHHH-
Confidence 0000000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 884 RKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKI 963 (1230)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~ 963 (1230)
......++++.+-
T Consensus 281 -------------------------------------------------------------------~sr~k~l~k~~~~ 293 (530)
T COG0488 281 -------------------------------------------------------------------KSRIKRLEKLEAR 293 (530)
T ss_pred -------------------------------------------------------------------HHHHHHHHHHHhh
Confidence 0000111111110
Q ss_pred -HccCCCCCCCCCCCCCCCCCCc-ccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHh
Q 000909 964 -LDRQSLIPGSSQAGDGTRGSKL-QKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQ 1041 (1230)
Q Consensus 964 -~~~~~~~~~~~~~~~~~~~~~~-~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1041 (1230)
....+.....+.. -...++. ...+--++++|++++|++. +++++++||.|.+|++||||||||+|||||+++|.
T Consensus 294 ~~~~~~~~~~~~~~--~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~ 369 (530)
T COG0488 294 LAEERPVEEGKPLA--FRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLA 369 (530)
T ss_pred hhhcccccccccce--eeccCCcccCCCeeEEEeccccccCCC--ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHh
Confidence 0000000000000 0000000 0112358999999999643 56999999999999999999999999999999999
Q ss_pred ccccCCCCeEEECCeecCCCChHHHhhcceEEcccc-cCC-cccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhcccc
Q 000909 1042 RFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEP-VIY-AGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDG 1119 (1230)
Q Consensus 1042 rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp-~Lf-~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~g 1119 (1230)
|-..|.+|+|.+.-. -++||.+|+. .++ +.|+-|++.-..|+..+.++...|...+...--
T Consensus 370 g~~~~~~G~v~~g~~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~------ 432 (530)
T COG0488 370 GELGPLSGTVKVGET-----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGED------ 432 (530)
T ss_pred hhcccCCceEEeCCc-----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHH------
Confidence 999999999999731 2589999998 444 348999997555555577788887777664321
Q ss_pred ccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEE
Q 000909 1120 YETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSI 1198 (1230)
Q Consensus 1120 ldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I 1198 (1230)
..++ ...||||||-|+.||+.++.+|++|||||||.+||.+|...+.++|.++ ..|||+|||+.+.+.. |++|
T Consensus 433 ~~~~----v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i 506 (530)
T COG0488 433 QEKP----VGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRI 506 (530)
T ss_pred HhCc----hhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceE
Confidence 2233 3469999999999999999999999999999999999999999999886 6699999999999986 5999
Q ss_pred EEEeCcEEEEe-cCHhHHhhccc
Q 000909 1199 ALVADGRVVER-GTYAQLTHMRG 1220 (1230)
Q Consensus 1199 ~vl~~G~Ive~-Gt~~eLl~~~g 1220 (1230)
+++++ ++.++ |++++..+..+
T Consensus 507 ~~~~~-~~~~~~g~y~~y~~~~~ 528 (530)
T COG0488 507 WLVED-KVEEFEGGYEDYLEQKK 528 (530)
T ss_pred EEEcC-ceeEcCCCHHHHHHhhc
Confidence 99999 88887 89998877643
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.9e-60 Score=533.22 Aligned_cols=461 Identities=25% Similarity=0.412 Sum_probs=361.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCC-HHHHhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQ-LKWVRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~-~~~~r~~ 432 (1230)
.++++++++.|| ...+++||||++++||+.||+|+||+|||||+++|.|+|+|++|+|++||++++--+ .+..|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999998 346899999999999999999999999999999999999999999999999998554 5678889
Q ss_pred eEEEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
||+|.|++.|++. |+.|||.+|.+......+........+.+..+++ |++-...+....||-||||||.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999976 9999999997642111111122223344555555 777777888889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHHHHH
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHYAKM 589 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 589 (1230)
|++||||||||-|-|...+.+++.++.+. .|+|||+|||++.++.. |||+-||.+|+++..-++ . +
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~-~--------- 226 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--V-A--------- 226 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--C-C---------
Confidence 99999999999999999999999998864 69999999999999987 999999999998753211 0 0
Q ss_pred HHHhhcccCCCCCCCcccccccccccCCCCccccCCCCcccCCCCCCCCCCCCCCCCchHHHHHHhhhhhhhHHHHHHHH
Q 000909 590 AKLQRQFSCDDQETIPETHVSSVTRSSGGRLSAARSSPAIFASPLPVIDSPQPVTYLPPSFFRLLSLNAPEWKQGLIGSL 669 (1230)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (1230)
+... . ...++
T Consensus 227 ------------~~t~-~-----------------------------------------ela~l---------------- 236 (501)
T COG3845 227 ------------ETTE-E-----------------------------------------ELAEL---------------- 236 (501)
T ss_pred ------------CCCH-H-----------------------------------------HHHHH----------------
Confidence 0000 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 670 SAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKIL 749 (1230)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l 749 (1230)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 750 TFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKV 829 (1230)
Q Consensus 750 ~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~ 829 (1230)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 830 LLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDF 909 (1230)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1230)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcccc
Q 000909 910 WYGGTLVQKG-QISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKI 988 (1230)
Q Consensus 910 ~~g~~lv~~g-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1230)
+-| .+. . ..+. .+..+-
T Consensus 237 -------MvG~~v~-------------------------------------------~--~~~~----------~~~~pg 254 (501)
T COG3845 237 -------MVGREVV-------------------------------------------L--RVVK----------PPSTPG 254 (501)
T ss_pred -------hcCCccc-------------------------------------------c--cccc----------CCCCCC
Confidence 000 000 0 0000 000011
Q ss_pred cCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeec-CCCChHHHh
Q 000909 989 SGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDV-RELDVHWYR 1067 (1230)
Q Consensus 989 ~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di-~~i~~~~lR 1067 (1230)
.--++++|++..=+ + +.+.+++|||+|++||.+||.|-.|-|-+.|+.+|.|+..|.+|+|.++|.|+ ...+....|
T Consensus 255 ~~vL~V~~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r 332 (501)
T COG3845 255 EVVLEVEDLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERR 332 (501)
T ss_pred CeEEEEeeeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHH
Confidence 22489999998643 2 34589999999999999999999999999999999999999999999999997 677887766
Q ss_pred h-cceEEccccc----CCcccHHHHhccCCCC---------CCHHHHHHHHHHhchHHHHHhc---cccccccccCCCCC
Q 000909 1068 K-HTALVSQEPV----IYAGNIRDNIVFGKLD---------ASENEVVEAARAANAHEFISSL---KDGYETECGERGVQ 1130 (1230)
Q Consensus 1068 ~-~i~~VpQdp~----Lf~gTIreNl~~g~~~---------~sd~ei~~al~~a~l~~~i~~l---p~gldt~vge~G~~ 1130 (1230)
+ .++|||.|.+ ....|+.||+.++..+ .+..++.+.+ .+.++++ +.+-+++ -.+
T Consensus 333 ~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a-----~~li~~fdVr~~~~~~~----a~~ 403 (501)
T COG3845 333 RLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFA-----RELIEEFDVRAPSPDAP----ARS 403 (501)
T ss_pred hcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHH-----HHHHHHcCccCCCCCcc----hhh
Confidence 5 6999999984 5677999999765422 1122333222 2334333 1233333 357
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEE
Q 000909 1131 LSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVE 1208 (1230)
Q Consensus 1131 LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive 1208 (1230)
||||+.||+-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++||-+|+.+. -||||.||.+|+|+.
T Consensus 404 LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~ 483 (501)
T COG3845 404 LSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVG 483 (501)
T ss_pred cCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceec
Confidence 99999999999999999999999999999999999999999988875 5899999999999985 579999999999998
Q ss_pred ecCHhH
Q 000909 1209 RGTYAQ 1214 (1230)
Q Consensus 1209 ~Gt~~e 1214 (1230)
..++++
T Consensus 484 ~~~~~~ 489 (501)
T COG3845 484 IVPPEE 489 (501)
T ss_pred cccccc
Confidence 877765
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.4e-54 Score=477.82 Aligned_cols=236 Identities=24% Similarity=0.448 Sum_probs=222.8
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhc
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKH 1069 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1069 (1230)
|+|+|+||+++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ ++|+|++||+|+.+++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 579999999999642 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred ceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000909 1070 TALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNP 1149 (1230)
Q Consensus 1070 i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p 1149 (1230)
++||||+|.+|++|+++|+++.. ..++++++++++.+++.+++.++|+++|+.++++|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999997432 35788999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHhhh
Q 000909 1150 TILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATL 1228 (1230)
Q Consensus 1150 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~ 1228 (1230)
+||||||||++||+++++.+++.|++.++++|+|+||||++++..||||+||++|++++.|+|++|+++++.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 9999999999999999999999999888899999999999999999999999999999999999999988888888764
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-52 Score=419.45 Aligned_cols=220 Identities=32% Similarity=0.527 Sum_probs=194.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC-CCHHHHhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR-LQLKWVRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~-~~~~~~r~~ 432 (1230)
-|+++|++++|++ ..||+|||++|++||+++|+||||||||||+++|.|+-+|++|+|.+||.++.. .+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 3899999999973 459999999999999999999999999999999999999999999999988743 378889999
Q ss_pred eEEEccCccccch-hHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
+|+|+|+..||+. |+.||+.++.- ..+.++.. ..+.+.++++ |+.......+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~-----~~A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAR-----EKALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHH-----HHHHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 9999999999976 99999998742 12223222 2233556666 888888889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcC
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRID 583 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 583 (1230)
+.+|+++++|||||||||+...++.+.++++. .|.|.|+|||.+.+++. ||||++||+|+|+++|+++++..++.
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999864 68999999999999988 99999999999999999999988644
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8e-51 Score=409.42 Aligned_cols=215 Identities=29% Similarity=0.488 Sum_probs=191.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecC-CCChHHHhhc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVR-ELDVHWYRKH 1069 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~lR~~ 1069 (1230)
-|+++||+.+|. +..||+|||++|++||+++|+||||||||||+++|.+|-+|++|+|.+||.++. +.++..+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 389999999996 346999999999999999999999999999999999999999999999998773 3378999999
Q ss_pred ceEEcccccCCc-ccHHHHhccCCC---CCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1070 TALVSQEPVIYA-GNIRDNIVFGKL---DASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1070 i~~VpQdp~Lf~-gTIreNl~~g~~---~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
+|+|+|...||. -|+-||+.++.- ..+.+ .-.+.|+++|+.|..+..| .+||||||||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 999999999997 499999987621 22322 3345677788877766554 5799999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhc-CEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKKL-DSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~-D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
||||..+|+++++||||||||||.-..+.+.++++. .|.|.|+|||.+...+++ |||+.||+|+|+|+|+|+++..++
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999999986 488999999999999875 999999999999999999999874
No 106
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-49 Score=454.83 Aligned_cols=228 Identities=27% Similarity=0.441 Sum_probs=201.7
Q ss_pred cccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecC
Q 000909 985 LQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVR 1059 (1230)
Q Consensus 985 ~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~ 1059 (1230)
.|+..+.|+|+||+++|++. .+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+|++
T Consensus 74 ~~~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~ 152 (329)
T PRK14257 74 DFNHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTR 152 (329)
T ss_pred CCCcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 36667889999999999642 3469999999999999999999999999999999999997 57999999999997
Q ss_pred --CCChHHHhhcceEEcccccCCcccHHHHhccCCC--CCCHHHH-----HHHHHHhchHHHHHhccccccccccCCCCC
Q 000909 1060 --ELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DASENEV-----VEAARAANAHEFISSLKDGYETECGERGVQ 1130 (1230)
Q Consensus 1060 --~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~sd~ei-----~~al~~a~l~~~i~~lp~gldt~vge~G~~ 1130 (1230)
++++..+|++++||||+|.+|++|+++||.|+.. ..++++. .++++.+++ ++++++.++++|.+
T Consensus 153 ~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~ 225 (329)
T PRK14257 153 SKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNA 225 (329)
T ss_pred ccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCccc
Confidence 4566789999999999999999999999997632 2445544 344555554 34566788999999
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEe
Q 000909 1131 LSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVER 1209 (1230)
Q Consensus 1131 LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~ 1209 (1230)
||||||||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.. ||||+||++|+|+|.
T Consensus 226 LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~ 305 (329)
T PRK14257 226 LSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEA 305 (329)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999999889999999999999988 899999999999999
Q ss_pred cCHhHHhhccc
Q 000909 1210 GTYAQLTHMRG 1220 (1230)
Q Consensus 1210 Gt~~eLl~~~g 1220 (1230)
|+|+++.....
T Consensus 306 g~~~~l~~~~~ 316 (329)
T PRK14257 306 GETKTIFIHPK 316 (329)
T ss_pred CCHHHHhcCCC
Confidence 99999987643
No 107
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-49 Score=408.37 Aligned_cols=224 Identities=32% Similarity=0.529 Sum_probs=195.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+|+|||++|. ++.+++|+||+|++||+++++|||||||||++|+|.|+++|++|+|++||+++++++...+|++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999997 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCccccch-hHHHHHhcCCCCC--CHHHHHHHHHHHhHHHHHHhCCCcccc--hhcCCCCCCChhHHHHHHHHHHhc
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKLDA--TMDEVIAAATAANAHNFIRQLPEGYET--KVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t--~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
||-|..-||+. ||.|||++-..-. +.+++. ..+.+.+..+ |++- ...+.+.+|||||+|||.+||||+
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~-----~r~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RALA 151 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIK-----KRADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARALA 151 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHH-----HHHHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHHh
Confidence 99999999975 9999999753212 222222 2233444444 6653 567888999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHH
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHY 586 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 586 (1230)
.+|+|+++|||++||||.+++.+++.+.++. -++|+|+|||++++.-+ ||||.+|++|+++..++|++++.++...|
T Consensus 152 adP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~F 231 (309)
T COG1125 152 ADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDF 231 (309)
T ss_pred cCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHH
Confidence 9999999999999999999999999998764 48999999999999755 99999999999999999999998765555
Q ss_pred HH
Q 000909 587 AK 588 (1230)
Q Consensus 587 ~~ 588 (1230)
-+
T Consensus 232 V~ 233 (309)
T COG1125 232 VE 233 (309)
T ss_pred HH
Confidence 43
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-49 Score=420.54 Aligned_cols=223 Identities=34% Similarity=0.525 Sum_probs=193.6
Q ss_pred EEEEEEEEECCCC--CCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH---HHH
Q 000909 355 IEFEHVKFSYPSR--PDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL---KWV 429 (1230)
Q Consensus 355 i~~~~v~~~y~~~--~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~---~~~ 429 (1230)
|+++|||+.|+.. +...+|+||||+|++||+.||||+||+|||||++++.++-.|++|+|.+||+|+..++. ...
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999852 12468999999999999999999999999999999999999999999999999988764 456
Q ss_pred hhheEEEccCccccc-hhHHHHHhcCCCCCC--HHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 430 RREMGLVSQEHALFG-TSIKDNIMFGKLDAT--MDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 430 r~~i~~v~Q~~~l~~-~ti~~Ni~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
|++||++||++.|++ .||.+|++|+..-+. .+++ ..+. .+.++-. |+....+..+.+|||||||||+|||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei--~~RV---~elLelV--gL~dk~~~yP~qLSGGQKQRVaIAR 154 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEI--KQRV---AELLELV--GLSDKADRYPAQLSGGQKQRVAIAR 154 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHH--HHHH---HHHHHHc--CChhhhccCchhcCcchhhHHHHHH
Confidence 789999999999997 699999999754322 2222 1222 2333333 8888888899999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcC
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRID 583 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 583 (1230)
||+.+|+||+.|||||||||+|.+.|.+.|++.. .|-|+++|||.++.++. |||+.||++|+++|+|+..++..++.
T Consensus 155 ALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk 234 (339)
T COG1135 155 ALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPK 234 (339)
T ss_pred HHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcc
Confidence 9999999999999999999999999999998753 48999999999999988 99999999999999999999987654
Q ss_pred c
Q 000909 584 G 584 (1230)
Q Consensus 584 ~ 584 (1230)
.
T Consensus 235 ~ 235 (339)
T COG1135 235 H 235 (339)
T ss_pred h
Confidence 3
No 109
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-48 Score=438.58 Aligned_cols=197 Identities=24% Similarity=0.380 Sum_probs=161.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
-|.|+||+|+|++.+ ..+++++|-|.++++||+|||||+|||||++++.+...|+.|.+.-.-.. ++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cc
Confidence 499999999997543 69999999999999999999999999999999999999999998765322 22
Q ss_pred eEEcc---cccCCcccHHHHhccCCC-CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1071 ALVSQ---EPVIYAGNIRDNIVFGKL-DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1071 ~~VpQ---dp~Lf~gTIreNl~~g~~-~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
++..| |...++-|.-|++..--+ .-+.+++...+.+.|+...... .++ .+||+|||.|++.||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~------~p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQV------VPM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccc------cch----hhcccccchhHHHHHHHh
Confidence 33333 334567788888753223 3456778888888888643332 233 479999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhc-CEEEEEeCcEEEEe-cCH
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKL-DSIALVADGRVVER-GTY 1212 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~-D~I~vl~~G~Ive~-Gt~ 1212 (1230)
++|.||||||||++||.+|-..+.++|+++ ..+||+|||+...|... ++|++.+||.+... |+.
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i 591 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDI 591 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccH
Confidence 999999999999999999999999999986 66899999999999875 99999999998754 444
No 110
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.8e-48 Score=433.48 Aligned_cols=236 Identities=24% Similarity=0.436 Sum_probs=218.5
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
|.|+++|++++|++. ..++|+|+||+|++||+++|+|+||||||||+++|.|+++ ++|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 469999999999742 3469999999999999999999999999999999999998 79999999999999999999999
Q ss_pred eEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 433 MGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 433 i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
|+||||+|.+|++|+++|+.... ..++++++++++..++.+++.++|+|+++.++++|.+||||||||++||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999997432 24567899999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHHHH
Q 000909 513 VILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKL 592 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 592 (1230)
+|+||||||++||+.+++.+++.|++..+++|+|+||||++++..||+|++|++|++++.|+++++++. .+.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhh
Confidence 999999999999999999999999987778999999999999989999999999999999999999984 5777776653
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-49 Score=395.96 Aligned_cols=218 Identities=30% Similarity=0.487 Sum_probs=198.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCC-----CeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ-----GSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~-----G~I~idG~di~~--i~~ 1063 (1230)
.++++|+++.|. +..+|+|||++|++++.+|++|||||||||++++|.|+.|... |+|.+||.||-+ ++.
T Consensus 7 ~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 589999999996 3459999999999999999999999999999999999999876 999999999976 578
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--C----CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--D----ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~----~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
-.||+++|+|+|.|.-|..||+||++||.. + .-||-++++|+.|.+||-+.. .| .+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---rL----~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---RL----HKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---Hh----hCCccCCChhHHH
Confidence 999999999999999999999999999832 1 224557889999999998753 33 4567789999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
||||||||.-+|+|||||||||||||-+-..|.+.|.++.++-|+++|||.+.-..+ +|+..++-.|+++|+|.-+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999999999999999998765 5999999999999999999988
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
.+
T Consensus 237 ~~ 238 (253)
T COG1117 237 TN 238 (253)
T ss_pred cC
Confidence 76
No 112
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-49 Score=416.07 Aligned_cols=217 Identities=34% Similarity=0.513 Sum_probs=189.6
Q ss_pred EEEEEEEEECCCC--CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC---hHHH
Q 000909 992 IEMRRVDFAYPSR--PDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD---VHWY 1066 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~--~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~l 1066 (1230)
|+|+||++.|+.. ...++|+||||+|++||+.||+|+||+|||||++++.||-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999752 1245999999999999999999999999999999999999999999999999988776 5566
Q ss_pred hhcceEEcccccCCc-ccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1067 RKHTALVSQEPVIYA-GNIRDNIVFGKL--DASENE----VVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1067 R~~i~~VpQdp~Lf~-gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
|++||+|+|++.|++ .||.+|++|+-. ..+.++ +.+.|+.+|+.|+-. .-+.+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~-----------~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKAD-----------RYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhc-----------cCchhcCcchhhHH
Confidence 789999999999998 799999998642 233443 455666666666544 34568999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
+|||||..+|+||+.|||||||||+|-+.|.+.|++.- -|-|+++|||-++.+++ |||+.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998763 38899999999999986 7999999999999999999988
Q ss_pred hcc
Q 000909 1217 HMR 1219 (1230)
Q Consensus 1217 ~~~ 1219 (1230)
.++
T Consensus 231 ~~P 233 (339)
T COG1135 231 ANP 233 (339)
T ss_pred cCc
Confidence 763
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-49 Score=393.41 Aligned_cols=221 Identities=32% Similarity=0.453 Sum_probs=198.6
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC-----ceEEECCeecCC--CC
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADD-----GIVRIDGVDIRR--LQ 425 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-----G~i~~~g~~i~~--~~ 425 (1230)
..++++|+++.|+ ++.+|+|||++|++++++|++|||||||||+++++.|+.+... |+|.++|+||.+ ++
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 3689999999997 3459999999999999999999999999999999999999875 999999999976 57
Q ss_pred HHHHhhheEEEccCccccchhHHHHHhcCCCC------CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHH
Q 000909 426 LKWVRREMGLVSQEHALFGTSIKDNIMFGKLD------ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQK 499 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 499 (1230)
...+|++||+|+|.|.-|+.||+||++||..- .-++.++++++.+.+++-++. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 88999999999999999999999999998431 112346778888888876643 36677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||+||||||.-+|+|||||||||||||.+..+|.+.|.++.++-|+|+|||.+....+ +|+..++..|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999999999999999999866 999999999999999999999
Q ss_pred HhhcC
Q 000909 579 INRID 583 (1230)
Q Consensus 579 ~~~~~ 583 (1230)
..++.
T Consensus 236 F~~P~ 240 (253)
T COG1117 236 FTNPK 240 (253)
T ss_pred hcCcc
Confidence 87543
No 114
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.5e-47 Score=419.54 Aligned_cols=237 Identities=48% Similarity=0.770 Sum_probs=220.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|+.. ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999642 346999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000909 1072 LVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTI 1151 (1230)
Q Consensus 1072 ~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~I 1151 (1230)
|+||++.+|+.|++||+.++.+..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999986555566677888888999999999999999998889999999999999999999999999
Q ss_pred EEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHhhhc
Q 000909 1152 LLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1152 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++++.+.|..+++++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~~ 237 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLYQLQ 237 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHHhcC
Confidence 999999999999999999999999877899999999999998899999999999999999999999889998887653
No 115
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.1e-46 Score=417.32 Aligned_cols=242 Identities=30% Similarity=0.521 Sum_probs=223.6
Q ss_pred cccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH
Q 000909 987 KISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY 1066 (1230)
Q Consensus 987 ~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l 1066 (1230)
...|.|+++|++++|+.. ..++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 356889999999999742 2469999999999999999999999999999999999999999999999999999998899
Q ss_pred hhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1067 RKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1067 R~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
|++++|+||+|.+|++|+++|+.+.. ...+++++++++.+++.+++..+|.|+++.+++.+.+||||||||++||||++
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999997543 23466788899999999999999999999999999999999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhc-ccccHHH
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHM-RGAFFNL 1225 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~-~g~y~~l 1225 (1230)
++|++|||||||++||+++...+.+.+++..+++|+|++||+++.+..||+|++|++|++++.|+++++++. ++.|+++
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 252 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASL 252 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHH
Confidence 999999999999999999999999999987778999999999999999999999999999999999999986 5778888
Q ss_pred hhhcC
Q 000909 1226 ATLQS 1230 (1230)
Q Consensus 1226 ~~~q~ 1230 (1230)
+..|+
T Consensus 253 ~~~~~ 257 (257)
T cd03288 253 VRTDK 257 (257)
T ss_pred HhccC
Confidence 87664
No 116
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-44 Score=383.03 Aligned_cols=471 Identities=20% Similarity=0.229 Sum_probs=350.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChhHHHHHHHHhHHHHHHHHhhhHHHH
Q 000909 78 YFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIF 157 (1230)
Q Consensus 78 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g~l~~r~~~D~~~i~~~~~~~~~~~ 157 (1230)
+++++.++..+.+.+........+++...++|.++.++++..|+.-+++ -+++ .++.++++|+..|. +-...++.+
T Consensus 53 ~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier-~~~~--rlla~L~~Dvr~IS-f~~s~lp~~ 128 (546)
T COG4615 53 EFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER-LGSA--RLLAGLTSDVRNIS-FAFSRLPEL 128 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-hccc--chhhhhccccccee-ehHhhhHHH
Confidence 3444444445566677777788999999999999999999999999996 4455 99999999999998 545567889
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhccHH--
Q 000909 158 VMNASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAER-- 235 (1230)
Q Consensus 158 ~~~~~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~-- 235 (1230)
.++.+..+++++.+.++++++.++.++++.+.++...+...+..+......+..+++.+..+..++|.|+.+...--.
T Consensus 129 ~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~ 208 (546)
T COG4615 129 VQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEY 208 (546)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHH
Confidence 999999999999999999999888888888888888888888888888889999999999999999999999875322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 236 RIIDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPE 314 (1230)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 314 (1230)
...+.|...-+..++..............+. .+.+....+++|.... .+..+.....++......+..|+.++...
T Consensus 209 ~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~---~~w~st~~a~tivlvlLflr~pL~s~vgi 285 (546)
T COG4615 209 VHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALS---LGWASTNVAATIVLVLLFLRTPLLSAVGI 285 (546)
T ss_pred HHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hccchhhHHHHHHHHHHHHhhHHHHHHhh
Confidence 2223332222222221111111111111111 1222223333333221 12223333334444455566789999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccCCccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCC
Q 000909 315 LKYFTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGS 394 (1230)
Q Consensus 315 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGs 394 (1230)
++.+..+.++.++|.++-..++..+- .. ....++ -..||++||.|+|+.. ..-+..||++|++||++-|+|.|||
T Consensus 286 lP~l~~AqvA~~kiakle~~~~~a~~-~~-~q~~p~-~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGs 360 (546)
T COG4615 286 LPTLLTAQVAFNKIAKLELAPYKADF-PR-PQAFPD-WKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGS 360 (546)
T ss_pred hhHHHHHHHHHHHHHHhhcCCccccC-CC-CCcCCc-ccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCC
Confidence 99999999999999886543322111 11 111122 3479999999999743 2468899999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHHHHhcCCCC-CCHHHHHHHHHHHhHH
Q 000909 395 GKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLD-ATMDEVIAAATAANAH 473 (1230)
Q Consensus 395 GKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~-~~~~~~~~~~~~~~~~ 473 (1230)
||||++++|.|+|+|++|+|++||.+++.-+++++|+-++-|+-|.|||+.++ |.+. ++.+.+...++.-.+.
T Consensus 361 GKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~ 434 (546)
T COG4615 361 GKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELA 434 (546)
T ss_pred cHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998765 3333 5555555444433332
Q ss_pred HHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCCeEEEEecC
Q 000909 474 NFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQA--SLGRTTLVVAHK 551 (1230)
Q Consensus 474 ~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~--~~~~t~i~itH~ 551 (1230)
... ++.+|--+ ...||-|||.|+|+--|++-+.||++|||=-+--||.=++.+.+.+... ..|||++.||||
T Consensus 435 ~kt-sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHD 508 (546)
T COG4615 435 HKT-SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHD 508 (546)
T ss_pred hhh-cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecC
Confidence 211 22222111 1469999999999999999999999999999999999988887776543 359999999999
Q ss_pred chhhhccCEEEEEeCCeEEEe
Q 000909 552 LSTVRNADLIAVVDNGCLVEI 572 (1230)
Q Consensus 552 l~~~~~~d~i~~l~~G~i~~~ 572 (1230)
-.+...|||++.|++|+++|.
T Consensus 509 d~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 509 DHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred chhhhhHHHHHHHhcCceeec
Confidence 999999999999999999985
No 117
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-47 Score=390.07 Aligned_cols=214 Identities=28% Similarity=0.456 Sum_probs=189.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+.+|++|+|+|||.||++++..+||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccccCCc-ccHHHHhccCC--CCCCH----HHHHHHHHHhchH--HHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1072 LVSQEPVIYA-GNIRDNIVFGK--LDASE----NEVVEAARAANAH--EFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1072 ~VpQdp~Lf~-gTIreNl~~g~--~~~sd----~ei~~al~~a~l~--~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
||-|..-||. -||.|||++-. ..-+. +++.+-++.+++. +|..+. +..|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----------P~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRY-----------PHELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----------chhcCcchhhHHHHH
Confidence 9999999996 59999998521 12233 3455566666664 354444 457999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhh-hhcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTI-KKLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti-~~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
|||..+|+||++|||.+||||-|...+|+-+.+..+ ++|+|+|||+++.. +-+|||.||++|+|+.+|+|+++++++
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999987653 89999999999875 567999999999999999999999873
No 118
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-46 Score=425.86 Aligned_cols=228 Identities=28% Similarity=0.435 Sum_probs=195.2
Q ss_pred ccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--
Q 000909 351 VRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR-- 423 (1230)
Q Consensus 351 ~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~-- 423 (1230)
..+.|+++|++++|++. .+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++..
T Consensus 77 ~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34679999999999642 3469999999999999999999999999999999999997 579999999999974
Q ss_pred CCHHHHhhheEEEccCccccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHH
Q 000909 424 LQLKWVRREMGLVSQEHALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 424 ~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
.+...+|+.++||||+|++|++|++|||.|+.. ..++++.++......++. ..+++++++.++++|.+||||||||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~--~~L~~~l~~~~~~~~~~LSgGqkqR 233 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKS--AALWDEVKDDLDKAGNALSGGQQQR 233 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHH--cCCcchhhhhhhCCcccCCHHHHHH
Confidence 455678999999999999999999999998642 122333322211111111 1245567788999999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++++|+|||||||||+||+++.+.+.+.|+++.+++|+|+|||+++++.. ||+|++|++|++++.|+++++..
T Consensus 234 l~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~ 313 (329)
T PRK14257 234 LCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFI 313 (329)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999988788999999999999987 99999999999999999999986
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
.
T Consensus 314 ~ 314 (329)
T PRK14257 314 H 314 (329)
T ss_pred C
Confidence 4
No 119
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-45 Score=406.08 Aligned_cols=236 Identities=48% Similarity=0.777 Sum_probs=219.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|++ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++++.+...+|+.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 235999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000909 1072 LVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTI 1151 (1230)
Q Consensus 1072 ~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~I 1151 (1230)
|+||+|.+|++|+++|+.++.+..+++++.++++.+++.+.+..+|.|+++.+.....+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655667778888999999999999999999999988999999999999999999999999
Q ss_pred EEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHhhhc
Q 000909 1152 LLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1152 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q 1229 (1230)
|||||||++||+++...+.+.|.+..++.|+|++||+++.+..||++++|++|++++.|+++++.++.+.|..++..|
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEMWKAQ 236 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHHHhcC
Confidence 999999999999999999999998766889999999999999999999999999999999999998888888777653
No 120
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-45 Score=405.52 Aligned_cols=233 Identities=52% Similarity=0.858 Sum_probs=216.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|+++ +.++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999643 236999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000909 1072 LVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTI 1151 (1230)
Q Consensus 1072 ~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~I 1151 (1230)
|+||+|.+|+.|++||+.++....+.+++.+.++..++.++++.+|.|+++.++.....||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655566677788888899999999999999999988999999999999999999999999
Q ss_pred EEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHH
Q 000909 1152 LLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNL 1225 (1230)
Q Consensus 1152 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l 1225 (1230)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+..+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcchhhh
Confidence 99999999999999999999999987889999999999999999999999999999999999999887777654
No 121
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.4e-45 Score=405.21 Aligned_cols=237 Identities=58% Similarity=0.960 Sum_probs=217.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|+...+.++|+|+||++++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997433346999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000909 1072 LVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTI 1151 (1230)
Q Consensus 1072 ~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~I 1151 (1230)
|+||+|.+|+.|++||+.++.+....+++.+.++..++.+++..+|.|+++..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987555556677788888899999999999999999988999999999999999999999999
Q ss_pred EEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHhhh
Q 000909 1152 LLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATL 1228 (1230)
Q Consensus 1152 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~ 1228 (1230)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+..+.++.++..
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~ 237 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAKLVKA 237 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHHHhhc
Confidence 99999999999999999999999876789999999999999989999999999999999999998877777766654
No 122
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.4e-45 Score=403.72 Aligned_cols=234 Identities=50% Similarity=0.832 Sum_probs=213.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999642 346999999999999999999999999999999999999999999999999998888778889999
Q ss_pred EEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCE
Q 000909 435 LVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVI 514 (1230)
Q Consensus 435 ~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 514 (1230)
|++|++++|+.|++||+.++.+....+++.+.++..++.++++.+|.|+++..+..+.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999987544445566667777788899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHH
Q 000909 515 LLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMA 590 (1230)
Q Consensus 515 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 590 (1230)
+||||||++||+.+...+.+.|++..+|+|+|++||+++.+..||++++|++|++++.|+++++.+. .+.|..++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHH
Confidence 9999999999999999999999987778999999999999988999999999999999999999875 67777654
No 123
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-45 Score=378.48 Aligned_cols=223 Identities=32% Similarity=0.506 Sum_probs=191.4
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH---HH
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK---WV 429 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~---~~ 429 (1230)
..|++++|+++|++ +.+++|+||+|++||+++|+||||||||||+++|.|+..|++|+|.++|+|+.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 46999999999963 5699999999999999999999999999999999999999999999999999988754 57
Q ss_pred hhheEEEccCccccch-hHHHHHhcCCCC---CCHHHHHHHHHHHhHHHHHHhCCCcccch-hcCCCCCCChhHHHHHHH
Q 000909 430 RREMGLVSQEHALFGT-SIKDNIMFGKLD---ATMDEVIAAATAANAHNFIRQLPEGYETK-VGERGALLSGGQKQRIAI 504 (1230)
Q Consensus 430 r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~-~~~~g~~LSgGqkqri~i 504 (1230)
|+++|+++|...||+. ||+||+.|...+ .+.+.+.+.+ .. .++.. |+... ....+++||||++.|+||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv-~~----KL~~V--GL~~~~~~~~PsELSGGM~KRvaL 156 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELV-LM----KLELV--GLRGAAADLYPSELSGGMRKRVAL 156 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHH-HH----HHHhc--CCChhhhhhCchhhcchHHHHHHH
Confidence 8999999999999976 999999986432 2233332222 11 13333 66665 455678999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 505 ARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 505 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|||+..||+|+++|||||+|||.+...+.+.|+++. -|.|+++|||+++++.. ||+|+++.+|+|+..|+++|+.+.
T Consensus 157 ARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 157 ARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred HHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999998765 38999999999999977 999999999999999999999985
Q ss_pred cCcHH
Q 000909 582 IDGHY 586 (1230)
Q Consensus 582 ~~~~~ 586 (1230)
+..|
T Consensus 237 -d~P~ 240 (263)
T COG1127 237 -DDPW 240 (263)
T ss_pred -CCHH
Confidence 4433
No 124
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-45 Score=402.24 Aligned_cols=229 Identities=45% Similarity=0.821 Sum_probs=213.5
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhc
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKH 1069 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1069 (1230)
|+|+++|++++|+. ..++++|+||++++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 46999999999963 2359999999999999999999999999999999999999999999999999998888889999
Q ss_pred ceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000909 1070 TALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNP 1149 (1230)
Q Consensus 1070 i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p 1149 (1230)
++|+||+|.+|++|++||+.++.+....+++.++++..++.++++.+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555667788889999999999999999999999889999999999999999999999
Q ss_pred CEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhccc
Q 000909 1150 TILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRG 1220 (1230)
Q Consensus 1150 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g 1220 (1230)
++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|++++++++.|
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~~~ 229 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAKKG 229 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhhCC
Confidence 99999999999999999999999998877899999999999999999999999999999999999887643
No 125
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.7e-46 Score=396.43 Aligned_cols=223 Identities=29% Similarity=0.456 Sum_probs=188.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.++++|++|+|++ +++|+|+||+|++||+++|+||||||||||+|+|+|+.+|.+|+|++||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 4789999999973 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCcc-ccchhHHHHHhcCCCCC-CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 434 GLVSQEHA-LFGTSIKDNIMFGKLDA-TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 434 ~~v~Q~~~-l~~~ti~~Ni~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|||||++. -|.-||+|-+.+|+... +.-..+...+...+.+.++.+ |+.....+.-.+||||||||+.|||||+++
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~--~~~~la~r~~~~LSGGerQrv~iArALaQ~ 156 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELL--GLEHLADRPVDELSGGERQRVLIARALAQE 156 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHh--CcHHHhcCcccccChhHHHHHHHHHHHhcC
Confidence 99999975 45669999999996421 100000001111112223333 555556667788999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhh-hccCEEEEEeCCeEEEecChhHHHhh
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTV-RNADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|+||+||||||+||...+.++++.++++. +|+|+|+|.|++... +.||++++|++|+++.+|+++|.+..
T Consensus 157 ~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 157 TPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred CCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 99999999999999999999999999865 589999999999886 56999999999999999999998863
No 126
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4e-45 Score=398.93 Aligned_cols=221 Identities=35% Similarity=0.615 Sum_probs=207.3
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhc
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKH 1069 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1069 (1230)
|.|+++|++++|+.. +.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 469999999999743 2469999999999999999999999999999999999999999999999999999898899999
Q ss_pred ceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000909 1070 TALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNP 1149 (1230)
Q Consensus 1070 i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p 1149 (1230)
++|+||+|.+|++|++||+.+.. ..+.+++.++++..++.+++.++|.|+++.+++.+.+||||||||++||||++++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFG-EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCC-CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998654 35677889999999999999999999999999999999999999999999999999
Q ss_pred CEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCH
Q 000909 1150 TILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTY 1212 (1230)
Q Consensus 1150 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~ 1212 (1230)
++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 999999999999999999999999988778999999999999999999999999999998863
No 127
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=377.08 Aligned_cols=222 Identities=34% Similarity=0.553 Sum_probs=192.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCC---HHHHh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQ---LKWVR 430 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~---~~~~r 430 (1230)
.|+++||+..||+ ++.+|+||||+|++||++|||||||||||||+++|.|+.+|++|+|.++|.++...+ ...+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 5899999999984 457999999999999999999999999999999999999999999999999998876 56778
Q ss_pred hheEEEccCccccch-hHHHHHhcCCCCCC--HHHH---HHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHH
Q 000909 431 REMGLVSQEHALFGT-SIKDNIMFGKLDAT--MDEV---IAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAI 504 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~i 504 (1230)
++|||++|++.|.+. |+.+|+..|..... ...+ ....++..+.+.++++ |+......+..+|||||+|||+|
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLerv--gi~~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERV--GILDKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHc--CcHHHHHHHhccCCcchhHHHHH
Confidence 899999999999876 99999998864321 1100 1112233344556666 77777778889999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHH
Q 000909 505 ARAIIKNPVILLLDEATSALDSESETLVQNALDQA--SLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLI 579 (1230)
Q Consensus 505 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~--~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 579 (1230)
||||+++|+|+|-|||+|+|||.+.+.+++.|++. ..|.|+|+.-|.++.+++ ||||+-|++|+|+..|+.+|+-
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 99999999999999999999999999999999875 468999999999999876 9999999999999999999964
No 128
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-45 Score=407.64 Aligned_cols=221 Identities=34% Similarity=0.537 Sum_probs=190.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++||+++|++. .+++|+||+|++||+++|+|||||||||++++|+|+.+|++|+|.|||.+++++++++ ++|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999742 1899999999999999999999999999999999999999999999999999999875 789
Q ss_pred EEEccCccccch-hHHHHHhcCCCCC--CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLDA--TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
|+|||+..||+. ||+|||+||.... ..+++.+..+ +..+.| +++..+..++.+|||||||||||||||++
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~-----eva~~L--~l~~lL~r~P~~LSGGQrQRVAlaRAlVr 150 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVK-----EVAKLL--GLEHLLNRKPLQLSGGQRQRVALARALVR 150 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHH-----HHHHHc--CChhHHhcCcccCChhhHHHHHHHHHHhc
Confidence 999999999976 9999999986532 2333322111 112233 66667777788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHH
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHY 586 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 586 (1230)
+|++++||||+|+||++.+..+...|+++. .+.|+|+||||..++.. ||||.||++|+|.+.|++.|+.+++...+
T Consensus 151 ~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~f 229 (338)
T COG3839 151 KPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANLF 229 (338)
T ss_pred CCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccchh
Confidence 999999999999999999999988888754 37899999999999876 99999999999999999999998655443
No 129
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.1e-45 Score=382.75 Aligned_cols=210 Identities=35% Similarity=0.518 Sum_probs=175.7
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH---H-
Q 000909 355 IEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW---V- 429 (1230)
Q Consensus 355 i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~---~- 429 (1230)
++++||++.|.... ...+|+++||+|++||++||+||||||||||+++|.|+..|++|.|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 246999999999999999999999999999999999999999999999999999887533 3
Q ss_pred hhheEEEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhc-CCCCCCChhHHHHHHHH
Q 000909 430 RREMGLVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVG-ERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 430 r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~-~~g~~LSgGqkqri~iA 505 (1230)
|++||||+|+..|++. |++|||.++.. .....+. .....+.++.+ |+..... ..+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~-----~~~~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRR-----KRAAEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHH-----HHHHHHHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 5679999999999976 99999995321 1111111 11122334444 7765554 77889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCCeEEE
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNGCLVE 571 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 571 (1230)
|||+.+|+|++.||||++||+++.+.+.+.+.+.. .|+|+|+|||+......|||++.|+||++.+
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999873 4899999999999999999999999999543
No 130
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.9e-44 Score=402.55 Aligned_cols=195 Identities=24% Similarity=0.325 Sum_probs=161.7
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhc
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKH 1069 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1069 (1230)
..+++.+|+|.|+..+. +.++++++.+..-+++++||++|+||||+++++.+-..|..|.+-+.+ |.+
T Consensus 361 p~l~i~~V~f~y~p~~y-~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEY-QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CeeEEEeeeccCCCcch-hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 35999999999974422 699999999999999999999999999999999999999999998876 788
Q ss_pred ceEEcccccCC-cccHHH--HhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1070 TALVSQEPVIY-AGNIRD--NIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1070 i~~VpQdp~Lf-~gTIre--Nl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
|+|-.|..+=| +-.+.. -+.-..|+.+++|+++.|...|+..-+..- .-..||||||=|+++|-+..
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~----------si~~LSGGQKsrvafA~~~~ 498 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQ----------SIASLSGGQKSRVAFAACTW 498 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhc----------cccccCCcchhHHHHHHHhc
Confidence 99999977543 212111 111113556899999998888775544321 12469999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEE
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVE 1208 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive 1208 (1230)
.+|.+|||||||..||.++-..+-++|+.. +.-||+|||+.+.+.. |+.++|.++|+|..
T Consensus 499 ~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 499 NNPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred CCCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 999999999999999999999999999875 4479999999999985 69999999999975
No 131
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.8e-44 Score=400.25 Aligned_cols=240 Identities=34% Similarity=0.518 Sum_probs=217.0
Q ss_pred CccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH
Q 000909 350 EVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV 429 (1230)
Q Consensus 350 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~ 429 (1230)
...+.|+++|++++|++. ++.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 346789999999999742 2469999999999999999999999999999999999999999999999999998888888
Q ss_pred hhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 430 RREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 430 r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
++.|+|++|++++|++|++||+..... ...+++.++.+..++.+.+..+|.|+++.+++.+.+||||||||++||||++
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999976432 2345566777777888999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHH
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKM 589 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 589 (1230)
++|+++||||||++||+++++.+.+.+++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+..++.|+++
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 252 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASL 252 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHH
Confidence 99999999999999999999999999988777899999999999998899999999999999999999987545667766
Q ss_pred HH
Q 000909 590 AK 591 (1230)
Q Consensus 590 ~~ 591 (1230)
+.
T Consensus 253 ~~ 254 (257)
T cd03288 253 VR 254 (257)
T ss_pred Hh
Confidence 54
No 132
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-45 Score=409.38 Aligned_cols=223 Identities=32% Similarity=0.524 Sum_probs=190.9
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
..|+++||+++|+ +..+++|+||+|++||+++++|||||||||++++|+||.+|++|+|.+||+++.+++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3699999999997 35699999999999999999999999999999999999999999999999999999886 578
Q ss_pred eEEEccCccccch-hHHHHHhcCCCC---CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLD---ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
||+|+|+..||+. ||+|||+||... ...+++.+ .+.+.++.+ |++..-.+++.+|||||+|||||||||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~-----rv~e~L~lV--~L~~~~~R~p~qLSGGQqQRVALARAL 151 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKA-----RVEEALELV--GLEGFADRKPHQLSGGQQQRVALARAL 151 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHH-----HHHHHHHHc--CchhhhhhChhhhChHHHHHHHHHHHh
Confidence 9999999999975 999999999651 12222211 112223333 555566777889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-ccCEEEEEeCCeEEEecChhHHHhhcCcH
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVR-NADLIAVVDNGCLVEIGTHNDLINRIDGH 585 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 585 (1230)
..+|++||||||.||||.+-+..++..++++. .|.|.|+|||+-++.. .+|||.||++|+|...|+++|+...+...
T Consensus 152 ~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~~ 231 (352)
T COG3842 152 VPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPATR 231 (352)
T ss_pred hcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcchH
Confidence 99999999999999999999999998888753 4899999999999875 59999999999999999999999865544
Q ss_pred HH
Q 000909 586 YA 587 (1230)
Q Consensus 586 ~~ 587 (1230)
|-
T Consensus 232 fV 233 (352)
T COG3842 232 FV 233 (352)
T ss_pred HH
Confidence 43
No 133
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-44 Score=410.97 Aligned_cols=220 Identities=21% Similarity=0.428 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCC-------
Q 000909 991 KIEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVREL------- 1061 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i------- 1061 (1230)
.|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ---------ChHHHhhcceEEcccc--cCCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhcccccc-ccccCC
Q 000909 1062 ---------DVHWYRKHTALVSQEP--VIYAGNIRDNIVFGKL--DASENEVVEAARAANAHEFISSLKDGYE-TECGER 1127 (1230)
Q Consensus 1062 ---------~~~~lR~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~gld-t~vge~ 1127 (1230)
+...+|++++||+|+| .+|++|++||+.++.. +.+.++..+ .+ .++++.+ |++ ...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---~~--~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---LA--KFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---HH--HHHHHHc--CCChhHhcCC
Confidence 3567899999999998 6999999999988632 234433322 11 2334443 443 345677
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhh-hhcCEEEEEeCcE
Q 000909 1128 GVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTI-KKLDSIALVADGR 1205 (1230)
Q Consensus 1128 G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti-~~~D~I~vl~~G~ 1205 (1230)
+.+||||||||++|||||+++|+|||||||||+||+.+++.+.+.|++.. +++|+|+|||+++.+ ..||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 88999999999999999999999999999999999999999999998764 589999999999987 4689999999999
Q ss_pred EEEecCHhHHhh
Q 000909 1206 VVERGTYAQLTH 1217 (1230)
Q Consensus 1206 Ive~Gt~~eLl~ 1217 (1230)
+++.|+|+++.+
T Consensus 254 i~~~g~~~~~~~ 265 (320)
T PRK13631 254 ILKTGTPYEIFT 265 (320)
T ss_pred EEEeCCHHHHhc
Confidence 999999997643
No 134
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3.6e-41 Score=395.26 Aligned_cols=480 Identities=16% Similarity=0.156 Sum_probs=358.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccc---CChhHHHHHHhhhHHHHHHHHH
Q 000909 706 TYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQ---NSSGALCSRLSNEASMVKSLVA 782 (1230)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~---~~~G~l~~r~s~D~~~i~~~~~ 782 (1230)
....+|.+++.+...+...+.|+......++-.-+-+.+..+-+...-.|+.... +..-..=+|+.+|+...-....
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~ 166 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTL 166 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHH
Confidence 3356677777777888888888888888888888888888888877744443211 1112345799999988877666
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000909 783 DRVSLLVQTTSAVAIAMIMGL---------------VVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQ 847 (1230)
Q Consensus 783 ~~l~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (1230)
.....++.++.+++...+++. .++..+.++++..+++..+..++..+.+.+..-+..+.++....
T Consensus 167 ~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~ 246 (604)
T COG4178 167 DLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY 246 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH
Confidence 666666777666665555544 22333344444445555555555556666666666667777777
Q ss_pred HHHHHHhchHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHH
Q 000909 848 IAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVF 927 (1230)
Q Consensus 848 ~~~e~l~g~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~ 927 (1230)
...-.-++.+.|..|+.|+...++.++..+.......+..........+.....++...+-+..++-....|.++.|.++
T Consensus 247 ~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lm 326 (604)
T COG4178 247 SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLM 326 (604)
T ss_pred HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHH
Confidence 77777788899999999988877766666655554444433333334444444444445555566667889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCC
Q 000909 928 KTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQS--LIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRP 1005 (1230)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~ 1005 (1230)
.+..++......++.+....+.+..-.....|+.++.+.-. +.+.+.....+..-.........|+|+|++..-|+.
T Consensus 327 qa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~- 405 (604)
T COG4178 327 QAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC-
Confidence 99999999999999999999999999999999988874322 111110000000000001014679999999999853
Q ss_pred CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHH
Q 000909 1006 DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIR 1085 (1230)
Q Consensus 1006 ~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIr 1085 (1230)
.+.|+++||.|+|||.+-|.|+||||||||+++|.|+++--+|+|..-. -..+-++||.|++-.||+|
T Consensus 406 -~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLr 473 (604)
T COG4178 406 -QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLR 473 (604)
T ss_pred -CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHH
Confidence 3689999999999999999999999999999999999999999987751 1346899999999999999
Q ss_pred HHhccCCCC--CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCH
Q 000909 1086 DNIVFGKLD--ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDV 1163 (1230)
Q Consensus 1086 eNl~~g~~~--~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~ 1163 (1230)
|-|.|+++. .+|+++.++|.+|++.++++++.+ .+. -..-||+|||||||+||.++++|++++|||||||||+
T Consensus 474 e~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~~~----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe 548 (604)
T COG4178 474 EALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-EDR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDE 548 (604)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-cCc----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccCh
Confidence 999998754 899999999999999999998743 222 3457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeC
Q 000909 1164 QSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVAD 1203 (1230)
Q Consensus 1164 ~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~ 1203 (1230)
++|..+.+.+++...++|+|.|+||.....-.++.+-+++
T Consensus 549 ~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 549 ETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 9999999999999999999999999888777777666543
No 135
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.3e-45 Score=358.28 Aligned_cols=207 Identities=30% Similarity=0.468 Sum_probs=179.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH---HHHhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL---KWVRR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~---~~~r~ 431 (1230)
|+|+||++.|++. +++|+||||+|++||++-++||||||||||+|+|.+...|+.|+|.++|.|+..+.. .-+|+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999864 569999999999999999999999999999999999999999999999999988754 46899
Q ss_pred heEEEccCccccch-hHHHHHhcCCCC--CCH----HHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHH
Q 000909 432 EMGLVSQEHALFGT-SIKDNIMFGKLD--ATM----DEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAI 504 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~~-ti~~Ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~i 504 (1230)
+||+|+||..|... ||+||++|...- .+. +++.++++.+++.+-. ..-+.+|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~-----------~~lP~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKA-----------RALPSQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhh-----------hcCccccCchHHHHHHH
Confidence 99999999998755 999999986431 122 2344555555444444 44457899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecC
Q 000909 505 ARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGT 574 (1230)
Q Consensus 505 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 574 (1230)
|||++.+|++||-||||.+|||++...|++.+.+.. .|.||++.||+.+.+.. --|++.+++|+++....
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999998864 59999999999999977 57999999999987644
No 136
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.5e-45 Score=354.05 Aligned_cols=209 Identities=35% Similarity=0.549 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|.+++|.|+|...+ -.++++|++||++||+||||||||||+++|+||..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56789999996432 357899999999999999999999999999999999999999999999887765 46799
Q ss_pred EEccCccccch-hHHHHHhcCCCC------CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKLD------ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
+++||..||.. ||++||.+|... ...+++..++...++..+.+++| .+||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHH
Confidence 99999999975 999999999531 12356778888888888888887 4799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQA--SLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~--~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|+++-+|++||||+|+|||.-+.++...+.++ .++.|+++|||.++.+.. +|+++++++|+|.++|+.+++...
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 99999999999999999999999998888775 358899999999999876 999999999999999999998764
No 137
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.3e-45 Score=388.07 Aligned_cols=214 Identities=31% Similarity=0.487 Sum_probs=192.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.++++||+|+|+ ++++|+|+||+|++||.++|+||||||||||+++|.|+..|.+|+|++||.|+.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999996 34699999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEcccc-cCCcccHHHHhccCCCC-------CC--H-HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1071 ALVSQEP-VIYAGNIRDNIVFGKLD-------AS--E-NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1071 ~~VpQdp-~Lf~gTIreNl~~g~~~-------~s--d-~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
+||||++ .-|.-||+|=+.+|+-. .+ | +.+.+|++..++.++..+ .-..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-----------~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-----------PVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-----------cccccChhHHHHH
Confidence 9999996 45677999999988521 12 3 357789999999988653 2346999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCcEEEEecCHhHHh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTI-KKLDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
.|||||.++|+||+||||||+||...+-.|.+.+++.. +|+|+|+|.|+++.. +.||++++|++|+|+..|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999875 479999999999875 567999999999999999999887
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 54
No 138
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-45 Score=379.10 Aligned_cols=199 Identities=34% Similarity=0.454 Sum_probs=172.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.+++++|+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999974 4699999999999999999999999999999999999999999999999988443 3479
Q ss_pred EEEccCccccc-hhHHHHHhcCCCCCC--HHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFG-TSIKDNIMFGKLDAT--MDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~-~ti~~Ni~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
+||+|++.||+ -||+||+.+|..... .++- .+.+.+.++.. |+...-+..+.+||||||||+||||||+.
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~-----~~~a~~~L~~V--gL~~~~~~~P~qLSGGMrQRVaiARAL~~ 147 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEA-----RERAKELLELV--GLAGFEDKYPHQLSGGMRQRVAIARALAT 147 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhH-----HHHHHHHHHHc--CCcchhhcCccccChHHHHHHHHHHHHhc
Confidence 99999999997 599999999865321 2211 11334555555 77777788889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCC
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNG 567 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G 567 (1230)
+|+||+||||++|||+.|+..+++.+.++. .++|+++|||++++.-. +|||++|.++
T Consensus 148 ~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 148 RPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred CCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999998753 47999999999999765 9999999984
No 139
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-44 Score=388.99 Aligned_cols=216 Identities=33% Similarity=0.568 Sum_probs=196.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecC-CCChHHHhhc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVR-ELDVHWYRKH 1069 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~lR~~ 1069 (1230)
.|+++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|++.|++|.|.+||.+++ +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999865 57999999999999999999999999999999999999999999999999998 4889999999
Q ss_pred ceEEcccc--cCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1070 TALVSQEP--VIYAGNIRDNIVFGKL--DASENE----VVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1070 i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
+|+|+|+| ++|..||.+.++||.. ..+.++ +.++++.+++.++.+ ....+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~-----------r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLD-----------RPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhcc-----------CCccccCCcceeeHHh
Confidence 99999999 8999999999999854 344444 667788888877633 3456899999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
|.+|..+|++||||||||+||+...+.+.+.++++.+ ++|+|+|||+++.+.. |||++||++|+++.+|+|+++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 4799999999999988 899999999999999999999876
Q ss_pred c
Q 000909 1219 R 1219 (1230)
Q Consensus 1219 ~ 1219 (1230)
.
T Consensus 230 ~ 230 (235)
T COG1122 230 A 230 (235)
T ss_pred h
Confidence 4
No 140
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.2e-44 Score=413.57 Aligned_cols=216 Identities=31% Similarity=0.467 Sum_probs=189.0
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH---Hh
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW---YR 1067 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 1067 (1230)
|+++||+++|+... ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+.+++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996321 246999999999999999999999999999999999999999999999999999887654 57
Q ss_pred hcceEEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1068 KHTALVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
++|+||||++.+|. .|++||+.++.. ..+ ++++.++++.+++.++.++ .+..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~-----------~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDS-----------YPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 89999999999995 799999987521 222 2345677777777665443 34579999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhh
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
|||||+.+|+|||||||||+||+++...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998753 7999999999999965 89999999999999999999986
Q ss_pred c
Q 000909 1218 M 1218 (1230)
Q Consensus 1218 ~ 1218 (1230)
.
T Consensus 231 ~ 231 (343)
T TIGR02314 231 H 231 (343)
T ss_pred C
Confidence 5
No 141
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.6e-44 Score=390.27 Aligned_cols=220 Identities=38% Similarity=0.703 Sum_probs=203.1
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhc
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKH 1069 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1069 (1230)
|+|+++|++++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999642 2469999999999999999999999999999999999999999999999999988888788899
Q ss_pred ceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000909 1070 TALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNP 1149 (1230)
Q Consensus 1070 i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p 1149 (1230)
++|+||+|.+|..|++||+.++.+..+.+++.++++..++.+.+..+|.|++|.+.....+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998765444566788889999999999999999999998888999999999999999999999
Q ss_pred CEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEec
Q 000909 1150 TILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERG 1210 (1230)
Q Consensus 1150 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~G 1210 (1230)
++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999986668999999999998888999999999998765
No 142
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.4e-45 Score=357.27 Aligned_cols=208 Identities=30% Similarity=0.456 Sum_probs=187.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh---HHHhh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV---HWYRK 1068 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1068 (1230)
|+|+||+.+|+.. +++|+||||+|++||.+=++|||||||||++++|++...|++|+|.++|.|++.++- ..||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 8999999999854 569999999999999999999999999999999999999999999999999988864 46899
Q ss_pred cceEEcccccCCc-ccHHHHhccCCC--CC----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1069 HTALVSQEPVIYA-GNIRDNIVFGKL--DA----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~-gTIreNl~~g~~--~~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
+||+|+||.-|.. -|+.||++|.-. +. -.+++.++|+.+|+.+....||. .|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 9999999998775 599999997532 22 24567889999999999988874 699999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhc-CEEEEEeCcEEEEecCH
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKKL-DSIALVADGRVVERGTY 1212 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~-D~I~vl~~G~Ive~Gt~ 1212 (1230)
|||+..+|++||-||||-+||+++...|.+.+++.- .|.||++.||+.+.+..+ -|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999999864 599999999999999988 78999999999987654
No 143
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-44 Score=391.04 Aligned_cols=226 Identities=50% Similarity=0.842 Sum_probs=208.7
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
++|+++|++++|++ .+++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 36899999999963 2359999999999999999999999999999999999999999999999999988888888899
Q ss_pred eEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 433 MGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 433 i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
++|++|++.+|++|++||+.++.+....+++.++++..++.++++.+|.|+++.++....+||||||||++|||||+.+|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555556677777788888999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHh
Q 000909 513 VILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+++||||||++||+.+.+.+.+.+.+..+++|+|++||+++.+..||+|++|++|++++.|+.+++.+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999998777899999999999998899999999999999999888765
No 144
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-44 Score=392.73 Aligned_cols=233 Identities=55% Similarity=0.836 Sum_probs=211.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 235999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCE
Q 000909 435 LVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVI 514 (1230)
Q Consensus 435 ~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 514 (1230)
|++|++.+|+.|++||+.++.+..+.+++.+.++..++.+.+..+|.|+++.++.++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655555666677777788888999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHHHH
Q 000909 515 LLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMA 590 (1230)
Q Consensus 515 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 590 (1230)
+||||||++||+++...+.+.|.+..+|+|+|++||+++.+..||++++|++|++++.|+.+++.+. ...|+..+
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~ 233 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMW 233 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHH
Confidence 9999999999999999999999887668999999999999988999999999999999999998774 55555443
No 145
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.9e-44 Score=410.32 Aligned_cols=225 Identities=32% Similarity=0.498 Sum_probs=191.1
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH---Hh
Q 000909 355 IEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW---VR 430 (1230)
Q Consensus 355 i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~---~r 430 (1230)
|+++||+++|+..+ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 246999999999999999999999999999999999999999999999999998876544 57
Q ss_pred hheEEEccCccccc-hhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 431 REMGLVSQEHALFG-TSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~-~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
++|||+||++.+|+ .|++||+.++.. ..+.++..+ .+.+.++.+ |+.......+.+||||||||++||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999996 699999998532 122222211 223344444 67666778888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCc
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDG 584 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 584 (1230)
|+.+|++||||||||+||+.+...+.+.|++.. .|.|+|+|||+++.+.. ||+|++|++|++++.|++++++..+..
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~ 234 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKT 234 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCc
Confidence 999999999999999999999999999999864 38999999999999966 999999999999999999999865443
Q ss_pred HH
Q 000909 585 HY 586 (1230)
Q Consensus 585 ~~ 586 (1230)
.+
T Consensus 235 ~~ 236 (343)
T TIGR02314 235 PL 236 (343)
T ss_pred HH
Confidence 33
No 146
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-41 Score=363.68 Aligned_cols=475 Identities=18% Similarity=0.208 Sum_probs=357.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCChhHHHHHHhhhHHHHHHHHHHHHH
Q 000909 707 YSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVS 786 (1230)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~ 786 (1230)
+...++++.++..+...+.......++++...++|.++.++++..|+.-++ +-.+++++.++++|+..+. +-...++
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerie--r~~~~rlla~L~~Dvr~IS-f~~s~lp 126 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIE--RLGSARLLAGLTSDVRNIS-FAFSRLP 126 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH--Hhcccchhhhhccccccee-ehHhhhH
Confidence 344455555566666777778888999999999999999999999999997 6789999999999999998 4455677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhchHHHHHHchHH
Q 000909 787 LLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAG 866 (1230)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~a~~~~~ 866 (1230)
.+.++....+++.....++++++.++.++.+.+.++..++......+......+...+.....+.-++|.+..+....-.
T Consensus 127 ~~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~ 206 (546)
T COG4615 127 ELVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERA 206 (546)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHH
Confidence 78888888888999999999988887777777776666665555555555666677778888899999999988765322
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 000909 867 --KVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAG 944 (1230)
Q Consensus 867 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~ 944 (1230)
.+.+.|....+...+..............+++.+.+....+.+|+..... .-+.....+..+.+.+...|+.+.+
T Consensus 207 ~~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~---w~st~~a~tivlvlLflr~pL~s~v 283 (546)
T COG4615 207 EYVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG---WASTNVAATIVLVLLFLRTPLLSAV 283 (546)
T ss_pred HHHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhHHHHHHHHHHHHhhHHHHHH
Confidence 22233332222222211111111122334445555555556666554432 2233334445566677788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCcccccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEE
Q 000909 945 SMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVG 1024 (1230)
Q Consensus 945 ~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~va 1024 (1230)
...+.+.++.+|.+++.++-..++..... .....+.| ..||++||.|+|++. .--+.-||++|++||.|=
T Consensus 284 gilP~l~~AqvA~~kiakle~~~~~a~~~-----~~q~~p~~---~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvF 353 (546)
T COG4615 284 GILPTLLTAQVAFNKIAKLELAPYKADFP-----RPQAFPDW---KTLELRNVRFAYQDN--AFHVGPINLTIKRGELVF 353 (546)
T ss_pred hhhhHHHHHHHHHHHHHHhhcCCccccCC-----CCCcCCcc---cceeeeeeeeccCcc--cceecceeeEEecCcEEE
Confidence 99999999999999999887633322111 11111112 359999999999743 234778999999999999
Q ss_pred EEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcccHHHHhccCCCC-CCHHHHHHH
Q 000909 1025 LVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLD-ASENEVVEA 1103 (1230)
Q Consensus 1025 IVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~-~sd~ei~~a 1103 (1230)
|+|.|||||||++++|.|+|.|++|+|++||.+++.=+++++|+-++-|+-|.+||+.++ |..+ ++.+.+...
T Consensus 354 liG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~ 427 (546)
T COG4615 354 LIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKW 427 (546)
T ss_pred EECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998764 3223 778877777
Q ss_pred HHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCe
Q 000909 1104 ARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRT 1181 (1230)
Q Consensus 1104 l~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~T 1181 (1230)
+++..+..... +.+|-=+ ...||-|||.|+|+--|++.+.||++|||=.+--||.=.+...+.+--.. +|||
T Consensus 428 LqrLel~~kts-l~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKT 501 (546)
T COG4615 428 LQRLELAHKTS-LNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKT 501 (546)
T ss_pred HHHHHHhhhhc-ccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCe
Confidence 76665544332 2222111 24699999999999999999999999999999999999999888765433 5999
Q ss_pred EEEEccCchhhhhcCEEEEEeCcEEEEe
Q 000909 1182 TIVVAHRLNTIKKLDSIALVADGRVVER 1209 (1230)
Q Consensus 1182 vI~IaHrl~ti~~~D~I~vl~~G~Ive~ 1209 (1230)
++.|||+-.-...+||++.|++|+++|.
T Consensus 502 I~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 502 IFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred EEEEecCchhhhhHHHHHHHhcCceeec
Confidence 9999999999999999999999999986
No 147
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=372.58 Aligned_cols=224 Identities=29% Similarity=0.447 Sum_probs=186.3
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCC-ChHHHhh
Q 000909 991 KIEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVREL-DVHWYRK 1068 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i-~~~~lR~ 1068 (1230)
.++++|+++.|+.+. -.++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.+.... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 388999999997432 11499999999999999999999999999999999999999999999999776553 3446788
Q ss_pred cceEEcccccC-Cc--ccHHHHhc----cCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1069 HTALVSQEPVI-YA--GNIRDNIV----FGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1069 ~i~~VpQdp~L-f~--gTIreNl~----~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
.+.+|+|||.- ++ -||++-|. ....+...++++++++.+|+.+-.. ...+..||||||||+||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l----------~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFL----------DRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHH----------hcCchhcChhHHHHHHH
Confidence 99999999952 22 36666654 1111234556899999999865332 23345799999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCC--eEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGR--TTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~--TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||||.-+|++||||||||+||.-.++.|++.+.+..+++ |.|+|||+++.+.. ||||+||++|+++|.++-.++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 999999999999999999999999999999999987654 99999999999975 799999999999999999999887
Q ss_pred -ccccHH
Q 000909 1219 -RGAFFN 1224 (1230)
Q Consensus 1219 -~g~y~~ 1224 (1230)
...|-+
T Consensus 233 ~~h~ytr 239 (252)
T COG1124 233 PSHPYTR 239 (252)
T ss_pred CccHHHH
Confidence 444544
No 148
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-44 Score=392.66 Aligned_cols=230 Identities=56% Similarity=0.885 Sum_probs=209.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++. ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999743 235999999999999999999999999999999999999999999999999998887778889999
Q ss_pred EEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCE
Q 000909 435 LVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVI 514 (1230)
Q Consensus 435 ~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 514 (1230)
|++|++.+|+.|++||+.++......+++.+.++..++.++++.+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987654455566667777788899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHH
Q 000909 515 LLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHY 586 (1230)
Q Consensus 515 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 586 (1230)
+||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+.+++... .+.|
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~ 230 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVY 230 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccch
Confidence 9999999999999999999999988778999999999999988999999999999999999998764 4433
No 149
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5e-43 Score=430.91 Aligned_cols=199 Identities=27% Similarity=0.440 Sum_probs=167.4
Q ss_pred CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC--CCCeEEECCeecCCCChHHHhhcceEEcccc-cCCcc
Q 000909 1006 DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV--EQGSVRVDGMDVRELDVHWYRKHTALVSQEP-VIYAG 1082 (1230)
Q Consensus 1006 ~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~idG~di~~i~~~~lR~~i~~VpQdp-~Lf~g 1082 (1230)
.+..|+|||=-++||--+|++|.||||||||++.|.+=-.- .+|+|+|||.+..+ +..++++|||.|++ ++=.-
T Consensus 803 ~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~~ 879 (1391)
T KOG0065|consen 803 TRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPEL 879 (1391)
T ss_pred ceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCccc
Confidence 34589999999999999999999999999999999986432 47999999999865 78999999999877 56566
Q ss_pred cHHHHhccCC----C-CCCHHH----HHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCC-CEE
Q 000909 1083 NIRDNIVFGK----L-DASENE----VVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNP-TIL 1152 (1230)
Q Consensus 1083 TIreNl~~g~----~-~~sd~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p-~IL 1152 (1230)
||||-|.|.. | +.+++| ++++.+..++.++- |..||..|..||..||.||.||--|+.|| .||
T Consensus 880 TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~il 952 (1391)
T KOG0065|consen 880 TVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSIL 952 (1391)
T ss_pred chHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCceeE
Confidence 9999998742 2 344433 45566666665543 45688888999999999999999999999 899
Q ss_pred EeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchh--hhhcCEEEEEe-CcEEEEecCHhH
Q 000909 1153 LLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNT--IKKLDSIALVA-DGRVVERGTYAQ 1214 (1230)
Q Consensus 1153 lLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t--i~~~D~I~vl~-~G~Ive~Gt~~e 1214 (1230)
.||||||+||+++...|.+.+++.. .|+||++.=|.++. .+..|+++.|+ .|+.|-.|+..+
T Consensus 953 FLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 953 FLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 9999999999999999999999975 69999999999986 35679999997 589998887643
No 150
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.1e-43 Score=391.98 Aligned_cols=227 Identities=63% Similarity=0.979 Sum_probs=206.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|+++.|++..++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533346999999999999999999999999999999999999999999999999998777777788999
Q ss_pred EEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCE
Q 000909 435 LVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVI 514 (1230)
Q Consensus 435 ~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 514 (1230)
|++|++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999987554445556666666778888999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhh
Q 000909 515 LLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 515 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+||||||++||+.+.+.+.+.|++..+|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999887678999999999999988999999999999999999888764
No 151
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-44 Score=369.09 Aligned_cols=229 Identities=31% Similarity=0.437 Sum_probs=184.8
Q ss_pred cEEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCC-CHHHHhh
Q 000909 354 EIEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRL-QLKWVRR 431 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~-~~~~~r~ 431 (1230)
-++++|+++.|+.+. ..++|+||||+|.+||++||||+||||||||.++|+|+.+|++|+|.++|.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997432 12499999999999999999999999999999999999999999999999877654 3446788
Q ss_pred heEEEccCcc--ccc-hhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHHHHHHHHHH
Q 000909 432 EMGLVSQEHA--LFG-TSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 432 ~i~~v~Q~~~--l~~-~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~iARa 507 (1230)
.|-+|||||. |-+ -||++-|.=+.......+..+. +.+.++.+ |+. ....+.+.+||||||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~-----i~~~L~~V--gL~~~~l~R~P~eLSGGQ~QRiaIARA 155 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQR-----IAELLDQV--GLPPSFLDRRPHELSGGQRQRIAIARA 155 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHH-----HHHHHHHc--CCCHHHHhcCchhcChhHHHHHHHHHH
Confidence 9999999996 333 2777776532211111111111 22333333 554 44677889999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCc
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDG 584 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 584 (1230)
|.-+|++||||||||+||+...+.|.+.+.++.+ +-|.|+|||+++.+.+ ||||+||++|+++|.++.+++......
T Consensus 156 L~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~~~h 235 (252)
T COG1124 156 LIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSHPSH 235 (252)
T ss_pred hccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcCCcc
Confidence 9999999999999999999999999999988764 5699999999999988 999999999999999999999876455
Q ss_pred HHHHH
Q 000909 585 HYAKM 589 (1230)
Q Consensus 585 ~~~~~ 589 (1230)
.|.+.
T Consensus 236 ~ytr~ 240 (252)
T COG1124 236 PYTRE 240 (252)
T ss_pred HHHHH
Confidence 56543
No 152
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.6e-44 Score=365.75 Aligned_cols=221 Identities=30% Similarity=0.489 Sum_probs=191.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChH---HHh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVH---WYR 1067 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1067 (1230)
.|++++|+++|.+ +.||+||||+|++||.+||+|+||||||||++++.|+..|++|+|+++|.|+.+++-+ .+|
T Consensus 8 ~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 5999999999963 4699999999999999999999999999999999999999999999999999999864 569
Q ss_pred hcceEEcccccCCcc-cHHHHhccCCC---CCCHHHHHH----HHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1068 KHTALVSQEPVIYAG-NIRDNIVFGKL---DASENEVVE----AARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~g-TIreNl~~g~~---~~sd~ei~~----al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
+++|+++|.-.||+. ||+||+.|.-. +.+++++.+ .++.+|+..-+.. .-++.||||.+.|.
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~----------~~PsELSGGM~KRv 154 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAAD----------LYPSELSGGMRKRV 154 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhh----------hCchhhcchHHHHH
Confidence 999999999999986 99999998532 344554443 3555665544221 23467999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhc-CEEEEEeCcEEEEecCHhHHh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKKL-DSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~-D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
|||||+.-+|+||++|||||+|||-+...+-+.|+++.. |.|+++|||+++++..+ |||+++.+|+|+..|+++|+.
T Consensus 155 aLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~ 234 (263)
T COG1127 155 ALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELL 234 (263)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999888653 88999999999999765 999999999999999999999
Q ss_pred hcccccHH
Q 000909 1217 HMRGAFFN 1224 (1230)
Q Consensus 1217 ~~~g~y~~ 1224 (1230)
+.+..|-+
T Consensus 235 ~sd~P~v~ 242 (263)
T COG1127 235 ASDDPWVR 242 (263)
T ss_pred hCCCHHHH
Confidence 98665443
No 153
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-44 Score=383.89 Aligned_cols=219 Identities=35% Similarity=0.571 Sum_probs=193.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecC-CCCHHHHhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIR-RLQLKWVRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~-~~~~~~~r~~ 432 (1230)
-++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||++++.|++.|++|+|.++|.++. +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 47899999999854 57999999999999999999999999999999999999999999999999998 4788899999
Q ss_pred eEEEccCc--cccchhHHHHHhcCCCCC--CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 433 MGLVSQEH--ALFGTSIKDNIMFGKLDA--TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 433 i~~v~Q~~--~l~~~ti~~Ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
+|||+|+| .+|..||.|.++||..+. +.+++.+..+ +.++.. |+.....+...+||||||||+|||.+|
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~-----~~l~~v--gl~~~~~r~p~~LSGGqkqRvaIA~vL 153 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVA-----EALELV--GLEELLDRPPFNLSGGQKQRVAIAGVL 153 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHH-----HHHHHc--CchhhccCCccccCCcceeeHHhhHHH
Confidence 99999999 789999999999996542 3333333222 223333 666667788899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+.+|+++|||||||+||+...+.+.+.++++.+ |+|+|++||+++.+.. ||++++|++|+++.+|+++++.++
T Consensus 154 a~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 154 AMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999999999998753 5899999999999977 999999999999999999998874
No 154
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4e-44 Score=348.50 Aligned_cols=212 Identities=29% Similarity=0.494 Sum_probs=189.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|.+++|.|+|...+ =.++++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|...-++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56889999996432 357899999999999999999999999999999999999999999999887764 57799
Q ss_pred EEcccccCCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGK-LD-----ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~-~~-----~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
+++||..||.- ||++|+.+|. |. ...+.+..++.++|+.+|..+||. .||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999975 9999999984 32 234678899999999999999983 699999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhcccc
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHMRGA 1221 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~g~ 1221 (1230)
|+|+.|||+||||.|+|||.-...+...+.+.. ++.|+++|||.++-++. +|+++++++|||++.|+-+++++.++.
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~~ 223 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKAS 223 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCCh
Confidence 999999999999999999999999999998875 47899999999998865 699999999999999999999987543
No 155
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-44 Score=396.42 Aligned_cols=213 Identities=33% Similarity=0.529 Sum_probs=192.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+.+|.+. .+|+|+||+|+.||.++|+|||||||||++++|+||.+|++|+|.|||.|+.++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999632 2899999999999999999999999999999999999999999999999999999875 899
Q ss_pred eEEcccccCCcc-cHHHHhccCCCC------CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKLD------ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~~------~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
++|+|++.||.- ||+|||+|+... ..++++.++++..++.+.+++.| ..||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999975 999999998431 23567888999999988877655 579999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
||+++|++++||||.|+||++....+...|.++.+ +.|+|.|||+...+. .+|||+||++|+|.+.|+|.|+.+++
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999999999999988653 689999999988765 57999999999999999999999873
No 156
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=9.7e-44 Score=389.21 Aligned_cols=219 Identities=49% Similarity=0.811 Sum_probs=200.2
Q ss_pred ccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHh
Q 000909 988 ISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYR 1067 (1230)
Q Consensus 988 ~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 1067 (1230)
..|.|+++|++++|+++.+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999753234699999999999999999999999999999999999999999999999999888888888
Q ss_pred hcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHcc
Q 000909 1068 KHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIR 1147 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~ 1147 (1230)
++++|+||+|.+|++|++||+.++......+++++..+..++.++++.+|.|+++.+.....+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999987654444556666667778899999999999998999999999999999999999999
Q ss_pred CCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEE
Q 000909 1148 NPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRV 1206 (1230)
Q Consensus 1148 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~I 1206 (1230)
+|++|||||||++||+++.+.+.+.+++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998778899999999999988999999999975
No 157
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-44 Score=393.00 Aligned_cols=218 Identities=30% Similarity=0.482 Sum_probs=186.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh---HHHhh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV---HWYRK 1068 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1068 (1230)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 359999999999999999999999999999999999999999999999999988764 56789
Q ss_pred cceEEcccccCCcc-cHHHHhccCCC---CCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1069 HTALVSQEPVIYAG-NIRDNIVFGKL---DASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~g-TIreNl~~g~~---~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
+++||||++.+|.+ |++||+.++.. ..+.+ ++.++++..++.++. .....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 99999999999986 99999986521 22322 344455555554432 2334579999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhh
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
|||||+++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999998875 89999999999999999999987
Q ss_pred cccccH
Q 000909 1218 MRGAFF 1223 (1230)
Q Consensus 1218 ~~g~y~ 1223 (1230)
....|.
T Consensus 227 ~~~~~~ 232 (235)
T cd03261 227 SDDPLV 232 (235)
T ss_pred CCChhh
Confidence 655454
No 158
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.1e-43 Score=385.27 Aligned_cols=220 Identities=35% Similarity=0.575 Sum_probs=203.8
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
+.|+++|++++|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999743 3469999999999999999999999999999999999999999999999999988888888999
Q ss_pred eEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 433 MGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 433 i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
++|++|++.+++.|++||+.+... ...+++.++++..++.+++..+|.|+++..++.+.+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999986543 4566778888888899999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecC
Q 000909 513 VILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGT 574 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 574 (1230)
+++||||||++||+.+++.+.+.+++..+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999998777899999999999998899999999999998875
No 159
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-43 Score=398.34 Aligned_cols=218 Identities=30% Similarity=0.466 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38999999999642224599999999999999999999999999999999999999999999999999988888899999
Q ss_pred eEEcccc--cCCcccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1071 ALVSQEP--VIYAGNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1071 ~~VpQdp--~Lf~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
+||||+| .++..||+|||.++.. +.+ ++.+.++++..++.++.+.. ..+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKERE-----------PARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4667899999987632 222 24567777888877665443 357999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
|||+++|++|||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||+|++|++|++++.|+++++.+..
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 999999999999999999999999999999998753 89999999999999889999999999999999999987653
No 160
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-43 Score=362.45 Aligned_cols=215 Identities=30% Similarity=0.511 Sum_probs=191.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC---hHHHh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD---VHWYR 1067 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~lR 1067 (1230)
.|+++||+.+||+ +..+|+||||+|++||.|||+||||||||||+++|.|+.+|++|+|.++|.++...+ ++.+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 457999999999999999999999999999999999999999999999999999887 67788
Q ss_pred hcceEEcccccCCcc-cHHHHhccCCCC-----------CCH---HHHHHHHHHhchHHHHHhccccccccccCCCCCCC
Q 000909 1068 KHTALVSQEPVIYAG-NIRDNIVFGKLD-----------ASE---NEVVEAARAANAHEFISSLKDGYETECGERGVQLS 1132 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~g-TIreNl~~g~~~-----------~sd---~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1132 (1230)
+++|+|+|+|.|-.. |+-+|+..|+.+ .+. ....+||+++|+.++.- .+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-----------qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-----------QRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-----------HHhccCC
Confidence 999999999998764 999999877532 233 34667888888877643 3456899
Q ss_pred hhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEe
Q 000909 1133 GGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVER 1209 (1230)
Q Consensus 1133 gGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~ 1209 (1230)
|||+||++|||||..+|+|+|-|||+|+|||++.+.|.+.|++.. .|.|+|+.-|.++..++ ||||+=|++|+|+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999864 58999999999999976 599999999999999
Q ss_pred cCHhHHhhc
Q 000909 1210 GTYAQLTHM 1218 (1230)
Q Consensus 1210 Gt~~eLl~~ 1218 (1230)
|++.||-+.
T Consensus 230 g~~~el~~~ 238 (258)
T COG3638 230 GPASELTDE 238 (258)
T ss_pred CChhhhhHH
Confidence 999997653
No 161
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.8e-43 Score=368.96 Aligned_cols=207 Identities=31% Similarity=0.461 Sum_probs=174.9
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChH---HH-
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVH---WY- 1066 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~l- 1066 (1230)
++++||+..|.... ..++|+++||+|++||.|||+||||||||||+++|.++..|++|.|.++|.|+..++.+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67899999996432 23699999999999999999999999999999999999999999999999999999853 34
Q ss_pred hhcceEEcccccCCcc-cHHHHhccC----CCCC--CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1067 RKHTALVSQEPVIYAG-NIRDNIVFG----KLDA--SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1067 R~~i~~VpQdp~Lf~g-TIreNl~~g----~~~~--sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
|++||+|+|+..|++. |++||+.++ .... ..+...+.++..|+.+... ...+.+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 4679999999998875 999999842 1111 1334455555556655433 133568999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCcEEEE
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKKLDSIALVADGRVVE 1208 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive 1208 (1230)
||||||+.+|+|++.||||.+||.+|.+.|.+.+++.. .|+|+|+|||+......|||++.|.||++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999874 3789999999999999999999999999543
No 162
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=9.1e-44 Score=389.71 Aligned_cols=212 Identities=35% Similarity=0.585 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc-----cCCCCeEEECCeecCCCC--hH
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFY-----DVEQGSVRVDGMDVRELD--VH 1064 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~-----~p~~G~I~idG~di~~i~--~~ 1064 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.+||.++.+.+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 35999999999999999999999999999999999999 999999999999998876 66
Q ss_pred HHhhcceEEcccccCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1065 WYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1065 ~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
.+|++++|+||++.+|..|++||+.++.. .. .++++.++++..++.+...+.++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 78899999999999998899999986521 11 12445666777776554433211 4689999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
|++||||++++|++|||||||++||+++.+.+.+.|++..+.+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999988655899999999998864 899999999999999998764
No 163
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-43 Score=375.77 Aligned_cols=210 Identities=27% Similarity=0.494 Sum_probs=185.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++|++|+|.++ +||+||||+|++||.+||+||||||||||+++++|+..|++|+|.++|.++++... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999632 59999999999999999999999999999999999999999999999998876543 5789
Q ss_pred eEEcccc---cCCcccHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1071 ALVSQEP---VIYAGNIRDNIVFGKLD----------ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1071 ~~VpQdp---~Lf~gTIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
|||||.. .-|.-||+|=+.+|... .+.+++.+||+.+++.++.. -++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~-------r~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRD-------RQIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhC-------Cccc----ccCcHHHH
Confidence 9999965 35788999999887432 12478999999999998854 3454 59999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM-GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
|+.|||||+.+|++|+|||||+++|+.++..+.+.|.++.+ |||||+|+|+++.+.. +|+|+.|+ ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999875 9999999999999976 69999995 678899999998
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 764
No 164
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-43 Score=375.70 Aligned_cols=209 Identities=31% Similarity=0.499 Sum_probs=179.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|.++ ++|+||||++++|++++|+||||||||||+|+|+|+.+|++|+|.++|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 58999999999742 49999999999999999999999999999999999999999999999988765432 4689
Q ss_pred EEEccCc---cccchhHHHHHhcCCCCC----------CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHH
Q 000909 434 GLVSQEH---ALFGTSIKDNIMFGKLDA----------TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQ 500 (1230)
Q Consensus 434 ~~v~Q~~---~l~~~ti~~Ni~~~~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 500 (1230)
|||||.. |-|+-||+|-+.+|.... +.+++.++++.++ +.....+.-.+|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vg-----------m~~~~~r~i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVG-----------MEDLRDRQIGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcC-----------chhhhCCcccccCcHHHH
Confidence 9999965 568899999999885421 1244555555554 444455666789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
|+.|||||+++|++|+|||||+++|+.++..+.+.|+++. +|+||++|||+++.+.. +|+|+.|+ ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 9999999999999999999999999999999999999875 49999999999999865 99999995 568889999998
Q ss_pred Hh
Q 000909 579 IN 580 (1230)
Q Consensus 579 ~~ 580 (1230)
.+
T Consensus 226 ~~ 227 (254)
T COG1121 226 LT 227 (254)
T ss_pred cC
Confidence 76
No 165
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.7e-43 Score=378.13 Aligned_cols=206 Identities=33% Similarity=0.601 Sum_probs=184.6
Q ss_pred cccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH
Q 000909 987 KISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY 1066 (1230)
Q Consensus 987 ~~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l 1066 (1230)
+..+.|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+
T Consensus 2 ~~~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 2 PEHGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 445789999999999742 2369999999999999999999999999999999999999999999999999998888889
Q ss_pred hhcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1067 RKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1067 R~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
|++++||||+|.+|++|+++|+.+.+ ..+++++.++++ +......|||||+||++||||++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~-~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~ 141 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFD-EYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALL 141 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccC-CCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999997653 234444444433 23567789999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCH
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTY 1212 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~ 1212 (1230)
++|++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 142 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 142 KRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999999998778999999999999988999999999999998874
No 166
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=7.1e-43 Score=380.88 Aligned_cols=220 Identities=40% Similarity=0.669 Sum_probs=199.7
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
++|+++|++++|++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999642 2469999999999999999999999999999999999999999999999999987777777889
Q ss_pred eEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 433 MGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 433 i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
++|++|++.+|..|++||+.++......+++.+.++..++.+.+...|.|++|.+.....+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999889999999875444455667777888888889999999999999899999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEec
Q 000909 513 VILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 573 (1230)
+++||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999876568999999999988779999999999998754
No 167
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-43 Score=398.81 Aligned_cols=222 Identities=26% Similarity=0.431 Sum_probs=190.5
Q ss_pred ccEEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCC------
Q 000909 353 GEIEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRL------ 424 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~------ 424 (1230)
.-|+++|++|+|++.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3599999999997421 24699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhhheEEEccCc--cccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcC
Q 000909 425 ----------QLKWVRREMGLVSQEH--ALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYE-TKVGE 489 (1230)
Q Consensus 425 ----------~~~~~r~~i~~v~Q~~--~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~ 489 (1230)
+...+|++|+||+|+| .+|+.|++|||.++.. ..+.++..+ .+.+.++.+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcC
Confidence 3457889999999998 6899999999998742 122332211 223556666 775 56788
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCCeEEEEecCchhhh-ccCEEEEEeCC
Q 000909 490 RGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQA-SLGRTTLVVAHKLSTVR-NADLIAVVDNG 567 (1230)
Q Consensus 490 ~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~itH~l~~~~-~~d~i~~l~~G 567 (1230)
.+.+||||||||++|||||+++|++|||||||++||+.+++.+.+.|.++ .+|+|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 89999999999999999999999999999999999999999999999876 35899999999999875 59999999999
Q ss_pred eEEEecChhHHHhh
Q 000909 568 CLVEIGTHNDLINR 581 (1230)
Q Consensus 568 ~i~~~g~~~~l~~~ 581 (1230)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998763
No 168
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-43 Score=389.18 Aligned_cols=218 Identities=32% Similarity=0.476 Sum_probs=191.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCCCeEEECCeecCCCChHHHh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD---VEQGSVRVDGMDVRELDVHWYR 1067 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~lR 1067 (1230)
.|+++||+++|++ .++|+|+||++++||.+||+|+||||||||+++|+|+++ |++|+|.+||.|+.+.+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 359999999999999999999999999999999999985 6899999999999988888889
Q ss_pred hcceEEcccccCCcccHHHHhccCCC--------CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1068 KHTALVSQEPVIYAGNIRDNIVFGKL--------DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~gTIreNl~~g~~--------~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
++++|+||+|.+|..|++||+.++.. ...++++.++++..++.+++..+ ..+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHH
Confidence 99999999999999999999986521 11223466677777776554332 3456678999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
+||||++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999998877899999999999886 5799999999999999999999864
No 169
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.8e-44 Score=375.21 Aligned_cols=221 Identities=33% Similarity=0.506 Sum_probs=181.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCe---ecCCCCHHHHh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGV---DIRRLQLKWVR 430 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~---~i~~~~~~~~r 430 (1230)
.|+++|+++.|+. ..+++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.++|. |.++.. .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 4788999999974 45899999999999999999999999999999999999999999999999 555533 334
Q ss_pred hheEEEccCccccc-hhHHHHHhcCCCCC--CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 431 REMGLVSQEHALFG-TSIKDNIMFGKLDA--TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~-~ti~~Ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
++||+|+|+..||. .||++||+||.+-. ...+. ..+..+.+.++-+ .++..-...+.+||||||||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~---~~r~rv~elL~lv--qL~~la~ryP~QLSGGQrQRVALARA 151 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEA---EIRARVEELLRLV--QLEGLADRYPAQLSGGQRQRVALARA 151 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChh---hHHHHHHHHHHHh--cccchhhcCchhcChHHHHHHHHHHH
Confidence 68999999999995 59999999996311 11111 1111222222222 34444456778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCc
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDG 584 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 584 (1230)
|..+|++|+||||+++||++-.+.+.+.+++.. -|.|+++|||+.+++.. ||||++|++|+|...|+++|+...+..
T Consensus 152 LA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s 231 (345)
T COG1118 152 LAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPAS 231 (345)
T ss_pred hhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCc
Confidence 999999999999999999999999999988753 38999999999999755 999999999999999999999876443
No 170
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1e-42 Score=381.04 Aligned_cols=220 Identities=50% Similarity=0.806 Sum_probs=197.6
Q ss_pred CccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH
Q 000909 350 EVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV 429 (1230)
Q Consensus 350 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~ 429 (1230)
...+.|+++|++++|+++...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+
T Consensus 7 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 86 (226)
T cd03248 7 HLKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYL 86 (226)
T ss_pred CcCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHH
Confidence 34578999999999975323469999999999999999999999999999999999999999999999999987777778
Q ss_pred hhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 430 RREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 430 r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
++.++|++|++.+|+.|++||+.++.......++.+.+....+.++++.+|.|+++.+++.+.+||||||||++||||++
T Consensus 87 ~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 87 HSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred HhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 88999999999999999999999875444444555555556678889999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeE
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCL 569 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i 569 (1230)
++|+++||||||++||+.+...+.+.++++.+++|+|++||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999987667999999999999988999999999974
No 171
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-43 Score=366.51 Aligned_cols=198 Identities=31% Similarity=0.464 Sum_probs=174.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.+++++|+.+|+. ..||+|+||+|++||.|+|+||||||||||++++.|+..|++|+|.+||.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4899999999974 4699999999999999999999999999999999999999999999999988543 3569
Q ss_pred eEEcccccCCc-ccHHHHhccCCCCC------CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYA-GNIRDNIVFGKLDA------SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~-gTIreNl~~g~~~~------sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+||+|++.||. -||++|+.++-... ..+.+.++++.+|+.+|-+..| .+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 99999999998 69999999875421 2345778888999988866654 579999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeC--cEEE
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVAD--GRVV 1207 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~--G~Iv 1207 (1230)
||+.+|+||+||||.+|||+.|...+|+-+.+.. .++||++|||+++... -+|||+||.+ |+|.
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 9999999999999999999999999999998875 3699999999998764 5799999999 5553
No 172
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-43 Score=394.26 Aligned_cols=218 Identities=28% Similarity=0.490 Sum_probs=185.8
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC--hHHHh
Q 000909 992 IEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD--VHWYR 1067 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--~~~lR 1067 (1230)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++++.+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 136999999999999999999999999999999999999999999999999998754 45788
Q ss_pred hcceEEcccc--cCCcccHHHHhccCCC--CCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1068 KHTALVSQEP--VIYAGNIRDNIVFGKL--DASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1068 ~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
++++||||+| .+|+.|++||+.++.. +.+.+ ++.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5788999999987531 23333 344555555553 01223455678999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 789999999999985 58999999999999999999987
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 53
No 173
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-42 Score=382.50 Aligned_cols=216 Identities=35% Similarity=0.512 Sum_probs=185.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH---HHHhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL---KWVRR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~---~~~r~ 431 (1230)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 359999999999999999999999999999999999999999999999999987664 56788
Q ss_pred heEEEccCccccch-hHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 432 EMGLVSQEHALFGT-SIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~~-ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
.|+||+|++.+|+. |++||+.++.. ..+.++..+ .+.+.++.+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIRE-----IVLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999999986 99999987532 122222221 122344555 66656677778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|+.+|+++||||||++||+.+++.+.+.+++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 999999999999999999999999999998864 38999999999999876 99999999999999999998865
No 174
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-42 Score=382.63 Aligned_cols=215 Identities=33% Similarity=0.541 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.|+...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999888888889999
Q ss_pred eEEcccccCCcccHHHHhccCCC--CCCHHHHHHHHHHhchH-HHHHhccccccccccCCCCCCChhHHHHHHHHHHHcc
Q 000909 1071 ALVSQEPVIYAGNIRDNIVFGKL--DASENEVVEAARAANAH-EFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIR 1147 (1230)
Q Consensus 1071 ~~VpQdp~Lf~gTIreNl~~g~~--~~sd~ei~~al~~a~l~-~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~ 1147 (1230)
+|+||+|.+|+.|+++|+.++.. ...++++.+.++..++. ++ .......||||||||++||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY-----------ATRDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH-----------hhCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999987532 11233455555555552 22 234566899999999999999999
Q ss_pred CCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1148 NPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1148 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
+|++|||||||++||+++.+.+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 223 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNP 223 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCC
Confidence 999999999999999999999999999864 38999999999999875 8999999999999999999998653
No 175
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-43 Score=393.06 Aligned_cols=213 Identities=31% Similarity=0.525 Sum_probs=192.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+.+|. +..+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+.+++++ ++.|
T Consensus 5 ~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 599999999996 45699999999999999999999999999999999999999999999999999999886 6899
Q ss_pred eEEcccccCCc-ccHHHHhccCCC---CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1071 ALVSQEPVIYA-GNIRDNIVFGKL---DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1071 ~~VpQdp~Lf~-gTIreNl~~g~~---~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
++|+|+..||. .||+||++||.. ...+ +.+.++++.+++.++-.+.| ..|||||+||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHH
Confidence 99999999997 599999999853 1232 36788999999988765544 57999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTI-KKLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
|||..+|++||||||-||||.+-...++.-+++.. .|.|.|.|||+-+.. ..+|||+||++|+|...|+|+|+..++
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999999988764 388999999998875 567999999999999999999999874
No 176
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-42 Score=389.70 Aligned_cols=213 Identities=31% Similarity=0.553 Sum_probs=188.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
-|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 23599999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEcccc--cCCcccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1071 ALVSQEP--VIYAGNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1071 ~~VpQdp--~Lf~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
+||||+| .+|..|+++|+.++.. +.+ ++++.++++..++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6888999999987632 222 245667777778776654433 47999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHh
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999999999874 4899999999999985 58999999999999999987653
No 177
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8.9e-43 Score=384.42 Aligned_cols=217 Identities=28% Similarity=0.486 Sum_probs=184.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH-hhcc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY-RKHT 1070 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 1070 (1230)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999963 359999999999999999999999999999999999999999999999999988877654 5679
Q ss_pred eEEcccccCCcc-cHHHHhccCCCCC------------CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKLDA------------SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~~~------------sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
+|+||+|.+|.+ |++||+.++.... ..++.. ..+.+.++.+ |++.........|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREAR-----ERAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHH-----HHHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 999999999986 9999998653211 011111 1123344443 4544455666789999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
|++||||++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999999999999875 68999999999999866 899999999999999999998
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
++.
T Consensus 231 ~~~ 233 (236)
T cd03219 231 RNN 233 (236)
T ss_pred ccC
Confidence 754
No 178
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3.8e-39 Score=378.19 Aligned_cols=471 Identities=16% Similarity=0.130 Sum_probs=351.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhccCCCChh---HHHHHHHHhHHHHHHHHhh
Q 000909 76 SLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTS---EVINSISKDTSLIQELLSE 152 (1230)
Q Consensus 76 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~f~~~~~~g~g---~l~~r~~~D~~~i~~~~~~ 152 (1230)
...+..++.+..++...+.|+...+..+.-..+-+.+.++-++...-|+.. ...|.+ ..=+|+..|+..+.+...+
T Consensus 89 l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~-~~~~~~~~dNpDQRi~eDi~~~t~~t~~ 167 (604)
T COG4178 89 LQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA-QAGGIGLIDNPDQRIQEDIRNFTETTLD 167 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH-hcccccCCCChHHhHHHHHHHHHhhHHH
Confidence 334444444445555566666666666666666667777777777444443 111101 2237999999998888777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000909 153 KVPIFVMNASVFISGLAFSTYFSW---------------RLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAI 217 (1230)
Q Consensus 153 ~~~~~~~~~~~~i~~~~~~~~~~~---------------~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (1230)
....++.++++++...++++..+- .+..++++.+++..++..+++|...+..-+.++..+..-..
T Consensus 168 l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~ 247 (604)
T COG4178 168 LSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYS 247 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHH
Confidence 777788888777776666663322 23334444555556666678888888888888888888888
Q ss_pred HHHHHccHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHH
Q 000909 218 VEQALSSIKTVYSFSAERRIIDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYA 296 (1230)
Q Consensus 218 ~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~ 296 (1230)
+.-.-++...|-.|+.|+.+.++.++......+...+......-...+. ....++.++-...++-....|.++.|.++.
T Consensus 248 Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmq 327 (604)
T COG4178 248 LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQ 327 (604)
T ss_pred HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHH
Confidence 8899999999999999999988877766665554433322222111111 222222233333445556789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CCCCCCCCCc--ccCCccccEEEEEEEEECCCCCC
Q 000909 297 AGISFILSGLSLGSALPELKYFTEASIAASRIFDRIDRVP-----EIDGEDTKGL--VLDEVRGEIEFEHVKFSYPSRPD 369 (1230)
Q Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~-----~~~~~~~~~~--~~~~~~~~i~~~~v~~~y~~~~~ 369 (1230)
....+......++.+...+..+..-.+...|+.++.+... .......... ..+..+..|+++|++..-|+.
T Consensus 328 a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-- 405 (604)
T COG4178 328 AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--
Confidence 8888888888999999999999999999999988764321 1111110000 001114689999999998753
Q ss_pred CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccchhHHH
Q 000909 370 SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKD 449 (1230)
Q Consensus 370 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ 449 (1230)
...+++.||++++||.+-|.||||||||||++.|+|+++--+|+|.+... ..+-|+||.|++-.||.||
T Consensus 406 ~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~-----------~~~lflpQ~PY~p~GtLre 474 (604)
T COG4178 406 QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPAD-----------SALLFLPQRPYLPQGTLRE 474 (604)
T ss_pred CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCC-----------CceEEecCCCCCCCccHHH
Confidence 36899999999999999999999999999999999999999999977621 3589999999999999999
Q ss_pred HHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHH
Q 000909 450 NIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSE 527 (1230)
Q Consensus 450 Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~ 527 (1230)
-|+|.+.. .+++++.+++.++++.++++++.+- ..-...||+|||||+|+||.++++|++++|||+|||||++
T Consensus 475 ~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~-----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~ 549 (604)
T COG4178 475 ALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEE-----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEE 549 (604)
T ss_pred HHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhcc-----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChH
Confidence 99998654 6889999999999999999987432 2234579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEe
Q 000909 528 SETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVD 565 (1230)
Q Consensus 528 ~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~ 565 (1230)
+|..+.+.+++...+.|+|-|.||.......++.+-++
T Consensus 550 ~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 550 TEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 99999999999888999999999998877766665554
No 179
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-42 Score=390.28 Aligned_cols=217 Identities=30% Similarity=0.511 Sum_probs=191.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
-|+++||+++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 38999999999642 34699999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEcccc--cCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1071 ALVSQEP--VIYAGNIRDNIVFGKL--DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1071 ~~VpQdp--~Lf~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
+|+||+| .+++.|++|||.++.. ..+. +++.++++..++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 5677899999987521 1222 34666777777776655443 47999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
|||+.+|+||||||||++||+.+...+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+..
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKSG 231 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcCH
Confidence 999999999999999999999999999999998763 78999999999999989999999999999999999987653
No 180
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-42 Score=396.80 Aligned_cols=221 Identities=28% Similarity=0.454 Sum_probs=189.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5899999999963 4589999999999999999999999999999999999999999999999999877653 5789
Q ss_pred EEEccCccccch-hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
|||+|++.+|+. |++|||.|+... .+.++..+ .+.+.++.+ |+.......+.+||||||||++|||||+.
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~~--gl~~~~~r~~~~LSgGq~QRVaLARaL~~ 153 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQ-----RVKEALELV--DLAGFEDRYVDQISGGQQQRVALARALIL 153 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 999999999975 999999987431 12222221 223334444 66666677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHH
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHY 586 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 586 (1230)
+|++||||||||+||+.+.+.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 154 ~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~ 232 (351)
T PRK11432 154 KPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRF 232 (351)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchH
Confidence 9999999999999999999999999988643 8999999999999855 99999999999999999999987544333
No 181
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-42 Score=398.90 Aligned_cols=220 Identities=29% Similarity=0.458 Sum_probs=188.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++ +..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||.++.+.++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 24599999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEccCccccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
|||+|++.+|+ .||+|||.|+... .+..+.. ..+.+.++.+ |++........+||||||||++|||||++
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~~LSgGq~QRvalARAL~~ 151 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIE-----ERVAEAARIL--ELEPLLDRKPRELSGGQRQRVAMGRAIVR 151 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHH-----HHHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999996 4999999987431 1222221 1223445555 67667777888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCc
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDG 584 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 584 (1230)
+|++||||||||+||+.++..+.+.++++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++..
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 152 EPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999987643 8999999999998865 999999999999999999999875443
No 182
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-42 Score=400.86 Aligned_cols=216 Identities=32% Similarity=0.493 Sum_probs=185.6
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH---Hh
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW---YR 1067 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 1067 (1230)
|+++||+++|+... +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996211 346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred hcceEEcccccCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1068 KHTALVSQEPVIYA-GNIRDNIVFGKL--DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~-gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
++++||||++.+|. .|++||+.++.. ..+. +++.+.++..++.++. .....+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKA-----------DRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHHHH
Confidence 89999999999986 699999986521 2222 2344555555554433 3345689999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhh
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
|||||+++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999875 89999999999999999999986
Q ss_pred c
Q 000909 1218 M 1218 (1230)
Q Consensus 1218 ~ 1218 (1230)
.
T Consensus 231 ~ 231 (343)
T PRK11153 231 H 231 (343)
T ss_pred C
Confidence 6
No 183
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-42 Score=399.37 Aligned_cols=213 Identities=27% Similarity=0.469 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.++. ++++
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 4599999999999999999999999999999999999999999999999999887753 6889
Q ss_pred eEEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+||+|++.+|.. |++||+.|+.. ..+ ++++.++++..++.++..+ ....||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r-----------~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDR-----------YVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 999999999975 99999998632 122 3456677777777665433 34579999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
||+++|++||||||||+||+.+...+++.|++..+ ++|+|+|||+++.+. -||+|+||++|+|++.|+|+++.++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999999998754 799999999999875 57999999999999999999998763
No 184
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-42 Score=389.29 Aligned_cols=221 Identities=28% Similarity=0.486 Sum_probs=186.0
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCC----ChHH
Q 000909 992 IEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVREL----DVHW 1065 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 1065 (1230)
|+++||+++|++.+ ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 89999999996422 23699999999999999999999999999999999999999999999999999754 3467
Q ss_pred HhhcceEEcccc--cCCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhccccccc-cccCCCCCCChhHHHHHH
Q 000909 1066 YRKHTALVSQEP--VIYAGNIRDNIVFGKL--DASENEVVEAARAANAHEFISSLKDGYET-ECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1066 lR~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQrQrla 1140 (1230)
+|++|+||||+| .+|..|++||+.++.. +.+.++..+. +.+.++.+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 6888999999987632 2333333221 12233332 4543 234567889999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhh
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
|||||+.+|+||||||||++||+.+...+.+.++++. .|+|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 4899999999999985 579999999999999999999876
Q ss_pred cc
Q 000909 1218 MR 1219 (1230)
Q Consensus 1218 ~~ 1219 (1230)
+.
T Consensus 236 ~~ 237 (286)
T PRK13646 236 DK 237 (286)
T ss_pred CH
Confidence 53
No 185
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-42 Score=385.67 Aligned_cols=218 Identities=31% Similarity=0.489 Sum_probs=188.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4999999999963 359999999999999999999999999999999999975 589999999999875 345
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++|+||++.+|..|++||+.++.. .. .++++.++++.+++.+.+.. .......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHH
Confidence 678899999999999999999999986421 11 13456667777777554332 23455678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||+|++|++|+|++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999867899999999999986 4899999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
.+.
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 865
No 186
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-42 Score=388.07 Aligned_cols=219 Identities=28% Similarity=0.458 Sum_probs=191.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
-|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999888888889999
Q ss_pred eEEcccc--cCCcccHHHHhccCCC--CCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1071 ALVSQEP--VIYAGNIRDNIVFGKL--DASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1071 ~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
+|+||+| .++..|+.+||.++.. ..+++ .+.++++.+++.++... ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4778899999986521 23333 34566677777655432 3467999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhccc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRG 1220 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g 1220 (1230)
|||+++|+||||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||+|++|++|++++.|+++++++..+
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 232 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATSE 232 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHH
Confidence 999999999999999999999999999999998754 799999999999998899999999999999999999886543
No 187
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-42 Score=384.92 Aligned_cols=220 Identities=30% Similarity=0.496 Sum_probs=190.3
Q ss_pred cCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--C
Q 000909 989 SGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--L 1061 (1230)
Q Consensus 989 ~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i 1061 (1230)
.+.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 467999999999963 359999999999999999999999999999999999986 589999999999863 4
Q ss_pred ChHHHhhcceEEcccccCCcccHHHHhccCCC---CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChh
Q 000909 1062 DVHWYRKHTALVSQEPVIYAGNIRDNIVFGKL---DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGG 1134 (1230)
Q Consensus 1062 ~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~---~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1134 (1230)
+...+|++++|+||+|.+|..|+++|+.++.. ..+ +++++++++.+++.+.+. ....+...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 56678999999999999999999999986521 122 244666777777644332 2234566789999
Q ss_pred HHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHh
Q 000909 1135 QRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYA 1213 (1230)
Q Consensus 1135 QrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~ 1213 (1230)
||||++||||++++|+||||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778899999999999864 7999999999999999999
Q ss_pred HHhhc
Q 000909 1214 QLTHM 1218 (1230)
Q Consensus 1214 eLl~~ 1218 (1230)
++.+.
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 99865
No 188
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-42 Score=390.18 Aligned_cols=216 Identities=26% Similarity=0.465 Sum_probs=184.5
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC----CChHH
Q 000909 992 IEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE----LDVHW 1065 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~ 1065 (1230)
|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997321 1259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhhcceEEcccc--cCCcccHHHHhccCCC--CCCHH----HHHHHHHHhchH-HHHHhccccccccccCCCCCCChhHH
Q 000909 1066 YRKHTALVSQEP--VIYAGNIRDNIVFGKL--DASEN----EVVEAARAANAH-EFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1066 lR~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~----ei~~al~~a~l~-~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
+|++++||+|+| .+|..|+.+|+.++.. ..+.+ ++.++++..++. ++ ......+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF-----------WEKSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh-----------ccCCcccCCHHHH
Confidence 899999999998 7999999999987632 22333 244445555552 22 2345578999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQ 1214 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~e 1214 (1230)
||++|||||+.+|+||||||||++||+.+.+.+.+.++++. .++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998865 4899999999999885 589999999999999999999
Q ss_pred Hhhc
Q 000909 1215 LTHM 1218 (1230)
Q Consensus 1215 Ll~~ 1218 (1230)
+..+
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8754
No 189
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-42 Score=384.13 Aligned_cols=218 Identities=28% Similarity=0.459 Sum_probs=188.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 3599999999999999999999999999999999999997 48999999999863 345
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--C-C----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--D-A----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~-~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++|+||+|.+|+.|++||+.++.. . . .++.+.++++.+++.+.+ ++.+++ ...+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 678899999999999999999999987531 1 1 134456677777764433 233444 4568999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 799999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
.++
T Consensus 237 ~~~ 239 (254)
T PRK14273 237 FFN 239 (254)
T ss_pred HhC
Confidence 865
No 190
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-42 Score=382.47 Aligned_cols=213 Identities=33% Similarity=0.538 Sum_probs=183.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC---hHHHhh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD---VHWYRK 1068 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~lR~ 1068 (1230)
|+++||+++|++ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999963 146999999999999999999999999999999999999999999999999998876 466889
Q ss_pred cceEEcccccCCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCCh
Q 000909 1069 HTALVSQEPVIYA-GNIRDNIVFGKLD--------------ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSG 1133 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~-gTIreNl~~g~~~--------------~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1133 (1230)
+++|+||++.+|. .|+++|+.++... ..++++.++++..++.+ .....+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccCCH
Confidence 9999999998887 6999999864321 11223444455554433 23445678999
Q ss_pred hHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEec
Q 000909 1134 GQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERG 1210 (1230)
Q Consensus 1134 GQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~G 1210 (1230)
|||||++||||++++|+||||||||++||+.+...+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999874 3899999999999998 57999999999999999
Q ss_pred CHhHHhh
Q 000909 1211 TYAQLTH 1217 (1230)
Q Consensus 1211 t~~eLl~ 1217 (1230)
+++++.+
T Consensus 228 ~~~~~~~ 234 (241)
T cd03256 228 PPAELTD 234 (241)
T ss_pred CHHHhhH
Confidence 9999754
No 191
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-42 Score=377.87 Aligned_cols=203 Identities=31% Similarity=0.491 Sum_probs=175.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChH---HHhh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVH---WYRK 1068 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~ 1068 (1230)
|+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 23599999999999999999999999999999999999999999999999999876543 4788
Q ss_pred cceEEcccccCCc-ccHHHHhccCCC------CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1069 HTALVSQEPVIYA-GNIRDNIVFGKL------DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~-gTIreNl~~g~~------~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
+++|+||+|.+|. .|++||+.++.. ...++++.++++..++.++..+. ..+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHAL-----------PMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHH
Confidence 9999999999887 599999986421 11234567777777776654433 34799999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEE
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRV 1206 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~I 1206 (1230)
||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999864 47899999999999875 799999999985
No 192
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.8e-42 Score=382.65 Aligned_cols=217 Identities=31% Similarity=0.512 Sum_probs=187.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----CCeEEECCeecCCC--ChH
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE-----QGSVRVDGMDVREL--DVH 1064 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~i--~~~ 1064 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 35999999999999999999999999999999999999998 99999999999763 456
Q ss_pred HHhhcceEEcccccCCcccHHHHhccCCC--C-CC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1065 WYRKHTALVSQEPVIYAGNIRDNIVFGKL--D-AS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1065 ~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~-~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
.+|++++|+||++.+|..|++||+.++.. . .+ ++++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77899999999999999999999986421 1 12 234566677777653332 1223455689999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767999999999998865 7999999999999999999998
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
+.
T Consensus 232 ~~ 233 (247)
T TIGR00972 232 TN 233 (247)
T ss_pred hC
Confidence 65
No 193
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-42 Score=381.86 Aligned_cols=212 Identities=29% Similarity=0.446 Sum_probs=181.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999876653 367899
Q ss_pred EEcccccCCc-ccHHHHhccCCCC--C----C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1072 LVSQEPVIYA-GNIRDNIVFGKLD--A----S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1072 ~VpQdp~Lf~-gTIreNl~~g~~~--~----s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
||||+|.+|. .|++||+.++... . . .+++.++++..++.++. .....+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLA-----------DRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHH
Confidence 9999999986 5999999875321 1 1 12344555555554433 3344679999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhh
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998765 89999999999999999999986
Q ss_pred cc
Q 000909 1218 MR 1219 (1230)
Q Consensus 1218 ~~ 1219 (1230)
..
T Consensus 227 ~~ 228 (239)
T cd03296 227 HP 228 (239)
T ss_pred CC
Confidence 53
No 194
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2e-42 Score=377.31 Aligned_cols=211 Identities=25% Similarity=0.430 Sum_probs=181.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|++. ..++|+|+||++++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999642 146999999999999999999999999999999999999999999999999987643 66788999
Q ss_pred EEcccccCC-cccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIY-AGNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf-~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||+|.+| ..|+++|+.++.. ..+ ++++.++++..++.+.. + ....+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------N----KRARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------h----ChhhhCCHHHHHHHHHHHH
Confidence 999999998 5799999976421 112 23345555655554432 2 2345799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999998778999999999999875 799999999999999999875
No 195
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.6e-42 Score=397.81 Aligned_cols=201 Identities=26% Similarity=0.418 Sum_probs=178.9
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH----hhcceEEcccccCCc-
Q 000909 1007 ALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY----RKHTALVSQEPVIYA- 1081 (1230)
Q Consensus 1007 ~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~~i~~VpQdp~Lf~- 1081 (1230)
.++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+...+...+ |++++||||++.+|+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999998887 789999999999997
Q ss_pred ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEee
Q 000909 1082 GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLD 1155 (1230)
Q Consensus 1082 gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLD 1155 (1230)
.||+||+.++.. ..+ .+++.++++.+++.++..+ .+.+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~-----------~p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHR-----------YPDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhC-----------ChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999987532 122 3456677777777655443 44579999999999999999999999999
Q ss_pred cccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1156 EATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTI-KKLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1156 EaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||||+||+.+.+.+++.+.+.. .++|+|+|||+++.+ ..||+|++|++|++++.|+|++++++
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 9999999999999999998874 389999999999986 45899999999999999999999876
No 196
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-42 Score=397.34 Aligned_cols=214 Identities=29% Similarity=0.483 Sum_probs=188.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|+. +.++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+++.. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999942 24599999999999999999999999999999999999999999999999999988764 4789
Q ss_pred eEEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+||||++.+|. .|++||+.|+.. ..+ .+++.++++..++.++..+.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999998632 122 245667788888877765544 479999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++.++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 99999999999999999999999999999998754 789999999999775 58999999999999999999998763
No 197
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2e-42 Score=397.17 Aligned_cols=211 Identities=30% Similarity=0.471 Sum_probs=182.5
Q ss_pred CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH----hhheEEEccCccccch
Q 000909 370 SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV----RREMGLVSQEHALFGT 445 (1230)
Q Consensus 370 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~----r~~i~~v~Q~~~l~~~ 445 (1230)
+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++...+..++ |++|+||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 459999999999999999999999999999999999999999999999999999988777 7899999999999975
Q ss_pred -hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCC
Q 000909 446 -SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATS 522 (1230)
Q Consensus 446 -ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts 522 (1230)
||+|||.++... .+.++..+ .+.+.++.+ |++...++.+.+||||||||++|||||+.+|+|+|||||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~s 158 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFS 158 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 999999986432 11222211 223444444 77777888889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHHH
Q 000909 523 ALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHYA 587 (1230)
Q Consensus 523 ~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 587 (1230)
+||+.+.+.+++.+.++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++...|.
T Consensus 159 aLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 159 ALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 999999999999998764 38999999999998755 999999999999999999999875444443
No 198
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.3e-42 Score=398.03 Aligned_cols=213 Identities=28% Similarity=0.432 Sum_probs=186.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.++. ++++
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 3589999999999999999999999999999999999999999999999999887764 6789
Q ss_pred eEEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+||||++.+|. .|++||+.|+.. ..+ ++++.++++..++.++. .....+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSE-----------RKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchh-----------hCChhhCCHHHHHHHHHHH
Confidence 99999999996 699999998632 122 23455566666655443 3445689999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+. -||+|++|++|++++.|+|+++.++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999999998754 789999999999875 58999999999999999999999863
No 199
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.5e-41 Score=379.44 Aligned_cols=220 Identities=28% Similarity=0.474 Sum_probs=195.9
Q ss_pred ccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHh
Q 000909 988 ISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYR 1067 (1230)
Q Consensus 988 ~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 1067 (1230)
..+.|+++||+++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 34579999999952 3599999999999999999999999999999999999999999999998
Q ss_pred hcceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHcc
Q 000909 1068 KHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIR 1147 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~ 1147 (1230)
+++|+||++.+|++|+++|+.++.. ..+.++.++++.+++.+.+..+|.++++.+++.+.+||||||||++|||||++
T Consensus 99 -~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 -RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred -EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999987632 23445677788889999999999999999999999999999999999999999
Q ss_pred CCCEEEeecccCCcCHHHHHHHHHH-HHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcccccHHHh
Q 000909 1148 NPTILLLDEATSALDVQSEQVVQEA-LDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLA 1226 (1230)
Q Consensus 1148 ~p~ILlLDEaTSaLD~~te~~I~~~-l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~ 1226 (1230)
+|++|||||||++||+++...+.+. +++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+....|.+.+
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 256 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLRPDFSSKL 256 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcchHHHHHH
Confidence 9999999999999999999988775 455556899999999999999999999999999999999999987555555433
No 200
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.3e-42 Score=396.68 Aligned_cols=221 Identities=32% Similarity=0.517 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999973 3589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEccCccccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
|||+|++.+|+ .|++|||.|+... .+.++. ...+++.++.+ |++......+.+||||||||++|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~-----~~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEV-----AERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999996 5999999987432 122222 12344556666 78777888899999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHH
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHY 586 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 586 (1230)
+|+++|||||||+||+.+++.+.+.|++.. .|.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++...+
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 999999999999999999999999998764 38999999999999865 99999999999999999999987644333
No 201
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-42 Score=388.13 Aligned_cols=215 Identities=22% Similarity=0.434 Sum_probs=186.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecC--CCChHHHhh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVR--ELDVHWYRK 1068 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~~~~lR~ 1068 (1230)
-|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999962 245999999999999999999999999999999999999999999999999984 345667899
Q ss_pred cceEEcccc--cCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1069 HTALVSQEP--VIYAGNIRDNIVFGKL--DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1069 ~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
+++|+||+| .+|+.|++||+.++.. +.+. +.+.++++..++.++. .....+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHH
Confidence 999999998 5788999999986422 2232 3345556666665442 3456789999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhh
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
|||||+.+|+||||||||++||+++...+.+.|++..+ |+|+|++||+++.+. .||+|++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998753 899999999999987 589999999999999999999886
Q ss_pred c
Q 000909 1218 M 1218 (1230)
Q Consensus 1218 ~ 1218 (1230)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 4
No 202
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-42 Score=385.98 Aligned_cols=221 Identities=30% Similarity=0.496 Sum_probs=189.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
-|+++||+++|++...+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743224599999999999999999999999999999999999999999999999999887887888999
Q ss_pred EEEccCcc--ccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 434 GLVSQEHA--LFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 434 ~~v~Q~~~--l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
+||+|+|. ++..||+|||.++... .+.++..+ .+.+.++.+ |++........+||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qrv~lAral~ 156 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKE-----RVNEALELV--GMQDFKEREPARLSGGQKQRVAIAGAVA 156 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999984 5567999999987432 22222211 122334444 6666677778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhh
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
.+|++|||||||++||+.+.+.+.+.++++. .|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 157 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 157 MRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999999999999999999999998864 38999999999999978999999999999999999988653
No 203
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-42 Score=378.55 Aligned_cols=216 Identities=32% Similarity=0.489 Sum_probs=184.6
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChH---HHh
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVH---WYR 1067 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1067 (1230)
|+++|++++|+++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431 12699999999999999999999999999999999999999999999999999877654 357
Q ss_pred hcceEEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1068 KHTALVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
++++|+||+|.+|. .|++||+.++.. ..+ .+++.++++..++.+... ....+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKAD-----------AYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-----------cChhhCCHHHHHHHH
Confidence 89999999999997 699999976421 112 234555666666654433 344679999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhh
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
||||++++|++|||||||++||+.+...+.+.|++.. .++|+|++||+++.+.. ||++++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999875 38899999999999875 79999999999999999999875
Q ss_pred c
Q 000909 1218 M 1218 (1230)
Q Consensus 1218 ~ 1218 (1230)
.
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 3
No 204
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-42 Score=390.20 Aligned_cols=217 Identities=25% Similarity=0.431 Sum_probs=184.3
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC----CChHH
Q 000909 992 IEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE----LDVHW 1065 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~ 1065 (1230)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 89999999996421 1369999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhhcceEEcccc--cCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1066 YRKHTALVSQEP--VIYAGNIRDNIVFGKL--DASENE----VVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1066 lR~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
.|++++||||+| .+|+.|++||+.++.. ..+.++ +.++++.+++.+. ........|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEE----------LLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChh----------hhhCCcccCCHHHHH
Confidence 888999999998 6888999999987632 223332 3445555555321 123445689999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhH
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQ 1214 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~e 1214 (1230)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ |.|||+|||+++.+. .||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 789999999999986 589999999999999999999
Q ss_pred Hhhc
Q 000909 1215 LTHM 1218 (1230)
Q Consensus 1215 Ll~~ 1218 (1230)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8754
No 205
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-42 Score=395.75 Aligned_cols=225 Identities=34% Similarity=0.521 Sum_probs=191.2
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH---Hh
Q 000909 355 IEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW---VR 430 (1230)
Q Consensus 355 i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~---~r 430 (1230)
|+++|++|+|+... ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997311 346999999999999999999999999999999999999999999999999998876543 47
Q ss_pred hheEEEccCccccc-hhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 431 REMGLVSQEHALFG-TSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~-~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
++||||+|++.+|. .|++||+.++.. ..+.++.. ..+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIK-----ARVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 88999999999986 599999987532 11222221 1234456666 77777778888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCc
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDG 584 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 584 (1230)
|+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...+..
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~ 234 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKH 234 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCc
Confidence 999999999999999999999999999999864 38999999999999876 999999999999999999999764333
Q ss_pred HH
Q 000909 585 HY 586 (1230)
Q Consensus 585 ~~ 586 (1230)
.+
T Consensus 235 ~~ 236 (343)
T PRK11153 235 PL 236 (343)
T ss_pred HH
Confidence 33
No 206
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.2e-42 Score=380.81 Aligned_cols=213 Identities=29% Similarity=0.497 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh---HHHhh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV---HWYRK 1068 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1068 (1230)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 789999999961 2459999999999999999999999999999999999999999999999999987764 44788
Q ss_pred cceEEcccccCCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCCh
Q 000909 1069 HTALVSQEPVIYA-GNIRDNIVFGKLD--------------ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSG 1133 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~-gTIreNl~~g~~~--------------~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1133 (1230)
+++|+||++.+|. .|+++|+.++... ..++++.++++..++.++ ......+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCH
Confidence 9999999998886 5999999865321 012234455555555433 3345668999
Q ss_pred hHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEec
Q 000909 1134 GQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERG 1210 (1230)
Q Consensus 1134 GQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~G 1210 (1230)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999874 3789999999999985 48999999999999999
Q ss_pred CHhHHhh
Q 000909 1211 TYAQLTH 1217 (1230)
Q Consensus 1211 t~~eLl~ 1217 (1230)
+++++.+
T Consensus 229 ~~~~~~~ 235 (243)
T TIGR02315 229 APSELDD 235 (243)
T ss_pred CHHHhCh
Confidence 9998743
No 207
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.4e-42 Score=379.78 Aligned_cols=221 Identities=28% Similarity=0.449 Sum_probs=188.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH-hhhe
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV-RREM 433 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~-r~~i 433 (1230)
++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 359999999999999999999999999999999999999999999999999988776554 5679
Q ss_pred EEEccCccccch-hHHHHHhcCCCCCCHHHH-------HHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLDATMDEV-------IAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
+|++|++.+|++ |++||+.++........+ ........+.+.++.+ |++...+....+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999986 999999876421110000 0011122345566666 787778888899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
||++.+|+++||||||++||+.+.+.+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999999999999999999998764 68999999999999866 99999999999999999988864
No 208
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.9e-42 Score=375.76 Aligned_cols=217 Identities=27% Similarity=0.413 Sum_probs=180.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH-hhcc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY-RKHT 1070 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 1070 (1230)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 359999999999999999999999999999999999999999999999999988877654 6779
Q ss_pred eEEcccccCCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNP 1149 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p 1149 (1230)
+|+||++.+|.+ |+++|+.++.......+..+.+ .+.++.++ +++.........||||||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARL-----ERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHH-----HHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999998764322111111111 11122221 1223334556689999999999999999999
Q ss_pred CEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhh
Q 000909 1150 TILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1150 ~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
++|||||||++||+++...+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999875 57899999999998765 79999999999999999988764
No 209
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.8e-42 Score=399.45 Aligned_cols=214 Identities=29% Similarity=0.475 Sum_probs=191.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+++...+|+++
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 3899999999963 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEcccccC-CcccHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1071 ALVSQEPVI-YAGNIRDNIVFGKLD----------ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1071 ~~VpQdp~L-f~gTIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
+||||++.+ |+.|++||+.++... .+.+.+.++++.+++.++.++ ...+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 999999987 678999999876421 123457788888888766532 3457999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTH 1217 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~ 1217 (1230)
+|||||+++|+||||||||++||+.+...+.+.|+++. +++|+|+++|+++.+. .||||++|++|++++.|+|++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999875 4889999999999995 589999999999999999999875
Q ss_pred c
Q 000909 1218 M 1218 (1230)
Q Consensus 1218 ~ 1218 (1230)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 4
No 210
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-42 Score=379.54 Aligned_cols=218 Identities=33% Similarity=0.503 Sum_probs=185.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC---CCCceEEECCeecCCCCHHHHh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD---ADDGIVRIDGVDIRRLQLKWVR 430 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~i~~~~~~~~r 430 (1230)
.|+++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.+.+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999973 359999999999999999999999999999999999985 6999999999999888877888
Q ss_pred hheEEEccCccccchhHHHHHhcCCCC--C--CHHHHHHHHHHHhHHHHHHhCCCcc----cchhcCCCCCCChhHHHHH
Q 000909 431 REMGLVSQEHALFGTSIKDNIMFGKLD--A--TMDEVIAAATAANAHNFIRQLPEGY----ETKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~--~~~~~~~~~~~~~~~~~i~~l~~g~----~t~~~~~g~~LSgGqkqri 502 (1230)
+.++|++|++.+|+.|++||+.++... . ..++. ...+.+.++.+ |+ .+...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEE-----EALVVDCLQKV--GLFEEVKDKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHH-----HHHHHHHHHHc--CCChhhhHHhcCCcccCCHHHHHHH
Confidence 999999999999999999999875311 0 00111 11122233333 33 2446777889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+||||++++|+++||||||++||+.+...+.+.|.+..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999987678999999999998865 999999999999999999998764
No 211
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-42 Score=387.04 Aligned_cols=218 Identities=28% Similarity=0.454 Sum_probs=190.0
Q ss_pred cEEEEEEEEECCCCC---CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC-hHHH
Q 000909 991 KIEMRRVDFAYPSRP---DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD-VHWY 1066 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~---~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~l 1066 (1230)
-|+++||+++|++.. ++++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hhcceEEccccc--CCcccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1067 RKHTALVSQEPV--IYAGNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1067 R~~i~~VpQdp~--Lf~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
|++++|+||+|. +|..|+.+|+.++.. ..+ ++++.++++.+++.++..+. ..+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHA-----------PHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHH
Confidence 899999999984 777799999987521 122 34567777777887765543 35799999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHh
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 389999999999999889999999999999999999997
Q ss_pred hcc
Q 000909 1217 HMR 1219 (1230)
Q Consensus 1217 ~~~ 1219 (1230)
.+.
T Consensus 233 ~~~ 235 (280)
T PRK13633 233 KEV 235 (280)
T ss_pred cCh
Confidence 653
No 212
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.1e-42 Score=377.62 Aligned_cols=214 Identities=36% Similarity=0.532 Sum_probs=180.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC-----CCCCceEEECCeecCCCC--HH
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFY-----DADDGIVRIDGVDIRRLQ--LK 427 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~-----~~~~G~i~~~g~~i~~~~--~~ 427 (1230)
|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 35999999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhhheEEEccCccccchhHHHHHhcCCCCC--CH-HHHHHHHHHHhHHHHHHhCCCcccchhcCC--CCCCChhHHHHH
Q 000909 428 WVRREMGLVSQEHALFGTSIKDNIMFGKLDA--TM-DEVIAAATAANAHNFIRQLPEGYETKVGER--GALLSGGQKQRI 502 (1230)
Q Consensus 428 ~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~--~~-~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~--g~~LSgGqkqri 502 (1230)
.++++++|++|++.+|+.|++||+.++.... .. ++.. ..+.+.++.+ |++...... +.+||||||||+
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~LSgG~~qrv 150 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELD-----ERVEEALRKA--ALWDEVKDRLHALGLSGGQQQRL 150 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHH-----HHHHHHHHHc--CCChHHhccCCcccCCHHHHHHH
Confidence 6788999999999999779999998753211 11 1111 1122334444 555444444 589999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
+||||++.+|+++||||||++||+.++..+.+.|++..+.+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 151 CLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999999987545899999999999865 999999999999999987653
No 213
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-41 Score=384.81 Aligned_cols=219 Identities=31% Similarity=0.495 Sum_probs=186.6
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCC--HHHHh
Q 000909 355 IEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQ--LKWVR 430 (1230)
Q Consensus 355 i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~--~~~~r 430 (1230)
|+++||+++|+... .+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 146999999999999999999999999999999999999999999999999998754 45678
Q ss_pred hheEEEccCc--cccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCccc--chhcCCCCCCChhHHHHHHH
Q 000909 431 REMGLVSQEH--ALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYE--TKVGERGALLSGGQKQRIAI 504 (1230)
Q Consensus 431 ~~i~~v~Q~~--~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~--t~~~~~g~~LSgGqkqri~i 504 (1230)
++||||||+| .+|+.|++|||.++.. ..+.++..+. +.+.++.+ |++ +.....+.+||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 5788899999998632 1233332222 22334444 664 55678889999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-ccCEEEEEeCCeEEEecChhHHHh
Q 000909 505 ARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVR-NADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 505 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
||||+.+|++|||||||++||+.+...+.+.++++. .|+|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999999998864 3899999999999985 599999999999999999999865
No 214
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-42 Score=383.58 Aligned_cols=221 Identities=31% Similarity=0.473 Sum_probs=190.7
Q ss_pred ccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCC--
Q 000909 988 ISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRE-- 1060 (1230)
Q Consensus 988 ~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~-- 1060 (1230)
..+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++..
T Consensus 16 ~~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 16 TEIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CCceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 3467999999999963 3599999999999999999999999999999999999975 89999999999975
Q ss_pred CChHHHhhcceEEcccccCCcccHHHHhccCCC--CC--C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCC
Q 000909 1061 LDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA--S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLS 1132 (1230)
Q Consensus 1061 i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~--s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1132 (1230)
.+...+|++++|+||+|.+|..|++||+.++.. +. + ++++.++++..++.+++.. .....+.+||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS 165 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLS 165 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCC
Confidence 356678899999999999999999999986421 11 1 2345677777777554321 2234567899
Q ss_pred hhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecC
Q 000909 1133 GGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1133 gGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1211 (1230)
||||||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 166 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 166 GGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999988778899999999999965 79999999999999999
Q ss_pred HhHHhhc
Q 000909 1212 YAQLTHM 1218 (1230)
Q Consensus 1212 ~~eLl~~ 1218 (1230)
+++++..
T Consensus 246 ~~~~~~~ 252 (267)
T PRK14235 246 TEKMFTN 252 (267)
T ss_pred HHHHHhC
Confidence 9999854
No 215
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=375.72 Aligned_cols=223 Identities=34% Similarity=0.563 Sum_probs=190.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999887777888899
Q ss_pred EEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 434 GLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 434 ~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
+|++|++.+|+.|++||+.++....... ...+.+.++.+ |++ ........+||||||||++||||++++|
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~-------~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEK-------NVDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcH-------HHHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999998764211111 11223445554 564 3456778899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHHHH
Q 000909 513 VILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHYAK 588 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 588 (1230)
+++||||||++||+.+.+.+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.......|..
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 9999999999999999999999998864 38999999999999875 9999999999999999999987643333443
No 216
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-42 Score=374.73 Aligned_cols=203 Identities=34% Similarity=0.570 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++++.+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999986543 577899
Q ss_pred EEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||+|.+|. .|++||+.++.. ..+ ++++.++++..++.++.. ....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLN-----------RYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHHHHHH
Confidence 9999998886 599999986522 111 234555666666654433 3345799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
|+++|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999864 38899999999998765 7999999999999876
No 217
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-42 Score=382.91 Aligned_cols=219 Identities=28% Similarity=0.429 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecC--CCCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVR--ELDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~--~i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999997 4566
Q ss_pred HHHhhcceEEcccccCCcc-cHHHHhccCCC--C--CC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChh
Q 000909 1064 HWYRKHTALVSQEPVIYAG-NIRDNIVFGKL--D--AS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGG 1134 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~g-TIreNl~~g~~--~--~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1134 (1230)
..+|++++|+||+|.+|.+ |++||+.++.. . .+ ++++.++++..++.+.+.. .......+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD-------RLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh-------hhccChhhCCHH
Confidence 6788999999999999976 99999986421 1 11 2345566666665443321 234456789999
Q ss_pred HHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHh
Q 000909 1135 QRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYA 1213 (1230)
Q Consensus 1135 QrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~ 1213 (1230)
||||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 8999999999999999999
Q ss_pred HHhhcc
Q 000909 1214 QLTHMR 1219 (1230)
Q Consensus 1214 eLl~~~ 1219 (1230)
++++.+
T Consensus 234 ~~~~~~ 239 (253)
T PRK14267 234 KVFENP 239 (253)
T ss_pred HHHhCC
Confidence 998653
No 218
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5e-42 Score=395.24 Aligned_cols=213 Identities=29% Similarity=0.456 Sum_probs=185.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|++||.|+.+.+. .|+++
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3889999999963 359999999999999999999999999999999999999999999999999987654 46789
Q ss_pred eEEcccccCCc-ccHHHHhccCCC------CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1071 ALVSQEPVIYA-GNIRDNIVFGKL------DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1071 ~~VpQdp~Lf~-gTIreNl~~g~~------~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
+||||++.+|. .|++||+.++.. ..+ ++++.++++..++.++.++ ....||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADR-----------YPAQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHH
Confidence 99999999997 499999998632 122 2345566677766554433 3457999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
+|||||+++|++||||||||+||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+|+++.
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998754 7899999999998765 7999999999999999999998
Q ss_pred hcc
Q 000909 1217 HMR 1219 (1230)
Q Consensus 1217 ~~~ 1219 (1230)
+++
T Consensus 226 ~~p 228 (353)
T PRK10851 226 REP 228 (353)
T ss_pred hCc
Confidence 763
No 219
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-42 Score=386.21 Aligned_cols=212 Identities=29% Similarity=0.446 Sum_probs=181.9
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH----hh
Q 000909 993 EMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY----RK 1068 (1230)
Q Consensus 993 ~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~ 1068 (1230)
.++||+++|. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+ ++
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4567777775 3358999999999999999999999999999999999999999999999999988776543 46
Q ss_pred cceEEcccccCCc-ccHHHHhccCCC--CC----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1069 HTALVSQEPVIYA-GNIRDNIVFGKL--DA----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~-gTIreNl~~g~~--~~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
+++|+||++.+|. .|++||+.++.. .. .++++.++++..++.+++...| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 8999999999885 699999986421 11 1244666777777766654433 4799999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
|||++++|+||||||||++||+.+.+.+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999874 37999999999998864 799999999999999999999865
No 220
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-42 Score=385.79 Aligned_cols=219 Identities=29% Similarity=0.482 Sum_probs=186.1
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC----CCHHH
Q 000909 355 IEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR----LQLKW 428 (1230)
Q Consensus 355 i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~----~~~~~ 428 (1230)
|+++||+|+|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997421 1359999999999999999999999999999999999999999999999999863 33567
Q ss_pred HhhheEEEccCc--cccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHHHHHH
Q 000909 429 VRREMGLVSQEH--ALFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQKQRIA 503 (1230)
Q Consensus 429 ~r~~i~~v~Q~~--~l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~ 503 (1230)
+|+.+|||+|+| .+|+.|+.||+.|+... .+.++..+ .+.+.++.+ |++ ....+...+||||||||++
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrva 154 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVA 154 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHH
Confidence 888999999998 78889999999987432 22222221 123344444 664 3457788899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-ccCEEEEEeCCeEEEecChhHHHh
Q 000909 504 IARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVR-NADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 504 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|||||+.+|+++||||||++||+.+...+.+.++++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 155 iA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 155 IAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 9999999999999999999999999999999998764 5899999999999985 499999999999999999999865
No 221
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.3e-42 Score=367.56 Aligned_cols=200 Identities=36% Similarity=0.576 Sum_probs=181.8
Q ss_pred EEEEEEEEECCCCCC--cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhc
Q 000909 992 IEMRRVDFAYPSRPD--ALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKH 1069 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~--~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1069 (1230)
|+++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999964311 3699999999999999999999999999999999999999999999999 6
Q ss_pred ceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000909 1070 TALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNP 1149 (1230)
Q Consensus 1070 i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p 1149 (1230)
++|+||+|.+|++|++||+.++. ..++++.+++++.+++.+++..+|.|+++.+++.+.+||+|||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGK-PFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCC-CcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999864 34566788888999999999999999999999999999999999999999999999
Q ss_pred CEEEeecccCCcCHHHHHHHHH-HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCcE
Q 000909 1150 TILLLDEATSALDVQSEQVVQE-ALDRIM-MGRTTIVVAHRLNTIKKLDSIALVADGR 1205 (1230)
Q Consensus 1150 ~ILlLDEaTSaLD~~te~~I~~-~l~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~ 1205 (1230)
+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||+|++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 566553 4789999999999999999999999985
No 222
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1e-41 Score=392.62 Aligned_cols=221 Identities=33% Similarity=0.489 Sum_probs=188.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+. .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3789999999963 359999999999999999999999999999999999999999999999999987654 35689
Q ss_pred EEEccCccccch-hHHHHHhcCCCC------CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLD------ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
+||+|++.+|+. |++||+.|+... .+.++.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalAr 149 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIK-----AKVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALAR 149 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 999999999975 999999987431 1222211 1233445555 6666677888899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcC
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRID 583 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 583 (1230)
||+.+|++||||||||+||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 150 AL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~ 229 (353)
T PRK10851 150 ALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPA 229 (353)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999988643 7899999999999866 99999999999999999999987544
Q ss_pred cHH
Q 000909 584 GHY 586 (1230)
Q Consensus 584 ~~~ 586 (1230)
..|
T Consensus 230 ~~~ 232 (353)
T PRK10851 230 TRF 232 (353)
T ss_pred chH
Confidence 333
No 223
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-42 Score=386.91 Aligned_cols=216 Identities=22% Similarity=0.412 Sum_probs=183.4
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC---------
Q 000909 992 IEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE--------- 1060 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--------- 1060 (1230)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 89999999997432 1359999999999999999999999999999999999999999999999987632
Q ss_pred ---------------CChHHHhhcceEEcccc--cCCcccHHHHhccCCC--CCCHH----HHHHHHHHhchH-HHHHhc
Q 000909 1061 ---------------LDVHWYRKHTALVSQEP--VIYAGNIRDNIVFGKL--DASEN----EVVEAARAANAH-EFISSL 1116 (1230)
Q Consensus 1061 ---------------i~~~~lR~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~----ei~~al~~a~l~-~~i~~l 1116 (1230)
.+...+|++++||||+| .+|..|++|||.++.. +.+.+ ++.++++.+++. ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~---- 158 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY---- 158 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----
Confidence 13467889999999986 6888999999987632 23333 345555555553 22
Q ss_pred cccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-h
Q 000909 1117 KDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-K 1194 (1230)
Q Consensus 1117 p~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~ 1194 (1230)
......+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+. .
T Consensus 159 -------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 159 -------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 234567899999999999999999999999999999999999999999998874 4899999999999875 5
Q ss_pred cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1195 LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1195 ~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||||++|++|++++.|+++++.++
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 899999999999999999998765
No 224
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-42 Score=384.12 Aligned_cols=215 Identities=28% Similarity=0.451 Sum_probs=188.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
++++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998878888899999
Q ss_pred EEcccc--cCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1072 LVSQEP--VIYAGNIRDNIVFGKL--DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1072 ~VpQdp--~Lf~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
||||+| .+|+.|+++|+.++.. ..+. +.+.++++..++.++..+ ....||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDR-----------VPHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcC-----------CcccCCHHHHHHHHHHH
Confidence 999998 4788899999986431 2222 345666777777665443 34579999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
||+.+|++|||||||++||+.+.+.+.+.+++..+ ++|+|++||+++.+. .||||++|++|++++.|+++++++..
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~~ 229 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQP 229 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcCH
Confidence 99999999999999999999999999999998753 789999999999985 68999999999999999999998653
No 225
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-42 Score=383.08 Aligned_cols=217 Identities=24% Similarity=0.521 Sum_probs=188.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++|++++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999632 34699999999999999999999999999999999999999999999999999888888899999
Q ss_pred eEEcccc--cCCcccHHHHhccCCC--CCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1071 ALVSQEP--VIYAGNIRDNIVFGKL--DASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1071 ~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
+|+||+| .++..|++||+.++.. ..+.+ .+.++++..++.++.. ....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLD-----------KEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 4567899999987521 12333 2445566666655543 34468999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+..
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 233 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNNK 233 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcCH
Confidence 999999999999999999999999999999998753 48999999999999889999999999999999999887643
No 226
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-42 Score=376.48 Aligned_cols=210 Identities=26% Similarity=0.406 Sum_probs=178.9
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH---H
Q 000909 991 KIEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW---Y 1066 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---l 1066 (1230)
-++++||+++|+++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997422 146999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-hcceEEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1067 R-KHTALVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1067 R-~~i~~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
| ++++|+||+|.+|.. |++||+.++.. ..+ ++++.++++..++.++ ......+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 3 679999999998875 99999976311 112 2334555555555433 334456899999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCcEEEEecC
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKKLDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt 1211 (1230)
++||||++.+|+||||||||++||+++...+.+.|++.. +|+|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4899999999999999999999999999998775
No 227
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=383.45 Aligned_cols=217 Identities=26% Similarity=0.475 Sum_probs=190.3
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCC---CeEEECCeecCCCChHHH
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ---GSVRVDGMDVRELDVHWY 1066 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~---G~I~idG~di~~i~~~~l 1066 (1230)
+.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 359999999999642 2359999999999999999999999999999999999999987 899999999988887788
Q ss_pred hhcceEEcccc--cCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1067 RKHTALVSQEP--VIYAGNIRDNIVFGKL--DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1067 R~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
|++++|+||+| .+++.|++|||.++.. ..+. +++.++++..++.++.... ..+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSE-----------PANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHH
Confidence 99999999998 4678899999987532 2333 3356677777776654433 35899999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHh
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|++++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998753 78999999999999889999999999999999999887
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
..
T Consensus 232 ~~ 233 (282)
T PRK13640 232 SK 233 (282)
T ss_pred cC
Confidence 53
No 228
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.6e-41 Score=376.45 Aligned_cols=217 Identities=32% Similarity=0.464 Sum_probs=185.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CceEEECCeecCCC--CHH
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDAD-----DGIVRIDGVDIRRL--QLK 427 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~i~~~--~~~ 427 (1230)
|+++||+++|++ ..+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999973 35999999999999999999999999999999999999998 99999999998763 355
Q ss_pred HHhhheEEEccCccccchhHHHHHhcCCCC---CCHHHHHHHHHHHhHHHHHHhCCCccc----chhcCCCCCCChhHHH
Q 000909 428 WVRREMGLVSQEHALFGTSIKDNIMFGKLD---ATMDEVIAAATAANAHNFIRQLPEGYE----TKVGERGALLSGGQKQ 500 (1230)
Q Consensus 428 ~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~----t~~~~~g~~LSgGqkq 500 (1230)
.+++.++|+||++.+|+.|++||+.++... .+.++..+ .+.+.++.+ |+. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKA--ALWDEVKDRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHc--CCCcchhhHhhCCcccCCHHHHH
Confidence 678899999999999999999999875311 11122111 123334444 554 5567788899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHH
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLI 579 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 579 (1230)
|++||||++.+|+++||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999987
Q ss_pred hh
Q 000909 580 NR 581 (1230)
Q Consensus 580 ~~ 581 (1230)
..
T Consensus 232 ~~ 233 (247)
T TIGR00972 232 TN 233 (247)
T ss_pred hC
Confidence 64
No 229
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=9.4e-42 Score=394.45 Aligned_cols=213 Identities=32% Similarity=0.530 Sum_probs=188.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++|++++|++ .++|+|+||++++||.++|+||||||||||+++|+|+++|++|+|.+||.++.+.+.. ++++
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 3599999999999999999999999999999999999999999999999999887764 5789
Q ss_pred eEEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+||+|++.+|.. ||+|||.|+.. ..+ ++++.++++..++.++.++.| .+||||||||+||||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 99999998632 122 235667777778877665544 479999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|+|++.|+|+++.++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999998754 789999999999875 58999999999999999999998763
No 230
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.7e-42 Score=376.37 Aligned_cols=216 Identities=30% Similarity=0.517 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998776544 46899
Q ss_pred EEcccccC-CcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccC
Q 000909 1072 LVSQEPVI-YAGNIRDNIVFGKL--DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRN 1148 (1230)
Q Consensus 1072 ~VpQdp~L-f~gTIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~ 1148 (1230)
|+||++.+ +..|+++|+.++.. +.+.++..+ .+.++++.+ |++........+||||||||++||||++++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 56799999976421 122221111 112333332 444444556678999999999999999999
Q ss_pred CCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1149 PTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1149 p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
|+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 48999999999999988999999999999999999999875
No 231
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-42 Score=379.98 Aligned_cols=218 Identities=29% Similarity=0.418 Sum_probs=188.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCCCChHH
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRELDVHW 1065 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~~~~ 1065 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 3599999999999999999999999999999999999974 6999999999999888888
Q ss_pred HhhcceEEcccccCC-cccHHHHhccCCC--C--CC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1066 YRKHTALVSQEPVIY-AGNIRDNIVFGKL--D--AS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1066 lR~~i~~VpQdp~Lf-~gTIreNl~~g~~--~--~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
+|++++|+||+|.+| +.|++||+.++.. . .. ++++.++++..++.+.+.. .++ ....+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKD---RLD----APAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhh---hhc----CCcccCCHHHH
Confidence 999999999999755 6799999976421 1 11 2456677777776543321 223 34567999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 5899999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14247 233 FTN 235 (250)
T ss_pred HcC
Confidence 865
No 232
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-41 Score=381.52 Aligned_cols=219 Identities=28% Similarity=0.413 Sum_probs=189.7
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--CC
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--LD 1062 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1062 (1230)
..|+++||+++|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 46999999999963 469999999999999999999999999999999999997 579999999999864 34
Q ss_pred hHHHhhcceEEcccccCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhH
Q 000909 1063 VHWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQ 1135 (1230)
Q Consensus 1063 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1135 (1230)
...+|+.++||||+|.+|..|++||+.++.. .. + ++++.++++..++.+++. +..+..+..|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 6678899999999999999999999987521 11 1 234556677777654442 23456677899999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhH
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQ 1214 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1214 (1230)
|||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999998854 89999999999999999999
Q ss_pred Hhhc
Q 000909 1215 LTHM 1218 (1230)
Q Consensus 1215 Ll~~ 1218 (1230)
+.+.
T Consensus 249 ~~~~ 252 (267)
T PRK14237 249 IFTN 252 (267)
T ss_pred HhcC
Confidence 9865
No 233
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-41 Score=383.06 Aligned_cols=219 Identities=29% Similarity=0.481 Sum_probs=186.2
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC----CCHHH
Q 000909 355 IEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR----LQLKW 428 (1230)
Q Consensus 355 i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~----~~~~~ 428 (1230)
|+++|++|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997421 1459999999999999999999999999999999999999999999999999863 34556
Q ss_pred HhhheEEEccCc--cccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHHHHHH
Q 000909 429 VRREMGLVSQEH--ALFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQKQRIA 503 (1230)
Q Consensus 429 ~r~~i~~v~Q~~--~l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~ 503 (1230)
+++.||||+|+| .+|+.|++|||.++... .+.++..+ .+.+.++.+ |++ ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 68888999999987422 22332222 123445555 665 3457778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 504 IARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 504 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|||||+.+|++|||||||++||+.+...+.+.++++. .|.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999999999998864 38999999999999865 99999999999999999998865
No 234
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6.8e-42 Score=394.35 Aligned_cols=214 Identities=30% Similarity=0.482 Sum_probs=186.7
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCC--CeEEECCeecCCCChHHHh
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ--GSVRVDGMDVRELDVHWYR 1067 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~--G~I~idG~di~~i~~~~lR 1067 (1230)
|.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++.+.+. .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 67999999999963 359999999999999999999999999999999999999999 999999999987765 36
Q ss_pred hcceEEcccccCCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1068 KHTALVSQEPVIYAG-NIRDNIVFGKL--DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~g-TIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
++++||+|++.+|.. |++|||.|+.. ..+. +++.++++..++.++..+ ...+||||||||+|
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~-----------~~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAH-----------LPAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhC-----------ChhhCCHHHHHHHH
Confidence 789999999999975 99999987532 2232 345556666666555443 34589999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC---CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHh
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM---GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~---~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
|||||+++|++||||||||+||+.+...+.+.|++..+ |.|+|+|||+++.+. .||+|+||++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999988654 689999999999875 58999999999999999999998
Q ss_pred hcc
Q 000909 1217 HMR 1219 (1230)
Q Consensus 1217 ~~~ 1219 (1230)
++.
T Consensus 228 ~~p 230 (362)
T TIGR03258 228 DAP 230 (362)
T ss_pred hCc
Confidence 763
No 235
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.1e-41 Score=392.68 Aligned_cols=222 Identities=31% Similarity=0.470 Sum_probs=190.8
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC--ceEEECCeecCCCCHHHH
Q 000909 352 RGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADD--GIVRIDGVDIRRLQLKWV 429 (1230)
Q Consensus 352 ~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~--G~i~~~g~~i~~~~~~~~ 429 (1230)
.+.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.+. .
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 367999999999963 359999999999999999999999999999999999999999 999999999987665 3
Q ss_pred hhheEEEccCccccch-hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 430 RREMGLVSQEHALFGT-SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 430 r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
++.|+||+|++.+|+. ||+|||.|+... .+.++..+ .+.+.++.+ |++........+||||||||++|||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIAR 150 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHH
Confidence 5689999999999976 999999986421 12222221 233445555 7777778888999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC---CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhc
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQASL---GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRI 582 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~---~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 582 (1230)
||+.+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p 230 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAP 230 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999987643 7899999999999865 9999999999999999999998754
Q ss_pred CcH
Q 000909 583 DGH 585 (1230)
Q Consensus 583 ~~~ 585 (1230)
...
T Consensus 231 ~~~ 233 (362)
T TIGR03258 231 ADG 233 (362)
T ss_pred CcH
Confidence 333
No 236
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=383.88 Aligned_cols=221 Identities=31% Similarity=0.532 Sum_probs=188.8
Q ss_pred cEEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCC----CHH
Q 000909 354 EIEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRL----QLK 427 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~----~~~ 427 (1230)
.|+++||+|+|++.. .+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996422 23699999999999999999999999999999999999999999999999999653 345
Q ss_pred HHhhheEEEccCc--cccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccc-hhcCCCCCCChhHHHHH
Q 000909 428 WVRREMGLVSQEH--ALFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYET-KVGERGALLSGGQKQRI 502 (1230)
Q Consensus 428 ~~r~~i~~v~Q~~--~l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~~LSgGqkqri 502 (1230)
.+|++||||+|+| .+|+.|++|||.++... .+.++..+ .+.+.++.+ |+++ .....+.+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKN-----YAHRLLMDL--GFSRDVMSQSPFQMSGGQMRKI 154 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccCCHHHHHHH
Confidence 6888999999997 58888999999986422 22223222 233456665 8874 56778899999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-ccCEEEEEeCCeEEEecChhHHH
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVR-NADLIAVVDNGCLVEIGTHNDLI 579 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 579 (1230)
+|||||+.+|+++||||||++||+.+...+.+.++++. .|+|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999864 4899999999999985 59999999999999999999987
Q ss_pred hh
Q 000909 580 NR 581 (1230)
Q Consensus 580 ~~ 581 (1230)
+.
T Consensus 235 ~~ 236 (286)
T PRK13646 235 KD 236 (286)
T ss_pred hC
Confidence 63
No 237
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=382.10 Aligned_cols=220 Identities=31% Similarity=0.499 Sum_probs=190.3
Q ss_pred cCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCC--C
Q 000909 989 SGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRE--L 1061 (1230)
Q Consensus 989 ~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i 1061 (1230)
.+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 456999999999963 3599999999999999999999999999999999999984 89999999999875 4
Q ss_pred ChHHHhhcceEEcccccCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChh
Q 000909 1062 DVHWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGG 1134 (1230)
Q Consensus 1062 ~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1134 (1230)
+...+|++++|+||++.+|++|++||+.++.. .. . ++++.++++.+++.+.+.. ..+..+..||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHH
Confidence 45678999999999999999999999986421 11 1 2346666777776554332 334567789999
Q ss_pred HHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHh
Q 000909 1135 QRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYA 1213 (1230)
Q Consensus 1135 QrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~ 1213 (1230)
||||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 99999999999999999999999999999999999999999877899999999999986 48999999999999999999
Q ss_pred HHhhc
Q 000909 1214 QLTHM 1218 (1230)
Q Consensus 1214 eLl~~ 1218 (1230)
++.+.
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 99865
No 238
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-42 Score=369.65 Aligned_cols=203 Identities=25% Similarity=0.455 Sum_probs=177.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|++ .++|+|+||++++| ++||+||||||||||+++|.|+++|++|+|.++|.++.+.+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 579999999963 36999999999999 99999999999999999999999999999999999998777 77899999
Q ss_pred EEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||+|.+|.+ |++||+.+... +.+ ++++.++++..++.++.+ + ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-------K----KIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-------C----chhhCCHHHHHHHHHHHH
Confidence 99999999886 99999975311 111 345666777777765432 2 335799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998778999999999999865 7999999999999875
No 239
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.4e-41 Score=393.02 Aligned_cols=220 Identities=31% Similarity=0.484 Sum_probs=188.0
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
..|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++...++. ++.
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 35999999999963 3589999999999999999999999999999999999999999999999999877654 468
Q ss_pred eEEEccCccccch-hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
||||+|++.+|+. ||+|||.|+... .+..+..+ .+.+.++.+ |++........+||||||||++|||||+
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~p~~LSgGq~QRVaLARaL~ 160 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMV--QLEEFAQRKPHQLSGGQQQRVAIARAVV 160 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999966 999999987431 12222111 122334444 6666677778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCc
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDG 584 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 584 (1230)
.+|++||||||||+||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|++++.|++++++.++..
T Consensus 161 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~ 238 (375)
T PRK09452 161 NKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKN 238 (375)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999998864 38999999999999765 999999999999999999999875443
No 240
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-41 Score=375.40 Aligned_cols=215 Identities=32% Similarity=0.505 Sum_probs=184.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 459999999999999999999999999999999999999999999999999876543 256899
Q ss_pred EEccCccccc-hhHHHHHhcCCCCC------CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 435 LVSQEHALFG-TSIKDNIMFGKLDA------TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 435 ~v~Q~~~l~~-~ti~~Ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
|++|+|.+|. .|++||+.++.... ..++. ...+.+.++.+ |++........+||||||||++||||
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~a 150 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEI-----RAKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARA 150 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHH-----HHHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 9999999986 59999999763211 11111 11233445555 67666777888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|+.+|+++||||||++||+++.+.+.+.|.+.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 151 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 151 LAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 999999999999999999999999999998864 37899999999998765 999999999999999999998753
No 241
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.2e-41 Score=389.13 Aligned_cols=224 Identities=27% Similarity=0.382 Sum_probs=186.9
Q ss_pred cEEEEEEEEECCCCC----------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC
Q 000909 991 KIEMRRVDFAYPSRP----------DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE 1060 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~----------~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1060 (1230)
-|+++||+++|+.+. ..++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999998
Q ss_pred CChH---HHhhcceEEcccc--cCC-cccHHHHhccCC----CCCCHHH----HHHHHHHhchHHHHHhccccccccccC
Q 000909 1061 LDVH---WYRKHTALVSQEP--VIY-AGNIRDNIVFGK----LDASENE----VVEAARAANAHEFISSLKDGYETECGE 1126 (1230)
Q Consensus 1061 i~~~---~lR~~i~~VpQdp--~Lf-~gTIreNl~~g~----~~~sd~e----i~~al~~a~l~~~i~~lp~gldt~vge 1126 (1230)
++.. .+|++++||+|+| .|+ ..||.+|+.++. +..+.++ +.++++.+++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 8754 4678999999999 477 479999986431 1233333 334455555421 11234
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeC
Q 000909 1127 RGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVAD 1203 (1230)
Q Consensus 1127 ~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~ 1203 (1230)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4568999999999999999999999999999999999999999999998753 8899999999999975 899999999
Q ss_pred cEEEEecCHhHHhhc-ccccHH
Q 000909 1204 GRVVERGTYAQLTHM-RGAFFN 1224 (1230)
Q Consensus 1204 G~Ive~Gt~~eLl~~-~g~y~~ 1224 (1230)
|+|+|.|++++++++ ...|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 999999999999876 334544
No 242
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.1e-41 Score=370.98 Aligned_cols=207 Identities=28% Similarity=0.483 Sum_probs=177.3
Q ss_pred EEEEEEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 992 IEMRRVDFAYPSRPD-ALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
|+++||+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 789999999974311 269999999999999999999999999999999999999999999999999976 456778999
Q ss_pred eEEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.+.. .....+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELL-----------DRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975321 112 23455566666665443 3345689999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
|++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999874 48999999999998865 7999999999998865
No 243
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.1e-42 Score=369.52 Aligned_cols=199 Identities=26% Similarity=0.506 Sum_probs=173.5
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceE
Q 000909 993 EMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTAL 1072 (1230)
Q Consensus 993 ~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1072 (1230)
+++||+++|++. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 468999999631 469999999999999999999999999999999999999999999999999864 456788999
Q ss_pred Ecccc--cCCcccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccC
Q 000909 1073 VSQEP--VIYAGNIRDNIVFGKLD--ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRN 1148 (1230)
Q Consensus 1073 VpQdp--~Lf~gTIreNl~~g~~~--~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~ 1148 (1230)
+||+| .+|..|++||+.++.+. ..++++.++++..++.++..+. ...||||||||++||||++++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERH-----------PLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCC-----------chhCCHHHHHHHHHHHHHHhC
Confidence 99998 46788999999875432 2235677888888876664433 347999999999999999999
Q ss_pred CCEEEeecccCCcCHHHHHHHHHHHHHh-cCCCeEEEEccCchhhhh-cCEEEEEeCcEEE
Q 000909 1149 PTILLLDEATSALDVQSEQVVQEALDRI-MMGRTTIVVAHRLNTIKK-LDSIALVADGRVV 1207 (1230)
Q Consensus 1149 p~ILlLDEaTSaLD~~te~~I~~~l~~~-~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv 1207 (1230)
|++|||||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999987 358899999999999875 8999999999985
No 244
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=380.70 Aligned_cols=214 Identities=29% Similarity=0.444 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 4999999999963 3699999999999999999999999999999999999999999999999999888888899999
Q ss_pred eEEcccccCCcc-cHHHHhccCCC----------CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKL----------DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~----------~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
+|+||++.++.+ |+++|+.++.. ...++++.++++.+++.+++... ..+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----------VDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCCHHHHHHH
Confidence 999999877665 99999986521 01234567777777776554332 347999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
+||||++.+|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 3799999999999986 58999999999999999999987
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
+.
T Consensus 237 ~~ 238 (265)
T PRK10575 237 RG 238 (265)
T ss_pred CH
Confidence 53
No 245
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-42 Score=380.35 Aligned_cols=217 Identities=31% Similarity=0.506 Sum_probs=186.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCCCC--hH
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRELD--VH 1064 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i~--~~ 1064 (1230)
=+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++. |++|+|.++|.++.+.+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999963 469999999999999999999999999999999999986 47999999999987653 34
Q ss_pred HHhhcceEEcccccCCcccHHHHhccCCC--CC------CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1065 WYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA------SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1065 ~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~------sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
.+|++++|+||++.+|.+|+++|+.++.. +. .++++.++++..++.+.+. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 67899999999999999999999986521 11 1234556666666644321 223455678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 899999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
++.
T Consensus 236 ~~~ 238 (251)
T PRK14244 236 FKN 238 (251)
T ss_pred hcC
Confidence 876
No 246
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=376.14 Aligned_cols=221 Identities=34% Similarity=0.551 Sum_probs=185.8
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCC---HHHHhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQ---LKWVRR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~---~~~~r~ 431 (1230)
++++|++++|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999964 145999999999999999999999999999999999999999999999999998776 456788
Q ss_pred heEEEccCccccc-hhHHHHHhcCCCCCC--HHHH---HHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 432 EMGLVSQEHALFG-TSIKDNIMFGKLDAT--MDEV---IAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~-~ti~~Ni~~~~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
.++|++|++.+|. .|++||+.++..... ...+ ........+.+.++.+ |++......+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 9999999998886 599999987532110 0000 0011112234455555 676667888899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHH
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLI 579 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 579 (1230)
||++.+|++|||||||++||+.+...+.+.|++.. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999998864 48999999999999984 9999999999999999998863
No 247
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.2e-41 Score=378.71 Aligned_cols=213 Identities=27% Similarity=0.444 Sum_probs=183.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC---------
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD--------- 1062 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------- 1062 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999963 35999999999999999999999999999999999999999999999999997653
Q ss_pred ----hHHHhhcceEEcccccCCc-ccHHHHhccCCC---CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCC
Q 000909 1063 ----VHWYRKHTALVSQEPVIYA-GNIRDNIVFGKL---DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQ 1130 (1230)
Q Consensus 1063 ----~~~lR~~i~~VpQdp~Lf~-gTIreNl~~g~~---~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~ 1130 (1230)
...+|++++|+||++.+|. .|+++|+.++.. ... ++++.++++..++.++. ......
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKA-----------DHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHh-----------hcChhh
Confidence 2467889999999999885 799999986421 112 23445555555555443 344568
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEE
Q 000909 1131 LSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVV 1207 (1230)
Q Consensus 1131 LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Iv 1207 (1230)
||||||||++||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 789999999999985 58999999999999
Q ss_pred EecCHhHHhhc
Q 000909 1208 ERGTYAQLTHM 1218 (1230)
Q Consensus 1208 e~Gt~~eLl~~ 1218 (1230)
+.|+++++.+.
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999999865
No 248
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-42 Score=377.40 Aligned_cols=216 Identities=28% Similarity=0.450 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999641 45999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||+|.+|. .|++||+.++.. ..+ ++++.++++..++.+ +......+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999999986 699999976421 111 123344444444421 012344567899999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
++++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998753 8999999999998754 799999999999999999999765
No 249
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=379.45 Aligned_cols=218 Identities=32% Similarity=0.496 Sum_probs=186.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCCCC--h
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRELD--V 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~--~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++...+ .
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3599999999999999999999999999999999999985 7999999999986533 4
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
..+|+.++|+||++.+|..|++||+.++.. ..+. +++.++++.+++.+.+. .........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCHHHHH
Confidence 567889999999999999999999986421 1222 23555666666543221 1223445689999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
|++|||||+.+|+||||||||++||+++...+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988678999999999999865 8999999999999999999998
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
++
T Consensus 242 ~~ 243 (258)
T PRK14268 242 HN 243 (258)
T ss_pred cC
Confidence 65
No 250
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-41 Score=377.38 Aligned_cols=219 Identities=31% Similarity=0.528 Sum_probs=187.7
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCC--CC
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRE--LD 1062 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 1062 (1230)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+ .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 56999999999963 3599999999999999999999999999999999999863 68999999999875 45
Q ss_pred hHHHhhcceEEcccccCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhH
Q 000909 1063 VHWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQ 1135 (1230)
Q Consensus 1063 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1135 (1230)
...+|++++|+||+|.+|+.|+++|+.++.. .. .++++.++++.+++.+.+. ........+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHH
Confidence 5678999999999999999999999987521 11 1334555666666544332 22344567899999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhH
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQ 1214 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1214 (1230)
|||++||||++.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999998865 79999999999999999999
Q ss_pred Hhhc
Q 000909 1215 LTHM 1218 (1230)
Q Consensus 1215 Ll~~ 1218 (1230)
+...
T Consensus 232 ~~~~ 235 (250)
T PRK14240 232 LFTN 235 (250)
T ss_pred HHhC
Confidence 8765
No 251
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=378.35 Aligned_cols=218 Identities=28% Similarity=0.422 Sum_probs=185.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CCCeEEECCeecCCC--Ch
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD--V---EQGSVRVDGMDVREL--DV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i--~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++ | ++|+|.+||.+++.. +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 359999999999999999999999999999999999954 6 489999999998653 34
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|+.++||||+|.+|+.|++||+.++.. .. .++++.++++.+++.+.+. +.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1234555666666644332 223455678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998864 899999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
++.
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 865
No 252
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.2e-41 Score=357.67 Aligned_cols=178 Identities=32% Similarity=0.646 Sum_probs=166.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|+.+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23699999999999999999999999999999999999999999999999998776 667889999
Q ss_pred EEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000909 1072 LVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTI 1151 (1230)
Q Consensus 1072 ~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~I 1151 (1230)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 457999999999999999999999
Q ss_pred EEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCcEEEEec
Q 000909 1152 LLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERG 1210 (1230)
Q Consensus 1152 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~G 1210 (1230)
|||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999989999999999999865
No 253
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=378.88 Aligned_cols=219 Identities=30% Similarity=0.472 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 359999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|+.++|++|++.+|+.|++||+.++.. .. .++++.++++..+++... +.. ......+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~----~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---KDN----LDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---HHH----hccChhhCCHHHH
Confidence 667889999999999999999999986521 11 123445555665553211 111 2345678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 799999999999999999999
Q ss_pred hhcc
Q 000909 1216 THMR 1219 (1230)
Q Consensus 1216 l~~~ 1219 (1230)
....
T Consensus 234 ~~~~ 237 (251)
T PRK14251 234 FIAP 237 (251)
T ss_pred HhCC
Confidence 7653
No 254
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.6e-41 Score=370.93 Aligned_cols=217 Identities=28% Similarity=0.440 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH-hhhe
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV-RREM 433 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~-r~~i 433 (1230)
|+++||+++|++ +++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 359999999999999999999999999999999999999999999999999988776554 6689
Q ss_pred EEEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
+|++|++.+|+. |++||+.++.......+.. ..+.+.++.++ +++......+.+||||||||++||||++.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRK-----ARLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHH-----HHHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999999764322111111 11122233331 2444556777899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 513 VILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+++||||||++||+.++..+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999998764 58999999999999866 99999999999999999887653
No 255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=7.6e-42 Score=372.21 Aligned_cols=204 Identities=30% Similarity=0.453 Sum_probs=172.8
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH----H
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW----Y 1066 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~----l 1066 (1230)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 146999999999999999999999999999999999999999999999999998876432 4
Q ss_pred hhcceEEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1067 RKHTALVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1067 R~~i~~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
|++++|+||+|.+|.+ |++||+.++.. ... ++++.++++..++.+. ......+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHHH
Confidence 6789999999999986 99999987532 111 2234455555554433 3344568999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCcEE
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKKLDSIALVADGRV 1206 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~I 1206 (1230)
+|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7999999999999988899999999974
No 256
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=379.85 Aligned_cols=214 Identities=27% Similarity=0.465 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC-hHHHhhcc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD-VHWYRKHT 1070 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~lR~~i 1070 (1230)
|+++||+++|++ ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 235999999999999999999999999999999999999999999999999998775 46788999
Q ss_pred eEEccccc--CCcccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1071 ALVSQEPV--IYAGNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1071 ~~VpQdp~--Lf~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
+|+||+|. +++.|+++|+.++.. ..+ ++++.++++..++.++. ...+..||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYR-----------HRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCCcccCCHHHHHHHHHH
Confidence 99999985 677899999987532 122 23345556666665443 334568999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||++.+|+||||||||++||+.+...+.+.+++.. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998865 48999999999999988999999999999999999998754
No 257
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=370.00 Aligned_cols=209 Identities=26% Similarity=0.406 Sum_probs=180.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|++ .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3599999999999999999999999999999999999999999999999998763 356788999
Q ss_pred EEcccccCCcc-cHHHHhccCCC--CC----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGKL--DA----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~~--~~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||++.+|.. |+++|+.++.. .. .++++.++++..++.++... ....||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADR-----------LVKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhCCHHHHHHHHHHHH
Confidence 99999998875 99999976311 11 23345667777777655432 235799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
++.+|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999998653 7899999999999875 799999999999999998874
No 258
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=379.96 Aligned_cols=216 Identities=29% Similarity=0.483 Sum_probs=185.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
-|+++|++++|+. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+..+++++|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 23599999999999999999999999999999999999999999999999999888888888899
Q ss_pred EEEccCc--cccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 434 GLVSQEH--ALFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 434 ~~v~Q~~--~l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
+|++|+| .++..|++||+.++... .+.++..+ .+.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgG~~qrv~laraL~ 154 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVER-----RVEEALKAV--RMWDFRDKPPYHLSYGQKKRVAIAGVLA 154 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999998 57788999999986321 12222111 122334444 5655566677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-ccCEEEEEeCCeEEEecChhHH
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVR-NADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l 578 (1230)
.+|++|||||||++||+.+...+.+.+++.. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 155 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 155 MDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999998764 4899999999999985 5999999999999999998764
No 259
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.1e-41 Score=374.72 Aligned_cols=217 Identities=27% Similarity=0.426 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH-hhcc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY-RKHT 1070 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 1070 (1230)
|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999963 359999999999999999999999999999999999999999999999999988776554 5679
Q ss_pred eEEcccccCCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHcc
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKL--DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIR 1147 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~ 1147 (1230)
+|+||++.+|.+ |++||+.++.+ ....++..+ .+.+.++.+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999987 99999986432 112221111 122333333 34444455667899999999999999999
Q ss_pred CCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1148 NPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1148 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 223 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAAN 223 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhcC
Confidence 999999999999999999999999998875 47899999999987765 799999999999999999998753
No 260
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=379.68 Aligned_cols=217 Identities=28% Similarity=0.438 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999988888899999
Q ss_pred eEEccccc--CCcccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1071 ALVSQEPV--IYAGNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1071 ~~VpQdp~--Lf~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
+|+||+|. ++..|+++|+.++.. ... ++++.++++..++.++. .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHHH
Confidence 99999994 455689999987532 122 23445556666654432 234568999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+..
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 233 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDHA 233 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcCH
Confidence 999999999999999999999999999999998753 78999999999999889999999999999999999987653
No 261
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=377.83 Aligned_cols=218 Identities=32% Similarity=0.496 Sum_probs=186.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc---ccC--CCCeEEECCeecCCC--Ch
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRF---YDV--EQGSVRVDGMDVREL--DV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl---~~p--~~G~I~idG~di~~i--~~ 1063 (1230)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999963 3599999999999999999999999999999999997 454 589999999999764 34
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++|+||+|.+|..|+++|+.++.. .. .+++++++++..++.+++. +.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 677889999999999999999999986421 11 1234556666666644332 223455678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 4899999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
.++
T Consensus 233 ~~~ 235 (250)
T PRK14245 233 FTN 235 (250)
T ss_pred hcC
Confidence 865
No 262
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-41 Score=377.93 Aligned_cols=218 Identities=25% Similarity=0.417 Sum_probs=186.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD--V---EQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~~ 1063 (1230)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999963 359999999999999999999999999999999999997 3 58999999999864 445
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--C-CCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--D-ASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~-~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++|+||+|.+|.+|++||+.++.. . .++ +++.++++..++.+++. +.....+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 678899999999999999999999986521 1 122 23444556666644432 223455678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|+||||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 799999999999999999998
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
+++
T Consensus 242 ~~~ 244 (259)
T PRK14274 242 FSN 244 (259)
T ss_pred hhC
Confidence 765
No 263
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=394.66 Aligned_cols=212 Identities=29% Similarity=0.498 Sum_probs=184.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+.. ++++
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999877653 5789
Q ss_pred eEEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+||||++.+|.. |++||+.++.. ..+ ++++.++++..++.++..+ ...+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~-----------~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDR-----------KPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 999999999965 99999987632 122 2345666777776554433 34579999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999988743 789999999999876 5899999999999999999999875
No 264
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.5e-41 Score=367.00 Aligned_cols=203 Identities=25% Similarity=0.421 Sum_probs=179.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|++ .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+. ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999963 4699999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEcccccCC-cccHHHHhccCC--CCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccC
Q 000909 1072 LVSQEPVIY-AGNIRDNIVFGK--LDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRN 1148 (1230)
Q Consensus 1072 ~VpQdp~Lf-~gTIreNl~~g~--~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~ 1148 (1230)
|+||++.+| +.|++||+.++. ...+++++.++++..++.+...+ ....||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 999999887 579999997642 12346677888888888765433 3457999999999999999999
Q ss_pred CCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1149 PTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1149 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999865 48999999999999865 8999999999999875
No 265
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-41 Score=374.17 Aligned_cols=218 Identities=32% Similarity=0.539 Sum_probs=187.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
++++||+++|++. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999741 45999999999999999999999999999999999999999999999999998887777888999
Q ss_pred EEccCccccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccc--hhcCCCCCCChhHHHHHHHHHHhc
Q 000909 435 LVSQEHALFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYET--KVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 435 ~v~Q~~~l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
|++|++.+|. .|++||+.++... ...++ ....+.+.++.+ |+.. ...+.+.+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~-----~~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEK-----IRERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999986 5999999875311 11111 112234556665 6654 567788999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
++|+++||||||++||+.+.+.+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999998864 38999999999998765 999999999999999999988653
No 266
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2e-41 Score=377.91 Aligned_cols=216 Identities=28% Similarity=0.435 Sum_probs=184.7
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCC--------
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVREL-------- 1061 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i-------- 1061 (1230)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 56999999999963 4599999999999999999999999999999999999999999999999998642
Q ss_pred -----ChHHHhhcceEEcccccCCcc-cHHHHhccCC---CCCC----HHHHHHHHHHhchHHHHHhccccccccccCCC
Q 000909 1062 -----DVHWYRKHTALVSQEPVIYAG-NIRDNIVFGK---LDAS----ENEVVEAARAANAHEFISSLKDGYETECGERG 1128 (1230)
Q Consensus 1062 -----~~~~lR~~i~~VpQdp~Lf~g-TIreNl~~g~---~~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G 1128 (1230)
....+|++++||||+|.+|.. |++||+.++. .... ++++.++++..++.+.. .....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 135678899999999999975 9999997531 1112 22344555555554332 13456
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEE
Q 000909 1129 VQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRV 1206 (1230)
Q Consensus 1129 ~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~I 1206 (1230)
..||||||||++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6899999999999999999999999999999999999999999999875 48999999999999986 799999999999
Q ss_pred EEecCHhHHhhc
Q 000909 1207 VERGTYAQLTHM 1218 (1230)
Q Consensus 1207 ve~Gt~~eLl~~ 1218 (1230)
++.|+++++.+.
T Consensus 231 ~~~~~~~~~~~~ 242 (257)
T PRK10619 231 EEEGAPEQLFGN 242 (257)
T ss_pred EEeCCHHHhhhC
Confidence 999999999865
No 267
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-41 Score=377.30 Aligned_cols=225 Identities=30% Similarity=0.484 Sum_probs=189.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCCC--Ch
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVREL--DV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 3599999999999999999999999999999999999984 899999999998753 34
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--C-C----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--D-A----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~-~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++|+||+|.+|..|++||+.++.. . . .++++.++++..++.+.+.. .......+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHH
Confidence 567889999999999999999999986421 1 1 12345566666666543322 23456678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999999999877899999999999875 4899999999999999999999
Q ss_pred hhcc-cccHHH
Q 000909 1216 THMR-GAFFNL 1225 (1230)
Q Consensus 1216 l~~~-g~y~~l 1225 (1230)
.+.. ..|.+.
T Consensus 233 ~~~~~~~~~~~ 243 (250)
T PRK14262 233 VERPKNKLTEE 243 (250)
T ss_pred HhCCCChHHHH
Confidence 8753 234443
No 268
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-41 Score=373.96 Aligned_cols=212 Identities=29% Similarity=0.471 Sum_probs=179.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH-Hhhcc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW-YRKHT 1070 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1070 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999963 36999999999999999999999999999999999999999999999999998887654 46789
Q ss_pred eEEcccccCCcc-cHHHHhccCCCC--CCHHH-HHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKLD--ASENE-VVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~~--~sd~e-i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
+|+||++.+|.. |+++|+.++... ...++ ..++++..+ +++........+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999986 999999865321 11122 122222221 2223334556689999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998753 7899999999999985 8999999999999999999973
No 269
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=372.90 Aligned_cols=219 Identities=34% Similarity=0.514 Sum_probs=186.7
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH---HHh
Q 000909 355 IEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK---WVR 430 (1230)
Q Consensus 355 i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~---~~r 430 (1230)
|+++|++++|+++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .++
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999997431 12699999999999999999999999999999999999999999999999999876543 347
Q ss_pred hheEEEccCccccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 431 REMGLVSQEHALFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
+.++|++|++.+|. .|++||+.++... ....+. ...+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 88999999999997 5999999875321 111111 12334556666 77777777888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++.+|+++||||||++||+.+...+.+.+++.. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999998864 38999999999999865 99999999999999999888764
No 270
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.6e-41 Score=374.53 Aligned_cols=221 Identities=30% Similarity=0.518 Sum_probs=185.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH---HHHhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL---KWVRR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~---~~~r~ 431 (1230)
|+++||+++|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2459999999999999999999999999999999999999999999999999887654 34678
Q ss_pred heEEEccCccccc-hhHHHHHhcCCCCCC--HHHH---HHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 432 EMGLVSQEHALFG-TSIKDNIMFGKLDAT--MDEV---IAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~-~ti~~Ni~~~~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
+++|++|++.+|. .|++||+.++..... .... ........+.+.++.+ |++......+.+||||||||++||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 9999999999886 599999987642110 0000 0001112334455665 777777888899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHH
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLI 579 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 579 (1230)
|||+.+|+++||||||++||+.+...+.+.|++.. .++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 99999999999999999999999999999998863 37999999999999865 9999999999999999998863
No 271
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=380.11 Aligned_cols=218 Identities=28% Similarity=0.448 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 4999999999963 359999999999999999999999999999999999875 789999999999865 344
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC---CC----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL---DA----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~---~~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++|+||+|.+|++|+++|+.++.. .. .++.+.++++..++.+.+. ........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1233555666665532221 123455678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999877789999999999876 5799999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
..+
T Consensus 251 ~~~ 253 (268)
T PRK14248 251 FTS 253 (268)
T ss_pred HhC
Confidence 865
No 272
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-41 Score=378.09 Aligned_cols=219 Identities=30% Similarity=0.449 Sum_probs=187.8
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--CC
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--LD 1062 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1062 (1230)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 35999999999963 359999999999999999999999999999999999987 689999999999863 56
Q ss_pred hHHHhhcceEEcccccCCcccHHHHhccCCC--CC---CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1063 VHWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA---SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1063 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~---sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
...+|++++|+||+|.+|..|++||+.++.. .. .++++.++++.+++.+.+ +........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCHHHHH
Confidence 6788999999999999999999999987532 11 134455666666654332 22334556789999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeC-----------cE
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVAD-----------GR 1205 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~-----------G~ 1205 (1230)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 99999999999999999999999999999999999998877899999999999886 5799999996 77
Q ss_pred EEEecCHhHHhhc
Q 000909 1206 VVERGTYAQLTHM 1218 (1230)
Q Consensus 1206 Ive~Gt~~eLl~~ 1218 (1230)
++|.|+++++.+.
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999999864
No 273
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=383.10 Aligned_cols=220 Identities=25% Similarity=0.444 Sum_probs=185.6
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC---------
Q 000909 355 IEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR--------- 423 (1230)
Q Consensus 355 i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~--------- 423 (1230)
|+++|++++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999997432 1359999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CCHHHHhhheEEEccCc--cccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCccc
Q 000909 424 ---------------LQLKWVRREMGLVSQEH--ALFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYE 484 (1230)
Q Consensus 424 ---------------~~~~~~r~~i~~v~Q~~--~l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~ 484 (1230)
.+...+++.||||+|+| .+|..||+|||.|+... ...++..+ .+.+.++.+ |++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~ 155 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKK-----RAAKYIELV--GLD 155 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHc--CCC
Confidence 13456788999999986 67888999999987432 22333322 123445555 675
Q ss_pred -chhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-ccCEE
Q 000909 485 -TKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVR-NADLI 561 (1230)
Q Consensus 485 -t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i 561 (1230)
........+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .||+|
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 45778889999999999999999999999999999999999999999999998764 5899999999999875 49999
Q ss_pred EEEeCCeEEEecChhHHHhh
Q 000909 562 AVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 562 ~~l~~G~i~~~g~~~~l~~~ 581 (1230)
++|++|++++.|+++++.+.
T Consensus 236 ~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEECCEEEEECCHHHHhcC
Confidence 99999999999999998753
No 274
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.1e-41 Score=374.75 Aligned_cols=212 Identities=22% Similarity=0.402 Sum_probs=183.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH-hhcc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY-RKHT 1070 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 1070 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 359999999999999999999999999999999999999999999999999988876654 5579
Q ss_pred eEEcccccCCcc-cHHHHhccCCCCC--------------CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhH
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFGKLDA--------------SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQ 1135 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g~~~~--------------sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1135 (1230)
+|+||++.+|.+ |++||+.++.... .++++.++++.. |++.........|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI-----------GLADEADRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHH
Confidence 999999999986 9999998753210 112233333333 34434445667899999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhH
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQ 1214 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1214 (1230)
|||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999975 89999999999999999999
Q ss_pred Hhh
Q 000909 1215 LTH 1217 (1230)
Q Consensus 1215 Ll~ 1217 (1230)
+..
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 875
No 275
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.8e-41 Score=370.20 Aligned_cols=205 Identities=28% Similarity=0.447 Sum_probs=173.2
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH---Hh
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW---YR 1067 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 1067 (1230)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 246999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -hcceEEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1068 -KHTALVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1068 -~~i~~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
++++|+||+|.+|. .|++||+.++.. ..+ .+++.++++..++.+ ........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEH-----------RINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHH
Confidence 68999999999986 599999976321 111 123444455444433 33344568999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCcEEE
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKKLDSIALVADGRVV 1207 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Iv 1207 (1230)
+||||++++|+||||||||++||+++...+.+.|++.. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999874 378999999999999989999999999986
No 276
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.1e-41 Score=374.10 Aligned_cols=213 Identities=30% Similarity=0.496 Sum_probs=182.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCC--ChHHHhhc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVREL--DVHWYRKH 1069 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i--~~~~lR~~ 1069 (1230)
|+++|++++|++ .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 789999999963 3599999999999999999999999999999999999999999999999999864 34577889
Q ss_pred ceEEcccccCCc-ccHHHHhccCCC---CCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1070 TALVSQEPVIYA-GNIRDNIVFGKL---DASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1070 i~~VpQdp~Lf~-gTIreNl~~g~~---~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
++|+||++.+|. .|+++|+.++.. ..+.+ ++.++++..++ +.........||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGL-----------AERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hHHHhcChhhcCHHHHHHHHH
Confidence 999999998886 599999987521 12222 23334444444 333344556899999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
|||++++|++|||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999999999875 48999999999999865 899999999999999999998765
No 277
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.1e-41 Score=362.31 Aligned_cols=203 Identities=36% Similarity=0.579 Sum_probs=179.8
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
+.++++|++++|+.. +.++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 569999999999742 2369999999999999999999999999999999999999999999999999988888888899
Q ss_pred eEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 433 MGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 433 i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
|+||+|+|.+|++|++||+.+... ...+++.++++ +++++.+|||||+||++||||++.+|
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999999999999986532 23333222211 35677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecCh
Q 000909 513 VILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTH 575 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 575 (1230)
+++||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999987778999999999999988999999999999988763
No 278
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.6e-41 Score=370.21 Aligned_cols=215 Identities=28% Similarity=0.484 Sum_probs=182.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++||+++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999642 246999999999999999999999999999999999999999999999999987643 56778899
Q ss_pred EEccCcccc-chhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALF-GTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~-~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|++|++.++ ..|++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++||||++.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIK-----EEVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 999999988 4699999986421 11111111 1233445555 565556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
|+++||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999987777999999999999865 999999999999999998775
No 279
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-41 Score=376.60 Aligned_cols=220 Identities=29% Similarity=0.458 Sum_probs=183.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~--~~~ 426 (1230)
.|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 359999999999999999999999999999999999975 689999999999865 345
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCC--CC-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKL--DA-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..+|+.++|++|++.+|+.|++||+.++.. .. ..++..+ .+.+.++.+ .+.+.+..++.+.+||||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qr 157 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAE-----RVERSLRHAALWDEVKDRLHESALGLSGGQQQR 157 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHH-----HHHHHHHHcCCchhhhHHhhCCcccCCHHHHHH
Confidence 567889999999999998899999987521 11 1111111 111222222 1112334577788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 158 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 237 (253)
T PRK14242 158 LCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFT 237 (253)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999987668999999999999865 99999999999999999999876
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
.
T Consensus 238 ~ 238 (253)
T PRK14242 238 R 238 (253)
T ss_pred C
Confidence 4
No 280
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-42 Score=359.88 Aligned_cols=230 Identities=31% Similarity=0.480 Sum_probs=193.2
Q ss_pred cEEEEEEEEECCCCCC---------------------CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000909 354 EIEFEHVKFSYPSRPD---------------------SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDG 412 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~---------------------~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 412 (1230)
.|+++||++-|+.+++ ..-++|+||+|+.||+..|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5888999988864321 1357899999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCCHHHHh----hheEEEccCccccch-hHHHHHhcCCCCC--CHHHHHHHHHHHhHHHHHHhCCCcccc
Q 000909 413 IVRIDGVDIRRLQLKWVR----REMGLVSQEHALFGT-SIKDNIMFGKLDA--TMDEVIAAATAANAHNFIRQLPEGYET 485 (1230)
Q Consensus 413 ~i~~~g~~i~~~~~~~~r----~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t 485 (1230)
+|++||.|+..++.+++| +++++|+|+..|++- ||.||..||.+-. ..+|- ...+.+.++.. |++.
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er-----~~~a~~~l~~V--gL~~ 156 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAER-----EERALEALELV--GLEG 156 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHH-----HHHHHHHHHHc--Cchh
Confidence 999999999999977654 589999999999975 9999999996522 22221 12223334444 6666
Q ss_pred hhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEE
Q 000909 486 KVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIA 562 (1230)
Q Consensus 486 ~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~ 562 (1230)
.-...+.+||||+||||.|||||..+|+||++|||+|||||--+..+|+.+.++. -+||+++|||++++.-+ .|||.
T Consensus 157 ~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIa 236 (386)
T COG4175 157 YADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIA 236 (386)
T ss_pred hhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEE
Confidence 6666778999999999999999999999999999999999999999999987754 47999999999999754 99999
Q ss_pred EEeCCeEEEecChhHHHhhcCcHHHHHH
Q 000909 563 VVDNGCLVEIGTHNDLINRIDGHYAKMA 590 (1230)
Q Consensus 563 ~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 590 (1230)
.|++|+|+..|||+|++.++...|-.-+
T Consensus 237 imkdG~ivQ~Gtp~eIl~~PAndYV~~F 264 (386)
T COG4175 237 IMKDGEIVQVGTPEEILLNPANDYVRDF 264 (386)
T ss_pred EecCCeEEEeCCHHHHHcCccHHHHHHH
Confidence 9999999999999999987766665433
No 281
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-41 Score=368.84 Aligned_cols=207 Identities=36% Similarity=0.564 Sum_probs=176.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999963 459999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEccCccccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|++|++.+|. .|++||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|||||+++
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIR-----ARVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 5999999875321 1111111 1233455555 777667777889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
|+++||||||++||+.+...+.+.|.+.. .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998864 38999999999999865 9999999999998765
No 282
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.2e-41 Score=379.35 Aligned_cols=214 Identities=25% Similarity=0.389 Sum_probs=182.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChH---HHh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVH---WYR 1067 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1067 (1230)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999877643 457
Q ss_pred hcceEEcccccCCcc-cHHHHhccCCC---CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1068 KHTALVSQEPVIYAG-NIRDNIVFGKL---DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~g-TIreNl~~g~~---~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
++++|+||++.+|.+ |++||+.++.. ..+. +.+.++++..++.+. ......+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 889999999999986 99999976421 1122 233344555544332 2234467999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
+||||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998743 7899999999999876 7999999999999999999998
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
++
T Consensus 233 ~~ 234 (269)
T PRK11831 233 AN 234 (269)
T ss_pred cC
Confidence 65
No 283
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.8e-41 Score=384.96 Aligned_cols=229 Identities=28% Similarity=0.386 Sum_probs=191.4
Q ss_pred cEEEEEEEEECCCCC----------CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC
Q 000909 354 EIEFEHVKFSYPSRP----------DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR 423 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~----------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~ 423 (1230)
-|+++|++++|+.+. ...+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999996321 2468999999999999999999999999999999999999999999999999988
Q ss_pred CCHH---HHhhheEEEccCc--cccc-hhHHHHHhcCC----CCCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCC
Q 000909 424 LQLK---WVRREMGLVSQEH--ALFG-TSIKDNIMFGK----LDATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGA 492 (1230)
Q Consensus 424 ~~~~---~~r~~i~~v~Q~~--~l~~-~ti~~Ni~~~~----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~ 492 (1230)
.+.. .+|++|+||+|+| .+++ .||.|||.++. +..+.++..+. +.+.++.+ |++ ......+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHc--CCChHHhcCCcc
Confidence 8754 3577899999998 4774 69999997532 11233332222 22345554 553 34677888
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeE
Q 000909 493 LLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCL 569 (1230)
Q Consensus 493 ~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i 569 (1230)
+||||||||++|||||+.+|++||+||||++||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|+|
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998864 38999999999999976 999999999999
Q ss_pred EEecChhHHHhhcCcHHHHH
Q 000909 570 VEIGTHNDLINRIDGHYAKM 589 (1230)
Q Consensus 570 ~~~g~~~~l~~~~~~~~~~~ 589 (1230)
++.|+++++.+++...|.+.
T Consensus 241 ve~g~~~~i~~~~~~py~~~ 260 (331)
T PRK15079 241 VELGTYDEVYHNPLHPYTKA 260 (331)
T ss_pred EEEcCHHHHHcCCCCHHHHH
Confidence 99999999987655566553
No 284
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-41 Score=374.88 Aligned_cols=223 Identities=30% Similarity=0.410 Sum_probs=184.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~--~~~ 426 (1230)
-|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5899999999963 3599999999999999999999999999999999999997 48999999999853 344
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCC---CCHH----HHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLD---ATMD----EVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQK 499 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 499 (1230)
..+|+.|+|++|++.+|+.|++|||.++... ...+ ++.++++..++. +++.......+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALW-------NEVKDKLNTNALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCc-------hhhHHHHhCCcccCCHHHH
Confidence 5678899999999999989999999976321 1111 122222222211 1112334557789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999999
Q ss_pred HhhcCcHH
Q 000909 579 INRIDGHY 586 (1230)
Q Consensus 579 ~~~~~~~~ 586 (1230)
.++....|
T Consensus 237 ~~~~~~~~ 244 (254)
T PRK14273 237 FFNPKNTK 244 (254)
T ss_pred HhCCCChH
Confidence 76434333
No 285
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.4e-41 Score=368.75 Aligned_cols=203 Identities=33% Similarity=0.556 Sum_probs=174.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999963 3599999999999999999999999999999999999999999999999999776543 57899
Q ss_pred EEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.++.. .....||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLD-----------RKPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHh-----------CChhhCCHHHHHHHHHHHH
Confidence 9999999885 599999986421 112 223455566666655433 3345799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
++++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999874 37999999999999876 7999999999999876
No 286
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=375.59 Aligned_cols=220 Identities=27% Similarity=0.440 Sum_probs=187.6
Q ss_pred cCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CCCeEEECCeecCCC--
Q 000909 989 SGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD--V---EQGSVRVDGMDVREL-- 1061 (1230)
Q Consensus 989 ~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i-- 1061 (1230)
+|.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 367999999999963 359999999999999999999999999999999999986 4 689999999999753
Q ss_pred ChHHHhhcceEEcccccCCc-ccHHHHhccCCC--C-CC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCCh
Q 000909 1062 DVHWYRKHTALVSQEPVIYA-GNIRDNIVFGKL--D-AS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSG 1133 (1230)
Q Consensus 1062 ~~~~lR~~i~~VpQdp~Lf~-gTIreNl~~g~~--~-~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1133 (1230)
....+|++++|+||++.+|. .|++||+.++.. . .+ ++++.++++..++.+++.. .....+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCH
Confidence 44577899999999999998 599999986421 1 11 2345566666666544322 22345678999
Q ss_pred hHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCH
Q 000909 1134 GQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTY 1212 (1230)
Q Consensus 1134 GQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~ 1212 (1230)
|||||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+. .||++++|++|+|++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999999877889999999999986 4899999999999999999
Q ss_pred hHHhhc
Q 000909 1213 AQLTHM 1218 (1230)
Q Consensus 1213 ~eLl~~ 1218 (1230)
+++...
T Consensus 232 ~~~~~~ 237 (252)
T PRK14256 232 KKIFTT 237 (252)
T ss_pred HHHHhC
Confidence 999765
No 287
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.7e-41 Score=383.80 Aligned_cols=214 Identities=26% Similarity=0.450 Sum_probs=183.1
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhc
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKH 1069 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1069 (1230)
..|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 35999999999963 45999999999999999999999999999999999999999999999999997755 457899
Q ss_pred ceEEcccccCCc-ccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1070 TALVSQEPVIYA-GNIRDNIVFGKL--DASENE----VVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1070 i~~VpQdp~Lf~-gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
++|+||+|.+|. .|++||+.+... ..+..+ +.++++..++. +..++.+ .+||||||||++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~----~~LS~G~~qrl~la 150 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLE-------NKADAKV----GELSGGMKRRLTLA 150 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-------hHhcCch----hhCCHHHHHHHHHH
Confidence 999999999886 699999975221 223222 33344444433 3344444 47999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
|||+++|++|+|||||++||+.+.+.+++.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 151 ~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 151 RALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999999999875 48899999999999965 899999999999999999999765
No 288
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-41 Score=374.53 Aligned_cols=218 Identities=30% Similarity=0.506 Sum_probs=187.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----CCeEEECCeecCCC--Ch
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE-----QGSVRVDGMDVREL--DV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~i--~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++.+. +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 35999999999999999999999999999999999999997 69999999998653 45
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|+.++||||+|.+|+.|++||+.++.. .. . ++.+.++++..++++.+. ......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 678999999999999999999999987531 11 1 223444555566654433 224456778999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987668999999999999876 599999999999999999998
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 765
No 289
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.6e-41 Score=391.34 Aligned_cols=221 Identities=24% Similarity=0.415 Sum_probs=189.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
-|+++|++++|++ +.+|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.++.+++...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4889999999963 4699999999999999999999999999999999999999999999999999998888899999
Q ss_pred EEEccCccc-cchhHHHHHhcCCCCC--CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHAL-FGTSIKDNIMFGKLDA--TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l-~~~ti~~Ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
|||+|++.+ ++.|++||+.++.... .... ........+.+.++.+ |+.........+||||||||++|||||++
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~-~~~~~~~~v~~~le~v--gl~~~~~~~~~~LSgGerQRv~IArAL~~ 156 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDT-WTETDRAAVERAMERT--GVAQFADRPVTSLSGGERQRVLLARALAQ 156 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccC-CCHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 999999987 5679999999875311 0000 0001112223344444 66656677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+|++|||||||++||+.++..+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++++.|++++++.
T Consensus 157 ~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 157 ATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 999999999999999999999999999874 58899999999999955 99999999999999999999876
No 290
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.6e-41 Score=368.94 Aligned_cols=207 Identities=33% Similarity=0.531 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH---HHhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK---WVRR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~---~~r~ 431 (1230)
|+++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6899999999642 23599999999999999999999999999999999999999999999999999776543 4678
Q ss_pred heEEEccCccccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 432 EMGLVSQEHALFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
+++|++|++.+|. .|++||+.++... ...++. ...+.+.++.+ |++........+||||||||++|||||
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral 153 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDA-----NERVSAALEKV--GLEGKAHALPMQLSGGEQQRVAIARAI 153 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 9999999999886 4999999875211 111111 11223445555 666666677789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeE
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCL 569 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i 569 (1230)
+.+|+++||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 154 VHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999998764 48999999999999875 999999999975
No 291
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-41 Score=375.11 Aligned_cols=222 Identities=30% Similarity=0.474 Sum_probs=186.4
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--C
Q 000909 352 RGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR--L 424 (1230)
Q Consensus 352 ~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~--~ 424 (1230)
.+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 356999999999963 359999999999999999999999999999999999986 589999999999863 4
Q ss_pred CHHHHhhheEEEccCccccchhHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHH
Q 000909 425 QLKWVRREMGLVSQEHALFGTSIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQK 499 (1230)
Q Consensus 425 ~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqk 499 (1230)
+...+|++|+|++|++.+|+.|++||+.++.. ..+.++..+ .+.+.++.+ +.++.+..++...+||||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~ 162 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDE-----RVEWALTKAALWNEVKDKLHQSGYSLSGGQQ 162 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHH-----HHHHHHHHcCCChhhHHHHhcCCCCCCHHHH
Confidence 55678889999999999999999999987532 112222111 112223332 11234556778889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||++||||++.+|+++||||||++||+.+++.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 163 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (260)
T PRK10744 163 QRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTI 242 (260)
T ss_pred HHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987668899999999999865 999999999999999999998
Q ss_pred Hhh
Q 000909 579 INR 581 (1230)
Q Consensus 579 ~~~ 581 (1230)
...
T Consensus 243 ~~~ 245 (260)
T PRK10744 243 FTK 245 (260)
T ss_pred HhC
Confidence 764
No 292
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-41 Score=376.03 Aligned_cols=213 Identities=25% Similarity=0.461 Sum_probs=186.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+++...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEcccccCCcc-cHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGKLD----------ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
|+||++.+|.+ |++||+.++... ..++++.++++..++.++.+ .....||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-----------RRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-----------CCcccCCHHHHHHHH
Confidence 99999998876 999999875311 11234556666666654432 345679999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 9999999999999999999999999999999998865 48999999999999865 799999999999999999998753
No 293
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=379.04 Aligned_cols=217 Identities=27% Similarity=0.464 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCC----ChHH
Q 000909 992 IEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVREL----DVHW 1065 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 1065 (1230)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13699999999999999999999999999999999999999999999999999764 3567
Q ss_pred HhhcceEEcccc--cCCcccHHHHhccCCC--CCCHHHH----HHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1066 YRKHTALVSQEP--VIYAGNIRDNIVFGKL--DASENEV----VEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1066 lR~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~ei----~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
+|++++|+||+| .+|+.|+++|+.++.. ..+.++. .++++..++.+ .........|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 889999999998 6888999999986421 2233332 23333333321 1224456789999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
|++||||++++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999875 47899999999998864 799999999999999999998
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
++.
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 764
No 294
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-41 Score=391.85 Aligned_cols=218 Identities=29% Similarity=0.467 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999876653 4689
Q ss_pred EEEccCccccch-hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
+||+|++.+|+. |++|||.|+... .+.++.. ..+.+.++.+ |++........+||||||||++|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~-----~~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEIN-----QRVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 999999986421 1222211 1233445555 77766778888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcC
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRID 583 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 583 (1230)
+|++||||||||+||+.+++.+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 999999999999999999999999998764 38999999999998865 99999999999999999999976533
No 295
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-41 Score=392.17 Aligned_cols=199 Identities=32% Similarity=0.497 Sum_probs=174.7
Q ss_pred cccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH----hhcceEEcccccCCc-cc
Q 000909 1009 VLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY----RKHTALVSQEPVIYA-GN 1083 (1230)
Q Consensus 1009 vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~~i~~VpQdp~Lf~-gT 1083 (1230)
+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.|+.+.+...+ |++++||||++.+|. .|
T Consensus 43 ~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~T 122 (400)
T PRK10070 43 GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMT 122 (400)
T ss_pred EEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCC
Confidence 7999999999999999999999999999999999999999999999999998887654 357999999999997 59
Q ss_pred HHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecc
Q 000909 1084 IRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEA 1157 (1230)
Q Consensus 1084 IreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEa 1157 (1230)
++||+.++.. ..+ ++++.++++..++.++..+. ..+||||||||++|||||+.+|+|||||||
T Consensus 123 v~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~-----------~~~LSgGq~QRv~LArAL~~~P~iLLLDEP 191 (400)
T PRK10070 123 VLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSY-----------PDELSGGMRQRVGLARALAINPDILLMDEA 191 (400)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcC-----------cccCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 9999987521 112 24456667777776554433 357999999999999999999999999999
Q ss_pred cCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1158 TSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1158 TSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||+||+.+.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.+
T Consensus 192 ts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 192 FSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 99999999999999999874 48999999999999864 799999999999999999999876
No 296
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.7e-41 Score=373.27 Aligned_cols=213 Identities=29% Similarity=0.462 Sum_probs=181.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC--------h
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD--------V 1063 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------~ 1063 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999963 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhhcceEEcccccCCc-ccHHHHhccCC---CCCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhH
Q 000909 1064 HWYRKHTALVSQEPVIYA-GNIRDNIVFGK---LDASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQ 1135 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~-gTIreNl~~g~---~~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1135 (1230)
..+|++++||||+|.+|. .|++||+.++. .....+ .+.++++..+ ++........+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVG-----------LAGKETSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CcchhhCChhhCChHH
Confidence 567889999999999886 69999997641 112222 2233333333 3333345567899999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHh
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYA 1213 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~ 1213 (1230)
|||++||||++.+|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999875 48899999999999865 7999999999999999999
Q ss_pred HHhhc
Q 000909 1214 QLTHM 1218 (1230)
Q Consensus 1214 eLl~~ 1218 (1230)
++.+.
T Consensus 230 ~~~~~ 234 (250)
T PRK11264 230 ALFAD 234 (250)
T ss_pred HHhcC
Confidence 98765
No 297
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-41 Score=378.45 Aligned_cols=213 Identities=28% Similarity=0.442 Sum_probs=182.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecC--CCChHHHhhc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVR--ELDVHWYRKH 1069 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~~~~lR~~ 1069 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 35999999999999999999999999999999999999999999999999985 3445678899
Q ss_pred ceEEccccc--CCcccHHHHhccCC--CCCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1070 TALVSQEPV--IYAGNIRDNIVFGK--LDASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1070 i~~VpQdp~--Lf~gTIreNl~~g~--~~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
++||||+|. ++..|+.+|+.++. ...+. +++.++++..++.++. .....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHH
Confidence 999999985 67789999997641 12222 2344556666665442 23356799999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||||+.+|+||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999874 48899999999999865 899999999999999999998764
No 298
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-41 Score=374.24 Aligned_cols=218 Identities=28% Similarity=0.449 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCCC--Ch
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVREL--DV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3599999999999999999999999999999999999985 799999999999653 34
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++|+||++.+|..|+++|+.++.. .. + .+++.++++.+++.+.+.. ........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 567899999999999999999999986521 11 1 2345566777766443322 23345678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999865 799999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 765
No 299
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.2e-41 Score=371.07 Aligned_cols=216 Identities=25% Similarity=0.424 Sum_probs=186.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH-Hhhhe
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW-VRREM 433 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~-~r~~i 433 (1230)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999963 35999999999999999999999999999999999999999999999999998776654 35679
Q ss_pred EEEccCccccch-hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
+|++|++.+|++ |++||+.++.+. ...++. ...+.+.++.+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKER-----EEKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 999999875321 111111 12234556666 77777788889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+|++|||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998764 58999999999988765 99999999999999999988754
No 300
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.8e-41 Score=376.86 Aligned_cols=222 Identities=31% Similarity=0.473 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH
Q 000909 992 IEMRRVDFAYPSR------PDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW 1065 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~ 1065 (1230)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 1346999999999999999999999999999999999999999999999999998876543
Q ss_pred ---HhhcceEEccccc--CC-cccHHHHhccCCC---CC----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCC
Q 000909 1066 ---YRKHTALVSQEPV--IY-AGNIRDNIVFGKL---DA----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLS 1132 (1230)
Q Consensus 1066 ---lR~~i~~VpQdp~--Lf-~gTIreNl~~g~~---~~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1132 (1230)
+|++++|+||+|. ++ ..|++||+.++.. .. .++++.++++..++.+ ......+..||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhCC
Confidence 6788999999983 44 3699999964311 11 1233444444444421 12344567899
Q ss_pred hhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEe
Q 000909 1133 GGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVER 1209 (1230)
Q Consensus 1133 gGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~ 1209 (1230)
||||||++||||++++|++|||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998753 7899999999999975 799999999999999
Q ss_pred cCHhHHhhcccccH
Q 000909 1210 GTYAQLTHMRGAFF 1223 (1230)
Q Consensus 1210 Gt~~eLl~~~g~y~ 1223 (1230)
|++++++.....|.
T Consensus 233 g~~~~~~~~~~~~~ 246 (265)
T TIGR02769 233 CDVAQLLSFKHPAG 246 (265)
T ss_pred CCHHHHcCCCCHHH
Confidence 99999987544333
No 301
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=370.12 Aligned_cols=219 Identities=23% Similarity=0.365 Sum_probs=181.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH-Hhhc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW-YRKH 1069 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~ 1069 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... +|++
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 3899999999963 35999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred ceEEcccccCCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccC
Q 000909 1070 TALVSQEPVIYAG-NIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRN 1148 (1230)
Q Consensus 1070 i~~VpQdp~Lf~g-TIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~ 1148 (1230)
++|+||++.+|.+ |+++|+.++....+.++..+.+ .+.++.++. ++.........||||||||++||||++++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~~-l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFPR-LHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHHH-HHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 9999998753222222222211 111222211 11112234568999999999999999999
Q ss_pred CCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1149 PTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1149 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999865 4899999999999765 5799999999999999999999754
No 302
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-41 Score=377.65 Aligned_cols=218 Identities=25% Similarity=0.431 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 359999999999999999999999999999999999987 699999999999853 455
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CCCH-----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DASE-----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~sd-----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++|+||+|.+|..|++||+.++.. +.++ +.+.++++..++.+ ++.......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-------ELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hHHHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 2222 12334444443322 222334456778999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 799999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
...
T Consensus 254 ~~~ 256 (271)
T PRK14238 254 FSN 256 (271)
T ss_pred HcC
Confidence 865
No 303
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-41 Score=376.64 Aligned_cols=221 Identities=28% Similarity=0.456 Sum_probs=188.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
-|+++||+++|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743234599999999999999999999999999999999999999999999999999877777788999
Q ss_pred EEEccCcc--ccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 434 GLVSQEHA--LFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 434 ~~v~Q~~~--l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
+|++|+|. ++..|+.|||.++.. ..+.++..+. +.+.++.+ |+..........||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lAraL~ 156 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKR-----VDEALLAV--NMLDFKTREPARLSGGQKQRVAVAGIIA 156 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 567899999987532 1223332221 12233333 5555566677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhh
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
++|+++||||||++||+.+.+.+.+.++++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 157 ~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 157 LRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999987643 8999999999999988999999999999999999998763
No 304
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=372.77 Aligned_cols=213 Identities=23% Similarity=0.441 Sum_probs=180.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecC------CCChHH
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVR------ELDVHW 1065 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~------~i~~~~ 1065 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 35999999999999999999999999999999999999999999999999873 123457
Q ss_pred HhhcceEEcccccCCcc-cHHHHhccCC---CCCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1066 YRKHTALVSQEPVIYAG-NIRDNIVFGK---LDASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1066 lR~~i~~VpQdp~Lf~g-TIreNl~~g~---~~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
+|++++|+||+|.+|.+ |++||+.++. .+... +++.++++..++.++ ......+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPY-----------ADRFPLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHH
Confidence 78899999999999975 9999996421 11222 223334444444333 34445689999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
|++||||++++|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999875 48999999999999865 899999999999999999998
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
.+.
T Consensus 229 ~~~ 231 (242)
T PRK11124 229 TQP 231 (242)
T ss_pred cCc
Confidence 654
No 305
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-41 Score=385.20 Aligned_cols=224 Identities=26% Similarity=0.413 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCC-------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh
Q 000909 991 KIEMRRVDFAYPSRP-------DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~-------~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~ 1063 (1230)
-|+++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+.+++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 389999999996321 2369999999999999999999999999999999999999999999999999998875
Q ss_pred H---HHhhcceEEccccc--CCc-ccHHHHhccC---CCCCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCC
Q 000909 1064 H---WYRKHTALVSQEPV--IYA-GNIRDNIVFG---KLDAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQ 1130 (1230)
Q Consensus 1064 ~---~lR~~i~~VpQdp~--Lf~-gTIreNl~~g---~~~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~ 1130 (1230)
. .+|++++||||||. |+. -|+.+|+..+ ..... .+++.++++.+++.+ ..++. ....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~----~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDR----YPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcC----CCcc
Confidence 3 56789999999993 554 4899888531 11112 234566666666632 12333 3467
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEE
Q 000909 1131 LSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVV 1207 (1230)
Q Consensus 1131 LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv 1207 (1230)
||||||||++|||||+.+|++||+||||++||..+.+.|.+.|++..+ |.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 8999999999999975 8999999999999
Q ss_pred EecCHhHHhhcc-cccHH
Q 000909 1208 ERGTYAQLTHMR-GAFFN 1224 (1230)
Q Consensus 1208 e~Gt~~eLl~~~-g~y~~ 1224 (1230)
|.|++++++++. ..|.+
T Consensus 235 e~g~~~~~~~~p~hpyt~ 252 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQ 252 (327)
T ss_pred EECCHHHHhcCCCCHHHH
Confidence 999999999763 34544
No 306
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-41 Score=380.79 Aligned_cols=220 Identities=25% Similarity=0.426 Sum_probs=182.6
Q ss_pred cCcEEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC----C-
Q 000909 989 SGKIEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE----L- 1061 (1230)
Q Consensus 989 ~g~I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----i- 1061 (1230)
.|.|+++||+++|++++ ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999997432 1359999999999999999999999999999999999999999999999999852 2
Q ss_pred ChHHHhhcceEEcccc--cCCcccHHHHhccCCC--CCCHHHHH----HHHHHhchHHHHHhccccccccccCCCCCCCh
Q 000909 1062 DVHWYRKHTALVSQEP--VIYAGNIRDNIVFGKL--DASENEVV----EAARAANAHEFISSLKDGYETECGERGVQLSG 1133 (1230)
Q Consensus 1062 ~~~~lR~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~ei~----~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1133 (1230)
+...+|++++|+||+| .+|..|++||+.++.. ....++.. +.++..++ |.+ ........|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~~---~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQL-------PED---YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------Chh---HhcCChhhCCH
Confidence 4567888999999998 4778899999987532 22333322 22222222 211 22345678999
Q ss_pred hHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEec
Q 000909 1134 GQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERG 1210 (1230)
Q Consensus 1134 GQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~G 1210 (1230)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999875 3789999999999875 57999999999999999
Q ss_pred CHhHHhhc
Q 000909 1211 TYAQLTHM 1218 (1230)
Q Consensus 1211 t~~eLl~~ 1218 (1230)
+++++++.
T Consensus 234 ~~~~~~~~ 241 (289)
T PRK13645 234 SPFEIFSN 241 (289)
T ss_pred CHHHHhcC
Confidence 99988653
No 307
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.2e-41 Score=367.54 Aligned_cols=201 Identities=31% Similarity=0.490 Sum_probs=174.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChH---HHhh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVH---WYRK 1068 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~ 1068 (1230)
|+++|++++|+. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.|+.+++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999887643 4688
Q ss_pred cceEEcccccCCc-ccHHHHhccCCC------CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1069 HTALVSQEPVIYA-GNIRDNIVFGKL------DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~-gTIreNl~~g~~------~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
+++|+||+|.+|. .|++||+.++.. ...+++++++++..++.++..+. ..+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAF-----------PEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHH
Confidence 9999999999986 699999986421 11234567777777776654433 34799999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcE
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGR 1205 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~ 1205 (1230)
||||+++|++|||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999874 48999999999999986 79999999985
No 308
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-41 Score=374.25 Aligned_cols=219 Identities=24% Similarity=0.442 Sum_probs=187.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCCC--Ch
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVREL--DV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||.+||+||||||||||+++|.|+.+| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 3599999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
...|+.++|+||+|.+|+.|++||+.++.. +. . ++.+.++++..++.+.+ .+..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEV-------KDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhh-------HHHhhcChhhCCHHHH
Confidence 677889999999999999999999987521 11 1 22345555555554332 2334566778999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++.+|+++||||||++||+++...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999964 899999999999999999999
Q ss_pred hhcc
Q 000909 1216 THMR 1219 (1230)
Q Consensus 1216 l~~~ 1219 (1230)
.++.
T Consensus 236 ~~~~ 239 (253)
T PRK14261 236 FENP 239 (253)
T ss_pred HhCC
Confidence 8653
No 309
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5e-41 Score=369.93 Aligned_cols=216 Identities=28% Similarity=0.489 Sum_probs=186.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+... ++.++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 45999999999999999999999999999999999999999999999999998766544 45899
Q ss_pred EEccCcccc-chhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALF-GTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~-~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|++|++.++ ..|++||+.++.. ....++. ...+.+.++.+ |++...+..+.+||||||||++||||++++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEA-----RERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999875 5699999986532 1112211 12234556666 777778888899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhh
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|+++||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999998864 48999999999999988999999999999999999988763
No 310
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.2e-41 Score=366.59 Aligned_cols=201 Identities=33% Similarity=0.560 Sum_probs=172.5
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceE
Q 000909 993 EMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTAL 1072 (1230)
Q Consensus 993 ~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1072 (1230)
+++||+++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999642 2469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred Ecccc--cCCcccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1073 VSQEP--VIYAGNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1073 VpQdp--~Lf~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
+||+| .++..|+++|+.++.. ..+ ++++.+.++..++.+++ ......||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLR-----------DRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHHHHHH
Confidence 99998 3678899999986421 122 22344555555554443 33456899999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcE
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGR 1205 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~ 1205 (1230)
|+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999875 47999999999999987 89999999985
No 311
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-41 Score=375.43 Aligned_cols=220 Identities=30% Similarity=0.458 Sum_probs=185.1
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCC--C
Q 000909 352 RGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRR--L 424 (1230)
Q Consensus 352 ~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~--~ 424 (1230)
.+.|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 357999999999963 4599999999999999999999999999999999999975 89999999999865 3
Q ss_pred CHHHHhhheEEEccCccccchhHHHHHhcCCC--CC--CHHHHHHHHHHHhHHHHHHhCCCcc----cchhcCCCCCCCh
Q 000909 425 QLKWVRREMGLVSQEHALFGTSIKDNIMFGKL--DA--TMDEVIAAATAANAHNFIRQLPEGY----ETKVGERGALLSG 496 (1230)
Q Consensus 425 ~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~--~~~~~~~~~~~~~~~~~i~~l~~g~----~t~~~~~g~~LSg 496 (1230)
+...+|+.++|++|++.+|+.|++||+.++.. .. ...+..+ .+.+.++.+ |+ .+..++.+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDE-----IVETSLRKA--GLWEEVKDRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHH-----HHHHHHHHc--CCchhhhHHhhCCcccCCH
Confidence 45667889999999999998899999987531 10 1111111 112223333 33 2345677889999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecCh
Q 000909 497 GQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTH 575 (1230)
Q Consensus 497 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 575 (1230)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987668899999999999965 999999999999999999
Q ss_pred hHHHhh
Q 000909 576 NDLINR 581 (1230)
Q Consensus 576 ~~l~~~ 581 (1230)
+++...
T Consensus 247 ~~~~~~ 252 (267)
T PRK14235 247 EKMFTN 252 (267)
T ss_pred HHHHhC
Confidence 998753
No 312
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=385.00 Aligned_cols=225 Identities=24% Similarity=0.361 Sum_probs=184.1
Q ss_pred EEEEEEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc----CCCCeEEECCeecCCCChHHH
Q 000909 992 IEMRRVDFAYPSRPD-ALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD----VEQGSVRVDGMDVRELDVHWY 1066 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~~~~l 1066 (1230)
|+++||+++|+.+.. .++|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999974322 359999999999999999999999999999999999998 489999999999999987766
Q ss_pred hh----cceEEccccc--CCc-ccHHHHhc----cCCC---CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCC
Q 000909 1067 RK----HTALVSQEPV--IYA-GNIRDNIV----FGKL---DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLS 1132 (1230)
Q Consensus 1067 R~----~i~~VpQdp~--Lf~-gTIreNl~----~g~~---~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1132 (1230)
|+ +++||||+|. ++. -|+.+|+. .... ....+++.++++.+++.+... .....+.+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPAS--------RLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH--------HHhCCchhCC
Confidence 54 6999999995 433 35655543 2111 112344666777777643211 1234567899
Q ss_pred hhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEe
Q 000909 1133 GGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVER 1209 (1230)
Q Consensus 1133 gGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~ 1209 (1230)
||||||++|||||+.+|++||+||||++||+.+...+.+.|+++. .|.|+|+|||+++.+. .||||+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999999875 3789999999999985 5899999999999999
Q ss_pred cCHhHHhhc-ccccHH
Q 000909 1210 GTYAQLTHM-RGAFFN 1224 (1230)
Q Consensus 1210 Gt~~eLl~~-~g~y~~ 1224 (1230)
|++++++++ ...|.+
T Consensus 236 g~~~~~~~~p~hpyt~ 251 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQ 251 (326)
T ss_pred CCHHHHhhCCCChHHH
Confidence 999999976 334543
No 313
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-41 Score=369.70 Aligned_cols=205 Identities=33% Similarity=0.474 Sum_probs=174.5
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
|+++|++++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996311 1469999999999999999999999999999999999999999999999999863 46789
Q ss_pred eEEcccccCCc-ccHHHHhccCCC--CC----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYA-GNIRDNIVFGKL--DA----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~-gTIreNl~~g~~--~~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+||||+|.+|. .|++||+.++.. .. .++++.++++..++.++..+ ...+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENA-----------YPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CcccCCHHHHHHHHHHH
Confidence 99999999987 699999976421 11 12345666666666554433 33579999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEe--CcEEEEecCH
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVA--DGRVVERGTY 1212 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~--~G~Ive~Gt~ 1212 (1230)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|+ +|++++.++-
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999864 3789999999999876 479999999 7999998764
No 314
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=389.01 Aligned_cols=222 Identities=29% Similarity=0.473 Sum_probs=189.4
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
..|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||.++.+.+. .++.
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 358999999999999999999999999999999999999999999999999987664 4678
Q ss_pred eEEEccCccccch-hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
||||+|++.+|+. |++|||.|+... .+..+..+ .+.+.++.+ |+.........+||||||||++|||||+
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~ 165 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLA 165 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999976 999999987431 12222211 223445555 6766677888899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHH
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHY 586 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 586 (1230)
.+|++||||||||+||+.+++.+.+.++++. .|.|+|+|||+++.+.. ||+|++|++|++++.|+++|+..++...|
T Consensus 166 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~ 245 (377)
T PRK11607 166 KRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRY 245 (377)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHH
Confidence 9999999999999999999999988887653 47999999999999755 99999999999999999999987544333
No 315
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.9e-41 Score=366.68 Aligned_cols=202 Identities=31% Similarity=0.459 Sum_probs=173.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh---HHHhh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV---HWYRK 1068 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1068 (1230)
|+++||+++|+++ +++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999632 359999999999999999999999999999999999999999999999999987754 35788
Q ss_pred cceEEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1069 HTALVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
+++||||+|.+|. .|++||+.++.. ..+ ++++.++++..++.+.... ...+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRA-----------LPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhcCHHHHHHHHH
Confidence 9999999999998 499999986421 112 2345566666666554332 335799999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEE
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRV 1206 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~I 1206 (1230)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 58999999999999986 799999999974
No 316
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-41 Score=377.61 Aligned_cols=218 Identities=28% Similarity=0.471 Sum_probs=186.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecC--CCCHHHHhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIR--RLQLKWVRR 431 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~--~~~~~~~r~ 431 (1230)
-|+++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+++
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 245999999999999999999999999999999999999999999999999985 334567888
Q ss_pred heEEEccCc--cccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 432 EMGLVSQEH--ALFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 432 ~i~~v~Q~~--~l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
.++|++|++ .+++.|++||+.++... .+.++..+ .+.+.++.+ |+.......+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRK-----RVDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 56788999999875321 22222211 122334555 67666778889999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-ccCEEEEEeCCeEEEecChhHHHh
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVR-NADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|+.+|++|||||||++||+.+...+.+.++++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999988643 899999999999987 499999999999999999999876
No 317
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=336.65 Aligned_cols=219 Identities=28% Similarity=0.468 Sum_probs=187.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
+++.+++++|++ ...+++||||+++.||+++|.|||||||||++++|..++.|++|+|++||.|....+ ...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcc
Confidence 678999999975 334899999999999999999999999999999999999999999999999987654 56788999
Q ss_pred EEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPV 513 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ 513 (1230)
+++-+..++.. |++|||.|... ...+...--++...+..+.| +++..+..+..++|-|+||||+|||||++||+
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~---L~~l~~~~~kari~~l~k~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~ 153 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFAR---LNGLSRKEIKARIAELSKRL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDPS 153 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHH---HhhhhhhHHHHHHHHHHHHh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCCC
Confidence 99988888865 99999996421 11111111123333445555 77777778888899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 514 ILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 514 illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+++||||||+||..+.+.+.+.+.+.+ .|+++|+.||.++.++. ||+++++.+|+++..|+.+++.+.
T Consensus 154 i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 154 ILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred eEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999999999876 49999999999999985 999999999999999999998764
No 318
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-41 Score=372.04 Aligned_cols=204 Identities=28% Similarity=0.434 Sum_probs=178.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 4999999999963 35999999999999999999999999999999999999999999999998763 467899
Q ss_pred eEEcccccCCc-ccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000909 1071 ALVSQEPVIYA-GNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNP 1149 (1230)
Q Consensus 1071 ~~VpQdp~Lf~-gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p 1149 (1230)
+|+||+|.+|. .|++||+.++.....++++.++++..++.++. .....+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 69999998753222345666777777765543 3345689999999999999999999
Q ss_pred CEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHh
Q 000909 1150 TILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYA 1213 (1230)
Q Consensus 1150 ~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~ 1213 (1230)
++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998864 3799999999999985 47999999999999988754
No 319
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=367.18 Aligned_cols=214 Identities=28% Similarity=0.437 Sum_probs=182.1
Q ss_pred cEEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH---H
Q 000909 354 EIEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW---V 429 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~---~ 429 (1230)
-++++||+|+|+++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997422 146999999999999999999999999999999999999999999999999998877643 3
Q ss_pred h-hheEEEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 430 R-REMGLVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 430 r-~~i~~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
+ +.++|++|++.+|+. |++||+.++.. ....++.. ..+.+.++.+ |++....+...+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN-----SRALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 679999999998875 99999987421 11122211 1233455555 777777888899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCCeEEEecC
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGT 574 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 574 (1230)
||++.+|+++||||||++||+.+...+.+.|++.. +|+|+|++||+++.+..+|++++|++|++++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999998863 4899999999999998889999999999998775
No 320
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.3e-41 Score=368.43 Aligned_cols=208 Identities=35% Similarity=0.508 Sum_probs=176.7
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH----HH
Q 000909 355 IEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK----WV 429 (1230)
Q Consensus 355 i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~----~~ 429 (1230)
|+++||+++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 14699999999999999999999999999999999999999999999999999877643 24
Q ss_pred hhheEEEccCccccch-hHHHHHhcCCCCC--CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 430 RREMGLVSQEHALFGT-SIKDNIMFGKLDA--TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 430 r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
+++++|++|++.+|.. |++||+.++.... ...+. ...+.+.++.+ |++......+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5789999999999876 9999999863211 11111 12334556666 7777778888899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhccCEEEEEeCCeE
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRNADLIAVVDNGCL 569 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i 569 (1230)
|++.+|+++||||||++||+.+.+.+.+.+++..+ ++|+|++||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998653 8999999999999888999999999974
No 321
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.3e-41 Score=382.09 Aligned_cols=217 Identities=25% Similarity=0.444 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 5999999999963 45999999999999999999999999999999999999999999999999997654 3578899
Q ss_pred EEEccCccccc-hhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFG-TSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~-~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
|||||++.++. .|++||+.+... ..+..+..+ .+.+.++.+ |+.........+||||||||++|||||+.
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~~ 155 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARA-----LVPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALVN 155 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHhC
Confidence 99999999886 599999985321 112222221 122334443 55444555667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+|++|+|||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 156 ~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 156 DPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999999999999999999999999864 48999999999999976 999999999999999999998753
No 322
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-41 Score=375.12 Aligned_cols=219 Identities=28% Similarity=0.416 Sum_probs=187.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCCCC-hH
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRELD-VH 1064 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~-~~ 1064 (1230)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999963 4699999999999999999999999999999999999986 6999999999998763 45
Q ss_pred HHhhcceEEcccccCCcccHHHHhccCCC---CCCHHHHH----HHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1065 WYRKHTALVSQEPVIYAGNIRDNIVFGKL---DASENEVV----EAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1065 ~lR~~i~~VpQdp~Lf~gTIreNl~~g~~---~~sd~ei~----~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
.+|++++|+||+|.+|+.|+++|+.++.. ..++++.. +.++..++.+. +++.+...+.+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDA-------VKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhCCcccCCHHHHH
Confidence 67899999999999999999999986521 12444432 33344444322 223345667789999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
|++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999865 7999999999999999999998
Q ss_pred hcc
Q 000909 1217 HMR 1219 (1230)
Q Consensus 1217 ~~~ 1219 (1230)
+.+
T Consensus 251 ~~~ 253 (276)
T PRK14271 251 SSP 253 (276)
T ss_pred hCc
Confidence 753
No 323
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-41 Score=374.85 Aligned_cols=219 Identities=28% Similarity=0.463 Sum_probs=188.3
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCC--CC
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRE--LD 1062 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 1062 (1230)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||+++.+ .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36999999999963 3599999999999999999999999999999999999985 48999999999864 45
Q ss_pred hHHHhhcceEEcccccCCcccHHHHhccCCC------CCC-HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhH
Q 000909 1063 VHWYRKHTALVSQEPVIYAGNIRDNIVFGKL------DAS-ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQ 1135 (1230)
Q Consensus 1063 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~------~~s-d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1135 (1230)
...+|++++|+||+|.+|+.|++||+.++.. +.. ++.+.++++.+++.+++..+ ....+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK-------LNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHH
Confidence 5678899999999999999999999986421 111 23355677777776554322 234567899999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe-----CcEEEEe
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVA-----DGRVVER 1209 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~-----~G~Ive~ 1209 (1230)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998778999999999999875 79999998 5999999
Q ss_pred cCHhHHhhc
Q 000909 1210 GTYAQLTHM 1218 (1230)
Q Consensus 1210 Gt~~eLl~~ 1218 (1230)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999999765
No 324
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-41 Score=378.24 Aligned_cols=218 Identities=25% Similarity=0.456 Sum_probs=182.5
Q ss_pred cEEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCC----ChH
Q 000909 991 KIEMRRVDFAYPSRP--DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVREL----DVH 1064 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~ 1064 (1230)
.|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 14699999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhhcceEEcccc--cCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1065 WYRKHTALVSQEP--VIYAGNIRDNIVFGKL--DASENE----VVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1065 ~lR~~i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..|+.++|+||+| .+|..|++||+.++.. ..+.++ +.++++..++.. ........+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSE----------DLISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhhCCcccCCHHHH
Confidence 6788999999998 5888899999986421 222222 334444444421 122345668999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQ 1214 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~e 1214 (1230)
||++|||||+.+|++|||||||++||+++...+.+.|++.. +|.|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKE 231 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999875 4789999999999985 589999999999999999999
Q ss_pred Hhhc
Q 000909 1215 LTHM 1218 (1230)
Q Consensus 1215 Ll~~ 1218 (1230)
+.+.
T Consensus 232 ~~~~ 235 (287)
T PRK13641 232 IFSD 235 (287)
T ss_pred HhcC
Confidence 8754
No 325
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6.1e-41 Score=368.99 Aligned_cols=211 Identities=29% Similarity=0.461 Sum_probs=182.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|++ .++|+|+||+|.+||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+. .|+.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999963 359999999999999999999999999999999999999999999999999987653 478899
Q ss_pred EEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||+|.+|.+ |++||+.++.. ..+ ++++.++++..++.++.+ ....+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGD-----------RYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999975 99999986532 111 234455556665544433 3345799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
++++|+++||||||++||+++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998654 7999999999999865 799999999999999999999864
No 326
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-41 Score=374.09 Aligned_cols=218 Identities=28% Similarity=0.442 Sum_probs=188.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 359999999999999999999999999999999999986 479999999999853 456
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CC---CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA---SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~---sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
..+|++++|+||+|.+|+.|+++|+.++.. .. .++++.++++.+++.+++.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 678899999999999998999999987532 11 13345566777777655532 2345567899999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe---------CcEEEE
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVA---------DGRVVE 1208 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~---------~G~Ive 1208 (1230)
++||||++++|+||||||||++||+++...+.+.|++..+++|+|++||+++.+.. ||+|++|+ +|+|++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999998864 69999998 899999
Q ss_pred ecCHhHHhhc
Q 000909 1209 RGTYAQLTHM 1218 (1230)
Q Consensus 1209 ~Gt~~eLl~~ 1218 (1230)
.|+++|+.+.
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999999865
No 327
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-41 Score=390.31 Aligned_cols=214 Identities=28% Similarity=0.491 Sum_probs=185.5
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhc
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKH 1069 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1069 (1230)
..|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+. .|++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 359999999999999999999999999999999999999999999999999987764 4789
Q ss_pred ceEEcccccCCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHH
Q 000909 1070 TALVSQEPVIYAG-NIRDNIVFGKL--DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIA 1142 (1230)
Q Consensus 1070 i~~VpQdp~Lf~g-TIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalA 1142 (1230)
++||+|++.+|.. |++||+.|+.. ..+. +++.++++..++.++.+ ....+||||||||+|||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAK-----------RKPHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHH
Confidence 9999999999975 99999998632 2222 34556666666655433 33457999999999999
Q ss_pred HHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1143 RAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1143 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
|||+++|++||||||||+||+.+...+.+.|++.. .+.|+|+|||+++.+. .||+|++|++|++++.|+|+++..+.
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999998887764 3789999999999865 58999999999999999999998763
No 328
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-41 Score=375.48 Aligned_cols=219 Identities=34% Similarity=0.545 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
-++++||+++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 34699999999999999999999999999999999999999999999999999888877788899
Q ss_pred EEEccCc--cccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 434 GLVSQEH--ALFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 434 ~~v~Q~~--~l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
+|++|++ .+++.|++|||.++... .+.++..+ .+.+.+..+ |++..+.....+||||||||++|||||+
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~laral~ 156 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQV--GMEDFLNREPHRLSGGQKQRVAIAGVLA 156 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 45677999999986321 12222211 122334444 6666667777899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHh
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 157 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 157 LQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999988653 899999999999998899999999999999999998875
No 329
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-41 Score=376.89 Aligned_cols=222 Identities=31% Similarity=0.458 Sum_probs=184.3
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH----hh
Q 000909 356 EFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV----RR 431 (1230)
Q Consensus 356 ~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~----r~ 431 (1230)
.++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45678888853 458999999999999999999999999999999999999999999999999987765443 46
Q ss_pred heEEEccCccccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 432 EMGLVSQEHALFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
+++|++|++.+|. .|++||+.++... ....+.. ..+.+.++.+ |++..+.....+||||||||++||||+
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAERE-----ERAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 8999999999885 5999999875211 1111111 1223445555 666666777789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcH
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGH 585 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 585 (1230)
+.+|++|||||||++||+.+.+.+.+.|.+.. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+.....
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~ 255 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPAND 255 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcH
Confidence 99999999999999999999999999998864 38999999999999865 9999999999999999999997654444
Q ss_pred HH
Q 000909 586 YA 587 (1230)
Q Consensus 586 ~~ 587 (1230)
|.
T Consensus 256 ~~ 257 (269)
T cd03294 256 YV 257 (269)
T ss_pred HH
Confidence 43
No 330
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=6.2e-41 Score=375.16 Aligned_cols=220 Identities=30% Similarity=0.431 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCC------CCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH-
Q 000909 355 IEFEHVKFSYPSR------PDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK- 427 (1230)
Q Consensus 355 i~~~~v~~~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~- 427 (1230)
|+++||+|+|++. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 135699999999999999999999999999999999999999999999999999877654
Q ss_pred --HHhhheEEEccCcc--cc-chhHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhH
Q 000909 428 --WVRREMGLVSQEHA--LF-GTSIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQ 498 (1230)
Q Consensus 428 --~~r~~i~~v~Q~~~--l~-~~ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq 498 (1230)
.+|+.|+|++|++. ++ ..|++||+.++.. ....++ ....+.+.++.+ |++ ...+..+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 36778999999983 44 3699999975421 111111 112234556666 775 45677888999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecCh
Q 000909 499 KQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTH 575 (1230)
Q Consensus 499 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 575 (1230)
|||++||||++.+|++|||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 999999999999999999999999999999999999998864 38999999999999975 999999999999999999
Q ss_pred hHHHhh
Q 000909 576 NDLINR 581 (1230)
Q Consensus 576 ~~l~~~ 581 (1230)
+++...
T Consensus 236 ~~~~~~ 241 (265)
T TIGR02769 236 AQLLSF 241 (265)
T ss_pred HHHcCC
Confidence 999864
No 331
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5.9e-41 Score=375.89 Aligned_cols=227 Identities=25% Similarity=0.371 Sum_probs=189.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH---HHh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK---WVR 430 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~---~~r 430 (1230)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 5899999999963 4599999999999999999999999999999999999999999999999999876543 357
Q ss_pred hheEEEccCccccch-hHHHHHhcCCCC---CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 431 REMGLVSQEHALFGT-SIKDNIMFGKLD---ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
++++|++|++.+|+. |++||+.++... .+.++. ...+.+.++.+ |++........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLL-----HSTVMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999976 999999864211 111111 11223344555 6666667778899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcC
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRID 583 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 583 (1230)
|++.+|+++||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+...
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 236 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPD 236 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCc
Confidence 9999999999999999999999999999998864 37999999999999876 99999999999999999999876433
Q ss_pred cHHHHHH
Q 000909 584 GHYAKMA 590 (1230)
Q Consensus 584 ~~~~~~~ 590 (1230)
..+..++
T Consensus 237 ~~~~~~~ 243 (269)
T PRK11831 237 PRVRQFL 243 (269)
T ss_pred HHHHHHH
Confidence 3334433
No 332
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-41 Score=371.95 Aligned_cols=217 Identities=29% Similarity=0.513 Sum_probs=188.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--CChH
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--LDVH 1064 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~~ 1064 (1230)
|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|+.+ |++|+|.+||.+++. .+..
T Consensus 4 l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 4 IEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 789999999963 459999999999999999999999999999999999975 489999999999875 3466
Q ss_pred HHhhcceEEcccccCCcccHHHHhccCC--CCC-C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1065 WYRKHTALVSQEPVIYAGNIRDNIVFGK--LDA-S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1065 ~lR~~i~~VpQdp~Lf~gTIreNl~~g~--~~~-s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
.+|++++|+||+|.+|.+|+++|+.++. .+. + ++++.++++.+++.+++..+ ....+.+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHHH
Confidence 7899999999999999999999998642 111 1 23456677777876665432 23456789999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
|+|||||++++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. +|+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999998876 5999999999999999999997
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
..
T Consensus 234 ~~ 235 (250)
T PRK14266 234 IN 235 (250)
T ss_pred hC
Confidence 65
No 333
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=5.1e-41 Score=365.74 Aligned_cols=211 Identities=27% Similarity=0.477 Sum_probs=179.6
Q ss_pred EEEEEEEEECCCCCC-CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 355 IEFEHVKFSYPSRPD-SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
|+++||+++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ...++++++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 159999999999999999999999999999999999999999999999999875 345678899
Q ss_pred EEEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
+|++|++.+|+. |++||+.+... ....++.. ..+.+.++.+ |++......+.+||||||||++||||++.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELT-----ARLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999985 99999986421 11122211 1233455555 77777788889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
+|+++||||||++||+.+.+.+.+.+++.. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999998864 58999999999999865 9999999999998764
No 334
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-41 Score=369.96 Aligned_cols=211 Identities=32% Similarity=0.499 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|+. .++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+++.+.+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 478999999963 359999999999999999999999999999999999999999999999999987664 368899
Q ss_pred EEcccccCCcc-cHHHHhccCCC--C----CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGKL--D----ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~~--~----~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||+|.+|.+ |+++|+.++.. . ..++++.++++..++.+++... ..+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRK-----------PSQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999999975 99999975421 1 1234556666767776655443 35899999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
++++|++|||||||++||+.+.+.+.+.+++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998753 8999999999999865 799999999999999999999865
No 335
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-41 Score=373.53 Aligned_cols=220 Identities=30% Similarity=0.426 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecC--CCCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIR--RLQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~--~~~~ 426 (1230)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999987 4455
Q ss_pred HHHhhheEEEccCccccch-hHHHHHhcCCC--C--CCHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHH
Q 000909 427 KWVRREMGLVSQEHALFGT-SIKDNIMFGKL--D--ATMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQK 499 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~--~--~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqk 499 (1230)
..+|++++|++|++.+|+. |++||+.++.. . ...++..+. +.+.++.+ ...+.......+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~ 155 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDER-----VEWALKKAALWDEVKDRLNDYPSNLSGGQR 155 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHH-----HHHHHHHcCCccchhhhhccChhhCCHHHH
Confidence 6678899999999999976 99999987531 1 012221111 12223332 11122345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||++||||++++|+++||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (253)
T PRK14267 156 QRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKV 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999865 999999999999999999998
Q ss_pred Hhh
Q 000909 579 INR 581 (1230)
Q Consensus 579 ~~~ 581 (1230)
.+.
T Consensus 236 ~~~ 238 (253)
T PRK14267 236 FEN 238 (253)
T ss_pred HhC
Confidence 764
No 336
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=8e-41 Score=363.85 Aligned_cols=210 Identities=30% Similarity=0.447 Sum_probs=187.0
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh----HHHhh
Q 000909 993 EMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV----HWYRK 1068 (1230)
Q Consensus 993 ~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~----~~lR~ 1068 (1230)
.+.|+.|+|+.+ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 567999999743 469999999999999999999999999999999999999999999999999876543 34567
Q ss_pred cceEEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccC
Q 000909 1069 HTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRN 1148 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~ 1148 (1230)
.++|+||+|.+|+.|++||+.++.+ ..+++..++++..++.+++..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999987643 345667788899999999999999999999888999999999999999999999
Q ss_pred CCEEEeecccCCcCHHHHHHHHH--HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCcE
Q 000909 1149 PTILLLDEATSALDVQSEQVVQE--ALDRIM-MGRTTIVVAHRLNTIKKLDSIALVADGR 1205 (1230)
Q Consensus 1149 p~ILlLDEaTSaLD~~te~~I~~--~l~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~ 1205 (1230)
|++|||||||++||+.+...+.+ .++... .+.|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999888877 454443 3789999999999999999999999984
No 337
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=371.21 Aligned_cols=213 Identities=28% Similarity=0.451 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+++...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999963 35999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEcccccC-CcccHHHHhccCCC-C-C----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVI-YAGNIRDNIVFGKL-D-A----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~L-f~gTIreNl~~g~~-~-~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||++.+ +..|++||+.++.. . . .++++.++++..++.+.. ......||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLA-----------GRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHh-----------cCCcccCCHHHHHHHHHHHH
Confidence 99999987 67899999987532 1 1 123455666666665433 23456899999999999999
Q ss_pred Hc------cCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHH
Q 000909 1145 II------RNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1145 ll------~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
|+ .+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 4789999999999987 5899999999999999999998
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
.+.
T Consensus 229 ~~~ 231 (258)
T PRK13548 229 LTP 231 (258)
T ss_pred hCh
Confidence 764
No 338
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-41 Score=371.49 Aligned_cols=218 Identities=28% Similarity=0.475 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecC-CCChH
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVR-ELDVH 1064 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~-~i~~~ 1064 (1230)
.++++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4899999999963 4599999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HHhhcceEEcccccCCcccHHHHhccCCC--CCC-----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHH
Q 000909 1065 WYRKHTALVSQEPVIYAGNIRDNIVFGKL--DAS-----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQ 1137 (1230)
Q Consensus 1065 ~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~s-----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1137 (1230)
.+|+.++|+||+|.+|..|+++|+.++.. ... ++++.++++.+++.+.+. +........|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 88999999999999999999999986521 111 223445566666654332 2234456789999999
Q ss_pred HHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1138 RIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1138 rlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
|++||||++.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 7999999999999999999987
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
.+
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 54
No 339
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=370.89 Aligned_cols=218 Identities=29% Similarity=0.417 Sum_probs=184.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCCCCHHH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRRLQLKW 428 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~~~~~~ 428 (1230)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 3599999999999999999999999999999999999984 6999999999998888778
Q ss_pred HhhheEEEccCcccc-chhHHHHHhcCCCC----CCHHHHHHHHHHHhHHHHHHhCCCcc----cchhcCCCCCCChhHH
Q 000909 429 VRREMGLVSQEHALF-GTSIKDNIMFGKLD----ATMDEVIAAATAANAHNFIRQLPEGY----ETKVGERGALLSGGQK 499 (1230)
Q Consensus 429 ~r~~i~~v~Q~~~l~-~~ti~~Ni~~~~~~----~~~~~~~~~~~~~~~~~~i~~l~~g~----~t~~~~~g~~LSgGqk 499 (1230)
+|+.|+|++|++.++ +.|++||+.++... ...++.. ..+.+.++.+ |+ +........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQ-----ERVRWALEKA--QLWDEVKDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHH-----HHHHHHHHHc--CCCcchhhhhcCCcccCCHHHH
Confidence 889999999999766 56999999875321 0111111 1122334443 33 2345677789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||++||||++++|+++||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999987678999999999999864 999999999999999999998
Q ss_pred Hhh
Q 000909 579 INR 581 (1230)
Q Consensus 579 ~~~ 581 (1230)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14247 233 FTN 235 (250)
T ss_pred HcC
Confidence 764
No 340
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=7.9e-41 Score=372.82 Aligned_cols=213 Identities=28% Similarity=0.456 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEccccc-CCcccHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHH
Q 000909 1072 LVSQEPV-IYAGNIRDNIVFGKLD----------ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIA 1140 (1230)
Q Consensus 1072 ~VpQdp~-Lf~gTIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1140 (1230)
|+||+|. .+..|+++|+.++... ..++++.++++..++.+.. ......||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLA-----------DRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHH
Confidence 9999995 4567999999875310 0122455666666665432 2345679999999999
Q ss_pred HHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1141 IARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1141 lARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||||++.+|+++||||||++||+++...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLTP 227 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhCH
Confidence 9999999999999999999999999999999999875 3789999999999995 5899999999999999999998653
No 341
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-41 Score=377.36 Aligned_cols=214 Identities=28% Similarity=0.484 Sum_probs=183.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC--CChHHHhhc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE--LDVHWYRKH 1069 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~~~~lR~~ 1069 (1230)
|+++||+++|+. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2359999999999999999999999999999999999999999999999999853 234567899
Q ss_pred ceEEcccc--cCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1070 TALVSQEP--VIYAGNIRDNIVFGKL--DASE----NEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1070 i~~VpQdp--~Lf~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
++|+||+| .+|..|++||+.++.. ..+. +++.++++..++.++. ......||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-----------NKPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-----------cCChhhCCHHHHHHHHH
Confidence 99999998 5788999999986531 1222 3355566666664432 22345799999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
|||++.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 4899999999999987 4899999999999999999998764
No 342
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-41 Score=374.16 Aligned_cols=218 Identities=31% Similarity=0.494 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999974 69999999999853 455
Q ss_pred HHHhhcceEEcccccCCc-ccHHHHhccCCC--C-CC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhH
Q 000909 1064 HWYRKHTALVSQEPVIYA-GNIRDNIVFGKL--D-AS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQ 1135 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~-gTIreNl~~g~~--~-~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1135 (1230)
..+|+.++|+||++.+|. .|+++|+.++.. . .+ ++.+.++++..++.+.+. ........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHH
Confidence 678899999999999987 599999975421 1 11 234455666666644332 22344567899999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEe------CcEEEE
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVA------DGRVVE 1208 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~------~G~Ive 1208 (1230)
|||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 9999999999999999999999999999999999999998877799999999999986 579999997 899999
Q ss_pred ecCHhHHhhc
Q 000909 1209 RGTYAQLTHM 1218 (1230)
Q Consensus 1209 ~Gt~~eLl~~ 1218 (1230)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999999764
No 343
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-41 Score=375.99 Aligned_cols=218 Identities=29% Similarity=0.495 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++.+ .+.
T Consensus 39 ~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 39 VIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred eEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 5899999999963 359999999999999999999999999999999999997 689999999999865 345
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC-----CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL-----DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~-----~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
..+|++++||||++.+|..|++||+.++.. ...++++.++++..++...+.. .......+||||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHHH
Confidence 678899999999999999999999986421 1123456677777766443321 2245567899999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEE-EEeCcEEEEecCHhHHh
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIA-LVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~-vl~~G~Ive~Gt~~eLl 1216 (1230)
++|||||+++|+||||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. |||++ +|++|+|++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998777899999999999876 79975 57999999999999997
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
++
T Consensus 269 ~~ 270 (285)
T PRK14254 269 EN 270 (285)
T ss_pred hC
Confidence 65
No 344
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=373.12 Aligned_cols=214 Identities=24% Similarity=0.408 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+++++
T Consensus 7 ~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 7 RLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred EEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 5999999999963 3599999999999999999999999999999999999999999999999999988888888999
Q ss_pred eEEcccccCCc-ccHHHHhccCC-CC---------CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1071 ALVSQEPVIYA-GNIRDNIVFGK-LD---------ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1071 ~~VpQdp~Lf~-gTIreNl~~g~-~~---------~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
+|+||++.+|. .|+++|+.++. +. ..++++.++++..++.++. ......||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLA-----------DQSVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-----------cCCcccCChHHHHHH
Confidence 99999998875 69999998652 11 1123456667776665543 234568999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
+||||++++|++|||||||++||+++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999998865 7999999999999999999987
Q ss_pred hc
Q 000909 1217 HM 1218 (1230)
Q Consensus 1217 ~~ 1218 (1230)
..
T Consensus 233 ~~ 234 (265)
T PRK10253 233 TA 234 (265)
T ss_pred hH
Confidence 53
No 345
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.8e-41 Score=372.18 Aligned_cols=219 Identities=33% Similarity=0.521 Sum_probs=187.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCC---------
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQ--------- 425 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~--------- 425 (1230)
|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 578999999963 35999999999999999999999999999999999999999999999999987543
Q ss_pred ----HHHHhhheEEEccCccccc-hhHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChh
Q 000909 426 ----LKWVRREMGLVSQEHALFG-TSIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGG 497 (1230)
Q Consensus 426 ----~~~~r~~i~~v~Q~~~l~~-~ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 497 (1230)
...+++.++|++|++.+|. .|++||+.++.. ....++.. ..+.+.++.+ |++....+.+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2456889999999999885 699999987521 11122111 2234556666 7777778888999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecC
Q 000909 498 QKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGT 574 (1230)
Q Consensus 498 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 574 (1230)
||||++||||++++|+++||||||++||+.++..+.+.|++.. .++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998864 38999999999999865 99999999999999999
Q ss_pred hhHHHhhcC
Q 000909 575 HNDLINRID 583 (1230)
Q Consensus 575 ~~~l~~~~~ 583 (1230)
++++.+...
T Consensus 231 ~~~~~~~~~ 239 (252)
T TIGR03005 231 PDEIFRQPK 239 (252)
T ss_pred HHHHhcCCC
Confidence 999876433
No 346
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-41 Score=365.54 Aligned_cols=213 Identities=25% Similarity=0.427 Sum_probs=179.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3599999999999999999999999999999999999999999999999988653 356678899
Q ss_pred EEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|++|++.+++. |++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++||||++.+
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~ 149 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERR-----ERIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHR 149 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 99999987421 11111111 1223445555 665556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS-L-GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
|+++||||||++||+++.+.+.+.|.+.. + ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 150 PEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999998764 3 7899999999999876 999999999999999987764
No 347
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-41 Score=387.72 Aligned_cols=210 Identities=36% Similarity=0.530 Sum_probs=178.6
Q ss_pred ccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH----hhheEEEccCccccch-
Q 000909 371 IVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV----RREMGLVSQEHALFGT- 445 (1230)
Q Consensus 371 ~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~----r~~i~~v~Q~~~l~~~- 445 (1230)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.+.+...+ +++++||+|++.+|+.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999988776543 4589999999999964
Q ss_pred hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCC
Q 000909 446 SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSA 523 (1230)
Q Consensus 446 ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~ 523 (1230)
|++||+.++... .+.++.. ..+.+.++.+ |++........+||||||||++|||||+.+|++||||||||+
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~-----~~~~e~L~~~--gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~ 194 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERR-----EKALDALRQV--GLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSA 194 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 999999986321 1112111 1233445555 776667778889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHHH
Q 000909 524 LDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHYA 587 (1230)
Q Consensus 524 lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 587 (1230)
||+.+++.+++.|.++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+...|.
T Consensus 195 LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v 261 (400)
T PRK10070 195 LDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYV 261 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHH
Confidence 99999999999998863 48999999999999865 999999999999999999999875444443
No 348
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.3e-40 Score=367.76 Aligned_cols=220 Identities=27% Similarity=0.415 Sum_probs=192.0
Q ss_pred CccccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH
Q 000909 350 EVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV 429 (1230)
Q Consensus 350 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~ 429 (1230)
...+.|+++|+++.. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 35 ~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g----------- 98 (282)
T cd03291 35 SDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG----------- 98 (282)
T ss_pred CCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-----------
Confidence 344679999999962 3499999999999999999999999999999999999999999999998
Q ss_pred hhheEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 430 RREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 430 r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
.|+|++|++.+|+.|++||+.++... ...++.+.++..++.+.+..+|.++++.+++.+.+||||||||++||||++
T Consensus 99 --~i~yv~q~~~l~~~tv~enl~~~~~~-~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~ 175 (282)
T cd03291 99 --RISFSSQFSWIMPGTIKENIIFGVSY-DEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVY 175 (282)
T ss_pred --EEEEEeCcccccccCHHHHhhccccc-CHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHh
Confidence 49999999999999999999986432 233445556666777888899999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHH-HHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhhcCcHHHH
Q 000909 510 KNPVILLLDEATSALDSESETLVQNAL-DQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAK 588 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l-~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 588 (1230)
.+|++|||||||++||+.+...+.+.+ +...+++|+|++||+++.+..||++++|++|++++.|+++++... ...|.+
T Consensus 176 ~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~ 254 (282)
T cd03291 176 KDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSS 254 (282)
T ss_pred cCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHH
Confidence 999999999999999999999888754 555568999999999999988999999999999999999998763 344443
Q ss_pred H
Q 000909 589 M 589 (1230)
Q Consensus 589 ~ 589 (1230)
.
T Consensus 255 ~ 255 (282)
T cd03291 255 K 255 (282)
T ss_pred H
Confidence 3
No 349
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.1e-41 Score=365.88 Aligned_cols=198 Identities=33% Similarity=0.520 Sum_probs=169.6
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceE
Q 000909 993 EMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTAL 1072 (1230)
Q Consensus 993 ~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1072 (1230)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 35999999999999999999999999999999999999999999999998874 47889999
Q ss_pred EcccccC---CcccHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1073 VSQEPVI---YAGNIRDNIVFGKLD----------ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1073 VpQdp~L---f~gTIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
+||+|.+ |+.|++||+.++... ..++++.++++..++.++.. ....+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHH
Confidence 9999976 668999999865321 11234666777777765543 23457999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
+|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 68899999999999875 7999999986 56654
No 350
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=372.83 Aligned_cols=221 Identities=21% Similarity=0.389 Sum_probs=183.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHH-hhc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWY-RKH 1069 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~ 1069 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999988876554 456
Q ss_pred ceEEcccccCCcc-cHHHHhccCCCCCC--------------HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChh
Q 000909 1070 TALVSQEPVIYAG-NIRDNIVFGKLDAS--------------ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGG 1134 (1230)
Q Consensus 1070 i~~VpQdp~Lf~g-TIreNl~~g~~~~s--------------d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1134 (1230)
++|+||+|.+|.+ |+++|+.++..... +.+..+. ...+.++++.+ |++........+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999986 99999987531100 0000000 01122334433 4544555667789999
Q ss_pred HHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecC
Q 000909 1135 QRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1135 QrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1211 (1230)
||||++||||++.+|++|||||||++||+.+.+.+.+.|.+..+ ++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999998743 7899999999999865 89999999999999999
Q ss_pred HhHHhhc
Q 000909 1212 YAQLTHM 1218 (1230)
Q Consensus 1212 ~~eLl~~ 1218 (1230)
++++.+.
T Consensus 238 ~~~~~~~ 244 (255)
T PRK11300 238 PEEIRNN 244 (255)
T ss_pred HHHHhhC
Confidence 9998754
No 351
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=365.81 Aligned_cols=211 Identities=30% Similarity=0.481 Sum_probs=184.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++||+++|+. . ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999963 2 249999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEcccccCCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGK-LD-----ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~-~~-----~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||+|.+|.+ |++||+.++. +. ..++++.++++..++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999985 9999998642 11 12445777888888877665543 3799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhccc
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHMRG 1220 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~g 1220 (1230)
++++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.....
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~~ 222 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGKA 222 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhChh
Confidence 9999999999999999999999999999998753 7899999999999875 79999999999999999999986543
No 352
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.4e-41 Score=381.13 Aligned_cols=213 Identities=25% Similarity=0.436 Sum_probs=180.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999998764 35678999
Q ss_pred eEEcccccCCc-ccHHHHhccC-C-CCCCHHHH----HHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYA-GNIRDNIVFG-K-LDASENEV----VEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~-gTIreNl~~g-~-~~~sd~ei----~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+|+||++.+|. .|++||+.+. . ...+.++. .++++..++.+ .+++. ...||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~-------~~~~~----~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-------KADVR----VALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-------HhcCc----hhhCCHHHHHHHHHHH
Confidence 99999999885 6999999742 1 12233332 23333343322 23333 4579999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||+++|++|||||||++||+.+...+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999874 48899999999999865 899999999999999999999764
No 353
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1e-40 Score=368.56 Aligned_cols=217 Identities=32% Similarity=0.544 Sum_probs=187.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCC--CHHHHhhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRL--QLKWVRRE 432 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~--~~~~~r~~ 432 (1230)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +..+++++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 3599999999999999999999999999999999999999999999999998764 34567889
Q ss_pred eEEEccCccccc-hhHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 433 MGLVSQEHALFG-TSIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 433 i~~v~Q~~~l~~-~ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
++|++|++.++. .|++||+.++.. ..+.++.. ..+.+.++.+ |++.........||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAE-----KQARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998886 599999987531 11222211 1234556666 777777888899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+.+|+++||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999998764 48999999999999965 999999999999999999988653
No 354
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2e-40 Score=368.79 Aligned_cols=217 Identities=34% Similarity=0.534 Sum_probs=185.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCC--------H
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQ--------L 426 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~--------~ 426 (1230)
++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 889999999963 35999999999999999999999999999999999999999999999999986542 3
Q ss_pred HHHhhheEEEccCccccc-hhHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHH
Q 000909 427 KWVRREMGLVSQEHALFG-TSIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~-~ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 502 (1230)
..+++.++||+|++.+|+ .|++||+.++.. ....++.. ..+.+.++.+ |++......+.+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEAT-----ARARELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 456789999999999886 599999986421 11111111 1233455655 776667778899999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+||||++.+|++|||||||++||+.+.+.+.+.++++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998764 48999999999999866 99999999999999999999875
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
.
T Consensus 234 ~ 234 (250)
T PRK11264 234 D 234 (250)
T ss_pred C
Confidence 4
No 355
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=372.38 Aligned_cols=217 Identities=29% Similarity=0.505 Sum_probs=186.8
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCC-HHHHhhhe
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQ-LKWVRREM 433 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~-~~~~r~~i 433 (1230)
++++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999963 245999999999999999999999999999999999999999999999999998765 35678899
Q ss_pred EEEccCcc--ccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 434 GLVSQEHA--LFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 434 ~~v~Q~~~--l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
+|++|+|. +++.|++|||.++... .+.++..+ .+.+.++.+ |++......+..||||||||++||||++
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 5677999999886321 12222221 123345555 7777777888999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHh
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
.+|+++||||||++||+.+...+.+.++++. +|+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999998764 5899999999999998899999999999999999998865
No 356
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=6.7e-41 Score=349.97 Aligned_cols=172 Identities=42% Similarity=0.720 Sum_probs=162.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|++. +.++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999742 246999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EEcccccCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000909 1072 LVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTI 1151 (1230)
Q Consensus 1072 ~VpQdp~Lf~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~I 1151 (1230)
|++|+|.+|++|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 999999999999999999999
Q ss_pred EEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCcEE
Q 000909 1152 LLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKKLDSIALVADGRV 1206 (1230)
Q Consensus 1152 LlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~I 1206 (1230)
|||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999999875 48899999999999988999999999975
No 357
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=7.4e-41 Score=385.50 Aligned_cols=212 Identities=26% Similarity=0.410 Sum_probs=178.2
Q ss_pred CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCe----ecCCCCHHHH---h-hheEEEccCcc
Q 000909 370 SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGV----DIRRLQLKWV---R-REMGLVSQEHA 441 (1230)
Q Consensus 370 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~----~i~~~~~~~~---r-~~i~~v~Q~~~ 441 (1230)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 5666655443 3 58999999999
Q ss_pred ccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000909 442 LFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLD 518 (1230)
Q Consensus 442 l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlD 518 (1230)
+|+ .|++||+.++... .+.++. ...+.+.++.+ |++........+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~-----~~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAER-----RKRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 997 6999999987421 112211 12233445555 6766667778899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcCcHHHH
Q 000909 519 EATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRIDGHYAK 588 (1230)
Q Consensus 519 E~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 588 (1230)
||||+||+.+.+.+++.+.++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...|.+
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 262 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVA 262 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHH
Confidence 9999999999999999998864 38999999999999854 9999999999999999999998754444543
No 358
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=367.40 Aligned_cols=218 Identities=26% Similarity=0.409 Sum_probs=182.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH-Hhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW-VRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~-~r~~ 432 (1230)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 45999999999999999999999999999999999999999999999999998877643 6778
Q ss_pred eEEEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
++|++|++.+|+. |++||+.++......++..+. +.+.++.++ +++........+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999975 999999986432222222211 122233332 122334456788999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|+|+||||||++||+.+.+.+.+.++++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999998764 58999999999998755 99999999999999999999864
No 359
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=371.23 Aligned_cols=225 Identities=29% Similarity=0.434 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCCC--CH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRRL--QL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~~--~~ 426 (1230)
.|+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3599999999999999999999999999999999999985 799999999998653 23
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqri 502 (1230)
..+++.++|++|++.+|+.|++||+.++.. ..+.++..+ .+.+.++.+ .+...........+||||||||+
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDG-----VVENALRSAALWDETSDRLKSPALSLSGGQQQRL 163 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHH
Confidence 456788999999999999999999987531 112222111 122233333 11113445677789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 243 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHN 243 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999987668999999999999865 999999999999999999998764
Q ss_pred cCcHH
Q 000909 582 IDGHY 586 (1230)
Q Consensus 582 ~~~~~ 586 (1230)
+...|
T Consensus 244 ~~~~~ 248 (258)
T PRK14268 244 PREKS 248 (258)
T ss_pred CCCHH
Confidence 33333
No 360
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=9.4e-41 Score=366.11 Aligned_cols=208 Identities=27% Similarity=0.394 Sum_probs=177.9
Q ss_pred cEEEEEEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH---H
Q 000909 991 KIEMRRVDFAYPSRPD-ALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW---Y 1066 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---l 1066 (1230)
.|+++||+++|++... .++|+|+||+|++||.+||+||||||||||+++|+|+++|++|+|.+||.++.+.+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999964211 35999999999999999999999999999999999999999999999999998887653 3
Q ss_pred -hhcceEEcccccCCcc-cHHHHhccCC--CCC----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1067 -RKHTALVSQEPVIYAG-NIRDNIVFGK--LDA----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1067 -R~~i~~VpQdp~Lf~g-TIreNl~~g~--~~~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
+++++|+||+|.+|.+ |++||+.++. ... ..+++.++++..++.++.... ...||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHL-----------PAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHH
Confidence 3689999999999885 9999997531 111 133556667777776554432 34799999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCcEEEEe
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKKLDSIALVADGRVVER 1209 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~ 1209 (1230)
++|||||+++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+..||++++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999999874 27899999999999988999999999999874
No 361
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=373.41 Aligned_cols=221 Identities=30% Similarity=0.451 Sum_probs=190.0
Q ss_pred ccCcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecC---
Q 000909 988 ISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVR--- 1059 (1230)
Q Consensus 988 ~~g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~--- 1059 (1230)
..+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 13 ~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 13 TQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 3567999999999963 3599999999999999999999999999999999999875 7999999998874
Q ss_pred -CCChHHHhhcceEEcccccCCcccHHHHhccCCC--C-----CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCC
Q 000909 1060 -ELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKL--D-----ASENEVVEAARAANAHEFISSLKDGYETECGERGVQL 1131 (1230)
Q Consensus 1060 -~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~-----~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~L 1131 (1230)
......+|++++|+||+|.+|.+|++||+.++.. . ..++++.++++.+++.+.+. +..+.....|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCcccC
Confidence 3345678899999999999999999999986421 1 12355667777776654332 2334556789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1132 SGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1132 SgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
|||||||++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999988778999999999999964 8999999999999999
Q ss_pred CHhHHhhc
Q 000909 1211 TYAQLTHM 1218 (1230)
Q Consensus 1211 t~~eLl~~ 1218 (1230)
+++++...
T Consensus 243 ~~~~~~~~ 250 (265)
T PRK14252 243 ATDTIFIK 250 (265)
T ss_pred CHHHHHhC
Confidence 99999754
No 362
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-41 Score=361.74 Aligned_cols=207 Identities=26% Similarity=0.478 Sum_probs=175.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++|+|++ +++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..+++.++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999963 35999999999999 99999999999999999999999999999999999988766 67788999
Q ss_pred EEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|++|++.+|.. |++||+.+... ....++..+ .+.+.++.+ |++........+||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 148 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKA-----RVDEVLELV--NLGDRAKKKIGSLSGGMRRRVGIAQALVGD 148 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHH-----HHHHHHHHC--CCHHHHhCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999876 99999986421 111111111 122334444 554445566788999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
|+++||||||++||+.+.+.+.+.+++..+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 149 PSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999987667999999999999865 9999999999998765
No 363
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-40 Score=358.44 Aligned_cols=200 Identities=36% Similarity=0.518 Sum_probs=179.1
Q ss_pred EEEEEEEEECCCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 355 IEFEHVKFSYPSRPD--SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
|+++||+++|++..+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 578999999974311 3699999999999999999999999999999999999999999999998 6
Q ss_pred eEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 433 MGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 433 i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
|+|++|+|.+|+.|++||+.++.. ...++..++++..++.+++..+|.|+++.+++.+.+||||||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 3345566777777888899999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHH-HHHHh-cCCCeEEEEecCchhhhccCEEEEEeCCe
Q 000909 513 VILLLDEATSALDSESETLVQN-ALDQA-SLGRTTLVVAHKLSTVRNADLIAVVDNGC 568 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~-~l~~~-~~~~t~i~itH~l~~~~~~d~i~~l~~G~ 568 (1230)
+++||||||++||+++.+.+.+ .+++. .+++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 45554 34799999999999998899999999985
No 364
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6.7e-41 Score=365.63 Aligned_cols=210 Identities=25% Similarity=0.442 Sum_probs=181.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 4999999999963 3599999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEcccccCCcccHHHHhccCC---CC-CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1071 ALVSQEPVIYAGNIRDNIVFGK---LD-ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1071 ~~VpQdp~Lf~gTIreNl~~g~---~~-~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
+|+||+|.+|+.|++||+.++. .. ..++++.++++..++.+ +.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999997631 11 12233444444444421 2234556789999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEe-CcEEEEecCHh
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKKLDSIALVA-DGRVVERGTYA 1213 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~-~G~Ive~Gt~~ 1213 (1230)
++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999999874 3789999999999999899999995 67777889885
No 365
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=9.9e-41 Score=364.17 Aligned_cols=204 Identities=26% Similarity=0.415 Sum_probs=174.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH---Hhh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW---YRK 1068 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR~ 1068 (1230)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 246999999999999999999999999999999999999999999999999998876543 688
Q ss_pred cceEEcccccC-CcccHHHHhccCC--CCCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1069 HTALVSQEPVI-YAGNIRDNIVFGK--LDASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1069 ~i~~VpQdp~L-f~gTIreNl~~g~--~~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
+++|+||+|.+ +..|++||+.++. ...+++ ++.++++..++.+... ....+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAK-----------NFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCchhCCHHHHHHHHH
Confidence 99999999987 4679999998752 122332 3445566666554433 3346899999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEE
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVE 1208 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive 1208 (1230)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999874 47899999999999976 79999999999864
No 366
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.4e-41 Score=360.93 Aligned_cols=201 Identities=28% Similarity=0.507 Sum_probs=169.9
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEE
Q 000909 356 EFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGL 435 (1230)
Q Consensus 356 ~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~ 435 (1230)
+++|++++|++. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ..++++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 459999999999999999999999999999999999999999999999998854 456778999
Q ss_pred EccCc--cccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCC
Q 000909 436 VSQEH--ALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPV 513 (1230)
Q Consensus 436 v~Q~~--~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ 513 (1230)
++|++ .+++.|++||+.++.+....++ ..+.+.++.+ |++........+||||||||++||||++.+|+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 146 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGN-------EQAETVLKDL--DLYALKERHPLSLSGGQKQRLAIAAALLSGKD 146 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccH-------HHHHHHHHHc--CCchhcCCCchhCCHHHHHHHHHHHHHHhCCC
Confidence 99997 4677899999998643221110 1122344444 55555666778999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHh-cCCCeEEEEecCchhhhc-cCEEEEEeCCeEE
Q 000909 514 ILLLDEATSALDSESETLVQNALDQA-SLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLV 570 (1230)
Q Consensus 514 illlDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~ 570 (1230)
++||||||++||+.+.+.+.+.+++. .+|+|+|++||+++.+.. ||+|++|++|+++
T Consensus 147 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 147 LLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999886 468999999999999875 9999999999975
No 367
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-41 Score=369.29 Aligned_cols=218 Identities=25% Similarity=0.420 Sum_probs=183.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH-Hhhc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW-YRKH 1069 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~ 1069 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .|++
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3889999999963 46999999999999999999999999999999999999999999999999998877644 5788
Q ss_pred ceEEcccccCCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHH
Q 000909 1070 TALVSQEPVIYAG-NIRDNIVFGKL---DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAI 1145 (1230)
Q Consensus 1070 i~~VpQdp~Lf~g-TIreNl~~g~~---~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAl 1145 (1230)
++|+||++.+|.+ |++||+.++.. ..+.++.. ..+.+.++.+ |++.........||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998875 99999986421 11222111 1223344443 344444556678999999999999999
Q ss_pred ccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1146 IRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1146 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
+++|++|||||||++||+.+...+.+.+++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999998865 4899999999998775 5799999999999999999998754
No 368
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=371.14 Aligned_cols=219 Identities=33% Similarity=0.463 Sum_probs=184.3
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--CC
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR--LQ 425 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~--~~ 425 (1230)
..|+++||+++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 359999999999999999999999999999999999987 689999999999863 45
Q ss_pred HHHHhhheEEEccCccccchhHHHHHhcCCCCC--CH---HHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHH
Q 000909 426 LKWVRREMGLVSQEHALFGTSIKDNIMFGKLDA--TM---DEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQ 500 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~--~~---~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 500 (1230)
...+|+.++|++|++.+|..|++||+.++.... .. +++.++++..+ +..++++.......+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAA-------VWDECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhC-------CcchhhhhhCCCcccCCHHHHH
Confidence 667888999999999999889999999764211 11 11112222111 1223445567778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeC-----------Ce
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDN-----------GC 568 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~-----------G~ 568 (1230)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999987668999999999999865 999999996 67
Q ss_pred EEEecChhHHHhh
Q 000909 569 LVEIGTHNDLINR 581 (1230)
Q Consensus 569 i~~~g~~~~l~~~ 581 (1230)
+++.|+++++.+.
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999999764
No 369
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-40 Score=361.20 Aligned_cols=201 Identities=26% Similarity=0.468 Sum_probs=174.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5789999999632 2 39999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEcccccCCcc-cHHHHhccCCC-C-----CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGKL-D-----ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~~-~-----~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||+|.+|.+ |++||+.++.. . ..++++.++++..++.+...+. ..+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRL-----------PGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHHHHHH
Confidence 99999999975 99999986532 1 1244577778888876665443 34799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
++++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 38999999999999966 8999999999998865
No 370
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.7e-40 Score=367.54 Aligned_cols=221 Identities=23% Similarity=0.400 Sum_probs=188.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH-Hhhhe
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW-VRREM 433 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~-~r~~i 433 (1230)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 35999999999999999999999999999999999999999999999999998776654 35579
Q ss_pred EEEccCccccch-hHHHHHhcCCCCCC-H-HH---HHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHH
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLDAT-M-DE---VIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARA 507 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~~~-~-~~---~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARa 507 (1230)
+|++|++.+|++ |++||+.++..... . .. .........+.+.++.+ |++........+||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999986 99999987532100 0 00 00011122345566666 77777788889999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 508 IIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 508 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++.+|+++||||||++||+.+.+.+.+.++++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999987768999999999999976 99999999999999999998864
No 371
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=380.29 Aligned_cols=230 Identities=27% Similarity=0.381 Sum_probs=190.1
Q ss_pred cEEEEEEEEECCCCC-------CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH
Q 000909 354 EIEFEHVKFSYPSRP-------DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~-------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~ 426 (1230)
-|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2468999999999999999999999999999999999999999999999999988764
Q ss_pred H---HHhhheEEEccCcc--ccc-hhHHHHHhcCC---CCCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCCh
Q 000909 427 K---WVRREMGLVSQEHA--LFG-TSIKDNIMFGK---LDATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSG 496 (1230)
Q Consensus 427 ~---~~r~~i~~v~Q~~~--l~~-~ti~~Ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSg 496 (1230)
. .+|++|+||+|+|. +++ .|+.+|+..+. .....++. ...+.+.++.+ |++ ......+.+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 46788999999983 555 39999986421 11122211 12234555555 554 245677889999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 497 GQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 497 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
|||||++|||||+.+|++||+||||++||+.+...+.+.|.++. .|.|+|+|||+++.+.. ||+|++|++|+|+|.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999998864 38999999999999976 9999999999999999
Q ss_pred ChhHHHhhcCcHHHHHH
Q 000909 574 THNDLINRIDGHYAKMA 590 (1230)
Q Consensus 574 ~~~~l~~~~~~~~~~~~ 590 (1230)
+.+++++++...|.+..
T Consensus 238 ~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 238 TKEQIFNNPRHPYTQAL 254 (327)
T ss_pred CHHHHhcCCCCHHHHHH
Confidence 99999886555666543
No 372
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.2e-40 Score=372.85 Aligned_cols=227 Identities=23% Similarity=0.386 Sum_probs=188.7
Q ss_pred cEEEEEEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChH
Q 000909 991 KIEMRRVDFAYPSR------PDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVH 1064 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~ 1064 (1230)
.|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 38999999999631 124699999999999999999999999999999999999999999999999999766666
Q ss_pred HHhhcceEEccccc--CCcc-cHHHHhccC---CCCC----CHHHHHHHHHHhchH-HHHHhccccccccccCCCCCCCh
Q 000909 1065 WYRKHTALVSQEPV--IYAG-NIRDNIVFG---KLDA----SENEVVEAARAANAH-EFISSLKDGYETECGERGVQLSG 1133 (1230)
Q Consensus 1065 ~lR~~i~~VpQdp~--Lf~g-TIreNl~~g---~~~~----sd~ei~~al~~a~l~-~~i~~lp~gldt~vge~G~~LSg 1133 (1230)
..|++++|+||+|. ++.. |+.+|+.++ +... .++++.++++..++. +... ....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHAS-----------YYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHh-----------cCchhcCH
Confidence 66778999999985 4443 889998642 1111 124566777777773 3221 23357999
Q ss_pred hHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1134 GQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1134 GQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
|||||++||||++++|+||||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999875 37899999999999986 8999999999999999
Q ss_pred CHhHHhhcc--cccHHHhhh
Q 000909 1211 TYAQLTHMR--GAFFNLATL 1228 (1230)
Q Consensus 1211 t~~eLl~~~--g~y~~l~~~ 1228 (1230)
+++++.+.. ..+++++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~ 252 (267)
T PRK15112 233 STADVLASPLHELTKRLIAG 252 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHh
Confidence 999998763 445666653
No 373
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=374.14 Aligned_cols=219 Identities=31% Similarity=0.494 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCC----CHHH
Q 000909 355 IEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRL----QLKW 428 (1230)
Q Consensus 355 i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~----~~~~ 428 (1230)
|+++||+++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13599999999999999999999999999999999999999999999999998764 3466
Q ss_pred HhhheEEEccCc--cccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHHHHHH
Q 000909 429 VRREMGLVSQEH--ALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQKQRIA 503 (1230)
Q Consensus 429 ~r~~i~~v~Q~~--~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~ 503 (1230)
+|+.|+|++|++ .+|+.|++||+.++.. ..+.++..+ .+.+.++.+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEA-----LAREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 5788899999987531 122222222 123445554 665 3457778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 504 IARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 504 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
||||++.+|++|||||||++||+.+...+.+.|++.. .++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999998764 48999999999999865 99999999999999999998865
No 374
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=372.48 Aligned_cols=217 Identities=30% Similarity=0.471 Sum_probs=186.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
++++|++++|+++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998777777888999
Q ss_pred EEccCc--cccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 435 LVSQEH--ALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 435 ~v~Q~~--~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
||+|++ .+|+.|++||+.++.. ..+.++..+ .+.+.++.+ |+.......+..||||||||++|||||+.
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~~ 154 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIAM 154 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHHc
Confidence 999997 3677899999987532 122222211 123444444 56555677778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-ccCEEEEEeCCeEEEecChhHHHh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVR-NADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+|+++||||||++||+.+.+.+.+.++++. .|+|+|++||+++.+. .||+|++|++|++++.|+++++++
T Consensus 155 ~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 155 EPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 999999999999999999999999998764 3899999999999985 599999999999999999999876
No 375
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-41 Score=355.36 Aligned_cols=213 Identities=31% Similarity=0.481 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCe---ecCCCChHHHh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGM---DVRELDVHWYR 1067 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~---di~~i~~~~lR 1067 (1230)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||++++.|+..|++|+|.+||. |.++++.+ .
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--D 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--h
Confidence 3788999999963 45899999999999999999999999999999999999999999999999 77774443 4
Q ss_pred hcceEEcccccCCc-ccHHHHhccCCC----CC----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1068 KHTALVSQEPVIYA-GNIRDNIVFGKL----DA----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~-gTIreNl~~g~~----~~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
++||+|+|+..||. .||++||+||-. .+ ...++.+-++.+++..+-++ .+.+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~r-----------yP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADR-----------YPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhc-----------CchhcChHHHHH
Confidence 78999999999885 699999999952 12 23445556667766555433 346899999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHH
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
+||||||...|++|+||||.++||.+-.+.+++-|++.. -|.|+++|||+.+.+. -||||+||++|+|...|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 999999999999999999999999999999999998865 3899999999998875 5799999999999999999999
Q ss_pred hhcc
Q 000909 1216 THMR 1219 (1230)
Q Consensus 1216 l~~~ 1219 (1230)
...+
T Consensus 226 ~~~P 229 (345)
T COG1118 226 YDHP 229 (345)
T ss_pred hcCC
Confidence 8764
No 376
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.8e-41 Score=383.24 Aligned_cols=226 Identities=21% Similarity=0.369 Sum_probs=184.8
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC---CCeEEECCeecCCCChHHH
Q 000909 991 KIEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE---QGSVRVDGMDVRELDVHWY 1066 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~i~~~~l 1066 (1230)
-++++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|+|+++|+ +|+|.+||.|+.+++.+.+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 489999999996421 246999999999999999999999999999999999999996 9999999999999987766
Q ss_pred h----hcceEEcccc--cCCc-ccHHHHhccC---CCCCCHHH----HHHHHHHhchHHHHHhccccccccccCCCCCCC
Q 000909 1067 R----KHTALVSQEP--VIYA-GNIRDNIVFG---KLDASENE----VVEAARAANAHEFISSLKDGYETECGERGVQLS 1132 (1230)
Q Consensus 1067 R----~~i~~VpQdp--~Lf~-gTIreNl~~g---~~~~sd~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1132 (1230)
| ++|+|||||| .++. .|+.+|+... ....+.++ +.+.++.+++ |++.+ .++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~~~-~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEARK-RMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CChHH-HhcCCcccCC
Confidence 4 4799999999 4554 4777776421 01123222 3334444433 33222 2456678899
Q ss_pred hhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEe
Q 000909 1133 GGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVER 1209 (1230)
Q Consensus 1133 gGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~ 1209 (1230)
||||||++|||||+.+|++||+|||||+||..+...|.+.|+++.+ +.|+|+|||+++.+. .||+|+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 789999999999997 5899999999999999
Q ss_pred cCHhHHhhc-ccccHH
Q 000909 1210 GTYAQLTHM-RGAFFN 1224 (1230)
Q Consensus 1210 Gt~~eLl~~-~g~y~~ 1224 (1230)
|+++++.++ ...|.+
T Consensus 244 g~~~~i~~~p~~pyt~ 259 (330)
T PRK09473 244 GNARDVFYQPSHPYSI 259 (330)
T ss_pred CCHHHHHhCCCCHHHH
Confidence 999999876 334544
No 377
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=376.66 Aligned_cols=222 Identities=27% Similarity=0.456 Sum_probs=184.4
Q ss_pred cccEEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC----C-
Q 000909 352 RGEIEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR----L- 424 (1230)
Q Consensus 352 ~~~i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~----~- 424 (1230)
.+.|+++|++++|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997432 1359999999999999999999999999999999999999999999999999852 2
Q ss_pred CHHHHhhheEEEccCc--cccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHH
Q 000909 425 QLKWVRREMGLVSQEH--ALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQK 499 (1230)
Q Consensus 425 ~~~~~r~~i~~v~Q~~--~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqk 499 (1230)
+...+|+.|+|++|++ .+|+.|++||+.++.. ....++..+. +.+.++.+ |+. ...+..+.+||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLV--QLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCChhhCCHHHH
Confidence 3456788999999998 4677899999987632 1222222221 12333333 452 345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChh
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHN 576 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 576 (1230)
||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998764 38999999999998865 9999999999999999998
Q ss_pred HHHh
Q 000909 577 DLIN 580 (1230)
Q Consensus 577 ~l~~ 580 (1230)
++.+
T Consensus 237 ~~~~ 240 (289)
T PRK13645 237 EIFS 240 (289)
T ss_pred HHhc
Confidence 8865
No 378
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=375.89 Aligned_cols=218 Identities=29% Similarity=0.458 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCCC--Ch
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVREL--DV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i--~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 5899999999963 359999999999999999999999999999999999865 4999999999998653 33
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DA-S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++||||+|.+|..|++||+.++.. .. + ++++.++++..++.+.+. + ........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~----~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---D----RLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---h----HhhCChhhCCHHHH
Confidence 467889999999999999999999987521 11 1 223455666665543221 1 22345678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++|||||+.+|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999865 799999999999999999999
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
.++
T Consensus 269 ~~~ 271 (286)
T PRK14275 269 FTN 271 (286)
T ss_pred HhC
Confidence 876
No 379
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=370.52 Aligned_cols=219 Identities=31% Similarity=0.452 Sum_probs=190.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCCC--Ch
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVREL--DV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1063 (1230)
.+.+++++++|.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 3889999999953 4699999999999999999999999999999999999987 799999999998653 44
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCC-----CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKL-----DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~-----~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
..+|++++|+||+|.+|..|++||+.++.. ....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999987531 1123467778888887655432 2245667899999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe--------CcEEEEe
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVA--------DGRVVER 1209 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~--------~G~Ive~ 1209 (1230)
++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778999999999998865 79999996 8999999
Q ss_pred cCHhHHhhcc
Q 000909 1210 GTYAQLTHMR 1219 (1230)
Q Consensus 1210 Gt~~eLl~~~ 1219 (1230)
|+++++++..
T Consensus 238 g~~~~~~~~~ 247 (261)
T PRK14263 238 GPTAQIFQNP 247 (261)
T ss_pred CCHHHHHhCC
Confidence 9999998653
No 380
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.6e-40 Score=377.62 Aligned_cols=212 Identities=25% Similarity=0.424 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
++++|++++|+ +..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+ +...+|++++
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 78999999996 3459999999999999999999999999999999999999999999999999977 4467889999
Q ss_pred EEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||+|.+|.+ |++||+.+... +.+ .+++.++++..++. .........||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLR-----------PEQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-----------hHhcCchhhCCHHHHHHHHHHHH
Confidence 99999999976 99999975321 122 22344444444443 33344566899999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
|+++|++|||||||++||+.+.+.+++.+++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998778999999999998876 899999999999999999999765
No 381
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.2e-40 Score=363.75 Aligned_cols=209 Identities=30% Similarity=0.512 Sum_probs=177.0
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH---Hh
Q 000909 355 IEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW---VR 430 (1230)
Q Consensus 355 i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~---~r 430 (1230)
|+++||+++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996421 246999999999999999999999999999999999999999999999999998776543 33
Q ss_pred -hheEEEccCccccc-hhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 431 -REMGLVSQEHALFG-TSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 431 -~~i~~v~Q~~~l~~-~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
+.++|++|++.+|+ .|++||+.++.. .....+.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAK-----ERAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 67999999999986 599999987421 11111111 1223455655 7777777888899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCCeEE
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNGCLV 570 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~ 570 (1230)
|++.+|++|||||||++||+.++..+.+.|.++. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999998764 379999999999999889999999999985
No 382
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=372.67 Aligned_cols=219 Identities=30% Similarity=0.548 Sum_probs=188.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34699999999999999999999999999999999999999999999999999877777888999
Q ss_pred EEEccCcc--ccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 434 GLVSQEHA--LFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 434 ~~v~Q~~~--l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
+|++|++. ++..|++||+.++... .+.++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMK-----DIIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 4567999999875321 1222221 1233445555 6766677888999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHh
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS-L-GRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
.+|++|||||||++||+.+.+.+.+.+++.. + ++|+|++||+++.+..||+|++|++|++++.|+.+++.+
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999998864 3 589999999999988899999999999999999988765
No 383
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=374.85 Aligned_cols=220 Identities=29% Similarity=0.490 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCC----CHH
Q 000909 354 EIEFEHVKFSYPSRP--DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRL----QLK 427 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~----~~~ 427 (1230)
.|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 14699999999999999999999999999999999999999999999999998653 245
Q ss_pred HHhhheEEEccCc--cccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHHHHH
Q 000909 428 WVRREMGLVSQEH--ALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 428 ~~r~~i~~v~Q~~--~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri 502 (1230)
..++.|+|++|+| .+|+.|++|||.++.. ....++..+ .+.+.++.+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6778999999998 5777899999987532 122222211 233455555 776 356778889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|.|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998864 58999999999999865 99999999999999999998865
No 384
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=367.39 Aligned_cols=217 Identities=28% Similarity=0.466 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH-Hhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW-VRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~-~r~~ 432 (1230)
-|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3789999999963 45999999999999999999999999999999999999999999999999998777544 5778
Q ss_pred eEEEccCccccch-hHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
++|++|++.+|.. |++||+.++.. ..+.++ ....+.+.++.+ |++........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQ-----REDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHH-----HHHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998875 99999987531 111111 122344566666 777777888899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+.+|++|||||||++||+.+.+.+.+.+.+.. +|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998764 58999999999988765 99999999999999999998865
No 385
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=370.41 Aligned_cols=219 Identities=29% Similarity=0.497 Sum_probs=186.5
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCC--------
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRL-------- 424 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~-------- 424 (1230)
+.|+++|++++|++ +.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 56999999999963 4599999999999999999999999999999999999999999999999988642
Q ss_pred -----CHHHHhhheEEEccCccccch-hHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchh-cCCCCCC
Q 000909 425 -----QLKWVRREMGLVSQEHALFGT-SIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKV-GERGALL 494 (1230)
Q Consensus 425 -----~~~~~r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~L 494 (1230)
....+++.++|++|++.+|+. |++||+.++.. .....+. ...+.+.++.+ |+.... .....+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEA-----RERAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHH-----HHHHHHHHHHc--CCChhhhhCCcccC
Confidence 134667899999999999975 99999986421 1111111 12233455665 676654 6778899
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEe
Q 000909 495 SGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEI 572 (1230)
Q Consensus 495 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~ 572 (1230)
|||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999998864 48999999999999986 999999999999999
Q ss_pred cChhHHHhh
Q 000909 573 GTHNDLINR 581 (1230)
Q Consensus 573 g~~~~l~~~ 581 (1230)
|+++++...
T Consensus 234 ~~~~~~~~~ 242 (257)
T PRK10619 234 GAPEQLFGN 242 (257)
T ss_pred CCHHHhhhC
Confidence 999998754
No 386
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=380.47 Aligned_cols=229 Identities=25% Similarity=0.349 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCCC-CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC----CCCceEEECCeecCCCCHHHH
Q 000909 355 IEFEHVKFSYPSRPD-SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD----ADDGIVRIDGVDIRRLQLKWV 429 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~i~~~~~~~~ 429 (1230)
++++|++++|+.... ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.++|+++.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 789999999974321 359999999999999999999999999999999999998 489999999999998887655
Q ss_pred h----hheEEEccCcc--ccc-hhHHHHHhcCC---CCCCHHHHHHHHHHHhHHHHHHhCCCccc---chhcCCCCCCCh
Q 000909 430 R----REMGLVSQEHA--LFG-TSIKDNIMFGK---LDATMDEVIAAATAANAHNFIRQLPEGYE---TKVGERGALLSG 496 (1230)
Q Consensus 430 r----~~i~~v~Q~~~--l~~-~ti~~Ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~~g~~LSg 496 (1230)
+ +.|+||+|+|. +.+ .|+.+|+.... .....++. ...+.+.++.+ |++ ...+..+.+|||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~-----~~~~~~~L~~~--gL~~~~~~l~~~p~~LSg 156 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTR-----RQRAIDLLNQV--GIPDPASRLDVYPHQLSG 156 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHC--CCCChHHHHhCCchhCCH
Confidence 4 36999999985 443 26666554211 01111111 12233445555 553 346788899999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 497 GQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 497 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
|||||++|||||+.+|++||+||||++||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|+|+|.|
T Consensus 157 Gq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g 236 (326)
T PRK11022 157 GMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETG 236 (326)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999998864 48999999999999865 9999999999999999
Q ss_pred ChhHHHhhcCcHHHHHH
Q 000909 574 THNDLINRIDGHYAKMA 590 (1230)
Q Consensus 574 ~~~~l~~~~~~~~~~~~ 590 (1230)
+++++.+++...|.+..
T Consensus 237 ~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 237 KAHDIFRAPRHPYTQAL 253 (326)
T ss_pred CHHHHhhCCCChHHHHH
Confidence 99999886666676543
No 387
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=369.83 Aligned_cols=219 Identities=31% Similarity=0.501 Sum_probs=183.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----CCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE-----QGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~~ 1063 (1230)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.+ .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3789999999963 46999999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHHhhcceEEcccccCCcc-cHHHHhccCCC--CC-CHHHHHH----HHHHhchHHHHHhccccccccccCCCCCCChhH
Q 000909 1064 HWYRKHTALVSQEPVIYAG-NIRDNIVFGKL--DA-SENEVVE----AARAANAHEFISSLKDGYETECGERGVQLSGGQ 1135 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~g-TIreNl~~g~~--~~-sd~ei~~----al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1135 (1230)
..+|++++|+||+|.+|.. |++||+.++.. .. .+++..+ .++..++++.+ +..++ ....+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~----~~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLK----TPATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhc----CCcccCCHHH
Confidence 5778999999999999985 99999975421 11 2333322 23334443322 22233 3456899999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhH
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQ 1214 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1214 (1230)
|||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999985 79999999999999999999
Q ss_pred Hhhcc
Q 000909 1215 LTHMR 1219 (1230)
Q Consensus 1215 Ll~~~ 1219 (1230)
+++.+
T Consensus 234 ~~~~~ 238 (252)
T PRK14272 234 LFTNP 238 (252)
T ss_pred HHhCc
Confidence 98763
No 388
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=367.85 Aligned_cols=221 Identities=31% Similarity=0.471 Sum_probs=183.7
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCC--CC
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRR--LQ 425 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~--~~ 425 (1230)
+.|+++||+++|++ +++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999973 3599999999999999999999999999999999999863 69999999999874 34
Q ss_pred HHHHhhheEEEccCccccchhHHHHHhcCCCC--C-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHH
Q 000909 426 LKWVRREMGLVSQEHALFGTSIKDNIMFGKLD--A-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQ 500 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkq 500 (1230)
...+|+.++|++|++.+|+.|++||+.++... . ..++..+ .+.+.++.+ .+++....+..+.+|||||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 153 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDE-----IVEKSLKGAALWDEVKDRLKKSALGLSGGQQQ 153 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHH-----HHHHHHHHcCCchhhHHHHhcCCCCCCHHHHH
Confidence 55678899999999999989999999875311 1 1111111 111222222 112334556778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHH
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLI 579 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 579 (1230)
|++||||++.+|+++||||||++||+.++..+.+.+++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 154 RLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987678999999999998865 9999999999999999999987
Q ss_pred hh
Q 000909 580 NR 581 (1230)
Q Consensus 580 ~~ 581 (1230)
..
T Consensus 234 ~~ 235 (250)
T PRK14240 234 TN 235 (250)
T ss_pred hC
Confidence 64
No 389
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=369.37 Aligned_cols=220 Identities=28% Similarity=0.411 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD--A---DDGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~i~~--~~~ 426 (1230)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999963 359999999999999999999999999999999999997 3 59999999999864 345
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCC---CCHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLD---ATMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..+|+.++|++|++.+|+.|++||+.++... ...++..+ .+.+.++.+ .+.+.+.....+.+||||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qr 163 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQE-----IVEKSLKDVALWDEVKDRLHTQALSLSGGQQQR 163 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCchhhhhhhhCCcccCCHHHHHH
Confidence 5678899999999999989999999875321 11122111 112233333 1112344567888999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++++|+++||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 164 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 243 (259)
T PRK14274 164 LCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFS 243 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999999999999999999999988778999999999999865 99999999999999999999876
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
+
T Consensus 244 ~ 244 (259)
T PRK14274 244 N 244 (259)
T ss_pred C
Confidence 4
No 390
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.2e-40 Score=363.67 Aligned_cols=212 Identities=32% Similarity=0.493 Sum_probs=173.3
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh---HHHh
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV---HWYR 1067 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR 1067 (1230)
|+++||+++|+++. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 1269999999999999999999999999999999999999999999999999988774 5778
Q ss_pred hcceEEcccc--cCC-cccHHHHhccCC----CCCCHHHHHHHHHHhchHHHHHhcccccc-ccccCCCCCCChhHHHHH
Q 000909 1068 KHTALVSQEP--VIY-AGNIRDNIVFGK----LDASENEVVEAARAANAHEFISSLKDGYE-TECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1068 ~~i~~VpQdp--~Lf-~gTIreNl~~g~----~~~sd~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQrQrl 1139 (1230)
++++|+||+| .++ ..|+++|+.++. +...+++...+. .+.++.+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 8999999999 344 479999997531 111111111110 1222222 232 233455678999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEec
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERG 1210 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~G 1210 (1230)
+||||++.+|++|||||||++||+++...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998754 799999999999987 58999999999998865
No 391
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=371.19 Aligned_cols=219 Identities=27% Similarity=0.486 Sum_probs=188.2
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----CCeEEECCeecCC--CC
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE-----QGSVRVDGMDVRE--LD 1062 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~ 1062 (1230)
+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.|++. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 35999999999999999999999999999999999999985 8999999999853 34
Q ss_pred hHHHhhcceEEcccccCCcccHHHHhccCC------CCCC-HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhH
Q 000909 1063 VHWYRKHTALVSQEPVIYAGNIRDNIVFGK------LDAS-ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQ 1135 (1230)
Q Consensus 1063 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~------~~~s-d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1135 (1230)
...+|+.++|+||++.+|..|++||+.++. +... ++.+.++++..++.+++.. ..+..+..|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 567889999999999999999999997642 1111 2345667777777555442 2345567899999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeC-----cEEE
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVAD-----GRVV 1207 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~-----G~Iv 1207 (1230)
|||++||||++++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999853 48999999999999865 699999999 9999
Q ss_pred EecCHhHHhhc
Q 000909 1208 ERGTYAQLTHM 1218 (1230)
Q Consensus 1208 e~Gt~~eLl~~ 1218 (1230)
+.|+++++.+.
T Consensus 236 ~~~~~~~~~~~ 246 (261)
T PRK14258 236 EFGLTKKIFNS 246 (261)
T ss_pred EeCCHHHHHhC
Confidence 99999999865
No 392
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-40 Score=366.10 Aligned_cols=214 Identities=27% Similarity=0.455 Sum_probs=180.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH-Hhhhe
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW-VRREM 433 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~-~r~~i 433 (1230)
|+++||+++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999973 35999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
+|++|++.+|+. |++||+.++.......+ .+ ...+.++.+ ++++........+||||||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~-~~-----~~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRS-RK-----IPDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcch-HH-----HHHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999976 99999987632211110 00 011222222 12444566777899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 513 VILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
+++||||||++||+.+...+.+.|.+..+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999988643 7999999999999986 999999999999999999887
No 393
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-41 Score=363.84 Aligned_cols=209 Identities=32% Similarity=0.436 Sum_probs=176.3
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 355 IEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 355 i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997411 1469999999999999999999999999999999999999999999999998863 35789
Q ss_pred EEEccCccccc-hhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFG-TSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~-~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
+||+|++.+|+ .|++||+.++.. ....++. ...+.+.++.+ |++........+||||||||++||||++.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEA-----RERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999987 599999987531 1111111 12234455665 67666777788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEe--CCeEEEecCh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVD--NGCLVEIGTH 575 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~--~G~i~~~g~~ 575 (1230)
+|+++||||||++||+.+...+.+.|++.. .++|+|++||+++.+.. ||+|++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999998763 48999999999998765 99999999 7999998764
No 394
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-40 Score=365.13 Aligned_cols=210 Identities=29% Similarity=0.502 Sum_probs=183.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|++ ++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .|++++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999962 28999999999999999999999999999999999999999999999999987654 378999
Q ss_pred EEcccccCCc-ccHHHHhccCCC--CC----CHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYA-GNIRDNIVFGKL--DA----SENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~-gTIreNl~~g~~--~~----sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
++||++.+|. .|++||+.++.. .. .++++.++++..++.+++.+. ..+||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRK-----------PETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcC-----------cccCCHHHHHHHHHHHH
Confidence 9999999985 699999986422 11 233456677777776655433 35799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
++++|++|+|||||++||+.+.+.+.+.+++... ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999998653 8999999999999875 899999999999999999999875
No 395
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-40 Score=372.60 Aligned_cols=220 Identities=30% Similarity=0.512 Sum_probs=188.9
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC---ceEEECCeecCCCCHHHH
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADD---GIVRIDGVDIRRLQLKWV 429 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~---G~i~~~g~~i~~~~~~~~ 429 (1230)
..|+++|++|+|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 358999999999642 2459999999999999999999999999999999999999998 899999999987777778
Q ss_pred hhheEEEccCcc--ccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 430 RREMGLVSQEHA--LFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 430 r~~i~~v~Q~~~--l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
++++||++|+|. +++.|++|||.++... .+.++..+ .+.+.++.+ |++........+||||||||++||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIA 155 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHH
Confidence 889999999984 5678999999976322 22222211 223344555 666667778889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHh
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|||+.+|+++||||||++||+.+...+.+.|+++. .|+|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999998864 3899999999999998899999999999999999998865
No 396
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.1e-40 Score=383.95 Aligned_cols=207 Identities=27% Similarity=0.404 Sum_probs=176.7
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCe----ecCCCChHHHh----hcceEEccccc
Q 000909 1007 ALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGM----DVRELDVHWYR----KHTALVSQEPV 1078 (1230)
Q Consensus 1007 ~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~----di~~i~~~~lR----~~i~~VpQdp~ 1078 (1230)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+.+.+...+| ++++||||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 67777665543 57999999999
Q ss_pred CCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000909 1079 IYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTI 1151 (1230)
Q Consensus 1079 Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~I 1151 (1230)
+|+ .|++||+.++.. ..+ .+.+.++++..++.++.+. ...+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~-----------~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADK-----------KPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 699999987631 122 2345666777776655433 3457999999999999999999999
Q ss_pred EEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhc-ccccHH
Q 000909 1152 LLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHM-RGAFFN 1224 (1230)
Q Consensus 1152 LlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~-~g~y~~ 1224 (1230)
||||||||+||+.+.+.+++.|.+..+ ++|+|+|||+++.+. .||+|++|++|++++.|++++++.+ .+.|.+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 262 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVA 262 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHH
Confidence 999999999999999999999998753 799999999999975 5899999999999999999999876 344443
No 397
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2e-40 Score=379.99 Aligned_cols=213 Identities=26% Similarity=0.443 Sum_probs=181.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.|+.+.+ ...|+++
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4999999999963 35999999999999999999999999999999999999999999999999997654 5678999
Q ss_pred eEEcccccCC-cccHHHHhccCCC--CCCHHHH----HHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIY-AGNIRDNIVFGKL--DASENEV----VEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf-~gTIreNl~~g~~--~~sd~ei----~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
+|+||++.+| ..|++||+.+... ..+.++. .++++..+ +++..++.+ .+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~~~~~~----~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESKADARV----SDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchhhCCCh----hhCCHHHHHHHHHHH
Confidence 9999999886 4699999975211 2222222 23333333 333344444 579999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||+.+|++|||||||++||+.+...+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 48999999999999965 899999999999999999999764
No 398
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=367.80 Aligned_cols=218 Identities=30% Similarity=0.445 Sum_probs=182.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~--~~~ 426 (1230)
.|+++|++|+|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 359999999999999999999999999999999999997 479999999999864 344
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCC--CC-HHHHHHHHHHHhHHHHHHhCCCcc----cchhcCCCCCCChhHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLD--AT-MDEVIAAATAANAHNFIRQLPEGY----ETKVGERGALLSGGQK 499 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~~-~~~~~~~~~~~~~~~~i~~l~~g~----~t~~~~~g~~LSgGqk 499 (1230)
..+++.++|++|++.+|+.|++||+.++... .. .+...+ .+.+.++.+ |+ ....+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQ-----RVEESLKQA--AIWKETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHH-----HHHHHHHHc--CCCcchHHHhccChhhCCHHHH
Confidence 5678899999999999999999999875321 11 111111 112223333 33 2335677789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||++||||++++|+++||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999866 999999999999999999998
Q ss_pred Hhh
Q 000909 579 INR 581 (1230)
Q Consensus 579 ~~~ 581 (1230)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 764
No 399
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-40 Score=369.35 Aligned_cols=220 Identities=26% Similarity=0.404 Sum_probs=182.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~--~~~ 426 (1230)
-|+++|++++|++ +.+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5899999999963 459999999999999999999999999999999999865 799999999999865 334
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCC--C-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLD--A-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..++++++|++|++.+|+.|++||+.++... . ......+ .+.+.+..+ ..++....+..+.+||||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qr 172 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDE-----IVEESLTKAALWDEVKDRLHSSALSLSGGQQQR 172 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHH-----HHHHHHHHcCCCcchHHHHhcCcccCCHHHHHH
Confidence 5678899999999999989999999875211 1 1111111 111222222 1112244567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++|||||+.+|+++||||||++||+.+...+.+.++++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 173 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 252 (268)
T PRK14248 173 LCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFT 252 (268)
T ss_pred HHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999988667899999999998865 99999999999999999999876
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
+
T Consensus 253 ~ 253 (268)
T PRK14248 253 S 253 (268)
T ss_pred C
Confidence 4
No 400
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=6.6e-40 Score=412.04 Aligned_cols=221 Identities=24% Similarity=0.343 Sum_probs=152.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHh------ccc---cCCCCe-----------
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQ------RFY---DVEQGS----------- 1050 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~------rl~---~p~~G~----------- 1050 (1230)
.|+++|++. ..|+|+||+|++||.+||+|+||||||||+.-++ ++. .+..+.
T Consensus 614 ~L~v~~l~~--------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 685 (943)
T PRK00349 614 FLKLKGARE--------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDK 685 (943)
T ss_pred eEEecCCcc--------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCc
Confidence 478888851 1599999999999999999999999999998654 222 122233
Q ss_pred -EEECCeecCCC---------C-hHHHhhcce---------EEcccccCCc-----------ccHHHHhccCCC------
Q 000909 1051 -VRVDGMDVREL---------D-VHWYRKHTA---------LVSQEPVIYA-----------GNIRDNIVFGKL------ 1093 (1230)
Q Consensus 1051 -I~idG~di~~i---------~-~~~lR~~i~---------~VpQdp~Lf~-----------gTIreNl~~g~~------ 1093 (1230)
|.||..++..- + .+.+|.-.+ +-++.-.+.+ |+++.|+.|...
T Consensus 686 ~v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~ 765 (943)
T PRK00349 686 VIDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCD 765 (943)
T ss_pred eEEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCc
Confidence 34444333210 1 133444332 3333322222 455555554211
Q ss_pred -----------------CCCHHH-----HHHHHHHh----c---hHHHHHhccccccc-cccCCCCCCChhHHHHHHHHH
Q 000909 1094 -----------------DASENE-----VVEAARAA----N---AHEFISSLKDGYET-ECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1094 -----------------~~sd~e-----i~~al~~a----~---l~~~i~~lp~gldt-~vge~G~~LSgGQrQrlalAR 1143 (1230)
+.+-.| +.++++.. . ..+.+..+ |++. .++.....||||||||++|||
T Consensus 766 ~C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~v--gL~~l~l~~~~~tLSgGEkQRl~LAr 843 (943)
T PRK00349 766 VCKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDV--GLGYIKLGQPATTLSGGEAQRVKLAK 843 (943)
T ss_pred cccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHHC--CCCcccccCCcccCCHHHHHHHHHHH
Confidence 001111 12222111 0 11222222 5543 357778899999999999999
Q ss_pred HHccCC---CEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEE------eCcEEEEecCHh
Q 000909 1144 AIIRNP---TILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKKLDSIALV------ADGRVVERGTYA 1213 (1230)
Q Consensus 1144 All~~p---~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~vl------~~G~Ive~Gt~~ 1213 (1230)
||+++| +++||||||++||+++...+.+.|+++. +|.|+|+|+|+++.+..||+|++| ++|+|++.|+++
T Consensus 844 aL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~ 923 (943)
T PRK00349 844 ELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPE 923 (943)
T ss_pred HHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHH
Confidence 999999 9999999999999999999999999875 589999999999999999999999 799999999999
Q ss_pred HHhhcccc
Q 000909 1214 QLTHMRGA 1221 (1230)
Q Consensus 1214 eLl~~~g~ 1221 (1230)
++.+.++.
T Consensus 924 el~~~~~s 931 (943)
T PRK00349 924 EVAKVEAS 931 (943)
T ss_pred HHHhCccc
Confidence 99976543
No 401
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.7e-40 Score=378.23 Aligned_cols=216 Identities=28% Similarity=0.461 Sum_probs=183.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999998654 35568899
Q ss_pred EEEccCccccc-hhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFG-TSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~-~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
||++|++.++. .|++||+.+... ..+..+..+. +.+.++.+ |++........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999999885 599999975211 1222222221 12334444 55555666778899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+|+++||||||++||+.+...+.+.+++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999998863 58999999999999975 99999999999999999999865
No 402
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-40 Score=360.94 Aligned_cols=201 Identities=25% Similarity=0.444 Sum_probs=171.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 459999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEcccccCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||++.+|.+ |++||+.++.. ..+ ++++.++++..++.+. ......+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEY-----------ANKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHH-----------HhCcHhhCCHHHHHHHHHHHH
Confidence 99999999875 99999976421 111 2234444454444433 334456899999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEec
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1210 (1230)
++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999999864 47899999999999865 7999999999998865
No 403
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-40 Score=370.53 Aligned_cols=219 Identities=30% Similarity=0.474 Sum_probs=186.8
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999742 24589999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEccCcc-cc-chhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 434 GLVSQEHA-LF-GTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 434 ~~v~Q~~~-l~-~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
+|++|+|. +| ..|+++|+.++... ...++..+ .+.+.++.+ |+.......+.+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 44 56899999886321 12222211 122334444 5555566777899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHh
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
.+|+++||||||++||+.+.+.+.+.+++.. .|+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 231 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFD 231 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999998864 3789999999999988899999999999999999999865
No 404
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.8e-40 Score=379.79 Aligned_cols=231 Identities=23% Similarity=0.387 Sum_probs=188.0
Q ss_pred cEEEEEEEEECCCC-CCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC---CceEEECCeecCCCCHHHH
Q 000909 354 EIEFEHVKFSYPSR-PDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDAD---DGIVRIDGVDIRRLQLKWV 429 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~i~~~~~~~~ 429 (1230)
-++++|++++|+.. ....+++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++..++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999642 2246999999999999999999999999999999999999996 9999999999998887655
Q ss_pred h----hheEEEccCc--cccc-hhHHHHHhcCC---CCCCHHHHHHHHHHHhHHHHHHh--CCCcccchhcCCCCCCChh
Q 000909 430 R----REMGLVSQEH--ALFG-TSIKDNIMFGK---LDATMDEVIAAATAANAHNFIRQ--LPEGYETKVGERGALLSGG 497 (1230)
Q Consensus 430 r----~~i~~v~Q~~--~l~~-~ti~~Ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~--l~~g~~t~~~~~g~~LSgG 497 (1230)
+ +.|+||+|+| .+++ .|+.+|+.... ...+.++..+. +.+.++. +|++. ..++..+.+||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~-----~~~~L~~vgL~~~~-~~~~~~p~~LSgG 165 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEE-----SVRMLDAVKMPEAR-KRMKMYPHEFSGG 165 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCCChH-HHhcCCcccCCHH
Confidence 3 4799999998 4554 37888775321 11222222211 1222333 34332 3367888999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecC
Q 000909 498 QKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGT 574 (1230)
Q Consensus 498 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 574 (1230)
||||++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|+||++|+|+|.|+
T Consensus 166 ~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~ 245 (330)
T PRK09473 166 MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGN 245 (330)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999988643 8999999999999975 99999999999999999
Q ss_pred hhHHHhhcCcHHHHHH
Q 000909 575 HNDLINRIDGHYAKMA 590 (1230)
Q Consensus 575 ~~~l~~~~~~~~~~~~ 590 (1230)
++++.+++...|.+..
T Consensus 246 ~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 246 ARDVFYQPSHPYSIGL 261 (330)
T ss_pred HHHHHhCCCCHHHHHH
Confidence 9999987666676643
No 405
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.9e-41 Score=362.22 Aligned_cols=201 Identities=29% Similarity=0.498 Sum_probs=170.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCC--CChHHHhhc
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRE--LDVHWYRKH 1069 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~~~~lR~~ 1069 (1230)
|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999963 359999999999999999999999999999999999999999999999999853 455678899
Q ss_pred ceEEcccccCCc-ccHHHHhccCCC---CCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHH
Q 000909 1070 TALVSQEPVIYA-GNIRDNIVFGKL---DASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAI 1141 (1230)
Q Consensus 1070 i~~VpQdp~Lf~-gTIreNl~~g~~---~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlal 1141 (1230)
++|+||+|.+|. .|++||+.++.. +.+.+ ++.++++..++.+. +.....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADK-----------ADAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhhCccccCHHHHHHHHH
Confidence 999999999886 699999986521 22222 23444444444333 334456899999999999
Q ss_pred HHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEE
Q 000909 1142 ARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRV 1206 (1230)
Q Consensus 1142 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~I 1206 (1230)
|||++++|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|+|
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 47899999999999965 899999999975
No 406
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=371.03 Aligned_cols=222 Identities=30% Similarity=0.448 Sum_probs=184.8
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCC--C
Q 000909 352 RGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRR--L 424 (1230)
Q Consensus 352 ~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~--~ 424 (1230)
.+.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 3599999999999999999999999999999999999984 89999999999864 3
Q ss_pred CHHHHhhheEEEccCccccchhHHHHHhcCCC--CC-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHH
Q 000909 425 QLKWVRREMGLVSQEHALFGTSIKDNIMFGKL--DA-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQK 499 (1230)
Q Consensus 425 ~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqk 499 (1230)
+...+|+.++|++|++.+|+.|++||+.++.. .. ..++..+ .+.+.++.+ ++.+.+..+..+.+||||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDE-----AVERSLRGAALWDEVKDRLHENAFGLSGGQQ 174 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHH-----HHHHHHHHcCCChhHHHHhhCCcccCCHHHH
Confidence 45677889999999999998899999987521 11 1111111 111222222 22223456778899999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||++||||++++|+++||||||++||+.++..+.+.++++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999999987668999999999999865 999999999999999999998
Q ss_pred Hhh
Q 000909 579 INR 581 (1230)
Q Consensus 579 ~~~ 581 (1230)
.+.
T Consensus 255 ~~~ 257 (272)
T PRK14236 255 FTS 257 (272)
T ss_pred hcC
Confidence 753
No 407
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.3e-40 Score=359.47 Aligned_cols=203 Identities=25% Similarity=0.427 Sum_probs=173.8
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ..+++.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999963 4699999999999999999999999999999999999999999999999988754 45678899
Q ss_pred EEccCccccc-hhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALFG-TSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~~-~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|++|++.++. .|++||+.++.. ..+.+++.+ .++.+ |++......+.+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~---------~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDE---------VLDVV--GLKDSAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHH---------HHHHc--CCHHHHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998885 699999987532 112222322 33443 555556667788999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
|+++||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998764 58999999999999875 9999999999998765
No 408
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.8e-40 Score=348.71 Aligned_cols=178 Identities=33% Similarity=0.588 Sum_probs=165.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++. ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23599999999999999999999999999999999999999999999999988766 566788999
Q ss_pred EEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCE
Q 000909 435 LVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVI 514 (1230)
Q Consensus 435 ~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 514 (1230)
|++|++.+|+.|++||+ +.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 468999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhccCEEEEEeCCeEEEec
Q 000909 515 LLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 515 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 573 (1230)
+||||||++||+.+++.+.+.+++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999998876789999999999999889999999999998764
No 409
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=369.37 Aligned_cols=225 Identities=26% Similarity=0.452 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECC------eecCCCChH
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDG------MDVRELDVH 1064 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG------~di~~i~~~ 1064 (1230)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 4999999999963 3599999999999999999999999999999999999999997666654 677777778
Q ss_pred HHhhcceEEcccccCCcc-cHHHHhccCCC--CC-CHHH----HHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1065 WYRKHTALVSQEPVIYAG-NIRDNIVFGKL--DA-SENE----VVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1065 ~lR~~i~~VpQdp~Lf~g-TIreNl~~g~~--~~-sd~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
.+|++++|+||+|.+|.+ |+++|+.++.. .. .+++ +.++++..++.+++. ......+..||||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHHH
Confidence 889999999999999976 99999986522 11 2222 345555556543321 122345678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|++|||||||++||+.+++.+.+.|++..+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999998877899999999999995 5899999999999999999999
Q ss_pred hhcc-cccHHH
Q 000909 1216 THMR-GAFFNL 1225 (1230)
Q Consensus 1216 l~~~-g~y~~l 1225 (1230)
.+.+ ..|.+.
T Consensus 240 ~~~~~~~~~~~ 250 (257)
T PRK14246 240 FTSPKNELTEK 250 (257)
T ss_pred HhCCCcHHHHH
Confidence 8763 335443
No 410
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=369.56 Aligned_cols=218 Identities=28% Similarity=0.433 Sum_probs=185.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD--V---EQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999963 359999999999999999999999999999999999975 4 58999999999864 344
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCC--CCC-C----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGK--LDA-S----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQR 1136 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~--~~~-s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQr 1136 (1230)
..+|++++|+||+|.+|..|+++|+.++. .+. . ++++.++++.+++.+.+. ........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHH
Confidence 56788999999999999999999998642 111 1 234455556665543322 223455678999999
Q ss_pred HHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHH
Q 000909 1137 QRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQL 1215 (1230)
Q Consensus 1137 QrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1215 (1230)
||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999865 799999999999999999998
Q ss_pred hhc
Q 000909 1216 THM 1218 (1230)
Q Consensus 1216 l~~ 1218 (1230)
...
T Consensus 235 ~~~ 237 (252)
T PRK14255 235 FLN 237 (252)
T ss_pred hcC
Confidence 865
No 411
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=368.21 Aligned_cols=213 Identities=26% Similarity=0.424 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC--------CCeEEECCeecCCCCh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE--------QGSVRVDGMDVRELDV 1063 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~--------~G~I~idG~di~~i~~ 1063 (1230)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999953 36999999999999999999999999999999999999998 9999999999998888
Q ss_pred HHHhhcceEEccccc-CCcccHHHHhccCCC-C------CC---HHHHHHHHHHhchHHHHHhccccccccccCCCCCCC
Q 000909 1064 HWYRKHTALVSQEPV-IYAGNIRDNIVFGKL-D------AS---ENEVVEAARAANAHEFISSLKDGYETECGERGVQLS 1132 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~-Lf~gTIreNl~~g~~-~------~s---d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1132 (1230)
..+|+.++|+||++. +|..|++||+.++.. . .+ ++.++++++..++. +.++.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGAT-----------ALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcH-----------hhhcCCcccCC
Confidence 888899999999986 578899999987521 1 11 12344455555543 33445567899
Q ss_pred hhHHHHHHHHHHHc---------cCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEE
Q 000909 1133 GGQRQRIAIARAII---------RNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIAL 1200 (1230)
Q Consensus 1133 gGQrQrlalARAll---------~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~v 1200 (1230)
||||||++|||||+ .+|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998753 789999999999986 5899999
Q ss_pred EeCcEEEEecCHhHHhhc
Q 000909 1201 VADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1201 l~~G~Ive~Gt~~eLl~~ 1218 (1230)
|++|+|++.|+++++++.
T Consensus 228 l~~G~i~~~g~~~~~~~~ 245 (272)
T PRK13547 228 LADGAIVAHGAPADVLTP 245 (272)
T ss_pred EECCeEEEecCHHHHcCH
Confidence 999999999999998753
No 412
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-40 Score=337.97 Aligned_cols=220 Identities=27% Similarity=0.437 Sum_probs=191.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH-Hhhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW-VRRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~-~r~~ 432 (1230)
-++++|++-.|+. ..+|++|||++++||+++++|+||+||||++++|+|+.+|.+|+|.++|+|+...+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999974 45999999999999999999999999999999999999999999999999999998765 5678
Q ss_pred eEEEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|+||||.-.+|+. ||+||+.+|......++. .....++..+-+| -+....+.++.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~----~~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEA----QERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccc----ccccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999976 999999987432221111 1111334455566 467778899999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|++|+|||||.+|-|.-.+.|.+.|+++.+ +.||++|.++...... |||.+||++|+|+.+|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999998764 6799999999998765 999999999999999999999874
No 413
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-40 Score=365.63 Aligned_cols=220 Identities=30% Similarity=0.465 Sum_probs=184.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CceEEECCeecCCC--CH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDAD-----DGIVRIDGVDIRRL--QL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~i~~~--~~ 426 (1230)
.|+++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 35999999999999999999999999999999999999997 69999999998643 44
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCC--CC-HHHHHHHHHHHhHHHHHH--hCCCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLD--AT-MDEVIAAATAANAHNFIR--QLPEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~~-~~~~~~~~~~~~~~~~i~--~l~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..+|+.++||+|++.+|+.|++||+.++... .. .++..+.+. +.++ .+.+++....+..+.+||||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVE-----KSLRQAALWDEVKDNLHKSGLALSGGQQQR 155 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHH-----HHHHHhCCchhhhhHhhCCcccCCHHHHHH
Confidence 5778899999999999988999999876321 11 111111111 1122 122223445678889999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++.+|+++||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14249 156 LCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFS 235 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887668999999999999876 89999999999999999999865
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
.
T Consensus 236 ~ 236 (251)
T PRK14249 236 R 236 (251)
T ss_pred C
Confidence 3
No 414
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.4e-40 Score=359.08 Aligned_cols=207 Identities=33% Similarity=0.544 Sum_probs=176.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999974 3599999999999999999999999999999999999999999999999998765543 46899
Q ss_pred EEccCccccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|++|++.+|. .|++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 5999999875221 12222111 223345555 676667778889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
|+++||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999998864 38999999999999876 9999999999999875
No 415
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=367.17 Aligned_cols=223 Identities=26% Similarity=0.420 Sum_probs=184.7
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCceEEECCeecCCC--C
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD--A---DDGIVRIDGVDIRRL--Q 425 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~i~~~--~ 425 (1230)
+.|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++... +
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 56999999999963 359999999999999999999999999999999999986 4 689999999998653 3
Q ss_pred HHHHhhheEEEccCccccc-hhHHHHHhcCCCC---CCHHHHHHHHHHHhHHHHHHhCCCcc----cchhcCCCCCCChh
Q 000909 426 LKWVRREMGLVSQEHALFG-TSIKDNIMFGKLD---ATMDEVIAAATAANAHNFIRQLPEGY----ETKVGERGALLSGG 497 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~-~ti~~Ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~----~t~~~~~g~~LSgG 497 (1230)
...+|+.++|++|++.+|. .|++||+.++... .+.++..+ .+.+.++.+ |+ ....+..+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADE-----IVESSLKRV--ALWDEVKDRLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHc--CCchhhhHHhhCCcCcCCHH
Confidence 4567889999999999987 5999999864211 11111111 122333333 33 23456678899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChh
Q 000909 498 QKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHN 576 (1230)
Q Consensus 498 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 576 (1230)
||||++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988777899999999999865 9999999999999999999
Q ss_pred HHHhhcCcH
Q 000909 577 DLINRIDGH 585 (1230)
Q Consensus 577 ~l~~~~~~~ 585 (1230)
++.......
T Consensus 233 ~~~~~~~~~ 241 (252)
T PRK14256 233 KIFTTPEKK 241 (252)
T ss_pred HHHhCCCcH
Confidence 987643333
No 416
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.4e-40 Score=363.25 Aligned_cols=211 Identities=26% Similarity=0.400 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
-|+++|++++|++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5899999999963 3599999999999999999999999999999999999999999999999999888887788899
Q ss_pred EEEccCccccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
+|++|++.+|+.|++||+.++.. ....+ ...+.+.++.+ |+. +.....+.+||||||||++|||||++
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~-------~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPD-------PAIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChH-------HHHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999998899999986421 01111 01223455666 664 56788889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEe-CCeEEEecChh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVD-NGCLVEIGTHN 576 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~-~G~i~~~g~~~ 576 (1230)
+|+++||||||++||+.+...+.+.+.+.. .++|+|++||+++.++.||++++|+ ++..+++|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999998864 3889999999999998899999995 77777888886
No 417
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-40 Score=366.24 Aligned_cols=220 Identities=30% Similarity=0.435 Sum_probs=183.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcC---CCC--CCceEEECCeecCCC--CH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRF---YDA--DDGIVRIDGVDIRRL--QL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~---~~~--~~G~i~~~g~~i~~~--~~ 426 (1230)
.|+++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.+||+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 4599999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCC--C-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLD--A-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..+++.++|++|++.+|+.|++||+.++... . ..++..+ .+.+.++.+ ++.+++...+.+.+||||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQ-----RVEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHH-----HHHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 5678899999999999988999999875321 1 1111111 122333333 2222345678888999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999999988778999999999999865 99999999999999999999976
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
.
T Consensus 235 ~ 235 (250)
T PRK14245 235 N 235 (250)
T ss_pred C
Confidence 4
No 418
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-40 Score=369.48 Aligned_cols=221 Identities=25% Similarity=0.400 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~--~~~ 426 (1230)
-++++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 359999999999999999999999999999999999997 699999999999853 345
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqri 502 (1230)
..++++++|++|++.+|..|++||+.++.. ....++..+ ..+.+.++.+ .+++....+..+.+||||||||+
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv 176 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLD----EIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRL 176 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHH----HHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHH
Confidence 667889999999999998899999987531 111111111 1111222222 12444556778899999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~ 256 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFSN 256 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 9999999999999999999999999999999999988778999999999999865 999999999999999999998764
No 419
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-40 Score=368.56 Aligned_cols=218 Identities=29% Similarity=0.433 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CCCeEEECCeecCC--CCh
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV-----EQGSVRVDGMDVRE--LDV 1063 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1063 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+ .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 5999999999963 3599999999999999999999999999999999999864 58999999999864 344
Q ss_pred HHHhhcceEEcccccCCcccHHHHhccCCCC-----CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHH
Q 000909 1064 HWYRKHTALVSQEPVIYAGNIRDNIVFGKLD-----ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQR 1138 (1230)
Q Consensus 1064 ~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~-----~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1138 (1230)
..+|++++|+||++.+|+.|+++|+.++... ..++++.++++.+++.+.+.. ........||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHHH
Confidence 5678999999999999999999999875311 123445666777777554432 2334567899999999
Q ss_pred HHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEe---------CcEEEE
Q 000909 1139 IAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIK-KLDSIALVA---------DGRVVE 1208 (1230)
Q Consensus 1139 lalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~vl~---------~G~Ive 1208 (1230)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||++++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 9999999999999999999999999999999999999877899999999999986 479999997 899999
Q ss_pred ecCHhHHhhc
Q 000909 1209 RGTYAQLTHM 1218 (1230)
Q Consensus 1209 ~Gt~~eLl~~ 1218 (1230)
.|+++++...
T Consensus 250 ~g~~~~~~~~ 259 (274)
T PRK14265 250 FSPTEQMFGS 259 (274)
T ss_pred eCCHHHHHhC
Confidence 9999999865
No 420
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=367.70 Aligned_cols=220 Identities=26% Similarity=0.373 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCceEEECCeecCCC--CH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD--A---DDGIVRIDGVDIRRL--QL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~i~~~--~~ 426 (1230)
-++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 359999999999999999999999999999999999954 6 499999999998643 34
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCC--CCC-HHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKL--DAT-MDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~~-~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..+|+.++||+|++.+|+.|++||+.++.. ... .++..+ .+.+.++.+ ..++.+..+..+.+||||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDE-----AVEKSLKGASIWDEVKDRLHDSALGLSGGQQQR 156 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHH-----HHHHHHHHcCCchhHHHHHhcCcccCCHHHHHH
Confidence 567889999999999999999999987521 111 111111 112223333 1122345677888999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++.+|+++||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T PRK14239 157 VCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFM 236 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667999999999998865 99999999999999999999876
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
.
T Consensus 237 ~ 237 (252)
T PRK14239 237 N 237 (252)
T ss_pred C
Confidence 4
No 421
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.2e-40 Score=379.60 Aligned_cols=217 Identities=27% Similarity=0.447 Sum_probs=183.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
-|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999963 45999999999999999999999999999999999999999999999999997654 4678899
Q ss_pred EEEccCccccc-hhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFG-TSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~-~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
||+||++.++. .|++||+.+... ..+..+..+. +.+.++.+ |++........+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFA--RLESKADARVSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999875 599999985211 1122222221 12333333 55555566667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+|+++||||||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|+++..|+++++.+.
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999998864 58999999999999976 999999999999999999998753
No 422
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.3e-40 Score=363.54 Aligned_cols=213 Identities=32% Similarity=0.453 Sum_probs=176.5
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH---HHHh
Q 000909 355 IEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL---KWVR 430 (1230)
Q Consensus 355 i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~---~~~r 430 (1230)
|+++||+++|++.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996421 1259999999999999999999999999999999999999999999999999987763 5678
Q ss_pred hheEEEccCc--ccc-chhHHHHHhcCCCC---CCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHHHHHH
Q 000909 431 REMGLVSQEH--ALF-GTSIKDNIMFGKLD---ATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQKQRIA 503 (1230)
Q Consensus 431 ~~i~~v~Q~~--~l~-~~ti~~Ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~ 503 (1230)
++++|++|++ .++ ..|++||+.++... ...++..+. ...+.++.+ |+. ........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~----~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKE----AVLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHH----HHHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 8999999998 344 46999999864211 111111111 012345555 663 4567888999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 504 IARAIIKNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 504 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
||||++.+|+++||||||++||+.++..+.+.|++..+ |+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999988643 8999999999999874 9999999999998765
No 423
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=366.00 Aligned_cols=216 Identities=28% Similarity=0.469 Sum_probs=184.8
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecC------CCCHHH
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIR------RLQLKW 428 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~------~~~~~~ 428 (1230)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 35999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhhheEEEccCccccch-hHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHH
Q 000909 429 VRREMGLVSQEHALFGT-SIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAI 504 (1230)
Q Consensus 429 ~r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~i 504 (1230)
+|++|+|++|++.+|.+ |++||+.++.. ....++. ...+.+.++.+ |++..+.....+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQA-----LARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 78899999999999875 99999975311 1112221 12334556666 77777788889999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 505 ARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 505 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|||++.+|+++||||||++||+++...+.+.+++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 999999999999999999999999999999998864 48999999999999865 99999999999999999888653
No 424
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=368.01 Aligned_cols=222 Identities=22% Similarity=0.400 Sum_probs=188.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH-hhh
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV-RRE 432 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~-r~~ 432 (1230)
-++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999988776544 456
Q ss_pred eEEEccCccccch-hHHHHHhcCCCCCCH----------HHH--HHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHH
Q 000909 433 MGLVSQEHALFGT-SIKDNIMFGKLDATM----------DEV--IAAATAANAHNFIRQLPEGYETKVGERGALLSGGQK 499 (1230)
Q Consensus 433 i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~----------~~~--~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 499 (1230)
++|++|++.+|.. |++||+.++...... ... ........+.+.++.+ |++...+..+.+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999986 999999986321000 000 0001112334556666 787788889999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChh
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-L-GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHN 576 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 576 (1230)
||++||||++.+|++|||||||++||+.+.+.+.+.|.+.. + |+|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 99999999999999999999999999999999999998764 3 7899999999999866 9999999999999999998
Q ss_pred HHHh
Q 000909 577 DLIN 580 (1230)
Q Consensus 577 ~l~~ 580 (1230)
++.+
T Consensus 240 ~~~~ 243 (255)
T PRK11300 240 EIRN 243 (255)
T ss_pred HHhh
Confidence 8764
No 425
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=371.67 Aligned_cols=221 Identities=29% Similarity=0.483 Sum_probs=187.6
Q ss_pred cEEEEEEEEECCCCC---CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCC-HHHH
Q 000909 354 EIEFEHVKFSYPSRP---DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQ-LKWV 429 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~---~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~-~~~~ 429 (1230)
-|+++|++++|++.. .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999987653 3567
Q ss_pred hhheEEEccCcc--ccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 430 RREMGLVSQEHA--LFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 430 r~~i~~v~Q~~~--l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
++.+||++|+|. ++..|+.+|+.|+... .+..+..+ .+.+.++.+ |++........+||||||||++||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~la 156 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRE-----RVDESLKKV--GMYEYRRHAPHLLSGGQKQRVAIA 156 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHH-----HHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHH
Confidence 889999999984 6667999999986321 12222211 123344444 666667777889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCCeEEEecChhHHHhh
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|||+.+|+++||||||++||+.+...+.+.++++. .|+|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 157 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 157 GILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998864 38999999999999988999999999999999999998763
No 426
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-40 Score=367.32 Aligned_cols=218 Identities=30% Similarity=0.439 Sum_probs=183.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~--~~~ 426 (1230)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|++. |++|+|.++|.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 359999999999999999999999999999999999986 479999999999853 345
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCCC--C---HHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLDA--T---MDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..++++++|++|++.+|+.|++||+.++.... . .+++.++++..++.+. ++...+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDE-------VKDKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhh-------HHHHhcCCcccCCHHHHHH
Confidence 67788999999999999889999999764211 1 1112222233322222 2234567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEe---------CCeEEE
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVD---------NGCLVE 571 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~---------~G~i~~ 571 (1230)
++||||++++|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999987767899999999999866 99999998 899999
Q ss_pred ecChhHHHhh
Q 000909 572 IGTHNDLINR 581 (1230)
Q Consensus 572 ~g~~~~l~~~ 581 (1230)
.|+++|+.+.
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999999764
No 427
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=366.72 Aligned_cols=227 Identities=23% Similarity=0.380 Sum_probs=187.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCCC--CH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRRL--QL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~~--~~ 426 (1230)
-|+++|++|+|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 4599999999999999999999999999999999999763 489999999999765 45
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCCC---CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLDA---TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~---~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
...++.++|++|++.+|+.|++||+.++.... ...+..+ .+.+.++.+ .+++.+..++.+.+||||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 157 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDT-----IVEKSLKGAALWDEVKDRLHDSALSLSGGQQQR 157 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHH-----HHHHHHHHhcCchhhHHHhhcChhhCCHHHHHH
Confidence 56788999999999999899999999863211 1111111 111222222 2234455778889999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 158 v~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 237 (253)
T PRK14261 158 LCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFE 237 (253)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHh
Confidence 99999999999999999999999999999999999987667999999999999965 99999999999999999999876
Q ss_pred hcCcHHHH
Q 000909 581 RIDGHYAK 588 (1230)
Q Consensus 581 ~~~~~~~~ 588 (1230)
+....+.+
T Consensus 238 ~~~~~~~~ 245 (253)
T PRK14261 238 NPHEELTE 245 (253)
T ss_pred CCCcHHHH
Confidence 43333433
No 428
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=374.86 Aligned_cols=219 Identities=29% Similarity=0.488 Sum_probs=187.6
Q ss_pred CcEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCCCeEEECCeecCCC--C
Q 000909 990 GKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD-----VEQGSVRVDGMDVREL--D 1062 (1230)
Q Consensus 990 g~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i--~ 1062 (1230)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 35999999999963 359999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHHHhhcceEEcccccCCcccHHHHhccCCCC-------------------CCHHHHHHHHHHhchHHHHHhcccccccc
Q 000909 1063 VHWYRKHTALVSQEPVIYAGNIRDNIVFGKLD-------------------ASENEVVEAARAANAHEFISSLKDGYETE 1123 (1230)
Q Consensus 1063 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~g~~~-------------------~sd~ei~~al~~a~l~~~i~~lp~gldt~ 1123 (1230)
...+|++++|+||++.+|++|++||+.++... ..++++.++++.+++.+. +++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDE-------VNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchh-------hhHH
Confidence 56788999999999999999999999865210 012345555665555333 3344
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEE-EEE
Q 000909 1124 CGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKK-LDSI-ALV 1201 (1230)
Q Consensus 1124 vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I-~vl 1201 (1230)
+...+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 55667899999999999999999999999999999999999999999999998777899999999999865 8997 578
Q ss_pred eCcEEEEecCHhHHhhc
Q 000909 1202 ADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1202 ~~G~Ive~Gt~~eLl~~ 1218 (1230)
++|++++.|+++++.+.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999999764
No 429
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.7e-40 Score=359.75 Aligned_cols=205 Identities=35% Similarity=0.577 Sum_probs=174.7
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEE
Q 000909 356 EFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGL 435 (1230)
Q Consensus 356 ~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~ 435 (1230)
+++|++++|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999742 2459999999999999999999999999999999999999999999999999988777788899999
Q ss_pred EccCcc--ccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 436 VSQEHA--LFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 436 v~Q~~~--l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
++|++. +++.|++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIE-----ERVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999984 5678999999875321 1222111 1223445555 676667778889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCe
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGC 568 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~ 568 (1230)
|+++||||||++||+.+++.+.+.|.+.. +|+|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999998864 48999999999999987 99999999985
No 430
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=379.46 Aligned_cols=225 Identities=21% Similarity=0.334 Sum_probs=185.3
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc----CCCCeEEECCeecCCCChHHH
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD----VEQGSVRVDGMDVRELDVHWY 1066 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~~~~l 1066 (1230)
|+++||+++|+.+. ..++|+||||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||+|+.+++.+.+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 79999999996421 2459999999999999999999999999999999999986 589999999999998887765
Q ss_pred h----hcceEEcccccC--C-cccHHHHhccCC------C----C--CCHHHHHHHHHHhchHHHHHhccccccccccCC
Q 000909 1067 R----KHTALVSQEPVI--Y-AGNIRDNIVFGK------L----D--ASENEVVEAARAANAHEFISSLKDGYETECGER 1127 (1230)
Q Consensus 1067 R----~~i~~VpQdp~L--f-~gTIreNl~~g~------~----~--~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~ 1127 (1230)
+ ++|+||||+|.. + ..||.+|+.... . . ...+++.++++.+++.+.-. .....
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhCC
Confidence 4 479999999963 3 358999985310 0 0 01234566777777753211 11234
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCc
Q 000909 1128 GVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADG 1204 (1230)
Q Consensus 1128 G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G 1204 (1230)
...||||||||++|||||+.+|+|||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|+||++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 568999999999999999999999999999999999999999999998753 7999999999999965 8999999999
Q ss_pred EEEEecCHhHHhhc-ccccHH
Q 000909 1205 RVVERGTYAQLTHM-RGAFFN 1224 (1230)
Q Consensus 1205 ~Ive~Gt~~eLl~~-~g~y~~ 1224 (1230)
+|+|.|+++++.++ ...|.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHH
Confidence 99999999999876 344544
No 431
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-40 Score=369.94 Aligned_cols=222 Identities=25% Similarity=0.375 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.|+++|++++|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5899999999963 3599999999999999999999999999999999999999999999999999888888888899
Q ss_pred EEEccCccccch-hHHHHHhcCCCCCC-HHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLDAT-MDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
+|++|++.++.. |+.||+.++..... ............+.+.++.+ |++........+||||||||++||||++.+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 165 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV--GLKPLAHRLVDSLSGGERQRAWIAMLVAQD 165 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc--CCHHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999877655 99999997632110 00000000011223344444 555556667779999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|+++||||||++||+.+.+.+.+.|.++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 166 p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 166 SRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 99999999999999999999999998864 38999999999999865 99999999999999999988865
No 432
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=369.10 Aligned_cols=218 Identities=29% Similarity=0.477 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCCCC--HH
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRRLQ--LK 427 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~~~--~~ 427 (1230)
-+++|++|+|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999963 459999999999999999999999999999999999986 47999999999986543 33
Q ss_pred HHhhheEEEccCccccchhHHHHHhcCCC--CC--CHHHHHHHHHHHhHHHHHHhCCCccc----chhcCCCCCCChhHH
Q 000909 428 WVRREMGLVSQEHALFGTSIKDNIMFGKL--DA--TMDEVIAAATAANAHNFIRQLPEGYE----TKVGERGALLSGGQK 499 (1230)
Q Consensus 428 ~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~--~~~~~~~~~~~~~~~~~i~~l~~g~~----t~~~~~g~~LSgGqk 499 (1230)
.+|+.++|++|++.+|+.|++||+.++.. .. ..++.. ..+.+.++.+ |+. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLD-----EIVEKSLTSV--GLWEELGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHH-----HHHHHHHHHc--CCCchhhhHhhcChhhCCHHHH
Confidence 56889999999999998999999987521 11 111111 1122334444 442 345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||++||||++++|+++||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987778999999999999875 999999999999999999998
Q ss_pred Hhhc
Q 000909 579 INRI 582 (1230)
Q Consensus 579 ~~~~ 582 (1230)
.+.+
T Consensus 236 ~~~~ 239 (251)
T PRK14244 236 FKNP 239 (251)
T ss_pred hcCC
Confidence 7643
No 433
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-40 Score=366.03 Aligned_cols=216 Identities=28% Similarity=0.415 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999973 35999999999999999999999999999999999999999999999999998888777888999
Q ss_pred EEccCccc-cchhHHHHHhcCCCCC--CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc--
Q 000909 435 LVSQEHAL-FGTSIKDNIMFGKLDA--TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII-- 509 (1230)
Q Consensus 435 ~v~Q~~~l-~~~ti~~Ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~-- 509 (1230)
|++|++.+ +..|++||+.++.... ..++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~~ 152 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDD-----ALVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQL 152 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHH-----HHHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhcc
Confidence 99999987 5679999998763211 111111 1123344444 6666667778899999999999999999
Q ss_pred ----cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 510 ----KNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 510 ----~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
.+|+++||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 153 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 153 WEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred cccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999998864 58999999999999875 99999999999999999988865
No 434
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-40 Score=366.76 Aligned_cols=222 Identities=28% Similarity=0.403 Sum_probs=185.5
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--C
Q 000909 352 RGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR--L 424 (1230)
Q Consensus 352 ~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~--~ 424 (1230)
...|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 18 ~~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 346999999999963 469999999999999999999999999999999999997 589999999999864 3
Q ss_pred CHHHHhhheEEEccCccccchhHHHHHhcCCCC--C-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHH
Q 000909 425 QLKWVRREMGLVSQEHALFGTSIKDNIMFGKLD--A-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQK 499 (1230)
Q Consensus 425 ~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqk 499 (1230)
+...+++.|+|++|++.+|..|++||+.++... . ..++.. ..+.+.++.+ .+++++..+..+.+||||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~ 169 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLD-----EIVETSLKQAALWDQVKDDLHKSALTLSGGQQ 169 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHH-----HHHHHHHHHcCCCchhhhhhcCCcccCCHHHH
Confidence 455678899999999999989999999875321 1 111111 1112223332 11223556788899999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||++||||++++|+++||||||++||+.+.+.+.+.|+++.++.|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999998
Q ss_pred Hhh
Q 000909 579 INR 581 (1230)
Q Consensus 579 ~~~ 581 (1230)
...
T Consensus 250 ~~~ 252 (267)
T PRK14237 250 FTN 252 (267)
T ss_pred hcC
Confidence 753
No 435
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.7e-40 Score=374.74 Aligned_cols=215 Identities=22% Similarity=0.426 Sum_probs=187.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
++++|++++|++ +.+|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. +...+++++|
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 459999999999999999999999999999999999999999999999999876 3456788999
Q ss_pred EEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|+||++.+++. |++||+.+... ....++..+ .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 99999986321 111222211 233456666 777777888899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|+++||||||++||+.+.+.+.+.++++.+++|+|++||+++.+.. ||+|++|++|+++..|+++++.+
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 9999999999999999999999999988778999999999999876 99999999999999999999865
No 436
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-40 Score=368.00 Aligned_cols=221 Identities=25% Similarity=0.407 Sum_probs=185.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+..++++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 45999999999999999999999999999999999999999999999999998888778888999
Q ss_pred EEccCccccch-hHHHHHhcCCCCCC-HHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKLDAT-MDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
|++|++.++.+ |+.||+.++..... ............+.+.++.+ |++......+..||||||||++||||++.+|
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p 157 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQT--RINHLADRRLTDLSGGQRQRAFLAMVLAQDT 157 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHc--CCHHHHcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999988876 99999998632100 00000000011122334443 6665667778899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 513 VILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 158 ~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 158 PVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999998764 48999999999999865 99999999999999999998865
No 437
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=365.03 Aligned_cols=205 Identities=31% Similarity=0.416 Sum_probs=177.1
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
..|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.
T Consensus 11 ~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~ 82 (257)
T PRK11247 11 TPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EARED 82 (257)
T ss_pred CcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCc
Confidence 35999999999963 35999999999999999999999999999999999999999999999998763 45778
Q ss_pred eEEEccCccccc-hhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 433 MGLVSQEHALFG-TSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 433 i~~v~Q~~~l~~-~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
++|++|++.+|+ .|++||+.++......+ .+.+.++.+ |++......+.+||||||||++|||||+++
T Consensus 83 i~~v~q~~~l~~~~tv~enl~~~~~~~~~~---------~~~~~l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~ 151 (257)
T PRK11247 83 TRLMFQDARLLPWKKVIDNVGLGLKGQWRD---------AALQALAAV--GLADRANEWPAALSGGQKQRVALARALIHR 151 (257)
T ss_pred eEEEecCccCCCCCcHHHHHHhcccchHHH---------HHHHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999999987 59999999863211111 223444555 666667778889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChh
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHN 576 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 576 (1230)
|+++||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 152 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 152 PGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999998753 47999999999999865 9999999999999988754
No 438
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-40 Score=369.90 Aligned_cols=216 Identities=25% Similarity=0.368 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecC--CCCHHHHhhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIR--RLQLKWVRRE 432 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~--~~~~~~~r~~ 432 (1230)
|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 689999999963 35999999999999999999999999999999999999999999999999985 3344567889
Q ss_pred eEEEccCcc--ccchhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 433 MGLVSQEHA--LFGTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 433 i~~v~Q~~~--l~~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
|+||+|++. ++..|+.+|+.++.. ..+.++..+ .+.+.++.+ |++........+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHH
Confidence 999999985 567799999987421 112222211 122334444 555555667789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+.+|+++||||||++||+.+...+.+.|++.. +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999998864 58999999999999865 99999999999999999998865
No 439
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=382.39 Aligned_cols=211 Identities=20% Similarity=0.372 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCC----ChHHHh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVREL----DVHWYR 1067 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~lR 1067 (1230)
|++ ||+++|++ . .+ |+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+. +....|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 667 99999953 2 23 99999999999999999999999999999999999999999999998653 245568
Q ss_pred hcceEEcccccCCc-ccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1068 KHTALVSQEPVIYA-GNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~-gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
++++||||++.+|. .|++||+.++.....++++.++++..++.++.++ ...+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDR-----------YPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHHHHH
Confidence 89999999999996 5999999987544445667777777777655443 34589999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
++|++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 99999999999999999999999999998753 7899999999998865 7999999999999999999998764
No 440
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.4e-40 Score=366.99 Aligned_cols=213 Identities=22% Similarity=0.334 Sum_probs=175.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc--ccCCCCeEEECCeecCCCChHHH-hh
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRF--YDVEQGSVRVDGMDVRELDVHWY-RK 1068 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl--~~p~~G~I~idG~di~~i~~~~l-R~ 1068 (1230)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 4599999999999999999999999999999999999 47999999999999988877654 45
Q ss_pred cceEEcccccCCcc-cHHHHhccCCC---C------CC----HHHHHHHHHHhchHHHHHhccccccccccCCCC-CCCh
Q 000909 1069 HTALVSQEPVIYAG-NIRDNIVFGKL---D------AS----ENEVVEAARAANAHEFISSLKDGYETECGERGV-QLSG 1133 (1230)
Q Consensus 1069 ~i~~VpQdp~Lf~g-TIreNl~~g~~---~------~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~-~LSg 1133 (1230)
.++|+||+|.+|.+ |+++|+.+... . .+ ++++.++++..++.+. ....... .|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~~LS~ 147 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEE----------FLNRSVNEGFSG 147 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchh----------hcccccccCcCH
Confidence 59999999999886 89999865311 0 11 1223344444443211 1112222 5999
Q ss_pred hHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh--cCEEEEEeCcEEEEec
Q 000909 1134 GQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK--LDSIALVADGRVVERG 1210 (1230)
Q Consensus 1134 GQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~--~D~I~vl~~G~Ive~G 1210 (1230)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999875 47899999999999986 7999999999999999
Q ss_pred CHhHHhh
Q 000909 1211 TYAQLTH 1217 (1230)
Q Consensus 1211 t~~eLl~ 1217 (1230)
++++.-.
T Consensus 228 ~~~~~~~ 234 (243)
T TIGR01978 228 DVELAKE 234 (243)
T ss_pred CHHHhcc
Confidence 9986543
No 441
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.8e-40 Score=356.98 Aligned_cols=202 Identities=32% Similarity=0.546 Sum_probs=175.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
++++||+++|+. +++|+||++++||.+||+||||||||||+++|+|+++|++|+|.+||.++.+.+ .+|++++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999997654 4678899
Q ss_pred EEcccccCCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGK-LD-----ASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~-~~-----~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
||||+|.+|.+ |++||+.++. +. ..++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999875 9999997531 11 12345667788888776655443 4799999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecC
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1211 (1230)
++++|+++||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 7899999999999865 79999999999999874
No 442
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-40 Score=366.58 Aligned_cols=220 Identities=27% Similarity=0.400 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCCCC-HH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRRLQ-LK 427 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~~~-~~ 427 (1230)
.++++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999973 4699999999999999999999999999999999999986 7999999999987653 45
Q ss_pred HHhhheEEEccCccccchhHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHHH
Q 000909 428 WVRREMGLVSQEHALFGTSIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 428 ~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqri 502 (1230)
.+++.++|++|++.+|+.|++||+.++.. ..+.++..+.+ .+.++.+ ++.+.+.+.+.+.+||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999987532 12233322211 2223333 22223456778889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+||||++.+|+++||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987667899999999999865 999999999999999999999764
No 443
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=4.1e-40 Score=367.56 Aligned_cols=224 Identities=23% Similarity=0.375 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCee-----cCCCChHH
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMD-----VRELDVHW 1065 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~i~~~~ 1065 (1230)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999963 359999999999999999999999999999999999999999999999999 87776654
Q ss_pred ----HhhcceEEccccc--CCc-ccHHHHhccCC---CCCCHHHHHHHHHHhchHHHHHhcccccc-ccccCCCCCCChh
Q 000909 1066 ----YRKHTALVSQEPV--IYA-GNIRDNIVFGK---LDASENEVVEAARAANAHEFISSLKDGYE-TECGERGVQLSGG 1134 (1230)
Q Consensus 1066 ----lR~~i~~VpQdp~--Lf~-gTIreNl~~g~---~~~sd~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgG 1134 (1230)
+|+.++||||+|. ++. .|+++|+.+.. ......++.+ ...++++.++ ++ +.....+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~~--l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERVE--IDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHcC--CChhHHhCCCccCCHH
Confidence 3567999999984 333 48888885321 0111122211 1244555542 32 3455677899999
Q ss_pred HHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecC
Q 000909 1135 QRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1135 QrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt 1211 (1230)
||||++||||++++|+||||||||++||+++.+.+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998653 789999999999997 489999999999999999
Q ss_pred HhHHhhcc-cccHH
Q 000909 1212 YAQLTHMR-GAFFN 1224 (1230)
Q Consensus 1212 ~~eLl~~~-g~y~~ 1224 (1230)
++++..++ ..|.+
T Consensus 236 ~~~~~~~~~~~~~~ 249 (258)
T PRK11701 236 TDQVLDDPQHPYTQ 249 (258)
T ss_pred HHHHhcCCCCHHHH
Confidence 99998653 33543
No 444
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.9e-40 Score=358.83 Aligned_cols=206 Identities=33% Similarity=0.512 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH---HHHhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL---KWVRR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~---~~~r~ 431 (1230)
|+++|++++|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 359999999999999999999999999999999999999999999999999987654 34678
Q ss_pred heEEEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 432 EMGLVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
.++|++|++.+|+. |++||+.++.. ..+.++..+ .+.+.++.+ |++........+||||||||++||||+
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 89999999999975 99999987531 112222111 223344444 666556677789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeE
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCL 569 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i 569 (1230)
+.+|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999998863 58999999999999976 999999999974
No 445
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-40 Score=367.68 Aligned_cols=219 Identities=24% Similarity=0.387 Sum_probs=187.4
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRRE 432 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~ 432 (1230)
..|+++|++++|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 46999999999973 359999999999999999999999999999999999999999999999999988888888889
Q ss_pred eEEEccCccccc-hhHHHHHhcCCCCC-----CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 433 MGLVSQEHALFG-TSIKDNIMFGKLDA-----TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 433 i~~v~Q~~~l~~-~ti~~Ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
++|++|++.+|. .|++||+.++.... ...+ .....+.+.++.+ |++......+.+||||||||++|||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lar 156 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRK----EDEEAVTKAMQAT--GITHLADQSVDTLSGGQRQRAWIAM 156 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCH----HHHHHHHHHHHHc--CCHHHhcCCcccCChHHHHHHHHHH
Confidence 999999998875 59999998753111 0001 0111223344444 6666667788899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
|++++|+++||||||++||+.+...+.+.|.++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 157 VLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 9999999999999999999999999999998864 37899999999998865 99999999999999999998865
No 446
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-40 Score=363.79 Aligned_cols=220 Identities=29% Similarity=0.427 Sum_probs=183.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecC-CCCHH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIR-RLQLK 427 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~-~~~~~ 427 (1230)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4599999999999999999999999999999999999986 5999999999985 44566
Q ss_pred HHhhheEEEccCccccchhHHHHHhcCCCC--CC-HHHHHHHHHHHhHHHHHHh--CCCcccchhcCCCCCCChhHHHHH
Q 000909 428 WVRREMGLVSQEHALFGTSIKDNIMFGKLD--AT-MDEVIAAATAANAHNFIRQ--LPEGYETKVGERGALLSGGQKQRI 502 (1230)
Q Consensus 428 ~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~~-~~~~~~~~~~~~~~~~i~~--l~~g~~t~~~~~g~~LSgGqkqri 502 (1230)
.+|+.++|++|++.+|+.|++||+.++... .. .++..+. +.+.++. +++++.+.....+.+||||||||+
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv 154 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEV-----VERSLRGAALWDEVKDRLKSHAFGLSGGQQQRL 154 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHH-----HHHHHHHcCCchhhhHHhhcCcccCCHHHHHHH
Confidence 788899999999999999999999876321 11 1111111 1111221 222233456677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 503 AIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 503 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+||||++.+|+++||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 155 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 234 (249)
T PRK14253 155 CIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFSN 234 (249)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 9999999999999999999999999999999999988767999999999999876 999999999999999999888653
No 447
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=368.84 Aligned_cols=217 Identities=32% Similarity=0.511 Sum_probs=183.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC--CCHHHHhhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR--LQLKWVRRE 432 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~--~~~~~~r~~ 432 (1230)
|+++|++++|++ .+++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999963 2359999999999999999999999999999999999999999999999999853 234567889
Q ss_pred eEEEccCc--cccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 433 MGLVSQEH--ALFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 433 i~~v~Q~~--~l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
|+|++|++ .+|+.|++||+.++... .+.++..+ .+.+.++.+ |++......+.+||||||||++||||+
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral 152 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGIL 152 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999997 47788999999875321 12222211 123344444 565555667789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+.+|+++||||||++||+.+...+.+.+.++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 153 AMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999998864 48999999999999875 99999999999999999999865
No 448
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.7e-40 Score=376.34 Aligned_cols=200 Identities=26% Similarity=0.417 Sum_probs=173.3
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcceEEcccccCCcc-cHH
Q 000909 1007 ALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAG-NIR 1085 (1230)
Q Consensus 1007 ~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~g-TIr 1085 (1230)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999976 445678999999999999876 999
Q ss_pred HHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeecccC
Q 000909 1086 DNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATS 1159 (1230)
Q Consensus 1086 eNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~p~ILlLDEaTS 1159 (1230)
||+.+... ..+ ++++.++++..++.+.. .....+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAA-----------DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99976321 122 23455566666654432 23345799999999999999999999999999999
Q ss_pred CcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1160 ALDVQSEQVVQEALDRIM-MGRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1160 aLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
+||+.+.+.+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 47999999999999875 899999999999999999999765
No 449
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-40 Score=376.48 Aligned_cols=230 Identities=21% Similarity=0.303 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCC-CCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC----CCCceEEECCeecCCCCHHH
Q 000909 354 EIEFEHVKFSYPSR-PDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD----ADDGIVRIDGVDIRRLQLKW 428 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~i~~~~~~~ 428 (1230)
-|+++|++++|+.+ ....+++|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.+||+++.+.+...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 37899999999632 12469999999999999999999999999999999999986 58999999999998887655
Q ss_pred Hh----hheEEEccCcc--ccc-hhHHHHHhcCCC---C-----CCHHHHHHHHHHHhHHHHHHhCCCccc---chhcCC
Q 000909 429 VR----REMGLVSQEHA--LFG-TSIKDNIMFGKL---D-----ATMDEVIAAATAANAHNFIRQLPEGYE---TKVGER 490 (1230)
Q Consensus 429 ~r----~~i~~v~Q~~~--l~~-~ti~~Ni~~~~~---~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~~ 490 (1230)
++ +.|+||+|+|. +++ .||.+|+..... . ...++. ...+.+.++.+ |++ ......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~--gL~~~~~~~~~~ 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRV--GIKDHKDAMRSF 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHC--CCCChHHHHhCC
Confidence 43 47999999996 333 489999874210 0 000111 12234556665 654 235677
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCC
Q 000909 491 GALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNG 567 (1230)
Q Consensus 491 g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G 567 (1230)
+.+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 88999999999999999999999999999999999999999999999865 38999999999999976 9999999999
Q ss_pred eEEEecChhHHHhhcCcHHHHHH
Q 000909 568 CLVEIGTHNDLINRIDGHYAKMA 590 (1230)
Q Consensus 568 ~i~~~g~~~~l~~~~~~~~~~~~ 590 (1230)
+|++.|+.+++.+++...|.+.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~~l 258 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQAL 258 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHHHH
Confidence 99999999999876556676543
No 450
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.4e-40 Score=366.12 Aligned_cols=221 Identities=25% Similarity=0.409 Sum_probs=186.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999963 45999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEccCccc-cchhHHHHHhcCCCCCCH-HHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 435 LVSQEHAL-FGTSIKDNIMFGKLDATM-DEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 435 ~v~Q~~~l-~~~ti~~Ni~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
|++|++.+ +..|++||+.++...... ...........+.+.++.+ |+.......+..||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999865 457999999886321100 0000000112234455555 6666667788899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 513 VILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
+++||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999998864 47899999999999954 99999999999999999988764
No 451
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=7.6e-40 Score=365.39 Aligned_cols=225 Identities=24% Similarity=0.370 Sum_probs=186.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCee-----cCCCCHHH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVD-----IRRLQLKW 428 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~-----i~~~~~~~ 428 (1230)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999964 359999999999999999999999999999999999999999999999998 77766543
Q ss_pred ----HhhheEEEccCcc--ccc-hhHHHHHhcCC---CCCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChh
Q 000909 429 ----VRREMGLVSQEHA--LFG-TSIKDNIMFGK---LDATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGG 497 (1230)
Q Consensus 429 ----~r~~i~~v~Q~~~--l~~-~ti~~Ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgG 497 (1230)
+++.++|++|++. ++. .|+.+|+.+.. ......+.. ..+.++++.+ |++ +..++.+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 443 48899986421 011112221 2245667777 554 4678889999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecC
Q 000909 498 QKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGT 574 (1230)
Q Consensus 498 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 574 (1230)
||||++||||++.+|++|||||||++||+.+.+.+.+.+++.. .|.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998764 38899999999999975 99999999999999999
Q ss_pred hhHHHhhcCcHHHH
Q 000909 575 HNDLINRIDGHYAK 588 (1230)
Q Consensus 575 ~~~l~~~~~~~~~~ 588 (1230)
++++.......|.+
T Consensus 236 ~~~~~~~~~~~~~~ 249 (258)
T PRK11701 236 TDQVLDDPQHPYTQ 249 (258)
T ss_pred HHHHhcCCCCHHHH
Confidence 99987643334443
No 452
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.8e-40 Score=357.80 Aligned_cols=205 Identities=34% Similarity=0.539 Sum_probs=172.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH---HHhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK---WVRR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~---~~r~ 431 (1230)
|+++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 689999999952 24699999999999999999999999999999999999999999999999999877543 4678
Q ss_pred heEEEccCccccc-hhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 432 EMGLVSQEHALFG-TSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~-~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
.++|++|++.+|. .|++||+.++... ...++.. ..+.+.++.+ |+.........+||||||||++|||||
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al 152 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQ-----RRVGAALRQV--GLEHKADAFPEQLSGGEQQRVAIARAI 152 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 9999999999986 5999999875211 1111111 1223344444 555445566679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCe
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGC 568 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~ 568 (1230)
+.+|+++||||||++||+.+...+.+.+++.. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 153 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 153 VNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred hCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999998864 58999999999999976 99999999985
No 453
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.1e-40 Score=366.46 Aligned_cols=211 Identities=26% Similarity=0.414 Sum_probs=180.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC---CCeEEECCeecCCC-----C
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVE---QGSVRVDGMDVREL-----D 1062 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~i-----~ 1062 (1230)
-|+++||+++|++ .++|+|+||++++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 46999999999999999999999999999999999999986 49999999998654 3
Q ss_pred hHHHhhcceEEcccccCCc-ccHHHHhccCCCCC--------------CHHHHHHHHHHhchHHHHHhccccccccccCC
Q 000909 1063 VHWYRKHTALVSQEPVIYA-GNIRDNIVFGKLDA--------------SENEVVEAARAANAHEFISSLKDGYETECGER 1127 (1230)
Q Consensus 1063 ~~~lR~~i~~VpQdp~Lf~-gTIreNl~~g~~~~--------------sd~ei~~al~~a~l~~~i~~lp~gldt~vge~ 1127 (1230)
...+|++++|+||++.+|. .|+++|+.++.... ..+++.++++..++.+.. ...
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFA-----------HQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHH-----------hCC
Confidence 4567889999999999887 59999998653210 122345555555554433 334
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCc
Q 000909 1128 GVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIK-KLDSIALVADG 1204 (1230)
Q Consensus 1128 G~~LSgGQrQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G 1204 (1230)
...||||||||++||||++.+|++|||||||++||+++.+.+.+.|++.. +|+|+|++||+++.+. .||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 56799999999999999999999999999999999999999999999875 3799999999999865 58999999999
Q ss_pred EEEEecCHhHH
Q 000909 1205 RVVERGTYAQL 1215 (1230)
Q Consensus 1205 ~Ive~Gt~~eL 1215 (1230)
++++.|+++++
T Consensus 230 ~i~~~g~~~~~ 240 (262)
T PRK09984 230 HVFYDGSSQQF 240 (262)
T ss_pred EEEEeCCHHHh
Confidence 99999999997
No 454
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1e-39 Score=356.27 Aligned_cols=208 Identities=28% Similarity=0.495 Sum_probs=175.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH---HHhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK---WVRR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~---~~r~ 431 (1230)
|+++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 689999999952 24599999999999999999999999999999999999999999999999999876543 3678
Q ss_pred heEEEccCcccc-chhHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 432 EMGLVSQEHALF-GTSIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 432 ~i~~v~Q~~~l~-~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
.++|++|++.++ +.|++||+.++.. ..+.++..+. +.+.++.+ |++........+||||||||++||||+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAV 152 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHH
Confidence 999999999875 5699999987531 1222222221 12334444 565556677789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEE
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVE 571 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~ 571 (1230)
+.+|+++||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||+|++|++|+++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 153 VNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999998864 47899999999999976 99999999999864
No 455
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.6e-40 Score=361.69 Aligned_cols=214 Identities=24% Similarity=0.436 Sum_probs=170.5
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCCCeEEECCeecCCCChHHHh
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD---VEQGSVRVDGMDVRELDVHWYR 1067 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~lR 1067 (1230)
++|+||+|+|+... .+++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999997542 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred hcceEEcccccCCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHH-HHHhccccccccccCCCCCCChhHHHHHHHHHHH
Q 000909 1068 KHTALVSQEPVIYAG-NIRDNIVFGKLDASENEVVEAARAANAHE-FISSLKDGYETECGERGVQLSGGQRQRIAIARAI 1145 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~g-TIreNl~~g~~~~sd~ei~~al~~a~l~~-~i~~lp~gldt~vge~G~~LSgGQrQrlalARAl 1145 (1230)
++++|+||++.+|.+ |++||+.++...........+.+....++ .++.+ +++.........||||||||++||||+
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999986421100000000000001111 22221 233233345678999999999999999
Q ss_pred ccCCCEEEeecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCc-hhh-hhcCEEEEEeCcEEEEec
Q 000909 1146 IRNPTILLLDEATSALDVQSEQVVQEALDRIM-MGRTTIVVAHRL-NTI-KKLDSIALVADGRVVERG 1210 (1230)
Q Consensus 1146 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl-~ti-~~~D~I~vl~~G~Ive~G 1210 (1230)
+++|++|||||||++||+.+.+.+.+.+++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 478999999998 354 568999999999999876
No 456
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-40 Score=363.68 Aligned_cols=220 Identities=30% Similarity=0.472 Sum_probs=182.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCCC--CH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRRL--QL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~~--~~ 426 (1230)
-|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 4599999999999999999999999999999999999984 899999999998653 33
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCC--C-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLD--A-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..+++.++|++|++.+|+.|++||+.++... . ..++..+. +.+.++.+ .+.++...++.+.+||||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr 154 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRI-----VEESLKKAALWDEVKSELNKPGTRLSGGQQQR 154 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCCchhHHHHhCChhhcCHHHHHH
Confidence 4667899999999999999999999875211 1 11111111 11222222 1111234677888999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++.+|+++||||||++||+.+...+.+.|.+..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 155 ~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14262 155 LCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVE 234 (250)
T ss_pred HHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 99999999999999999999999999999999999987778999999999998755 99999999999999999999876
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
.
T Consensus 235 ~ 235 (250)
T PRK14262 235 R 235 (250)
T ss_pred C
Confidence 4
No 457
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=362.95 Aligned_cols=220 Identities=29% Similarity=0.404 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCCC--CH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRRL--QL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~~--~~ 426 (1230)
.|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3599999999999999999999999999999999999885 799999999998653 34
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCC--C-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLD--A-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..+++.++|++|++.+|+.|++||+.++... . +.++..+ .+.+.++.+ .+++.........+||||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 155 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDK-----IVEWALKKAALWDEVKDDLKKSALKLSGGQQQR 155 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHH-----HHHHHHHHcCCchhhhhHhhCCcccCCHHHHHH
Confidence 5678899999999999999999999875321 1 1111111 111222222 1123344567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++.+|+|+||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14270 156 LCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIFL 235 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987667999999999999876 99999999999999999999876
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
.
T Consensus 236 ~ 236 (251)
T PRK14270 236 E 236 (251)
T ss_pred C
Confidence 4
No 458
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=364.01 Aligned_cols=225 Identities=31% Similarity=0.438 Sum_probs=183.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDAD-----DGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~i~~--~~~ 426 (1230)
-++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3789999999963 46999999999999999999999999999999999999874 8999999999875 344
Q ss_pred HHHhhheEEEccCccccch-hHHHHHhcCCC--CC-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHH
Q 000909 427 KWVRREMGLVSQEHALFGT-SIKDNIMFGKL--DA-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQ 500 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~--~~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkq 500 (1230)
..+|+.++|++|++.+|.. |++||+.++.. .. ..++..+.+. +.+..+ ..++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAE-----RSLRGAALWDEVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHH-----HHHHHcCcchhhhhhhcCCcccCCHHHHH
Confidence 5678899999999999875 99999986432 11 2222222211 112222 112223345667889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHH
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLI 579 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 579 (1230)
|++||||++++|+++||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987668999999999999976 9999999999999999999987
Q ss_pred hhcCcHH
Q 000909 580 NRIDGHY 586 (1230)
Q Consensus 580 ~~~~~~~ 586 (1230)
..+...+
T Consensus 236 ~~~~~~~ 242 (252)
T PRK14272 236 TNPRDER 242 (252)
T ss_pred hCcCcHH
Confidence 6433333
No 459
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-40 Score=357.64 Aligned_cols=205 Identities=24% Similarity=0.454 Sum_probs=175.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
++++|++++|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. .+++.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999963 459999999999999999999999999999999999999999999999988753 4577899
Q ss_pred EEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|++|++.++.+ |++||+.++.. .....+. ...+.+.++.+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999999875 99999986421 1111111 12334556666 777777788889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
|+++||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998764 57899999999999865 9999999999998764
No 460
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=5.3e-40 Score=343.21 Aligned_cols=172 Identities=40% Similarity=0.671 Sum_probs=161.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999742 245999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCE
Q 000909 435 LVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVI 514 (1230)
Q Consensus 435 ~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 514 (1230)
|++|++.+|+.|++||+ ||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhccCEEEEEeCCeE
Q 000909 515 LLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRNADLIAVVDNGCL 569 (1230)
Q Consensus 515 lllDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i 569 (1230)
+||||||++||+.+...+.+.+++.. +|+|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998864 48999999999999988999999999974
No 461
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.9e-40 Score=380.37 Aligned_cols=235 Identities=30% Similarity=0.421 Sum_probs=191.7
Q ss_pred ccEEEEEEEEECCCC--------CCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCee--cC
Q 000909 353 GEIEFEHVKFSYPSR--------PDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVD--IR 422 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~--------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~--i~ 422 (1230)
.-++++|+++.|..+ ....+++||||++++||++||||+||||||||.++|+|+.+|++|+|.++|.+ ++
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 357899999999742 12468999999999999999999999999999999999999999999999987 23
Q ss_pred CCCHHHHhhheEEEccCcc--ccc-hhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccc-hhcCCCCCCChhH
Q 000909 423 RLQLKWVRREMGLVSQEHA--LFG-TSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYET-KVGERGALLSGGQ 498 (1230)
Q Consensus 423 ~~~~~~~r~~i~~v~Q~~~--l~~-~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~~LSgGq 498 (1230)
.-+....|+++-+|+|||+ |-+ .||+++|.-......... .+.+.+.+.+.++.. |+.. ..+..+.+|||||
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~V--gL~~~~l~ryP~elSGGQ 434 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELV--GLPPEFLDRYPHELSGGQ 434 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHc--CCCHHHHhcCchhcCcch
Confidence 2235567889999999996 443 499999974321000000 112222333334433 5554 5788999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecCh
Q 000909 499 KQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTH 575 (1230)
Q Consensus 499 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 575 (1230)
||||||||||..+|+++|+|||||+||+-+...+.+.|+++. .|.|.|+|||+++.++. ||||.||++|+|||.|+.
T Consensus 435 rQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~ 514 (539)
T COG1123 435 RQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPT 514 (539)
T ss_pred hHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCH
Confidence 999999999999999999999999999999999999998864 48999999999999988 999999999999999999
Q ss_pred hHHHhhcCcHHHHHHH
Q 000909 576 NDLINRIDGHYAKMAK 591 (1230)
Q Consensus 576 ~~l~~~~~~~~~~~~~ 591 (1230)
+++.+++...|.+...
T Consensus 515 ~~v~~~p~h~Ytr~L~ 530 (539)
T COG1123 515 EKVFENPQHPYTRKLL 530 (539)
T ss_pred HHHhcCCCChHHHHHH
Confidence 9999887888876543
No 462
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-40 Score=365.62 Aligned_cols=219 Identities=29% Similarity=0.443 Sum_probs=182.9
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCC--CC
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRR--LQ 425 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~--~~ 425 (1230)
+.|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36999999999963 3599999999999999999999999999999999999985 48999999999864 34
Q ss_pred HHHHhhheEEEccCccccchhHHHHHhcCCCC---CCHH----HHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhH
Q 000909 426 LKWVRREMGLVSQEHALFGTSIKDNIMFGKLD---ATMD----EVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQ 498 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 498 (1230)
...++++++|++|++.+|+.|++||+.++... .... .+.++++..++.+ ++....+..+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQ-------EVKDKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcc-------hhhhHhcCCcccCCHHH
Confidence 56678899999999999999999999875211 1111 1222222222211 12234567778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEe-----CCeEEEe
Q 000909 499 KQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVD-----NGCLVEI 572 (1230)
Q Consensus 499 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~-----~G~i~~~ 572 (1230)
|||++||||++++|+++||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999987767999999999999876 99999998 5999999
Q ss_pred cChhHHHhh
Q 000909 573 GTHNDLINR 581 (1230)
Q Consensus 573 g~~~~l~~~ 581 (1230)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999998754
No 463
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-40 Score=365.42 Aligned_cols=221 Identities=24% Similarity=0.397 Sum_probs=186.8
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC--------CceEEECCeecCCCCH
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDAD--------DGIVRIDGVDIRRLQL 426 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~--------~G~i~~~g~~i~~~~~ 426 (1230)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 689999999963 35999999999999999999999999999999999999998 9999999999988887
Q ss_pred HHHhhheEEEccCcc-ccchhHHHHHhcCCCCC-CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHH
Q 000909 427 KWVRREMGLVSQEHA-LFGTSIKDNIMFGKLDA-TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAI 504 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~-l~~~ti~~Ni~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~i 504 (1230)
..+++.++|++|++. +|..|++||+.++.... .............+.+.++.+ |+++..+....+||||||||++|
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQF 156 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 788888999999986 56789999998763211 000000000112233455555 78888888899999999999999
Q ss_pred HHHhc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEe
Q 000909 505 ARAII---------KNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEI 572 (1230)
Q Consensus 505 ARal~---------~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~ 572 (1230)
||||+ .+|++|||||||++||+.+.+.+.+.+++..+ ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~ 236 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAH 236 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999 59999999999999999999999999988643 7999999999999865 999999999999999
Q ss_pred cChhHHHh
Q 000909 573 GTHNDLIN 580 (1230)
Q Consensus 573 g~~~~l~~ 580 (1230)
|+++++.+
T Consensus 237 g~~~~~~~ 244 (272)
T PRK13547 237 GAPADVLT 244 (272)
T ss_pred cCHHHHcC
Confidence 99998865
No 464
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=8.6e-40 Score=358.49 Aligned_cols=212 Identities=30% Similarity=0.430 Sum_probs=177.8
Q ss_pred cEEEEEEEEECCCCCC-CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH---H
Q 000909 354 EIEFEHVKFSYPSRPD-SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW---V 429 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~---~ 429 (1230)
-|+++|++++|++... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999974221 25899999999999999999999999999999999999999999999999998876543 2
Q ss_pred -hhheEEEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHH
Q 000909 430 -RREMGLVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIA 505 (1230)
Q Consensus 430 -r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iA 505 (1230)
++.++|++|++.++.. |++||+.++.. .....+. ...+.+.++.+ |++........+||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3579999999999875 99999986421 1111111 12233455555 666556677789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhccCEEEEEeCCeEEEe
Q 000909 506 RAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRNADLIAVVDNGCLVEI 572 (1230)
Q Consensus 506 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 572 (1230)
|||+.+|+++||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999998863 37899999999999888999999999999864
No 465
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6e-40 Score=367.26 Aligned_cols=226 Identities=27% Similarity=0.440 Sum_probs=186.1
Q ss_pred EEEEEEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCCh--
Q 000909 992 IEMRRVDFAYPSR------PDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDV-- 1063 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~-- 1063 (1230)
|+++||+++|+.. .++++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8999999999631 03469999999999999999999999999999999999999999999999999988765
Q ss_pred -HHHhhcceEEccccc--CC-cccHHHHhccCCC---CCCHHHHHHHHHHhchHHHHHhccccccc-cccCCCCCCChhH
Q 000909 1064 -HWYRKHTALVSQEPV--IY-AGNIRDNIVFGKL---DASENEVVEAARAANAHEFISSLKDGYET-ECGERGVQLSGGQ 1135 (1230)
Q Consensus 1064 -~~lR~~i~~VpQdp~--Lf-~gTIreNl~~g~~---~~sd~ei~~al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQ 1135 (1230)
..+|+.++|+||++. ++ ..|+++|+.+... +.+.+ .....+.+.++.+ |+++ ........|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge 156 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKA-----ERLARASEMLRAV--DLDDSVLDKRPPQLSGGQ 156 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHH-----HHHHHHHHHHHHc--CCChhHhhCCCccCChHH
Confidence 357889999999983 43 4699999864210 11111 1112234444443 4543 3456677899999
Q ss_pred HHHHHHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCH
Q 000909 1136 RQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTY 1212 (1230)
Q Consensus 1136 rQrlalARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~ 1212 (1230)
|||++|||||+++|+||||||||++||+++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 236 (268)
T PRK10419 157 LQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPV 236 (268)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCCh
Confidence 9999999999999999999999999999999999999998753 7899999999999975 799999999999999999
Q ss_pred hHHhhcccccHH
Q 000909 1213 AQLTHMRGAFFN 1224 (1230)
Q Consensus 1213 ~eLl~~~g~y~~ 1224 (1230)
+++...++.|..
T Consensus 237 ~~~~~~~~~~~~ 248 (268)
T PRK10419 237 GDKLTFSSPAGR 248 (268)
T ss_pred hhccCCCCHHHH
Confidence 999876665543
No 466
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.1e-39 Score=354.95 Aligned_cols=210 Identities=30% Similarity=0.417 Sum_probs=183.7
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCH----HHHhh
Q 000909 356 EFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQL----KWVRR 431 (1230)
Q Consensus 356 ~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~----~~~r~ 431 (1230)
.+.|+.|+|+.+ .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 568999999743 469999999999999999999999999999999999999999999999998876542 34567
Q ss_pred heEEEccCccccchhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 432 EMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
.++|++|++.+|+.|++||+.++.+ ...++..++++..++.+.+..+|.|+++.++....+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999998899999998643 234455667777777778888999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHH--HHHHhc-CCCeEEEEecCchhhhccCEEEEEeCCe
Q 000909 512 PVILLLDEATSALDSESETLVQN--ALDQAS-LGRTTLVVAHKLSTVRNADLIAVVDNGC 568 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~--~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~ 568 (1230)
|+++||||||++||+.+...+.+ .++... .++|+|++||+++.+..||++++|++|.
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999888877 454443 4789999999999998899999999884
No 467
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=7.8e-40 Score=364.16 Aligned_cols=224 Identities=23% Similarity=0.337 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC----CCCeEEECCeecCCCChHHH
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV----EQGSVRVDGMDVRELDVHWY 1066 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p----~~G~I~idG~di~~i~~~~l 1066 (1230)
.|+++||+++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 48999999999 2 2599999999999999999999999999999999999999 999999999998632 223
Q ss_pred hhcceEEccccc-CCc--ccHHHHhccC----CCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1067 RKHTALVSQEPV-IYA--GNIRDNIVFG----KLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1067 R~~i~~VpQdp~-Lf~--gTIreNl~~g----~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
++.++||||+|. .|. .|+.+|+.+. .....+++++++++..++.++ ++.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 343 4888886431 112334566777777766432 1233455678999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHh
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLT 1216 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl 1216 (1230)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998743 789999999999986 48999999999999999999998
Q ss_pred hcc-c-ccHHHhhh
Q 000909 1217 HMR-G-AFFNLATL 1228 (1230)
Q Consensus 1217 ~~~-g-~y~~l~~~ 1228 (1230)
+.. . .++.++..
T Consensus 230 ~~~~~~~~~~~~~~ 243 (254)
T PRK10418 230 NAPKHAVTRSLVSA 243 (254)
T ss_pred hCCCCHHHHHHHHh
Confidence 763 2 23435543
No 468
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.9e-40 Score=358.27 Aligned_cols=202 Identities=30% Similarity=0.495 Sum_probs=169.0
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEE
Q 000909 356 EFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGL 435 (1230)
Q Consensus 356 ~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~ 435 (1230)
+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .++++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 35999999999999999999999999999999999999999999999998764 46778999
Q ss_pred EccCccc---cchhHHHHHhcCCCCC------CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHH
Q 000909 436 VSQEHAL---FGTSIKDNIMFGKLDA------TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIAR 506 (1230)
Q Consensus 436 v~Q~~~l---~~~ti~~Ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iAR 506 (1230)
++|++.+ ++.|++||+.++.... ..++. ...+.+.++.+ |++........+||||||||++|||
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKAD-----KAKVDEALERV--GLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHH
Confidence 9999876 5679999998764311 00111 11233445555 6665566777899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 507 AIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 507 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
||+.+|+++||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++| +++.|
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 146 ALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999998864 68999999999999866 9999999886 55544
No 469
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=7.1e-40 Score=355.53 Aligned_cols=205 Identities=35% Similarity=0.547 Sum_probs=175.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCC--CCHHHHhhh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRR--LQLKWVRRE 432 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~--~~~~~~r~~ 432 (1230)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999964 359999999999999999999999999999999999999999999999999853 345567889
Q ss_pred eEEEccCccccc-hhHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 433 MGLVSQEHALFG-TSIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 433 i~~v~Q~~~l~~-~ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
++|++|++.+|. .|++||+.++.. ....++.. ..+.+.++.+ |++..+.....+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAE-----ERALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999986 599999987531 11222211 1233455665 777777888899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeE
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCL 569 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i 569 (1230)
+.+|+++||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999864 47999999999999965 999999999974
No 470
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=334.57 Aligned_cols=222 Identities=28% Similarity=0.423 Sum_probs=186.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHH-Hhhc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHW-YRKH 1069 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~ 1069 (1230)
-++++||+..|.. .++|++|||++++||.|+++||||+||||++++|+|+.+|.+|+|.++|.||...+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999963 46999999999999999999999999999999999999999999999999999998865 4778
Q ss_pred ceEEcccccCCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHccC
Q 000909 1070 TALVSQEPVIYAG-NIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRN 1148 (1230)
Q Consensus 1070 i~~VpQdp~Lf~g-TIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll~~ 1148 (1230)
|+||||...+|.. ||.|||.+|.....+++-++ ..+++.-+-+|. +.......+.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999975 99999987632211111111 001122222342 33444567889999999999999999999
Q ss_pred CCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhccc
Q 000909 1149 PTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHMRG 1220 (1230)
Q Consensus 1149 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~~g 1220 (1230)
|++|+|||||.+|-|.--+.|.++|+++.+ +.||+.|-++..... -+||.+||++|+|+.+|+.+||.+++.
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 999999999999999999999999999874 569999999999875 579999999999999999999998754
No 471
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=367.31 Aligned_cols=221 Identities=27% Similarity=0.410 Sum_probs=182.5
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCCC--C
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRRL--Q 425 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~~--~ 425 (1230)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 45899999999963 359999999999999999999999999999999999864 4999999999998643 3
Q ss_pred HHHHhhheEEEccCccccchhHHHHHhcCCC--CC-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHH
Q 000909 426 LKWVRREMGLVSQEHALFGTSIKDNIMFGKL--DA-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQ 500 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkq 500 (1230)
...+|++++|++|++.+|+.|++||+.++.. .. +..+..+. +.+.++.+ .+++.......+..|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEI-----VEKSLRKAALWDEVSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHH-----HHHHHHHhCCccchhhHhhCChhhCCHHHHH
Confidence 3457889999999999998899999997632 11 11111111 11222222 111233456778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHH
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLI 579 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 579 (1230)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999987
Q ss_pred hh
Q 000909 580 NR 581 (1230)
Q Consensus 580 ~~ 581 (1230)
++
T Consensus 270 ~~ 271 (286)
T PRK14275 270 TN 271 (286)
T ss_pred hC
Confidence 64
No 472
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=362.26 Aligned_cols=221 Identities=31% Similarity=0.468 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCCC--CH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRRL--QL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~~--~~ 426 (1230)
.++++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||.++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 459999999999999999999999999999999999874 4899999999998753 45
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCC--CC-CHH----HHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKL--DA-TMD----EVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQK 499 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 499 (1230)
..++++++|+||++.+|+.|++||+.++.. .. +.+ ++.++++..++.+++ ....++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEV-------KDKLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhH-------HHHHhCCcccCCHHHH
Confidence 677889999999999999999999987531 11 111 122233333332222 2234677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
||++||||++++|+++||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987778999999999999876 999999999999999999998
Q ss_pred HhhcCc
Q 000909 579 INRIDG 584 (1230)
Q Consensus 579 ~~~~~~ 584 (1230)
...+..
T Consensus 233 ~~~~~~ 238 (250)
T PRK14266 233 FINPKD 238 (250)
T ss_pred HhCCCC
Confidence 754333
No 473
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.2e-39 Score=358.76 Aligned_cols=215 Identities=34% Similarity=0.505 Sum_probs=183.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999973 359999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEccCccccch-hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|+||++.+|++ |++||+.++... .+..+. ...+.+.++.+ |+.........+|||||+||++||||++++
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKI-----KARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVE 148 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999975 999999875421 111111 12234556666 555556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|+++||||||++||+++++.+.+.+.+..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 149 PQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999987643 7999999999999866 999999999999999999998753
No 474
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.5e-40 Score=367.86 Aligned_cols=218 Identities=28% Similarity=0.497 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhhe
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREM 433 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i 433 (1230)
.++++|++++|+. ++.+|+||||+|++||++|++||||||||||+|+|+|+..|++|+|.++|.+...- ....+++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999973 24699999999999999999999999999999999999999999999999998765 67788999
Q ss_pred EEEccCccccch-hHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
||+||+|.+++. |++||+.|... ....+. ....+.+.++.+ |++.....+..+||+|||||++||+||+.
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~-----~~~~~~~~l~~~--~L~~~~~~~~~~lS~G~kqrl~ia~aL~~ 153 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEE-----AEERIEELLELF--GLEDKANKKVRTLSGGMKQRLSIALALLH 153 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhH-----HHHHHHHHHHHc--CCchhhCcchhhcCHHHHHHHHHHHHHhc
Confidence 999999998876 99999986321 011011 111222334444 55543356678899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-C-CeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQASL-G-RTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~-~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+|++|||||||++|||.+...+.+.|+++.+ | +||+++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 154 ~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 154 DPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999998754 5 799999999999987 999999999999999999987653
No 475
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1e-40 Score=330.23 Aligned_cols=223 Identities=25% Similarity=0.432 Sum_probs=192.9
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHH-Hhh
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKW-VRR 431 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~-~r~ 431 (1230)
+.+..+|+.++|.. ++|.+||||++++||+|++.||||+||||.+.++.|+.+|++|+|.+||.||+.++... -|-
T Consensus 3 ~~L~a~~l~K~y~k---r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 3 STLVAENLAKSYKK---RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred cEEEehhhhHhhCC---eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 35788999999974 46999999999999999999999999999999999999999999999999999999765 456
Q ss_pred heEEEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhcc
Q 000909 432 EMGLVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIK 510 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~ 510 (1230)
.|||+||||.+|.+ ||+|||..-.+ ..........++..+++.++.+ .+.......+..||||||.|+.|||||..
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE-~~~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~ 156 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLE-IREKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAA 156 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHh-hhhcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhc
Confidence 89999999999976 99999985432 1111222233444455566666 78888899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchh-hhccCEEEEEeCCeEEEecChhHHHhh
Q 000909 511 NPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLST-VRNADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 511 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~-~~~~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+|+.++||||++++||.+-..|++.++.+. +|--|++.-|+..+ +.-|||.+++.+|++..+|+++|+.++
T Consensus 157 ~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 157 NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 999999999999999999999999998865 57889999999865 566999999999999999999999874
No 476
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=363.94 Aligned_cols=220 Identities=30% Similarity=0.427 Sum_probs=184.7
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCC---
Q 000909 352 RGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRR--- 423 (1230)
Q Consensus 352 ~~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~--- 423 (1230)
.+.|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 457999999999973 3599999999999999999999999999999999999985 79999999988742
Q ss_pred -CCHHHHhhheEEEccCccccchhHHHHHhcCCC--CCCH-----HHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCC
Q 000909 424 -LQLKWVRREMGLVSQEHALFGTSIKDNIMFGKL--DATM-----DEVIAAATAANAHNFIRQLPEGYETKVGERGALLS 495 (1230)
Q Consensus 424 -~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~~~-----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 495 (1230)
.+...+++.++|++|++.+|.+|++||+.++.. .... +++.++++.++ +.+++.+..++...+||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~l~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAA-------LWDEVKDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcC-------CchhhhHHHhCCcccCC
Confidence 344567889999999999998999999987521 1111 12222222221 11234456677888999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecC
Q 000909 496 GGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGT 574 (1230)
Q Consensus 496 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 574 (1230)
||||||++||||++++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999987767899999999999965 99999999999999999
Q ss_pred hhHHHhh
Q 000909 575 HNDLINR 581 (1230)
Q Consensus 575 ~~~l~~~ 581 (1230)
++++...
T Consensus 244 ~~~~~~~ 250 (265)
T PRK14252 244 TDTIFIK 250 (265)
T ss_pred HHHHHhC
Confidence 9998753
No 477
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=362.81 Aligned_cols=220 Identities=30% Similarity=0.453 Sum_probs=182.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~--~~~ 426 (1230)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999974 69999999999853 345
Q ss_pred HHHhhheEEEccCccccc-hhHHHHHhcCCCC---CCHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHH
Q 000909 427 KWVRREMGLVSQEHALFG-TSIKDNIMFGKLD---ATMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQ 500 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~-~ti~~Ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkq 500 (1230)
..+++.++|++|++.+|. .|++||+.++... ...++..+ .+.+.++.+ +.++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~q 155 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDE-----LVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQ 155 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHH-----HHHHHHHHcCCchhhhhHhhCCcccCCHHHHH
Confidence 567889999999999987 4999999865211 11111111 122233333 111234567778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEe------CCeEEEec
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVD------NGCLVEIG 573 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~------~G~i~~~g 573 (1230)
|++||||++.+|+++||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|+ +|++++.|
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~ 235 (258)
T PRK14241 156 RLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEID 235 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecC
Confidence 999999999999999999999999999999999999987667999999999999865 99999997 89999999
Q ss_pred ChhHHHhh
Q 000909 574 THNDLINR 581 (1230)
Q Consensus 574 ~~~~l~~~ 581 (1230)
+++++...
T Consensus 236 ~~~~~~~~ 243 (258)
T PRK14241 236 DTEKIFSN 243 (258)
T ss_pred CHHHHHhC
Confidence 99998753
No 478
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=365.15 Aligned_cols=220 Identities=27% Similarity=0.439 Sum_probs=182.6
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCceEEECCeecCC--CC
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD-----ADDGIVRIDGVDIRR--LQ 425 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~i~~--~~ 425 (1230)
..|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 45899999999963 359999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhhheEEEccCccccchhHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 426 LKWVRREMGLVSQEHALFGTSIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
...++++++|++|++.+|+.|++||+.++... ... +.. ..+.+.++.+ ...+....++++.+||||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~-~~~-----~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDG-DID-----ERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQR 188 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcH-HHH-----HHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHH
Confidence 55678899999999999988999999875211 111 111 1122333333 1112234677788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEE-EEeCCeEEEecChhHHH
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIA-VVDNGCLVEIGTHNDLI 579 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~-~l~~G~i~~~g~~~~l~ 579 (1230)
++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|++++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999988666899999999999876 99975 57999999999999886
Q ss_pred hh
Q 000909 580 NR 581 (1230)
Q Consensus 580 ~~ 581 (1230)
.+
T Consensus 269 ~~ 270 (285)
T PRK14254 269 EN 270 (285)
T ss_pred hC
Confidence 54
No 479
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=377.01 Aligned_cols=211 Identities=26% Similarity=0.411 Sum_probs=181.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCC----CHHHHh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRL----QLKWVR 430 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~----~~~~~r 430 (1230)
|++ |++++|++ . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +....+
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999963 2 23 89999999999999999999999999999999999999999999998653 234467
Q ss_pred hheEEEccCccccc-hhHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhc
Q 000909 431 REMGLVSQEHALFG-TSIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAII 509 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~-~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~ 509 (1230)
++++||+|++.+|+ .|++||+.++......++ +.+.++.+ |++........+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~---------~~~~l~~~--gl~~~~~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQ---------FDKIVALL--GIEPLLDRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHH---------HHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 89999999999996 499999998743221222 23445555 6766677788899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhc
Q 000909 510 KNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRI 582 (1230)
Q Consensus 510 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 582 (1230)
.+|+++|||||||+||+.+++.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 99999999999999999999999999987643 7899999999998866 9999999999999999999998753
No 480
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-39 Score=365.97 Aligned_cols=214 Identities=30% Similarity=0.504 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcc
Q 000909 991 KIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHT 1070 (1230)
Q Consensus 991 ~I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1070 (1230)
.|+++||+.+|.. +..+|+||||+|++||.+|++||||||||||+++|+|+..|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999962 24699999999999999999999999999999999999999999999999998765 77889999
Q ss_pred eEEcccccCCcc-cHHHHhccC-----CC-CCCHHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHH
Q 000909 1071 ALVSQEPVIYAG-NIRDNIVFG-----KL-DASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIAR 1143 (1230)
Q Consensus 1071 ~~VpQdp~Lf~g-TIreNl~~g-----~~-~~sd~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalAR 1143 (1230)
|||||+|.++.. |++|||.|. .+ ...++.+.+.++..++.+.- ......||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHH
Confidence 999999998875 999999863 22 12345677888888876521 2234579999999999999
Q ss_pred HHccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC-C-CeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1144 AIIRNPTILLLDEATSALDVQSEQVVQEALDRIMM-G-RTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1144 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~-~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
||+.+|++|||||||++||+.+...+.+.|+++.+ + +||++.||.++.+.. ||+|++|++|+++..|+++++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999865 4 799999999999987 899999999999999999998765
No 481
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.1e-39 Score=378.30 Aligned_cols=208 Identities=25% Similarity=0.401 Sum_probs=177.6
Q ss_pred EEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCC----hHHHhhcce
Q 000909 996 RVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELD----VHWYRKHTA 1071 (1230)
Q Consensus 996 ~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~----~~~lR~~i~ 1071 (1230)
|++++|++ .. + |+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999963 23 4 999999999999999999999999999999999999999999999987542 345788999
Q ss_pred EEcccccCCcc-cHHHHhccCCCCCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHHHc
Q 000909 1072 LVSQEPVIYAG-NIRDNIVFGKLDAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAII 1146 (1230)
Q Consensus 1072 ~VpQdp~Lf~g-TIreNl~~g~~~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARAll 1146 (1230)
||||++.+|.. |++||+.++..... ++++.+.++..++.++ ......+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHL-----------LGRLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHH
Confidence 99999999975 99999987643222 1234555555555443 33445689999999999999999
Q ss_pred cCCCEEEeecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCcEEEEecCHhHHhhcc
Q 000909 1147 RNPTILLLDEATSALDVQSEQVVQEALDRIMM--GRTTIVVAHRLNTIKK-LDSIALVADGRVVERGTYAQLTHMR 1219 (1230)
Q Consensus 1147 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~ 1219 (1230)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+.
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 223 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASP 223 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCc
Confidence 99999999999999999999999999998753 7899999999999865 7999999999999999999998764
No 482
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.8e-40 Score=357.53 Aligned_cols=214 Identities=23% Similarity=0.374 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC---CCCceEEECCeecCCCCHHHHh
Q 000909 355 IEFEHVKFSYPSRP-DSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD---ADDGIVRIDGVDIRRLQLKWVR 430 (1230)
Q Consensus 355 i~~~~v~~~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~i~~~~~~~~r 430 (1230)
++++||+|+|++.+ .+++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999997542 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred hheEEEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHH-HHHhCCCcccchhcCCCCCCChhHHHHHHHHHHh
Q 000909 431 REMGLVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHN-FIRQLPEGYETKVGERGALLSGGQKQRIAIARAI 508 (1230)
Q Consensus 431 ~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~-~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal 508 (1230)
+.++|++|++.+|++ |++||+.++..........+........+ .++.+ |++....+...+||||||||++||||+
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999987521110000001111111122 34333 555555667789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCc-hhh-hccCEEEEEeCCeEEEec
Q 000909 509 IKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKL-STV-RNADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 509 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l-~~~-~~~d~i~~l~~G~i~~~g 573 (1230)
+++|+++||||||++||+.+...+.+.+++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999998764 478999999998 455 559999999999999875
No 483
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.2e-39 Score=354.96 Aligned_cols=204 Identities=29% Similarity=0.450 Sum_probs=174.5
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChH---HHh
Q 000909 992 IEMRRVDFAYPSRP-DALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVH---WYR 1067 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1067 (1230)
++++||+++|++.. +.++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996321 24699999999999999999999999999999999999999999999999999877653 468
Q ss_pred hcceEEcccccCCc-ccHHHHhccCCC---CCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHH
Q 000909 1068 KHTALVSQEPVIYA-GNIRDNIVFGKL---DASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRI 1139 (1230)
Q Consensus 1068 ~~i~~VpQdp~Lf~-gTIreNl~~g~~---~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1139 (1230)
+.++|+||+|.+|. .|+.+|+.++.. ..+.+ ++.++++..++.+++.+ ...+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDY-----------YPHNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhc-----------ChhhCCHHHHHHH
Confidence 89999999999987 699999986431 12222 34555555555554443 3457999999999
Q ss_pred HHHHHHccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCcEE
Q 000909 1140 AIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKKLDSIALVADGRV 1206 (1230)
Q Consensus 1140 alARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~I 1206 (1230)
+||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999875 37999999999998878899999999986
No 484
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-40 Score=339.51 Aligned_cols=220 Identities=28% Similarity=0.438 Sum_probs=191.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHH-hhhe
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWV-RREM 433 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~-r~~i 433 (1230)
++.++++++|++ -.+++||||++++||+++|+|||||||||++|+|.|+|+|++|+|.++|+||...++..+ |..|
T Consensus 5 L~v~~l~k~FGG---l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 5 LEVRGLSKRFGG---LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeccceeecCC---EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 678999999974 459999999999999999999999999999999999999999999999999999987664 5679
Q ss_pred EEEccCccccch-hHHHHHhcCCCCC-----------CHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHH
Q 000909 434 GLVSQEHALFGT-SIKDNIMFGKLDA-----------TMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 434 ~~v~Q~~~l~~~-ti~~Ni~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
+--||.+.+|++ ||.||+..+.... ...+..++ ...+.+.++.+ |++...++...+||+||+.|
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~--~e~A~~~Le~v--gL~~~a~~~A~~LsyG~qR~ 157 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREA--RERARELLEFV--GLGELADRPAGNLSYGQQRR 157 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHH--HHHHHHHHHHc--CCchhhcchhhcCChhHhHH
Confidence 999999999976 9999998763211 00111111 22334556666 89989999999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHH
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDL 578 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 578 (1230)
+.|||||+.+|++|+||||.+++.+.....+.+.|+++.+ |.|+++|.||++.+.. ||||+||+.|+++.+|+|+|+
T Consensus 158 LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV 237 (250)
T COG0411 158 LEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEV 237 (250)
T ss_pred HHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHH
Confidence 9999999999999999999999999999999999998764 5899999999999977 999999999999999999999
Q ss_pred Hhh
Q 000909 579 INR 581 (1230)
Q Consensus 579 ~~~ 581 (1230)
.++
T Consensus 238 ~~d 240 (250)
T COG0411 238 RNN 240 (250)
T ss_pred hcC
Confidence 875
No 485
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=361.77 Aligned_cols=202 Identities=29% Similarity=0.465 Sum_probs=171.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +.+++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 3599999999999999999999999999999999999999999999999998653 34689
Q ss_pred EEcccccCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYA-GNIRDNIVFGKL--DAS----ENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
|+||++.+|. .|+++|+.++.. ... ++++.++++..++.+.. .....+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAE-----------KRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------hCChhhCCHHHHHHHHHHHH
Confidence 9999999887 599999986421 112 22345555555554432 23456899999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEe--CcEEEEecCH
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIM--MGRTTIVVAHRLNTIKK-LDSIALVA--DGRVVERGTY 1212 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~--~G~Ive~Gt~ 1212 (1230)
|+++|++|||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+.. ||+|++|+ +|+|++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999863 38999999999999865 79999998 5999998754
No 486
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.8e-39 Score=361.66 Aligned_cols=220 Identities=27% Similarity=0.426 Sum_probs=183.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC---CceEEECCeecCCC-----C
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDAD---DGIVRIDGVDIRRL-----Q 425 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~i~~~-----~ 425 (1230)
-|+++||+++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 45999999999999999999999999999999999999986 49999999998653 2
Q ss_pred HHHHhhheEEEccCccccch-hHHHHHhcCCCCCCH--H---HHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHH
Q 000909 426 LKWVRREMGLVSQEHALFGT-SIKDNIMFGKLDATM--D---EVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQK 499 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~~~~--~---~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 499 (1230)
...+++.++|++|++.+|.. |++||+.++...... . ..........+.+.++.+ |++........+||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHH
Confidence 35567889999999998874 999999976421100 0 000011122344556665 676667778889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChh
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHN 576 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 576 (1230)
||++||||++.+|++|||||||++||+++.+.+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999864 38999999999998755 9999999999999999999
Q ss_pred HH
Q 000909 577 DL 578 (1230)
Q Consensus 577 ~l 578 (1230)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 86
No 487
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1e-39 Score=371.70 Aligned_cols=204 Identities=26% Similarity=0.450 Sum_probs=175.6
Q ss_pred CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheEEEccCccccch-hHH
Q 000909 370 SIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGT-SIK 448 (1230)
Q Consensus 370 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~-ti~ 448 (1230)
+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+++||++|++.++.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 459999999999999999999999999999999999999999999999999876 345678899999999999876 999
Q ss_pred HHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 000909 449 DNIMFGKL--DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDS 526 (1230)
Q Consensus 449 ~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~ 526 (1230)
||+.+... ..+.++.. ..+.+.++.+ |++........+||||||||++|||||+.+|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAE-----ERAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 99986421 11222211 1233455665 666666777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 527 ESETLVQNALDQAS-LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 527 ~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
.+.+.+.+.+++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999998864 58999999999999976 999999999999999999998653
No 488
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=362.25 Aligned_cols=221 Identities=28% Similarity=0.439 Sum_probs=182.9
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CceEEECCeecCC--CC
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDAD-----DGIVRIDGVDIRR--LQ 425 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~i~~--~~ 425 (1230)
+.|+++|++++|++ +.+|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 35899999999999999999999999999999999999985 8999999999853 34
Q ss_pred HHHHhhheEEEccCccccchhHHHHHhcCCCC--C-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHH
Q 000909 426 LKWVRREMGLVSQEHALFGTSIKDNIMFGKLD--A-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQ 500 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkq 500 (1230)
...+++.++|++|++.+|+.|++||+.++... . +..+..+ .+.+.++.+ .+.++...++.+.+|||||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~q 157 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDD-----IVESALKDADLWDEIKHKIHKSALDLSGGQQQ 157 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHH-----HHHHHHHHcCCcchhhhHhcCCcccCCHHHHH
Confidence 45678899999999999999999999865211 0 1111111 111222222 112233467788899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeC-----CeEEEe
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDN-----GCLVEI 572 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~-----G~i~~~ 572 (1230)
|++||||++++|+++||||||++||+.+...+.+.++++. .++|+|+|||+++.+.. ||+|++|++ |++++.
T Consensus 158 rv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 237 (261)
T PRK14258 158 RLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEF 237 (261)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEe
Confidence 9999999999999999999999999999999999998753 48999999999999875 999999999 999999
Q ss_pred cChhHHHhh
Q 000909 573 GTHNDLINR 581 (1230)
Q Consensus 573 g~~~~l~~~ 581 (1230)
|+++++.+.
T Consensus 238 ~~~~~~~~~ 246 (261)
T PRK14258 238 GLTKKIFNS 246 (261)
T ss_pred CCHHHHHhC
Confidence 999998764
No 489
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=360.96 Aligned_cols=218 Identities=32% Similarity=0.429 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCCC--CH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRRL--QL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~~--~~ 426 (1230)
.+.+++.+++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999963 4599999999999999999999999999999999999987 799999999998643 34
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCCCC--C---HHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKLDA--T---MDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..+++.++|++|++.+|..|++||+.++.... . .+++.++++..++.+ .+....++.+.+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWD-------EVKDKLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCch-------hhhhhhhCCcccCCHHHHHH
Confidence 46788899999999999899999999763211 0 122233333332211 12234466778999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEe--------CCeEEEe
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVD--------NGCLVEI 572 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~--------~G~i~~~ 572 (1230)
++||||++++|+++||||||++||+.+...+.+.+++..+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999988778999999999999865 99999996 8999999
Q ss_pred cChhHHHhh
Q 000909 573 GTHNDLINR 581 (1230)
Q Consensus 573 g~~~~l~~~ 581 (1230)
|+++++.+.
T Consensus 238 g~~~~~~~~ 246 (261)
T PRK14263 238 GPTAQIFQN 246 (261)
T ss_pred CCHHHHHhC
Confidence 999998764
No 490
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=361.05 Aligned_cols=219 Identities=33% Similarity=0.431 Sum_probs=183.0
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCceEEECCeecCC--CC
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDA-----DDGIVRIDGVDIRR--LQ 425 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~i~~--~~ 425 (1230)
.-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999963 3599999999999999999999999999999999999864 69999999999864 33
Q ss_pred HHHHhhheEEEccCccccchhHHHHHhcCCCCCC-----HHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHH
Q 000909 426 LKWVRREMGLVSQEHALFGTSIKDNIMFGKLDAT-----MDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQ 500 (1230)
Q Consensus 426 ~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 500 (1230)
...+++.|+|++|++.+|+.|++||+.++..... .+++.++++.+++.+ ++.......+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWE-------EVKDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccch-------hhHHHhcCCcccCCHHHHH
Confidence 4567889999999999998899999987632111 111222222222211 2233456777899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEe---------CCeEE
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVD---------NGCLV 570 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~---------~G~i~ 570 (1230)
|++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999988778999999999999865 99999998 89999
Q ss_pred EecChhHHHhh
Q 000909 571 EIGTHNDLINR 581 (1230)
Q Consensus 571 ~~g~~~~l~~~ 581 (1230)
+.|+++++...
T Consensus 249 ~~g~~~~~~~~ 259 (274)
T PRK14265 249 EFSPTEQMFGS 259 (274)
T ss_pred EeCCHHHHHhC
Confidence 99999998764
No 491
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-40 Score=324.80 Aligned_cols=213 Identities=28% Similarity=0.516 Sum_probs=182.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCCCeEEECCeecCCCChHHHhhcce
Q 000909 992 IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTA 1071 (1230)
Q Consensus 992 I~f~~Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1071 (1230)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..|+.|++|.|.|||+|+.+ .+...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 688999999974 3348999999999999999999999999999999999999999999999999987 4567899999
Q ss_pred EEcccccCCc-ccHHHHhccCCC--CCCHH----HHHHHHHHhchHHHHHhccccccccccCCCCCCChhHHHHHHHHHH
Q 000909 1072 LVSQEPVIYA-GNIRDNIVFGKL--DASEN----EVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARA 1144 (1230)
Q Consensus 1072 ~VpQdp~Lf~-gTIreNl~~g~~--~~sd~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlalARA 1144 (1230)
+++-+.-|+. -|.||||.|... +.++. ++.+.-+..++.+. +|..+| +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~-------~~rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEY-------LDRRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHH-------HHHHHh----hhchhhHHHHHHHHH
Confidence 9997766765 599999985421 33333 33333344444444 344554 599999999999999
Q ss_pred HccCCCEEEeecccCCcCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhh-hcCEEEEEeCcEEEEecCHhHHhhc
Q 000909 1145 IIRNPTILLLDEATSALDVQSEQVVQEALDRIMM-GRTTIVVAHRLNTIK-KLDSIALVADGRVVERGTYAQLTHM 1218 (1230)
Q Consensus 1145 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~ 1218 (1230)
|+++|+|+|||||||+||..+.+.+++-+.+... |++||.-||-++.++ -||+|+++.+|++|..|+++++.++
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999999998765 999999999999998 7999999999999999999999876
No 492
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-39 Score=350.32 Aligned_cols=206 Identities=28% Similarity=0.469 Sum_probs=171.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++. . .|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5789999999632 2 39999999999999999999999999999999999999999999999976654 357899
Q ss_pred EEccCccccch-hHHHHHhcCCC-CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKL-DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
|++|++.+|.+ |++||+.++.. .....+ .....+.+.++.+ |++........+||||||||++||||++.+|
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~----~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p 147 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTA----EDRQAIEVALARV--GLAGLEKRLPGELSGGERQRVALARVLVRDK 147 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccH----HHHHHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999975 99999987642 111000 0011223334444 5555566677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 513 VILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
+++||||||++||++++..+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 148 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 148 PVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999998864 38999999999999966 9999999999998764
No 493
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-39 Score=355.60 Aligned_cols=215 Identities=33% Similarity=0.478 Sum_probs=183.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++|++++|++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 478999999973 359999999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEccCccccch-hHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKLD--ATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKN 511 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 511 (1230)
|++|++.+|.+ |++||+.++... .+.+... ..+.+.++.+ |++..+.....+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIK-----ERVAEALDLV--QLEGYANRKPSQLSGGQQQRVAIARALVNE 148 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999965 999999865211 1111111 1223344444 666667777789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 512 PVILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 512 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
|+++||||||++||+.+.+.+.+.+++..+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 149 PKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999999999999988653 8999999999999865 999999999999999999888653
No 494
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.1e-39 Score=360.61 Aligned_cols=231 Identities=22% Similarity=0.344 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCC------CCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHH
Q 000909 354 EIEFEHVKFSYPSR------PDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLK 427 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~ 427 (1230)
-|+++||+++|+.. .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999999765555
Q ss_pred HHhhheEEEccCcc--ccch-hHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCccc-chhcCCCCCCChhHHH
Q 000909 428 WVRREMGLVSQEHA--LFGT-SIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYE-TKVGERGALLSGGQKQ 500 (1230)
Q Consensus 428 ~~r~~i~~v~Q~~~--l~~~-ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkq 500 (1230)
..++.++|++|++. +++. |+.+|+.++.. .....+.. ..+.+.++.+ |++ ........+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~q 156 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQRE-----KQIIETLRQV--GLLPDHASYYPHMLAPGQKQ 156 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHH-----HHHHHHHHHc--CCChHHHhcCchhcCHHHHH
Confidence 66678999999985 4443 89999875321 11111111 1223444554 553 2345566789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhH
Q 000909 501 RIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHND 577 (1230)
Q Consensus 501 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 577 (1230)
|++||||++.+|+++||||||++||+.+...+.+.|.++. .|+|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 157 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 236 (267)
T PRK15112 157 RLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTAD 236 (267)
T ss_pred HHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 9999999999999999999999999999999999999864 38899999999999986 99999999999999999999
Q ss_pred HHhhcC-cHHHHHHH
Q 000909 578 LINRID-GHYAKMAK 591 (1230)
Q Consensus 578 l~~~~~-~~~~~~~~ 591 (1230)
+..... ..+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 237 VLASPLHELTKRLIA 251 (267)
T ss_pred HhcCCCCHHHHHHHH
Confidence 876432 33444543
No 495
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.7e-39 Score=360.21 Aligned_cols=215 Identities=22% Similarity=0.280 Sum_probs=177.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC--CCCCceEEECCeecCCCCHHHH-hh
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFY--DADDGIVRIDGVDIRRLQLKWV-RR 431 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~g~~i~~~~~~~~-r~ 431 (1230)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++...+.... +.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 45999999999999999999999999999999999994 7999999999999988776554 45
Q ss_pred heEEEccCccccch-hHHHHHhcCCCC---------CCHHHHHHHHHHHhHHHHHHhCCCcccc-hhcCCCC-CCChhHH
Q 000909 432 EMGLVSQEHALFGT-SIKDNIMFGKLD---------ATMDEVIAAATAANAHNFIRQLPEGYET-KVGERGA-LLSGGQK 499 (1230)
Q Consensus 432 ~i~~v~Q~~~l~~~-ti~~Ni~~~~~~---------~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~-~LSgGqk 499 (1230)
.++|++|++.+|++ |++||+.+.... .+.++. ...+.+.++.+ |++. ....... +||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDF-----LKLLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHH-----HHHHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 69999999999876 999999764210 011111 11233445554 5543 3344444 5999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhc--cCEEEEEeCCeEEEecChh
Q 000909 500 QRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQAS-LGRTTLVVAHKLSTVRN--ADLIAVVDNGCLVEIGTHN 576 (1230)
Q Consensus 500 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~--~d~i~~l~~G~i~~~g~~~ 576 (1230)
||++|||||+.+|+++||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999998864 47999999999999975 7999999999999999987
Q ss_pred HHH
Q 000909 577 DLI 579 (1230)
Q Consensus 577 ~l~ 579 (1230)
++.
T Consensus 231 ~~~ 233 (243)
T TIGR01978 231 LAK 233 (243)
T ss_pred Hhc
Confidence 653
No 496
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=357.52 Aligned_cols=227 Identities=28% Similarity=0.451 Sum_probs=187.1
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECC------eecCCCCH
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDG------VDIRRLQL 426 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g------~~i~~~~~ 426 (1230)
..|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++...+.
T Consensus 9 ~~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~ 85 (257)
T PRK14246 9 DVFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDA 85 (257)
T ss_pred hheeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCH
Confidence 45999999999963 4599999999999999999999999999999999999999997666655 66666677
Q ss_pred HHHhhheEEEccCccccch-hHHHHHhcCCCC--C-CHHHHHHHHHHHhHHHHHHhCCCccc----chhcCCCCCCChhH
Q 000909 427 KWVRREMGLVSQEHALFGT-SIKDNIMFGKLD--A-TMDEVIAAATAANAHNFIRQLPEGYE----TKVGERGALLSGGQ 498 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l~~g~~----t~~~~~g~~LSgGq 498 (1230)
..+|++++|++|++.+|.+ |++||+.++... . ..++..+ .+.+.++.+ |++ ...++.+..|||||
T Consensus 86 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~l~~~~~~~~~~~~~~LS~G~ 158 (257)
T PRK14246 86 IKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKK-----IVEECLRKV--GLWKEVYDRLNSPASQLSGGQ 158 (257)
T ss_pred HHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHH-----HHHHHHHHc--CCCccchhhhcCCcccCCHHH
Confidence 7788999999999999875 999999975321 1 1222211 122233333 332 34567788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-ccCEEEEEeCCeEEEecChhH
Q 000909 499 KQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVR-NADLIAVVDNGCLVEIGTHND 577 (1230)
Q Consensus 499 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~ 577 (1230)
|||++||||++.+|+++||||||++||+.++..+.+.+.++.+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 159 ~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 159 QQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999999998766799999999999995 499999999999999999999
Q ss_pred HHhhcCcHHHHH
Q 000909 578 LINRIDGHYAKM 589 (1230)
Q Consensus 578 l~~~~~~~~~~~ 589 (1230)
+.+.+...|.+.
T Consensus 239 ~~~~~~~~~~~~ 250 (257)
T PRK14246 239 IFTSPKNELTEK 250 (257)
T ss_pred HHhCCCcHHHHH
Confidence 987544445443
No 497
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-39 Score=353.89 Aligned_cols=214 Identities=31% Similarity=0.481 Sum_probs=180.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCCHHHHhhheE
Q 000909 355 IEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMG 434 (1230)
Q Consensus 355 i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~ 434 (1230)
|+++||+++|++ . ..|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 689999999963 2 2499999999999999999999999999999999999999999999998766542 56899
Q ss_pred EEccCccccch-hHHHHHhcCCC-CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKL-DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNP 512 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 512 (1230)
|++|++.+|.+ |++||+.++.. .....+ .....+.+.++.+ |++..+......||||||||++||||++++|
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~----~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p 148 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNA----AQREKLHAIARQM--GIEDLLARLPGQLSGGQRQRVALARCLVREQ 148 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCH----HHHHHHHHHHHHc--CcHHHHhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999975 99999987531 111000 1112233445554 6666667777899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhh
Q 000909 513 VILLLDEATSALDSESETLVQNALDQAS--LGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINR 581 (1230)
Q Consensus 513 ~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 581 (1230)
+++||||||++||+.+.+.+.+.+++.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 ~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 149 PILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999998864 38899999999999865 999999999999999999988763
No 498
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=360.47 Aligned_cols=220 Identities=30% Similarity=0.401 Sum_probs=181.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCceEEECCeecCC--CCH
Q 000909 354 EIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYD--A---DDGIVRIDGVDIRR--LQL 426 (1230)
Q Consensus 354 ~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~i~~--~~~ 426 (1230)
-|+++||+++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999973 459999999999999999999999999999999999975 5 59999999999864 334
Q ss_pred HHHhhheEEEccCccccchhHHHHHhcCCC--CC-CHHHHHHHHHHHhHHHHHHhC--CCcccchhcCCCCCCChhHHHH
Q 000909 427 KWVRREMGLVSQEHALFGTSIKDNIMFGKL--DA-TMDEVIAAATAANAHNFIRQL--PEGYETKVGERGALLSGGQKQR 501 (1230)
Q Consensus 427 ~~~r~~i~~v~Q~~~l~~~ti~~Ni~~~~~--~~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 501 (1230)
..+++.++|++|++.+|+.|+++|+.++.. .. ..+...+. +.+.++.+ .+++.......+.+||||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qr 156 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEA-----VETSLKQAAIWDEVKDHLHESALSLSGGQQQR 156 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHH-----HHHHHHHcCCccchhhHHhcCcccCCHHHHHH
Confidence 567789999999999998999999987521 11 11111111 11112222 1223345667788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHh
Q 000909 502 IAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLIN 580 (1230)
Q Consensus 502 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 580 (1230)
++||||++.+|+++||||||++||+.+++.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14255 157 VCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMFL 236 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987667899999999999865 99999999999999999988876
Q ss_pred h
Q 000909 581 R 581 (1230)
Q Consensus 581 ~ 581 (1230)
.
T Consensus 237 ~ 237 (252)
T PRK14255 237 N 237 (252)
T ss_pred C
Confidence 4
No 499
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.4e-39 Score=375.51 Aligned_cols=213 Identities=30% Similarity=0.436 Sum_probs=181.9
Q ss_pred EEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCCC----HHHHhhheE
Q 000909 359 HVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRLQ----LKWVRREMG 434 (1230)
Q Consensus 359 ~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~----~~~~r~~i~ 434 (1230)
|++++|++ . .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ....+++++
T Consensus 4 ~l~~~~~~---~-~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---F-SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---E-EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999963 2 35 999999999999999999999999999999999999999999999986532 235678899
Q ss_pred EEccCccccch-hHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCChhHHHHHHHHHHhccCCC
Q 000909 435 LVSQEHALFGT-SIKDNIMFGKLDATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPV 513 (1230)
Q Consensus 435 ~v~Q~~~l~~~-ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ 513 (1230)
|++|++.+|+. |++||+.++.......+. ...+.+.++.+ |++...+..+.+||||||||++|||||+.+|+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~ 151 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELL--GIGHLLGRLPGRLSGGEKQRVAIGRALLSSPR 151 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 99999999975 999999987432221111 12234556666 78777888889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhc-cCEEEEEeCCeEEEecChhHHHhhcC
Q 000909 514 ILLLDEATSALDSESETLVQNALDQASL--GRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIGTHNDLINRID 583 (1230)
Q Consensus 514 illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 583 (1230)
+|||||||++||+.+++.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 152 lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 224 (354)
T TIGR02142 152 LLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPD 224 (354)
T ss_pred EEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcC
Confidence 9999999999999999999999988643 7999999999999865 99999999999999999999876533
No 500
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-40 Score=316.82 Aligned_cols=222 Identities=31% Similarity=0.511 Sum_probs=190.1
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCceEEECCeecCCC--------
Q 000909 353 GEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGKSTAIALVQRFYDADDGIVRIDGVDIRRL-------- 424 (1230)
Q Consensus 353 ~~i~~~~v~~~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~i~~~-------- 424 (1230)
..++++|+.++|+.. .+|++||++-++|+.+.|+|.|||||||+++||.=+-.|+.|.|.++|..|+-.
T Consensus 5 ~~l~v~dlHK~~G~~---eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~ 81 (256)
T COG4598 5 NALEVEDLHKRYGEH---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLK 81 (256)
T ss_pred cceehhHHHhhcccc---hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCee
Confidence 368899999999743 499999999999999999999999999999999999999999999999988532
Q ss_pred --C---HHHHhhheEEEccCccccch-hHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCcccchhcCCCCCCC
Q 000909 425 --Q---LKWVRREMGLVSQEHALFGT-SIKDNIMFGKL---DATMDEVIAAATAANAHNFIRQLPEGYETKVGERGALLS 495 (1230)
Q Consensus 425 --~---~~~~r~~i~~v~Q~~~l~~~-ti~~Ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 495 (1230)
+ .+.+|.+.|+|+|+..|++. |+.||+.-+.- ..+..+.. ..+..++.+. |+.......+..||
T Consensus 82 ~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~-----e~Ae~~L~kV--Gi~ek~~~YP~~LS 154 (256)
T COG4598 82 PADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAI-----ERAEKYLAKV--GIAEKADAYPAHLS 154 (256)
T ss_pred eCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHH-----HHHHHHHHHh--CchhhhhcCccccC
Confidence 1 34678899999999999965 99999974421 11222222 2233456666 88888888899999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCCeEEEEecCchhhhc-cCEEEEEeCCeEEEec
Q 000909 496 GGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQA-SLGRTTLVVAHKLSTVRN-ADLIAVVDNGCLVEIG 573 (1230)
Q Consensus 496 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 573 (1230)
|||+||+||||||..+|+++++|||||||||+---++.+.+.++ ..|+|.++|||.+.+.++ +.+++++.+|.|-|+|
T Consensus 155 GGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G 234 (256)
T COG4598 155 GGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEG 234 (256)
T ss_pred chHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccC
Confidence 99999999999999999999999999999999998999999886 469999999999999998 8999999999999999
Q ss_pred ChhHHHhhcCc
Q 000909 574 THNDLINRIDG 584 (1230)
Q Consensus 574 ~~~~l~~~~~~ 584 (1230)
+|+++..++..
T Consensus 235 ~P~qvf~nP~S 245 (256)
T COG4598 235 PPEQVFGNPQS 245 (256)
T ss_pred ChHHHhcCCCC
Confidence 99999886543
Done!