Query 000909
Match_columns 1230
No_of_seqs 347 out of 4413
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 18:08:37 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000909.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_675-679//hhsearch_pdb/000909hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1789.0 130.6 1213 7-1230 59-1317(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1556.2 119.9 1214 8-1230 33-1271(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 867.7 73.6 579 644-1229 56-653 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 790.9 60.9 574 649-1229 34-625 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 747.2 64.8 569 647-1229 22-590 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 746.8 69.2 566 652-1229 13-578 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 742.3 66.0 572 650-1230 2-577 (578)
8 2yl4_A ATP-binding cassette SU 1.0 1 1 725.9 73.7 572 650-1229 7-583 (595)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 724.0 76.1 568 649-1230 12-580 (582)
10 3b60_A Lipid A export ATP-bind 1.0 1 1 723.4 72.8 568 649-1230 12-580 (582)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1789.03 Aligned_cols=1213 Identities=34% Similarity=0.555 Sum_probs=1055.9
Q ss_pred CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----------CCCCCCCHHHHHHHHHH
Q ss_conf 4149999880083559899999999999777888999999999821116766-----------54446621246489999
Q 000909 7 KNNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQT-----------QSQQNHHENFLDEVEKC 75 (1230)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 75 (1230)
+.+++++|+|+.++++++++++++++++.|+..|++.+++|+++|.|..... .........+.+.+..+
T Consensus 59 ~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (1321)
T 4f4c_A 59 KVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNV 138 (1321)
T ss_dssp CCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 77999973156767899999999999999999999999999999999701000145430003443100168999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999819901110169889568999999729999999955698
Q 000909 76 SLYFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVP 155 (1230)
Q Consensus 76 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~f~~~~~~g~g~l~~~~~~D~~~i~~~~~~~~~ 155 (1230)
++++++++++.+++.+++.+++.+.++++..++|.++++|++++|++|||+ +++| ++++|+++|++.+++++...++
T Consensus 139 ~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~-~~~G--~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 139 VWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT-NHSG--TLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH-TCCT--THHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-CCHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999997889899879-9848--9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHH
Q ss_conf 99999999999999999896889999999999999999999999999999999999999999999970199999815189
Q 000909 156 IFVMNASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAER 235 (1230)
Q Consensus 156 ~~~~~~~~~~~~~i~~~~~~~~l~li~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~ 235 (1230)
.++..+.++++++++++.++|++++++++++|+++++..++.++..+..++.++..+++++.+.|.++|+++||+|++|+
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999-999999999999999999823864889999999999999999998999
Q 000909 236 RIIDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPE 314 (1230)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 314 (1230)
.+.++|.+..++..+...+.....++..+.. .+....+++++|+|.+++..+.+++|.+++++.++.....|+..+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCC
Q ss_conf 99999999999999998522988888887786567866418999888988999997540130499838979999848999
Q 000909 315 LKYFTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGS 394 (1230)
Q Consensus 315 ~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGs 394 (1230)
+..+.++..+++|++++++.+|+.+........+.+..|+|+|+||+|+||++++.++|+|+||+++||+++||||||||
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGs 455 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGC 455 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCC
T ss_conf 99999999999999999717853456665565677888767999855407999987433331886228827899805898
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 48999999941787998669989962698888887501078806766660308999863999999989999999973999
Q 000909 395 GKSTAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHN 474 (1230)
Q Consensus 395 GKSTl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~ 474 (1230)
|||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||+|+||+|++||+|||.||+++.+++++++||+.+++++
T Consensus 456 GKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~ 535 (1321)
T 4f4c_A 456 GKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEK 535 (1321)
T ss_dssp CHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHH
T ss_conf 57788887545651644861579965011259998504666587533207861678864155220999999998756546
Q ss_pred HHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Q ss_conf 99838886101002899988936999999999860299889983777899979799999999984299739998229202
Q 000909 475 FIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLST 554 (1230)
Q Consensus 475 ~i~~lp~g~~t~i~~~g~~LSgGqkqri~lARal~~~~~ililDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~ith~~~~ 554 (1230)
|++.||+||+|.+||+|.+|||||||||+||||+|++|+|+|||||||+||+++|+.+++++.+..+++|+|+||||+++
T Consensus 536 ~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls~ 615 (1321)
T 4f4c_A 536 FIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLST 615 (1321)
T ss_dssp HHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTTT
T ss_pred HHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf 88708888860755898877777879999999872599989984554468878999999999998479889997363878
Q ss_pred HHCCCEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCC-----C-CCCCCCC------CCCCCCCCC--CCC
Q ss_conf 3305989999598697825936787302827899999840146797-----7-8876454------665445579--875
Q 000909 555 VRNADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQRQFSCDD-----Q-ETIPETH------VSSVTRSSG--GRL 620 (1230)
Q Consensus 555 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~------~~~~~~~~~--~~~ 620 (1230)
+++||+|++|++|+|+|+|+|+||+++ +|.|+++++.|......+ . ..+.... ......... ...
T Consensus 616 i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1321)
T 4f4c_A 616 IRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIM 694 (1321)
T ss_dssp TTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHHHHHHHHHHHHCC-----------------------------
T ss_pred HHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 986898999639965136899999985-3279999996221222233233443322321112222234222222211022
Q ss_pred CCCCCCCCCCCCCCCCCC----------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 335789754479998779----------------9998888953799997642133699999999999998777789999
Q 000909 621 SAARSSPAIFASPLPVID----------------SPQPVTYLPPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALT 684 (1230)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 684 (1230)
..............+..+ +..........+++++++.++.|..++++.+++.+.+...|.+++.
T Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~ 774 (1321)
T 4f4c_A 695 NRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVF 774 (1321)
T ss_dssp ---------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11101321245677402577753154038999999997078631099999998778999999999999999999999999
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf 99999987204524676659899999999999999999999999999999999999999999997299323222467734
Q 000909 685 IGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSG 764 (1230)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G 764 (1230)
++.+++.+.... ........+|.++|++++++..++.++..+++.+.+.++..++|.+++++++++|++|||..++++|
T Consensus 775 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G 853 (1321)
T 4f4c_A 775 FTSFMNVFAGNP-ADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASG 853 (1321)
T ss_dssp HHHHHHHTSSCS-STTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHH
T ss_pred HHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHH
T ss_conf 999998751793-4556678999999999999999999999999999999999999999988873499333216788848
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999962199999999988999999999999999999999899999999999999999999999996899999999999
Q 000909 765 ALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNR 844 (1230)
Q Consensus 765 ~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (1230)
++++|+++|++.++..++..+..++..++.+++.+++++..+|.+++++++++|+..+..+++.+.......+..+..++
T Consensus 854 ~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1321)
T 4f4c_A 854 KISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFAD 933 (1321)
T ss_dssp HHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88850250599999999999999999865377770221378689999999988899999999999999999999999888
Q ss_pred HHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999998812199998730999999999998899999999999999999999999999999999999999862973888
Q 000909 845 STQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAG 924 (1230)
Q Consensus 845 ~~~~~~e~l~g~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g 924 (1230)
......|++.|+++||+|++|+.+.++|.+..+...+...+..+..+...++...+..+..++.+|+|+.++..+..+.+
T Consensus 934 ~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~ 1013 (1321)
T 4f4c_A 934 SGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQ 1013 (1321)
T ss_dssp HHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSC
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 98899999962798886141488999999999999999999999999999999999999999999875788753765421
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
Q ss_conf 8--99999999999999999999999999999999999998716888889888898988887655557099998899879
Q 000909 925 D--VFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYP 1002 (1230)
Q Consensus 925 ~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~ 1002 (1230)
. ++.++.++.....++..+...+++++....+.+|+.++++.+++.+.. ....+.++..|+|+|+||+|+||
T Consensus 1014 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~------~~~~~~~~~~g~I~f~nVsf~Y~ 1087 (1321)
T 4f4c_A 1014 PMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSL------SLAGEKKKLYGKVIFKNVRFAYP 1087 (1321)
T ss_dssp HHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTT------CCCSBCCCCCCCEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC------CCCCCCCCCCCEEEEEEEEEECC
T ss_conf 478999999998778899999999999999999999899986076657776------67787888888189998798579
Q ss_pred CCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCC
Q ss_conf 98874431110279718939999848999978899998512569987488899406898968886501687025667864
Q 000909 1003 SRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAG 1082 (1230)
Q Consensus 1003 ~~~~~~vL~~isl~I~~Ge~vaIvG~SGsGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qd~~LF~g 1082 (1230)
++++.|||+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|
T Consensus 1088 ~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~g 1167 (1321)
T 4f4c_A 1088 ERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDC 1167 (1321)
T ss_dssp TSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSE
T ss_pred CCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECC
T ss_conf 99988212451699889899999899998199999999568638997899999986549999998545998789973272
Q ss_pred CHHHHHCCCC--CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 4888862399--99999899999998230999981202333211599999992599999999997029987786166678
Q 000909 1083 NIRDNIVFGK--LDASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSA 1160 (1230)
Q Consensus 1083 TIreNi~~~~--~~~s~~~i~~al~~a~l~~~i~~Lp~Gldt~ige~G~~LSgGQrQrlaLARAll~~~~ILiLDEaTS~ 1160 (1230)
||||||++|. ++++|+++++||+.|++++||++||+||||.|||+|.+||||||||||||||++|+|+|||||||||+
T Consensus 1168 TIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSa 1247 (1321)
T 4f4c_A 1168 SIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSA 1247 (1321)
T ss_dssp EHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCS
T ss_pred CHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 39999745499999999999999998298499971767899982388915699999999999999717998999681115
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHCC
Q ss_conf 6889799999999986099859998159146640398999949679880597689510652088864109
Q 000909 1161 LDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQS 1230 (1230)
Q Consensus 1161 LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eL~~~~g~y~~l~~~q~ 1230 (1230)
||++||+.|+++|++.+++||+|+||||++|+++||+|+|||+|+|+|+|+|+||++++|.|++||+.|+
T Consensus 1248 LD~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~g~y~~L~~~Q~ 1317 (1321)
T 4f4c_A 1248 LDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYKLTQKQM 1317 (1321)
T ss_dssp TTSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC-----------
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHH
T ss_conf 7899999999999997399989996068999996999999989899998888999849809999999998
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1556.22 Aligned_cols=1214 Identities=38% Similarity=0.634 Sum_probs=1046.2
Q ss_pred CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCC-------CHHHHHHHHHHHH
Q ss_conf 1499998800835598999999999997778889999999998211167665---44466-------2124648999999
Q 000909 8 NNIGIIFRFADRTDILLMVLGTVGAIGDGMSTNCLLVFASRIMNSLGFGQTQ---SQQNH-------HENFLDEVEKCSL 77 (1230)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~ 77 (1230)
..++++++|..+.++.+++++++++++.++..|+++++++.++|.+...... ..... ...+...+..+.+
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1284)
T 3g5u_A 33 VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAY 112 (1284)
T ss_dssp CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 56999998726579999999999999999999999999999999986134443322222211111002446889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999981990111016988956899999972999999995569899
Q 000909 78 YFVYLGLAVMVVAFLEGYCWSKTSERQVVKIRYKYLEAVLRQEVGFFDSQDATTTSEVINSISKDTSLIQELLSEKVPIF 157 (1230)
Q Consensus 78 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~f~~~~~~g~g~l~~~~~~D~~~i~~~~~~~~~~~ 157 (1230)
++++++++..++.++..+++...+.+...++|.+++++++++|++||++ +++| ++++|+++|++.+++.+...+..+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~-~~~G--~l~sr~~~D~~~i~~~~~~~~~~~ 189 (1284)
T 3g5u_A 113 YYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV-HDVG--ELNTRLTDDVSKINEGIGDKIGMF 189 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS-CCSH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-CCHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999998699899756-8877--899999988999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHH
Q ss_conf 99999999999999989688999999999999999999999999999999999999999999997019999981518999
Q 000909 158 VMNASVFISGLAFSTYFSWRLSLVAFPTLLLLIIPGMIYGKYLIYLSKKAYKEYGKANAIVEQALSSIKTVYSFSAERRI 237 (1230)
Q Consensus 158 ~~~~~~~~~~~i~~~~~~~~l~li~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~ 237 (1230)
+..+.++++.+++++.++|++++++++++|++++...++.++..+..++.++..++.++.+.|.++|+++||+|++|+++
T Consensus 190 ~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~ 269 (1284)
T 3g5u_A 190 FQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKE 269 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHH
T ss_conf 99999999999999999899999999999999999999999999999999999999999999999787999984653999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999-99999999999999999982386488999999999999999999899999
Q 000909 238 IDRYEAILDSTTKLGIKQGTAKGLAVGST-GLSFAIWAFLAWYGSHLVMFKGETGGKIYAAGISFILSGLSLGSALPELK 316 (1230)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 316 (1230)
.++|.+..++..+...+.....++..+.. .+....+++++|+|+.++..+.++.|.+++++.+......++..+.+.+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (1284)
T 3g5u_A 270 LERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIE 349 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999992998899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCH
Q ss_conf 99999999999999852298888888778656786641899988898899999754013049983897999984899948
Q 000909 317 YFTEASIAASRIFDRIDRVPEIDGEDTKGLVLDEVRGEIEFEHVKFSYPSRPDSIVLKDFNLKVKAGKSVALVGASGSGK 396 (1230)
Q Consensus 317 ~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGK 396 (1230)
.+..+..+++|++++++.+++.++.......+++..|.|+++|++|+|+++++.++|+|+||++++||+++|||||||||
T Consensus 350 ~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGK 429 (1284)
T 3g5u_A 350 AFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGK 429 (1284)
T ss_dssp HHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCH
T ss_conf 99999999999999972898677666567777777771899998997699998710125458975998899989999979
Q ss_pred HHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999994178799866998996269888888750107880676666030899986399999998999999997399999
Q 000909 397 STAIALVQRFYDADDGIVRIDGVDIRRLQLKWVRREMGLVSQEHALFGTSIKDNIMFGKLDATMDEVIAAATAANAHNFI 476 (1230)
Q Consensus 397 STl~~ll~~~~~~~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i 476 (1230)
|||+++|.|+|+|++|+|.+||.|+++++.+++|++++||+|+|++|++||+|||.+|.++.++++++++|+.+++++++
T Consensus 430 STl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i 509 (1284)
T 3g5u_A 430 STTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFI 509 (1284)
T ss_dssp HHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
T ss_conf 99999980788999738999999877579999986548986887537766999974579899999999999982969999
Q ss_pred HHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH
Q ss_conf 83888610100289998893699999999986029988998377789997979999999998429973999822920233
Q 000909 477 RQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALDQASLGRTTLVVAHKLSTVR 556 (1230)
Q Consensus 477 ~~lp~g~~t~i~~~g~~LSgGqkqri~lARal~~~~~ililDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~ith~~~~~~ 556 (1230)
..+|+|++|.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.+++.++...+++|+|+||||++++.
T Consensus 510 ~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~ 589 (1284)
T 3g5u_A 510 MKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVR 589 (1284)
T ss_dssp HHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHT
T ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
T ss_conf 74656334501478786599999999999999529998999798777799999999999999739998999940778997
Q ss_pred CCCEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCC
Q ss_conf 0598999959869782593678730282789999984014679778876454665------4455798753357897544
Q 000909 557 NADLIAVVDNGCLVEIGTHNDLINRIDGHYAKMAKLQRQFSCDDQETIPETHVSS------VTRSSGGRLSAARSSPAIF 630 (1230)
Q Consensus 557 ~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 630 (1230)
.||+|++|++|+++|.|+|+++++. ++.|++++..+......+........... ...................
T Consensus 590 ~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (1284)
T 3g5u_A 590 NADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSI 668 (1284)
T ss_dssp TCSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHTC------------------------------------------
T ss_pred CCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 4998999989999997889999867-877999999743002211133333322222344333333332000345433344
Q ss_pred CCC----CC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHH
Q ss_conf 799----98-77999988889537999976421336999999999999987777899999999998720452-4676659
Q 000909 631 ASP----LP-VIDSPQPVTYLPPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSH-SEMQSRI 704 (1230)
Q Consensus 631 ~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 704 (1230)
..+ .. ...+..........+++++++.++.|+.+.++.++..+.+...+..++.++.+++.+..... .......
T Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 748 (1284)
T 3g5u_A 669 CGPHDQDRKLSTKEALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNS 748 (1284)
T ss_dssp ---------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 56422332110245553136625899999984515799999999999999999999999999999985568503367799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999999999999999999999729932322246773479999962199999999988
Q 000909 705 RTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADR 784 (1230)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~ 784 (1230)
..+.+++++++++..++.++..+.+.+.+.++..++|.+++++++++|++||+...+++|++++|+++|++.++..++..
T Consensus 749 ~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~ 828 (1284)
T 3g5u_A 749 NLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSR 828 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999839988875789988999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCH
Q ss_conf 99999999999999999999989999999999999999999999999689999999999999999998812199998730
Q 000909 785 VSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGS 864 (1230)
Q Consensus 785 ~~~~~~~~~~~~~~i~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~ 864 (1230)
+..++..+..++..+++++.++|.+++++++++|+.+++.+...+.......+..+..++......|++.|+++||+|+.
T Consensus 829 l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~ 908 (1284)
T 3g5u_A 829 LAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTR 908 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999969999999999999999999999999999999999999999999999988999998465
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999889999999999999999999999999999999999999986297388889999999999999999999
Q 000909 865 AGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAG 944 (1230)
Q Consensus 865 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~~~~~~ 944 (1230)
|+.+.++|.+..+...+...+.....+...++.+...++..++.+|+|++++..|.++.+.++.++.++.....++..+.
T Consensus 909 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1284)
T 3g5u_A 909 EQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVS 988 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999999098069999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 99999999999999999987168888898888989888876555570999988998799887443111027971893999
Q 000909 945 SMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVG 1024 (1230)
Q Consensus 945 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~va 1024 (1230)
...+++..+..+.+|+.++++.+++.+..+ ....++++..|.|+|+||+|+||++++.++|+|+||+|++||++|
T Consensus 989 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~-----~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ 1063 (1284)
T 3g5u_A 989 SFAPDYAKATVSASHIIRIIEKTPEIDSYS-----TQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLA 1063 (1284)
T ss_dssp SSSCCSTHHHHHHHHHHHHHHSCCSSSSCC-----SSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----CCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEE
T ss_conf 999999999999999999983887666655-----566545677785799998997799998700203059976998899
Q ss_pred EECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHHCCCCC--CCCHHHHHH
Q ss_conf 984899997889999851256998748889940689896888650168702566786448888623999--999989999
Q 000909 1025 LVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKL--DASENEVVE 1102 (1230)
Q Consensus 1025 IvG~SGsGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qd~~LF~gTIreNi~~~~~--~~s~~~i~~ 1102 (1230)
||||||||||||+++|+|+|+|++|+|.+||+|+++++++++|+++++|||||.+|++||+|||.++.+ ..+++++++
T Consensus 1064 ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~ 1143 (1284)
T 3g5u_A 1064 LVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVR 1143 (1284)
T ss_dssp EECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHH
T ss_pred EECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHH
T ss_conf 98899997899999994686789977989999800078999970268987787406666999974668778999999999
Q ss_pred HHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99982309999812023332115999999925999999999970299877861666786889799999999986099859
Q 000909 1103 AARAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTT 1182 (1230)
Q Consensus 1103 al~~a~l~~~i~~Lp~Gldt~ige~G~~LSgGQrQrlaLARAll~~~~ILiLDEaTS~LD~~te~~i~~~l~~~~~~~Tv 1182 (1230)
+++.++++++++++|+||||.+||+|.+||||||||+|||||++++|+|||||||||+||+++++.|++.|++..+|+|+
T Consensus 1144 ~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tv 1223 (1284)
T 3g5u_A 1144 AAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTC 1223 (1284)
T ss_dssp HHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCE
T ss_pred HHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 99983959999727042456117888933899999999999997499999986875557999999999999986799989
Q ss_pred EEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHCC
Q ss_conf 998159146640398999949679880597689510652088864109
Q 000909 1183 IVVAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQS 1230 (1230)
Q Consensus 1183 I~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eL~~~~g~y~~l~~~q~ 1230 (1230)
|+||||++++..||||+||++|+|+|.|+|+||++++|.|++||+.|.
T Consensus 1224 i~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~~g~y~~l~~~q~ 1271 (1284)
T 3g5u_A 1224 IVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQA 1271 (1284)
T ss_dssp EEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHSCSHHHHHHHHHC
T ss_pred EEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHH
T ss_conf 999558799980998999989989997789999847777999999976
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=867.69 Aligned_cols=579 Identities=36% Similarity=0.596 Sum_probs=527.6
Q ss_pred CCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------------CHHHHHHHH
Q ss_conf 8895379999764213-369999999999999877778999999999987204------------------524676659
Q 000909 644 TYLPPSFFRLLSLNAP-EWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAK------------------SHSEMQSRI 704 (1230)
Q Consensus 644 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~ 704 (1230)
...+.++++++.|..+ .+..++++.+++.+.|+..|...+.++.+++.+... ........+
T Consensus 56 ~~~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (1321)
T 4f4c_A 56 VVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDV 135 (1321)
T ss_dssp CSSCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHH
T ss_pred CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 56877999973156767899999999999999999999999999999999701000145430003443100168999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999999999999999999999729932322246773479999962199999999988
Q 000909 705 RTYSLIFCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADR 784 (1230)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~ 784 (1230)
..+.+.+++++++..++.++..+++.+++++...++|.++|+|++++|++||| ++++|++++|+++|++.++..+...
T Consensus 136 ~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd--~~~~G~l~sr~~~D~~~i~~~~~~~ 213 (1321)
T 4f4c_A 136 MNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFD--TNHSGTLATKLFDNLERVKEGTGDK 213 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHH--HTCCTTHHHHHHHHHHHHHHTSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999788989987--9984899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCH
Q ss_conf 99999999999999999999989999999999999999999999999689999999999999999998812199998730
Q 000909 785 VSLLVQTTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGS 864 (1230)
Q Consensus 785 ~~~~~~~~~~~~~~i~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~ 864 (1230)
+..++..+..+++++++++..+|.+++++++.+|+..++.....+...+...+.++..++..+.+.|.+.|+++||+|++
T Consensus 214 l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 293 (1321)
T 4f4c_A 214 IGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNG 293 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999989999999999999999999999999999999999999999999999983999998214
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999889999999999999999999999999999999999999986297388889999999999999999999
Q 000909 865 AGKVLQIFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAG 944 (1230)
Q Consensus 865 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~~~~~~ 944 (1230)
|+.+.++|.+..++..+...+.....+...+....+..+..++++|+|++++..|.+++|.+++++.++.....++..+.
T Consensus 294 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~ 373 (1321)
T 4f4c_A 294 LRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAG 373 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999999999999999999999999999999999999999999999599869999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 99999999999999999987168888898888989888876555570999988998799887443111027971893999
Q 000909 945 SMTSDLAKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVG 1024 (1230)
Q Consensus 945 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~va 1024 (1230)
..+..+..+..+.+|++++++.+++.+.. ......+.+..|+|+|+||+|+||++++.|+|+|+||+|+|||++|
T Consensus 374 ~~~~~~~~~~~s~~ri~~~l~~~~~~~~~-----~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~va 448 (1321)
T 4f4c_A 374 PQLAVLGTAQGAASGIYEVLDRKPVIDSS-----SKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVA 448 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCSSCS-----SSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCC-----CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEE
T ss_conf 99999999999999999997178534566-----6556567788876799985540799998743333188622882789
Q ss_pred EECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 98489999788999985125699874888994068989688865016870256678644888862399999998999999
Q 000909 1025 LVGKSGCGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAA 1104 (1230)
Q Consensus 1025 IvG~SGsGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qd~~LF~gTIreNi~~~~~~~s~~~i~~al 1104 (1230)
||||||||||||+++|+|+|+|++|+|.+||+|++++++++||++|+||||||+||+|||||||.+|+++++++++++||
T Consensus 449 ivG~sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~ 528 (1321)
T 4f4c_A 449 LVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAAC 528 (1321)
T ss_dssp EEECSSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 98058985778888754565164486157996501125999850466658753320786167886415522099999999
Q ss_pred HHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 98230999981202333211599999992599999999997029987786166678688979999999998609985999
Q 000909 1105 RAANAHEFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIV 1184 (1230)
Q Consensus 1105 ~~a~l~~~i~~Lp~Gldt~ige~G~~LSgGQrQrlaLARAll~~~~ILiLDEaTS~LD~~te~~i~~~l~~~~~~~TvI~ 1184 (1230)
+.+++++||+.||+||||.|||+|.+||||||||||||||++++|+|+|||||||+||++||+.++++|.++.+++|+|+
T Consensus 529 ~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~ii 608 (1321)
T 4f4c_A 529 KMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTII 608 (1321)
T ss_dssp HHTTCHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEE
T ss_pred HHCCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 87565468870888886075589887777787999999987259998998455446887899999999999847988999
Q ss_pred ECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHC
Q ss_conf 815914664039899994967988059768951065208886410
Q 000909 1185 VAHRLNTIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1185 IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eL~~~~g~y~~l~~~q 1229 (1230)
||||+++++.||+|+||++|+|+|+|+|+||++++|.|++|++.|
T Consensus 609 iaHrls~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q 653 (1321)
T 4f4c_A 609 IAHRLSTIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQ 653 (1321)
T ss_dssp ECSCTTTTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHH
T ss_pred ECCCHHHHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 736387898689899963996513689999998532799999962
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=790.91 Aligned_cols=574 Identities=37% Similarity=0.612 Sum_probs=516.3
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHH
Q ss_conf 7999976421-336999999999999987777899999999998720452-----------------4676659899999
Q 000909 649 SFFRLLSLNA-PEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSH-----------------SEMQSRIRTYSLI 710 (1230)
Q Consensus 649 ~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 710 (1230)
.+++++.+.. ..|..+.++.+++.+.++..|..++.++.+++.+..... .........+.+.
T Consensus 34 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1284)
T 3g5u_A 34 SVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYY 113 (1284)
T ss_dssp TTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 69999987265799999999999999999999999999999999861344433222222111110024468899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999729932322246773479999962199999999988999999
Q 000909 711 FCSLSLISLAFNLLQHYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQ 790 (1230)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~ 790 (1230)
+++++++..++.++..+++.+.+.+...++|.++|++++++|++||| ++++|++++|+++|++.++..++..+..++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~--~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~ 191 (1284)
T 3g5u_A 114 YTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFD--VHDVGELNTRLTDDVSKINEGIGDKIGMFFQ 191 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHH--SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999869989975--6887789999998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHH
Q ss_conf 99999999999999989999999999999999999999999689999999999999999998812199998730999999
Q 000909 791 TTSAVAIAMIMGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQ 870 (1230)
Q Consensus 791 ~~~~~~~~i~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~e~~~~~ 870 (1230)
.+..+++.+++++..+|.+++++++.+|+..+...+..+...+...+..+..++..+.+.|++.|+++||+|++|+.+.+
T Consensus 192 ~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~ 271 (1284)
T 3g5u_A 192 AMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELE 271 (1284)
T ss_dssp HHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHH
T ss_conf 99999999999999989999999999999999999999999999999999999999999999978799998465399999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999889999999999999999999999999999999999999986297388889999999999999999999999999
Q 000909 871 IFDEAQEEPRKQARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDL 950 (1230)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 950 (1230)
+|++..++..+...+.....+...++...+..+..++++|+|+.++..|.+++|.+++++.+......++..+...+..+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1284)
T 3g5u_A 272 RYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAF 351 (1284)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999299889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCC
Q ss_conf 99999999999987168888898888989888876555570999988998799887443111027971893999984899
Q 000909 951 AKGSTAVASVFKILDRQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSG 1030 (1230)
Q Consensus 951 ~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SG 1030 (1230)
..+..+++|++++++.+++.+... ..+..+++..|.|+|+||+|+||++++.++|+|+||+|+|||++|||||||
T Consensus 352 ~~~~~a~~ri~~~l~~~~~~~~~~-----~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sG 426 (1284)
T 3g5u_A 352 ANARGAAYEVFKIIDNKPSIDSFS-----KSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSG 426 (1284)
T ss_dssp HHHHHHHHHHHHTTSCCCCCSSCC-----SSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCC-----CCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCC
T ss_conf 999999999999972898677666-----567777777771899998997699998710125458975998899989999
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHH
Q ss_conf 99788999985125699874888994068989688865016870256678644888862399999998999999982309
Q 000909 1031 CGKSTVIGLIQRFYDVEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAH 1110 (1230)
Q Consensus 1031 sGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qd~~LF~gTIreNi~~~~~~~s~~~i~~al~~a~l~ 1110 (1230)
||||||+++|+|+|+|++|+|.+||+|+++++++++|+++++|||||.+|++||+|||.+|.++.++++++++++.++++
T Consensus 427 sGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~ 506 (1284)
T 3g5u_A 427 CGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAY 506 (1284)
T ss_dssp SSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCH
T ss_conf 97999999980788999738999999877579999986548986887537766999974579899999999999982969
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 99981202333211599999992599999999997029987786166678688979999999998609985999815914
Q 000909 1111 EFISSLKDGYETECGERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLN 1190 (1230)
Q Consensus 1111 ~~i~~Lp~Gldt~ige~G~~LSgGQrQrlaLARAll~~~~ILiLDEaTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ 1190 (1230)
++++++|+|+||.+||+|.+||||||||+|||||++++|+|||||||||+||+++|+.+++.++...+++|+|+||||++
T Consensus 507 ~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~ 586 (1284)
T 3g5u_A 507 DFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLS 586 (1284)
T ss_dssp HHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 99974656334501478786599999999999999529998999798777799999999999999739998999940778
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHC
Q ss_conf 664039899994967988059768951065208886410
Q 000909 1191 TIKKLDSIALVADGRVVERGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1191 ti~~~D~I~vl~~G~Ive~Gt~~eL~~~~g~y~~l~~~q 1229 (1230)
++..||+|+||++|+|+|.|+|+||++.+|.|++++..|
T Consensus 587 ~i~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 625 (1284)
T 3g5u_A 587 TVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQ 625 (1284)
T ss_dssp HHTTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHT
T ss_pred HHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHH
T ss_conf 997499899998999999788999986787799999974
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=747.21 Aligned_cols=569 Identities=28% Similarity=0.437 Sum_probs=513.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 53799997642133699999999999998777789999999999872045246766598999999999999999999999
Q 000909 647 PPSFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQH 726 (1230)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 726 (1230)
...+++++++.++.++.+..+.++..+.+...+..++.++.+++....... ......+..+++++.++..++.++..
T Consensus 22 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (598)
T 3qf4_B 22 TATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR---FDLLPRYMLILGTIYALTSLLFWLQG 98 (598)
T ss_dssp HHHHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---GGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999999999999999999999999999999973688---89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999997299323222467734799999621999999999889999999999999999999998
Q 000909 727 YNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVA 806 (1230)
Q Consensus 727 ~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 806 (1230)
+...+.+.+...++|.+++++++++|+.||+ ++++|++++|+++|++.++..+...+..++..+..+++++++++.++
T Consensus 99 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 176 (598)
T 3qf4_B 99 KIMLTLSQDVVFRLRKELFEKLQRVPVGFFD--RTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVN 176 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTHHHH--HSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999779999976--88889999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999996899999999999999999988121999987309999999999988999999999
Q 000909 807 WKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKK 886 (1230)
Q Consensus 807 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~ 886 (1230)
|.++++++++.|+..+......+...+...+..+..++..+.+.|.+.|+++||+|++|+.+.++|++..++..+...+.
T Consensus 177 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 256 (598)
T 3qf4_B 177 VILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKA 256 (598)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999997379999974870999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999999999862973888899999999999999999999999999999999999998716
Q 000909 887 SWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDR 966 (1230)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 966 (1230)
.+......+....+..+..++++++|++++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 336 (598)
T 3qf4_B 257 QIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDL 336 (598)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985997899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCC
Q ss_conf 88888988889898888765555709999889987998874431110279718939999848999978899998512569
Q 000909 967 QSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDV 1046 (1230)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGsGKSTL~~lL~rl~~~ 1046 (1230)
+++.+.. ...+.++..|+|+++||+|+|++ +.++|+|+||++++||++|||||||||||||+++|.|+|+|
T Consensus 337 ~~~~~~~-------~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p 407 (598)
T 3qf4_B 337 EEEKDDP-------DAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDV 407 (598)
T ss_dssp CCCCCCS-------SCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCC
T ss_pred CCCCCCC-------CCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 8777777-------77777777771899998997799--98601222799869988999899999699999999458579
Q ss_pred CCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCC
Q ss_conf 98748889940689896888650168702566786448888623999999989999999823099998120233321159
Q 000909 1047 EQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGE 1126 (1230)
Q Consensus 1047 ~~G~I~idG~di~~~~~~~lR~~i~~V~Qd~~LF~gTIreNi~~~~~~~s~~~i~~al~~a~l~~~i~~Lp~Gldt~ige 1126 (1230)
++|+|.+||+|+++++.+++|+++++|||||.+|++|++|||.+++++.++++++++++.++++++++++|+|+||.+++
T Consensus 408 ~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~ 487 (598)
T 3qf4_B 408 DRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTD 487 (598)
T ss_dssp SEEEEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHH
T ss_pred CCEEEEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCC
T ss_conf 98089999998301889999841089907982324639999744799999999999999969788897464532364227
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEE
Q ss_conf 99999925999999999970299877861666786889799999999986099859998159146640398999949679
Q 000909 1127 RGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRV 1206 (1230)
Q Consensus 1127 ~G~~LSgGQrQrlaLARAll~~~~ILiLDEaTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~I 1206 (1230)
+|.+||||||||+|||||++++|++||||||||+||+++++.+++.+.+..+++|+|+||||+++++.||+|++|++|++
T Consensus 488 ~g~~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i 567 (598)
T 3qf4_B 488 NGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEI 567 (598)
T ss_dssp HHTTSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSE
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEE
T ss_conf 88987999999999999996499999998976679999999999999998089989999427789971998999989999
Q ss_pred EEECCHHHHHHCCCCCHHHHHHC
Q ss_conf 88059768951065208886410
Q 000909 1207 VERGTYAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1207 ve~Gt~~eL~~~~g~y~~l~~~q 1229 (1230)
+|.|+|+||++++|.|++++..|
T Consensus 568 ~~~g~~~~l~~~~~~~~~~~~~~ 590 (598)
T 3qf4_B 568 VEMGKHDELIQKRGFYYELFTSQ 590 (598)
T ss_dssp EECSCHHHHHHTTCHHHHHHHHH
T ss_pred EEECCHHHHHHCCCHHHHHHHHH
T ss_conf 98778999986787799999997
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=746.79 Aligned_cols=566 Identities=25% Similarity=0.413 Sum_probs=502.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99764213369999999999999877778999999999987204524676659899999999999999999999999999
Q 000909 652 RLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNFAY 731 (1230)
Q Consensus 652 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (1230)
.++++.++.++.+.++.++..+.+.+....++.++.+++....... ......+...++++.++..++.++..+...+
T Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (587)
T 3qf4_A 13 TLARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD---FSLVLKTGILMLIVALIGAVGGIGCTVFASY 89 (587)
T ss_dssp CGGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999873698---7999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999729932322246773479999962199999999988999999999999999999999899999
Q 000909 732 MGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKLAV 811 (1230)
Q Consensus 732 ~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~l 811 (1230)
.+.+...++|.+++++++++|+.||+ ++++|++++|+++|++.++..+...+..++.....+++++++++.++|.+++
T Consensus 90 ~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 167 (587)
T 3qf4_A 90 ASQNFGADLRRDLFRKVLSFSISNVN--RFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSS 167 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHH--HSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999788979976--5888999999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999689999999999999999998812199998730999999999998899999999999999
Q 000909 812 VMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWLAG 891 (1230)
Q Consensus 812 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (1230)
++++.+|+..+...+..+...+..++..+..++..+.+.|.+.|+++||+|++|+.+.++|++..++..+...+..+...
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
T 3qf4_A 168 VLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIV 247 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999855999998621499999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999999986297388889999999999999999999999999999999999999871688888
Q 000909 892 IGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSLIP 971 (1230)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 971 (1230)
...++...+..+..++++|+|++++..|.+++|.++++..+......++..+...+..+.++..+.+|+.++++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 327 (587)
T 3qf4_A 248 FALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIE 327 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998499389999999999999999999999999999999999999999976897657
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 98888989888876555570999988998799887443111027971893999984899997889999851256998748
Q 000909 972 GSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQGSV 1051 (1230)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGsGKSTL~~lL~rl~~~~~G~I 1051 (1230)
+. ....+.++..+.|+++||+|+|++. +.++|+|+||++++||++|||||||||||||+++|.|+|+|++|+|
T Consensus 328 ~~------~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i 400 (587)
T 3qf4_A 328 EA------DNALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRV 400 (587)
T ss_dssp CC------TTCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEE
T ss_pred CC------CCCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
T ss_conf 88------7765668888807997889984899-9764211179986998899989999979999999927866998679
Q ss_pred EECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 88994068989688865016870256678644888862399999998999999982309999812023332115999999
Q 000909 1052 RVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECGERGVQL 1131 (1230)
Q Consensus 1052 ~idG~di~~~~~~~lR~~i~~V~Qd~~LF~gTIreNi~~~~~~~s~~~i~~al~~a~l~~~i~~Lp~Gldt~ige~G~~L 1131 (1230)
.+||+|+++++.+++|++++||||||.+|++|++|||.++.++.++++++++++.++++++++.+|+|+||.++++|.+|
T Consensus 401 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~L 480 (587)
T 3qf4_A 401 EVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNF 480 (587)
T ss_dssp EESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSS
T ss_pred EECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCC
T ss_conf 89999834078999984138977898676755999985248899999999999996849999756531212751898992
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 92599999999997029987786166678688979999999998609985999815914664039899994967988059
Q 000909 1132 SGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVVERGT 1211 (1230)
Q Consensus 1132 SgGQrQrlaLARAll~~~~ILiLDEaTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt 1211 (1230)
|||||||+|||||++++|+|+|||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+
T Consensus 481 SgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~ 560 (587)
T 3qf4_A 481 SGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGT 560 (587)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999729999999797544799999999999998679998999822768898199899998998999788
Q ss_pred HHHHHHCCCCCHHHHHHC
Q ss_conf 768951065208886410
Q 000909 1212 YAQLTHMRGAFFNLATLQ 1229 (1230)
Q Consensus 1212 ~~eL~~~~g~y~~l~~~q 1229 (1230)
|+||+++++.|++++..|
T Consensus 561 ~~el~~~~~~~~~~~~~~ 578 (587)
T 3qf4_A 561 HKELLEHCKPYREIYESQ 578 (587)
T ss_dssp HHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHH
T ss_conf 999986783999999998
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=742.30 Aligned_cols=572 Identities=28% Similarity=0.439 Sum_probs=484.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999764213369999999999999877778999999999987204524676659----899999999999999999999
Q 000909 650 FFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRI----RTYSLIFCSLSLISLAFNLLQ 725 (1230)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 725 (1230)
+++++++.++.++.+..+.++..+.+...+..++.++.+++.............. ..+...++++.++..++.++.
T Consensus 2 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (578)
T 4a82_A 2 IKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (578)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999998899999999999999999999999999999999998168711467788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999729932322246773479999962199999999988999999999999999999999
Q 000909 726 HYNFAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVV 805 (1230)
Q Consensus 726 ~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 805 (1230)
.+...+.+.+...++|.+++++++++|++||+ ++++|++++|+++|++.++..+...+..++.....+++++++++.+
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~ 159 (578)
T 4a82_A 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYA--NNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFL 159 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH--TSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999878999976--8986999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999689999999999999999998812199998730999999999998899999999
Q 000909 806 AWKLAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARK 885 (1230)
Q Consensus 806 ~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~ 885 (1230)
+|.++++.++..|+..+......+...+..++..+..++..+.+.|.+.|+++||+|++|+.+.++|++..++..+...+
T Consensus 160 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 239 (578)
T 4a82_A 160 DVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALK 239 (578)
T ss_dssp CTTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 69999999999999999999999999999999999999999999999824999998166499999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999999999999999986297388889999999999999999999999999999999999999871
Q 000909 886 KSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILD 965 (1230)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~ 965 (1230)
..+......++...+..+..++++++|++++..|.+++|.++++..+......++..+...+..+.++..+.+|+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~ 319 (578)
T 4a82_A 240 HTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLID 319 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999998599589999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCC
Q ss_conf 68888898888989888876555570999988998799887443111027971893999984899997889999851256
Q 000909 966 RQSLIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYD 1045 (1230)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGsGKSTL~~lL~rl~~ 1045 (1230)
.+++.++. ....+.++..+.|+++||+|+|++. +.++|+|+||++++||++|||||||||||||+++|.|+|+
T Consensus 320 ~~~~~~~~------~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~ 392 (578)
T 4a82_A 320 EDYDIKNG------VGAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYD 392 (578)
T ss_dssp CCCSSCCC------TTCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSC
T ss_pred CCCCCCCC------CCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 89766678------7766667778807999999975899-9741343379987999999989999859999999846788
Q ss_pred CCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCC
Q ss_conf 99874888994068989688865016870256678644888862399999998999999982309999812023332115
Q 000909 1046 VEQGSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLDASENEVVEAARAANAHEFISSLKDGYETECG 1125 (1230)
Q Consensus 1046 ~~~G~I~idG~di~~~~~~~lR~~i~~V~Qd~~LF~gTIreNi~~~~~~~s~~~i~~al~~a~l~~~i~~Lp~Gldt~ig 1125 (1230)
|++|+|.+||+|+++++.+++|+++++|||+|.+|++|++||+.++.++.++++++++++.++++++++++|+|+||.+|
T Consensus 393 p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~ 472 (578)
T 4a82_A 393 VTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVG 472 (578)
T ss_dssp CSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCC
T ss_pred CCCCEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHC
T ss_conf 99967999999844278999960068992898347645999985279998899999999880959999757330102530
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCE
Q ss_conf 99999992599999999997029987786166678688979999999998609985999815914664039899994967
Q 000909 1126 ERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGR 1205 (1230)
Q Consensus 1126 e~G~~LSgGQrQrlaLARAll~~~~ILiLDEaTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~ 1205 (1230)
++|.+||||||||++||||++++|++++||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|++|++|+
T Consensus 473 ~~g~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~ 552 (578)
T 4a82_A 473 ERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGH 552 (578)
T ss_dssp GGGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTE
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCE
T ss_conf 68896799999999999999749999999786545799999999999999808997999831789997199899998998
Q ss_pred EEEECCHHHHHHCCCCCHHHHHHCC
Q ss_conf 9880597689510652088864109
Q 000909 1206 VVERGTYAQLTHMRGAFFNLATLQS 1230 (1230)
Q Consensus 1206 Ive~Gt~~eL~~~~g~y~~l~~~q~ 1230 (1230)
++|.|+|+||++++|.|+++++.|.
T Consensus 553 i~~~g~~~el~~~~~~~~~~~~~q~ 577 (578)
T 4a82_A 553 IVETGTHRELIAKQGAYEHLYSIQN 577 (578)
T ss_dssp EEEEECHHHHHHTTSHHHHHHTTTT
T ss_pred EEEECCHHHHHHCCCHHHHHHHHHC
T ss_conf 9998889999858838999998506
No 8
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=725.90 Aligned_cols=572 Identities=31% Similarity=0.487 Sum_probs=482.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99997642133699999999999998777789999999999872045246766598999999999999999999999999
Q 000909 650 FFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYNF 729 (1230)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1230)
+++++.+.++.++.+..+.++..+.+...+..++.++.+++................+...++++.++..++.++..+..
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 7 ARKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998878999999999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999997299323222467734799999621999999999889999999999999999999998999
Q 000909 730 AYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWKL 809 (1230)
Q Consensus 730 ~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 809 (1230)
.+.+.+...++|.+++++++++|++||+ ++++|++++|+++|++.++..+...+..++..+..+++.+++++.++|.+
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 164 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFD--KTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNL 164 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHH--HSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999819999977--79848899999999999999999999999999999999999999981999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999996899999999999999999988121999987309999999999988999999999999
Q 000909 810 AVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSWL 889 (1230)
Q Consensus 810 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1230)
++++++..|+..+......+...+..++..+..++..+.+.|.+.|+++||+|+.|+.+.++|++..++..+...+..+.
T Consensus 165 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 244 (595)
T 2yl4_A 165 ATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFA 244 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998119999983756999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999999999999999999862973888899999999999999999999999999999999999998716888
Q 000909 890 AGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQSL 969 (1230)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 969 (1230)
.....+....+..+..++++|+|++++..|.+++|.++++..+......++..+...+..+.++..+.+|+.++++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 324 (595)
T 2yl4_A 245 RAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPK 324 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999986997899999999999999999999999999999999999999999838976
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 8898888989888876555570-999988998799887443111027971893999984899997889999851256998
Q 000909 970 IPGSSQAGDGTRGSKLQKISGK-IEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ 1048 (1230)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~g~-I~f~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGsGKSTL~~lL~rl~~~~~ 1048 (1230)
.+.. .. ..+.++..++ |+++||+|+|+++++.++|+|+||++++||++||+||||||||||+++|.|+++|++
T Consensus 325 ~~~~-----~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~ 398 (595)
T 2yl4_A 325 LPFN-----EG-VILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPAS 398 (595)
T ss_dssp SCSS-----CS-BCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSE
T ss_pred CCCC-----CC-CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 6777-----78-77776789983899988998589988812011279984998899989999979999999825857898
Q ss_pred CEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHHCCCCCC---CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCC
Q ss_conf 7488899406898968886501687025667864488886239999---9998999999982309999812023332115
Q 000909 1049 GSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGKLD---ASENEVVEAARAANAHEFISSLKDGYETECG 1125 (1230)
Q Consensus 1049 G~I~idG~di~~~~~~~lR~~i~~V~Qd~~LF~gTIreNi~~~~~~---~s~~~i~~al~~a~l~~~i~~Lp~Gldt~ig 1125 (1230)
|+|.+||+|+++++.+++|+++++|||+|.+|++|++|||.++.+. .++++++++++.++++++++++|+|+||.+|
T Consensus 399 G~i~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~ 478 (595)
T 2yl4_A 399 GTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVG 478 (595)
T ss_dssp EEEEETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCS
T ss_pred CEEEECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCC
T ss_conf 37999999811179999973228983688326877999984058776656899999999986979999747320135016
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCE
Q ss_conf 99999992599999999997029987786166678688979999999998609985999815914664039899994967
Q 000909 1126 ERGVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGR 1205 (1230)
Q Consensus 1126 e~G~~LSgGQrQrlaLARAll~~~~ILiLDEaTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~ 1205 (1230)
++|.+||||||||++||||++++|+++|||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|++|++|+
T Consensus 479 ~~~~~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~ 558 (595)
T 2yl4_A 479 EKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGK 558 (595)
T ss_dssp SSSCCCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTE
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCE
T ss_conf 88786899999999999999759999999886668998999999999999965997999946878997599899998998
Q ss_pred EEEECCHHHHHHC-CCCCHHHHHHC
Q ss_conf 9880597689510-65208886410
Q 000909 1206 VVERGTYAQLTHM-RGAFFNLATLQ 1229 (1230)
Q Consensus 1206 Ive~Gt~~eL~~~-~g~y~~l~~~q 1229 (1230)
++|.|+|+||++. ++.|+++++.|
T Consensus 559 i~~~g~~~~l~~~~~~~~~~~~~~q 583 (595)
T 2yl4_A 559 ITEYGKHEELLSKPNGIYRKLMNKQ 583 (595)
T ss_dssp EEEEECSCC------C---------
T ss_pred EEEECCHHHHHHCCCHHHHHHHHHH
T ss_conf 9997889999747872999999974
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=724.05 Aligned_cols=568 Identities=28% Similarity=0.471 Sum_probs=501.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999764213369999999999999877778999999999987204524676659899999999999999999999999
Q 000909 649 SFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYN 728 (1230)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1230)
.+++++++.++.++.+....++..+.+...+..++.++.+++...... . ..........++++.++..++.++..+.
T Consensus 12 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (582)
T 3b5x_A 12 TFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNA--E-SNFLRILPFMILGLMFVRGLSGFASSYC 88 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--C-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998899999999999999999999999999999999986468--6-6799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999729932322246773479999962199999999988999999999999999999999899
Q 000909 729 FAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWK 808 (1230)
Q Consensus 729 ~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 808 (1230)
..+.+.+...++|.+++++++++|+.||+ ++++|++++|+++|++.++..+...+..++..+..+++.+++++.++|.
T Consensus 89 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 166 (582)
T 3b5x_A 89 LSWVSGNVVMQMRRRLFNHFMHMPVRFFD--QESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQ 166 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999869999977--8987899999998899999999999999999999999999999998299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999689999999999999999998812199998730999999999998899999999999
Q 000909 809 LAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSW 888 (1230)
Q Consensus 809 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 888 (1230)
+++++++.+|+..+......+...+..++..+..++..+.+.|.+.|+++||+|+.|+.+.++|++..++..+...+..+
T Consensus 167 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3b5x_A 167 LSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVS 246 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999951999997087599999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999999999999986297388889999999999999999999999999999999999999871688
Q 000909 889 LAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQS 968 (1230)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 968 (1230)
......+....+..+..++++|+|++++..|.+++|.++++..+......++..+...+..+.++..+.+|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b5x_A 247 AQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLET 326 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998599889999999999999999999999999999999999999999975897
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 88898888989888876555570999988998799887443111027971893999984899997889999851256998
Q 000909 969 LIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ 1048 (1230)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGsGKSTL~~lL~rl~~~~~ 1048 (1230)
+.+. .. .+.++..+.|+++||+|+|++. +.++|+|+||++++||++||+||||||||||+++|.|+|+|++
T Consensus 327 ~~~~------~~--~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~ 397 (582)
T 3b5x_A 327 ERDN------GK--YEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDS 397 (582)
T ss_pred CCCC------CC--CCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 6777------77--7777788828999989972899-8654004169987999899989999979999999965778999
Q ss_pred CEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHHCCCC-CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCC
Q ss_conf 74888994068989688865016870256678644888862399-99999899999998230999981202333211599
Q 000909 1049 GSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGK-LDASENEVVEAARAANAHEFISSLKDGYETECGER 1127 (1230)
Q Consensus 1049 G~I~idG~di~~~~~~~lR~~i~~V~Qd~~LF~gTIreNi~~~~-~~~s~~~i~~al~~a~l~~~i~~Lp~Gldt~ige~ 1127 (1230)
|+|.+||.|+++++.+++|+++++|||+|.+|++|++|||.++. ++.++++++++++.++++++++++|+||||.++++
T Consensus 398 G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~ 477 (582)
T 3b5x_A 398 GSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGEN 477 (582)
T ss_pred CEEEECCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCC
T ss_conf 87989999856388999964858982799053102999985668899999999999998798999984765334510688
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEE
Q ss_conf 99999259999999999702998778616667868897999999999860998599981591466403989999496798
Q 000909 1128 GVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVV 1207 (1230)
Q Consensus 1128 G~~LSgGQrQrlaLARAll~~~~ILiLDEaTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Iv 1207 (1230)
|.+||||||||++||||++++|++++||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|++|++|+++
T Consensus 478 ~~~LSgGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 557 (582)
T 3b5x_A 478 GTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEII 557 (582)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEE
T ss_conf 88479999999999999974999999978544689999999999999972899899993688999819989999899899
Q ss_pred EECCHHHHHHCCCCCHHHHHHCC
Q ss_conf 80597689510652088864109
Q 000909 1208 ERGTYAQLTHMRGAFFNLATLQS 1230 (1230)
Q Consensus 1208 e~Gt~~eL~~~~g~y~~l~~~q~ 1230 (1230)
+.|+|+||++.++.|+++++.|.
T Consensus 558 ~~g~~~~l~~~~~~~~~~~~~q~ 580 (582)
T 3b5x_A 558 ERGRHADLLAQDGAYAQLHRIQF 580 (582)
T ss_pred EECCHHHHHHCCCHHHHHHHHHH
T ss_conf 97789999848858999999861
No 10
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=723.41 Aligned_cols=568 Identities=30% Similarity=0.494 Sum_probs=500.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999764213369999999999999877778999999999987204524676659899999999999999999999999
Q 000909 649 SFFRLLSLNAPEWKQGLIGSLSAIAVGSVQPTYALTIGGMISAFFAKSHSEMQSRIRTYSLIFCSLSLISLAFNLLQHYN 728 (1230)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1230)
.+++++++.++.++.+..+.++..+.+...+..++.++.+++...... .. .........++++.++..++.++..+.
T Consensus 12 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (582)
T 3b60_A 12 TFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKT--DR-SVLLWMPLVVIGLMILRGITSYISSYC 88 (582)
T ss_dssp HHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTST--TH-HHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999884368--65-799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999729932322246773479999962199999999988999999999999999999999899
Q 000909 729 FAYMGGRLTKRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVAIAMIMGLVVAWK 808 (1230)
Q Consensus 729 ~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 808 (1230)
..+.+.+...++|.+++++++++|+.||+ ++++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.
T Consensus 89 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 166 (582)
T 3b60_A 89 ISWVSGKVVMTMRRRLFGHMMGMPVAFFD--KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQ 166 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSTHHH--HSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999809999978--8986589999998799999999999999999999999999999998099
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999689999999999999999998812199998730999999999998899999999999
Q 000909 809 LAVVMIAVQPLTILCFYTRKVLLSSVSTNFVKAQNRSTQIAVEAVINHRIVTSFGSAGKVLQIFDEAQEEPRKQARKKSW 888 (1230)
Q Consensus 809 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 888 (1230)
+++++++..|+..+......+...+..++..+..++..+.+.|.+.|+++||+|+.|+.+.++|++..++..+...+..+
T Consensus 167 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3b60_A 167 LSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVS 246 (582)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999961999998376899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999999999999986297388889999999999999999999999999999999999999871688
Q 000909 889 LAGIGMGSAQCLTFMSWALDFWYGGTLVQKGQISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGSTAVASVFKILDRQS 968 (1230)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 968 (1230)
......+....+..+..++++|+|++++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b60_A 247 ASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQ 326 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998499989999999999999999999999999999999999999999975998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 88898888989888876555570999988998799887443111027971893999984899997889999851256998
Q 000909 969 LIPGSSQAGDGTRGSKLQKISGKIEMRRVDFAYPSRPDALVLRQFSMEVKPGTSVGLVGKSGCGKSTVIGLIQRFYDVEQ 1048 (1230)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGsGKSTL~~lL~rl~~~~~ 1048 (1230)
+.+. . ..+.++..+.|+++||+|+|++. +.++|+|+||++++||++||+||||||||||+++|.|+++|++
T Consensus 327 ~~~~------~--~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~ 397 (582)
T 3b60_A 327 EKDE------G--KRVIDRATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 397 (582)
T ss_dssp SCCC------C--CBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSE
T ss_pred CCCC------C--CCCCCCCCCCEEEEEEEEECCCC-CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCC
T ss_conf 7667------7--77777888847999889973999-9744156159976999899989999989999999861068989
Q ss_pred CEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHHCCCC-CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCC
Q ss_conf 74888994068989688865016870256678644888862399-99999899999998230999981202333211599
Q 000909 1049 GSVRVDGMDVRELDVHWYRKHTALVSQEPVIYAGNIRDNIVFGK-LDASENEVVEAARAANAHEFISSLKDGYETECGER 1127 (1230)
Q Consensus 1049 G~I~idG~di~~~~~~~lR~~i~~V~Qd~~LF~gTIreNi~~~~-~~~s~~~i~~al~~a~l~~~i~~Lp~Gldt~ige~ 1127 (1230)
|+|.+||+|+++++.+++|+++++|||+|.+|++|++||+.++. ++.++++++++++.++++++++++|+|+||.++++
T Consensus 398 G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~ 477 (582)
T 3b60_A 398 GHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGEN 477 (582)
T ss_dssp EEEEETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTT
T ss_pred CEEEECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC
T ss_conf 76979999823069999996080880687477878999985459999899999999998497999984504114511479
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEE
Q ss_conf 99999259999999999702998778616667868897999999999860998599981591466403989999496798
Q 000909 1128 GVQLSGGQRQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMMGRTTIVVAHRLNTIKKLDSIALVADGRVV 1207 (1230)
Q Consensus 1128 G~~LSgGQrQrlaLARAll~~~~ILiLDEaTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Iv 1207 (1230)
|.+||||||||++||||++++|++++||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|++|++|+++
T Consensus 478 ~~~LSgGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 557 (582)
T 3b60_A 478 GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIV 557 (582)
T ss_dssp SCSSCHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEE
T ss_conf 88789999999999999972899899978655579899999999999996799799994547789859989999788898
Q ss_pred EECCHHHHHHCCCCCHHHHHHCC
Q ss_conf 80597689510652088864109
Q 000909 1208 ERGTYAQLTHMRGAFFNLATLQS 1230 (1230)
Q Consensus 1208 e~Gt~~eL~~~~g~y~~l~~~q~ 1230 (1230)
+.|+|+||++.++.|+++++.|.
T Consensus 558 ~~g~~~~l~~~~~~~~~~~~~q~ 580 (582)
T 3b60_A 558 ERGTHSELLAQHGVYAQLHKMQF 580 (582)
T ss_dssp EEECHHHHHHHTSSHHHHHHHTC
T ss_pred EECCHHHHHHCCCHHHHHHHHHC
T ss_conf 84589999876988999999750
Done!