Query 000912
Match_columns 1229
No_of_seqs 401 out of 3392
Neff 7.9
Searched_HMMs 29240
Date Tue Mar 26 16:48:31 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000912.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_680-684//hhsearch_pdb/000912hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 1002.5 70.2 897 52-1133 31-992 (995)
2 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 988.6 53.6 875 52-1133 74-1017(1028)
3 3ixz_A Potassium-transporting 1.0 1 1 988.5 74.2 878 52-1136 79-1026(1034)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 867.5 45.3 771 52-1133 94-881 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 858.6 -22.0 782 52-1133 39-844 (885)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 608.3 34.7 494 113-931 191-696 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 604.4 40.2 493 114-937 178-681 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 596.6 38.0 493 106-931 95-598 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 204.8 0.0 136 687-915 124-262 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 172.1 15.0 271 403-914 14-287 (287)
No 1
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=1002.54 Aligned_cols=897 Identities=20% Similarity=0.211 Sum_probs=658.2
Q ss_pred CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCC------CCCCCHHHHHHHHHHHHHHH
Q ss_conf 7877888997011388732133279999998778999999998772224-7776------76320145789999999999
Q 000912 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP-MSPV------NPVTNVVPLSLVLLVSLIKE 124 (1229)
Q Consensus 52 ~~~~~~yg~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~-~s~~------~~~~~i~pl~~vl~~s~ik~ 124 (1229)
++|+.+||.|+++++|+..++ +.|++||++++++++++++++++++ +.+. .|+..+ .++++++++++.+
T Consensus 31 ~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~i~ 106 (995)
T 3ar4_A 31 KRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPF-VILLILIANAIVG 106 (995)
T ss_dssp HHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH-HHHHHHHHHHHHH
T ss_conf 999975688732898898699---999999988999999999999999886025665403478768-8667889999999
Q ss_pred HHHHHHHHHH---HHHHCCCCEEEEECCE--EEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCCC
Q ss_conf 9999998530---2310486199952992--9997224675592999826973485287840038987089982555663
Q 000912 125 AWEDWKRFQN---DMTINSTPVEVLQGQR--WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGE 199 (1229)
Q Consensus 125 ~~ed~~r~~~---d~~~n~~~~~V~r~g~--~~~i~~~~l~vGDIV~v~~ge~vPAD~ilLsss~~~g~~~Vdts~LdGE 199 (1229)
.++++|..++ .+++++.+++|+|+|. .++++|++|+|||||.|++||.||||++|++.+. +.|+||||+||||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTGE 184 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGE 184 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHCC
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEEEEE--CEEEEECCCCCCC
T ss_conf 99999999999998710897389993798647997899987787899889784354489998850--4399982524688
Q ss_pred CCCEEECCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECEEEECCCEEEEEEEEECC
Q ss_conf 33122201210124689211125612999507998741136799852830268977536504064037709999998273
Q 000912 200 TNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGH 279 (1229)
Q Consensus 200 t~~k~K~~~~~t~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~i~gvVv~tG~ 279 (1229)
|+|+.|.+.+... | +..+.+.+|++++||.+++ +++.|+|++||.
T Consensus 185 S~pv~K~~~~~~~-------------------~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG~ 229 (995)
T 3ar4_A 185 SVSVIKHTEPVPD-------------------P---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGV 229 (995)
T ss_dssp CSCEEECCSCCCC-------------------T---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGG
T ss_pred CCCEECCCCCCCC-------------------C---------------CCCCCCCCCEEECCCEEEC-CEEEEEEEECCC
T ss_conf 7633400456677-------------------6---------------6675554546761878984-458999997672
Q ss_pred HHHHHHC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 1366531---4799987578999999999999999999999999988633035412323467899866787898725699
Q 000912 280 ETKVMMN---SMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLV 356 (1229)
Q Consensus 280 ~Tk~~~n---~~~~~~k~s~le~~~n~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 356 (1229)
+|++++. ...++.+++++++.+|++..++..+.++++++.++....+.. ..+ . .......
T Consensus 230 ~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------~-~~~~~~~ 292 (995)
T 3ar4_A 230 STEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-DPV---------------H-GGSWIRG 292 (995)
T ss_dssp GSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-SCS---------------S-SSCHHHH
T ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCC---------------C-CCHHHHH
T ss_conf 2198999997325787899389999999999999999999999999998741-433---------------4-6407999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 99999999988339333257888999999976453204522222248998300246654568423799951478655573
Q 000912 357 FVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNL 436 (1229)
Q Consensus 357 ~~~~~~~~l~l~~~~iPisL~v~i~i~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~ 436 (1229)
....|..++.+++.+||++||++++++...+ +..+ +++++++|+++.+|+||++++||||||||||+|+
T Consensus 293 ~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~-~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~ 361 (995)
T 3ar4_A 293 AIYYFKIAVALAVAAIPEGLPAVITTCLALG-TRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 361 (995)
T ss_dssp HHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCC
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHHH----------CCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 9999999999999866760489999999999-9984----------4178486134155550383399765888766585
Q ss_pred EEEEEEEECCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 69999999788746882355333321048888633310000015888889856530034699993569999999711451
Q 000912 437 MEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHT 516 (1229)
Q Consensus 437 m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~~~lalCht 516 (1229)
|++.+|++.+..|+.... ........ .++.........+........+...+++.++++||+
T Consensus 362 m~v~~~~~~~~~~~~~~~-~~~~~~~~-----------------~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 423 (995)
T 3ar4_A 362 MSVCKMFIIDKVDGDFCS-LNEFSITG-----------------STYAPEGEVLKNDKPIRSGQFDGLVELATICALCND 423 (995)
T ss_dssp CEEEEEEEEEEEETTEEE-EEEEEECC-----------------SSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCC
T ss_pred EEEEEEEECCCCCCCCCC-CCEEECCC-----------------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 699999834755676554-30254047-----------------776886310136643444455899999999987488
Q ss_pred EEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEE
Q ss_conf 47445699994287238953999999999869499854696489993443234741018999968524788782389999
Q 000912 517 VLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVC 596 (1229)
Q Consensus 517 v~~~~~~~~~~~~y~a~spdE~ALv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmSvIv 596 (1229)
+.++.++..+. ....++|+|.||+.++++.|+ +. +....+...+..... ....+..|++++.+||+|+||||||++
T Consensus 424 ~~~~~~~~~~~-~~~~g~p~E~Al~~~a~~~g~-~~-~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~pF~s~rk~msvi~ 499 (995)
T 3ar4_A 424 SSLDFNETKGV-YEKVGEATETALTTLVEKMNV-FN-TEVRNLSKVERANAC-NSVIRQLMKKEFTLEFSRDRKSMSVYC 499 (995)
T ss_dssp CEEEEETTTTE-EEEESCHHHHHHHHHHHHHCT-TC-CCCTTSCTTTSTTHH-HHHHHHHEEEEEEEEEETTTTEEEEEE
T ss_pred CCCCCCCCCCC-EEECCCCCHHHHHHHHHHCCC-CC-CCCCCCCCCCCCCCC-HHHHHHHCCEEEEEECCCCCCEEEEEE
T ss_conf 80565688983-255479647999999998399-64-100013420101210-155664174577740488887569998
Q ss_pred ECCCC-----CEEEEEECCCHHHHHHHHCC---------CHHHHHHHHHHHHHH--HHCCCEEEEEEEEECCHHHHHHHH
Q ss_conf 83899-----29999925605678985158---------545799999999999--614671889999934987999999
Q 000912 597 RYADG-----RLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQF--GSSGLRTLCLAYRDLSPDMYERWN 660 (1229)
Q Consensus 597 ~~~~g-----~~~l~~KGad~~I~~~l~~~---------~~~~~~~~~~~l~~~--a~~GlRtL~~A~r~l~~~e~~~~~ 660 (1229)
+.++| +..+|+||||+.|+++|... +.+.++.+.+++++| +.+|+|||++|||+++..+
T Consensus 500 ~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~----- 574 (995)
T 3ar4_A 500 SPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKR----- 574 (995)
T ss_dssp EESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCG-----
T ss_pred ECCCCCCCCCCEEEEECCCHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC-----
T ss_conf 348987666444999758879999854054428973249999999999999987763056148899998347651-----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf 99999963134499999999997511735766620034479891999999998599399992798888999999838766
Q 000912 661 EKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1229)
Q Consensus 661 ~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLTGD~~eTAi~Ia~~~gLi~ 740 (1229)
+...+.+ ...++.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+.+||.+||++|||..
T Consensus 575 -----~~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~ 644 (995)
T 3ar4_A 575 -----EEMVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG 644 (995)
T ss_dssp -----GGCCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred -----CCCCCCC-----CHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC
T ss_conf -----1122234-----024455306948999985258896669999999998699899989997899999999839677
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHH
Q ss_conf 79608999178753211122698379987725999999999989720012335886089997750338842815899998
Q 000912 741 NEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILL 820 (1229)
Q Consensus 741 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvidG~~l~~~l~~~l~~~f~ 820 (1229)
.+... . ..+++|+.+....++++.+.+
T Consensus 645 ~~~~i------~----------------------------------------------~~~~~g~~~~~l~~~~~~~~~- 671 (995)
T 3ar4_A 645 ENEEV------A----------------------------------------------DRAYTGREFDDLPLAEQREAC- 671 (995)
T ss_dssp TTCCC------T----------------------------------------------TTEEEHHHHHTSCHHHHHHHH-
T ss_pred CCCCC------C----------------------------------------------CEEEECHHHHHCCHHHHHHHH-
T ss_conf 88753------5----------------------------------------------348983664628999999987-
Q ss_pred HHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE-CCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 53202773399990901099999999833597399954895485546624700883-48612279752337551022311
Q 000912 821 NLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLT 899 (1229)
Q Consensus 821 ~l~~~~~~vI~~R~sP~qKa~iV~~lk~~~g~~vlaIGDG~NDv~mlq~AdVGVgi-sg~e~~qA~~asD~~i~~f~~l~ 899 (1229)
++..+|||++|+||+.+|+.++ ..|+.|+|+|||+||++||++|||||++ +|.+. |+.+||+++.++++..
T Consensus 672 -----~~~~v~~r~~P~~K~~~v~~l~-~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~aAd~vl~~~~~~~ 743 (995)
T 3ar4_A 672 -----RRACCFARVEPSHKSKIVEYLQ-SYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFST 743 (995)
T ss_dssp -----HHCCEEESCCSSHHHHHHHHHH-TTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHTCSEEETTCCHHH
T ss_pred -----HHCCEEEEECHHHHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHCCEEEEECCCCHH--HHHHCCEEECCCCHHH
T ss_conf -----5373899708999999999999-7799799983881449999878967996788999--9973889977787789
Q ss_pred CE-EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 01-11013579999999999999999999999999987507545112246999999878555679876514667893665
Q 000912 900 DL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLS 978 (1229)
Q Consensus 900 ~l-ll~hGr~~y~ri~~~i~y~fykni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~lg~~d~dv~~~~~ 978 (1229)
.. ++.|||++|+|+++++.|.+++|+...++.+++.++.. ..++.+++++|+|++++.+|++++|.+++ ++++|
T Consensus 744 i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~~~m 818 (995)
T 3ar4_A 744 IVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEALIPVQLLWVNLVTDGLPATALGFNPP--DLDIM 818 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CTTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHH
T ss_conf 99999998999999999999999999999999999999847---62578999999999998877776306777--75687
Q ss_pred HCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HCC-CC-C--CC-----------CCCCCC-----C---C
Q ss_conf 1090414701247667879999999999999999999987-306-88-7--78-----------999302-----3---0
Q 000912 979 KKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSS-AT-G--QN-----------SSGKIF-----G---I 1034 (1229)
Q Consensus 979 ~~~P~lY~~~~~~~~~~~~~f~~~~~~~~~~s~v~f~~~~-~~~-~~-~--~~-----------~~g~~~-----~---~ 1034 (1229)
.++|+ .++..+++.+.++.|++.|++++++.++.+. ++. .. . .. .++... + .
T Consensus 819 ~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (995)
T 3ar4_A 819 DRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEA 894 (995)
T ss_dssp GSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGC
T ss_pred HCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 37999----97645448999999999999999999999999998515665433000001122344433334332210010
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCC-----C--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-CCH
Q ss_conf 0001367789999999887543034-----3--0567899887899999999998512577888873578899881-049
Q 000912 1035 WDVSTMAFTCVVVTVNLRLLMMCNT-----I--TRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STF 1106 (1229)
Q Consensus 1035 ~~~~~~~~~~~v~~~~~~~~l~~~~-----~--t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~ 1106 (1229)
....|++|+++++...++.. .+++ | ..+.+..++.++++.++..++..+++ ....++.+. .++
T Consensus 895 ~~~~t~~f~~lv~~~~~~~~-~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p--------~~~~~f~~~~l~~ 965 (995)
T 3ar4_A 895 PEPMTMALSVLVTIEMCNAL-NSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVD--------PLPMIFKLKALDL 965 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHST--------HHHHHTTCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH--------HHHHHHCCCCCCH
T ss_conf 13565999999999999999-86025543100577547999999999999999999888--------7777611578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 789999999999899999999988850
Q 000912 1107 YFYFTLILVPVLALLGDFIFQGVQRWF 1133 (1229)
Q Consensus 1107 ~~wl~~ll~~~~~ll~~~~~k~~~r~~ 1133 (1229)
.+|+.++++.++.++.+.++|+++|.|
T Consensus 966 ~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 966 TQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999999994117
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=988.59 Aligned_cols=875 Identities=19% Similarity=0.196 Sum_probs=663.5
Q ss_pred CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CC---C----CCCCCCHHHHHHHHHHHHH
Q ss_conf 7877888997011388732133279999998778999999998772224--77---7----6763201457899999999
Q 000912 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP--MS---P----VNPVTNVVPLSLVLLVSLI 122 (1229)
Q Consensus 52 ~~~~~~yg~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~--~s---~----~~~~~~i~pl~~vl~~s~i 122 (1229)
++|+.+||.|.++.+|...++ +.|++||.++++++++++++++++. +. . .+.+...++++++++++++
T Consensus 74 ~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 150 (1028)
T 2zxe_A 74 KEILARDGPNSLTPPPTTPEW---IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150 (1028)
T ss_dssp HHHHHHHCCSCCCCCCCCCHH---HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 999986699979999999899---99999997089999999999999998751134566652007999898988889999
Q ss_pred HHHHHHHHHHHHHH---HHCCCCEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCCC
Q ss_conf 99999999853023---104861999529929997224675592999826973485287840038987089982555663
Q 000912 123 KEAWEDWKRFQNDM---TINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGE 199 (1229)
Q Consensus 123 k~~~ed~~r~~~d~---~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~vPAD~ilLsss~~~g~~~Vdts~LdGE 199 (1229)
.++++++|..++.+ ++++.+++|+|+|+++++++++|+|||||.|++||.||||++|++++ .|+||||+||||
T Consensus 151 ~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~VdeS~LTGE 226 (1028)
T 2zxe_A 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAH----GCKVDNSSLTGE 226 (1028)
T ss_dssp HHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEE----EEEEECHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEECEEEEEEEC----CEEEECCCCCCC
T ss_conf 9999999999999998852787269998999999988897867779989979841228999608----589986756788
Q ss_pred CCCEEECCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECEEEECCCEEEEEEEEECC
Q ss_conf 33122201210124689211125612999507998741136799852830268977536504064037709999998273
Q 000912 200 TNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGH 279 (1229)
Q Consensus 200 t~~k~K~~~~~t~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~i~gvVv~tG~ 279 (1229)
|+|+.|.+.+.. ..|++.+|++++||.+.+ +++.|+|++||.
T Consensus 227 S~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~ 268 (1028)
T 2zxe_A 227 SEPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYTGD 268 (1028)
T ss_dssp CSCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEECGG
T ss_pred CCCEECCCCCCC-------------------------------------CCCCCCCCEEEECCEEEC-CEEEEEEEEECC
T ss_conf 763443467788-------------------------------------884453354873746970-169999998451
Q ss_pred HHHHHH---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 136653---14799987578999999999999999999999999988633035412323467899866787898725699
Q 000912 280 ETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLV 356 (1229)
Q Consensus 280 ~Tk~~~---n~~~~~~k~s~le~~~n~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 356 (1229)
+|++++ +...++.+++++++.+++++.+++.+.++++++.++... +.. ..|
T Consensus 269 ~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~-~~~-~~~------------------------ 322 (1028)
T 2zxe_A 269 RTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-ILG-YSW------------------------ 322 (1028)
T ss_dssp GSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTT-CCH------------------------
T ss_pred CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCC-CCH------------------------
T ss_conf 439889998603788788928999999999999999999999999999-736-769------------------------
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 99999999988339333257888999999976453204522222248998300246654568423799951478655573
Q 000912 357 FVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNL 436 (1229)
Q Consensus 357 ~~~~~~~~l~l~~~~iPisL~v~i~i~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~ 436 (1229)
...+..++.+++..||++||++++++..++ +.++ +++++++|+++.+|+||++++||||||||||+|+
T Consensus 323 -~~~~~~~i~llv~~iP~~Lp~~vti~l~~~-~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~ 390 (1028)
T 2zxe_A 323 -LEAVIFLIGIIVANVPEGLLATVTVCLTLT-AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR 390 (1028)
T ss_dssp -HHHHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSS
T ss_pred -HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHH----------HHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCE
T ss_conf -999999999999974741799999999999-9998----------5589164445676641476299516888888773
Q ss_pred EEEEEEEECCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 69999999788746882355333321048888633310000015888889856530034699993569999999711451
Q 000912 437 MEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHT 516 (1229)
Q Consensus 437 m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~~~lalCht 516 (1229)
|++.+|++++..|.....+. . .+.. .+.......+++.++++||+
T Consensus 391 m~v~~~~~~~~~~~~~~~~~------~-----------------~~~~------------~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 391 MTVAHMWFDNQIHEADTTEN------Q-----------------SGAA------------FDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp CEEEEEEETTEEEECCCCTT------C-----------------CSCC------------CCSSCHHHHHHHHHHHHSCC
T ss_pred EEEEEEEECCEEEECCCCCC------C-----------------CCCC------------CCCCCHHHHHHHHHHHHCCC
T ss_conf 89999998984651367777------6-----------------5544------------46677899999999986578
Q ss_pred EEECCCCCCCC--EEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCEEEE
Q ss_conf 47445699994--2872389539999999998694998546964899934432347410189999685247887823899
Q 000912 517 VLPEGDESPER--ITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSV 594 (1229)
Q Consensus 517 v~~~~~~~~~~--~~y~a~spdE~ALv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmSv 594 (1229)
+.++.+.+... -.+..++|+|.||+++|+..|... .. .+..|+.+..+||+|+|||||+
T Consensus 436 ~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~-------------~~------~~~~~~~~~~~pF~s~rk~msv 496 (1028)
T 2zxe_A 436 AVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV-------------QG------MRDRNPKIVEIPFNSTNKYQLS 496 (1028)
T ss_dssp CEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH-------------HH------HHHHSCEEEEECCCTTTCEEEE
T ss_pred CEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCH-------------HH------HHHHCCEEEEECCCCCCCEEEE
T ss_conf 7650477777664530078940999999999958988-------------89------8874826787044766664799
Q ss_pred EEECC---CCCEEEEEECCCHHHHHHHHC---------CCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHH
Q ss_conf 99838---992999992560567898515---------854579999999999961467188999993498799999999
Q 000912 595 VCRYA---DGRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 662 (1229)
Q Consensus 595 Iv~~~---~g~~~l~~KGad~~I~~~l~~---------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~ 662 (1229)
+++.+ +|++.+|+||||+.|+++|.. .+.+.++.+.+++++++.+|+|||++|||+++++++.++.
T Consensus 497 i~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~-- 574 (1028)
T 2zxe_A 497 IHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY-- 574 (1028)
T ss_dssp EEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--
T ss_pred EEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCC--
T ss_conf 994057888717999938828999874565338972128889999999999999855997999998746822134201--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC
Q ss_conf 99996313449999999999751173576662003447989199999999859939999279888899999983876679
Q 000912 663 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 742 (1229)
Q Consensus 663 ~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLTGD~~eTAi~Ia~~~gLi~~~ 742 (1229)
.. +++ ..+.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+.+||.+||++|||..++
T Consensus 575 ------~~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~ 642 (1028)
T 2zxe_A 575 ------PF-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEG 642 (1028)
T ss_dssp ------CC-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTT
T ss_pred ------CC-CHH-----HHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC
T ss_conf ------24-624-----555554380998651157899844899999999869979998899779999999986988788
Q ss_pred CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHH
Q ss_conf 6089991787532111226983799877259999999999897200-123358860899977503388428158999985
Q 000912 743 MKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQ-YIHSISGEKLALIIDGKCLMYALDPSLRVILLN 821 (1229)
Q Consensus 743 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lvidG~~l~~~l~~~l~~~f~~ 821 (1229)
...+ . +.. ...+. ...........++++|..+..+.++++. +
T Consensus 643 ~~~i---------~-----------------~~~-------~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~----~ 685 (1028)
T 2zxe_A 643 NETI---------E-----------------DIA-------ARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD----D 685 (1028)
T ss_dssp CCCH---------H-----------------HHH-------HHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHH----H
T ss_pred CHHH---------H-----------------HHH-------HHCCCCHHHCCCCCCCEEEEECHHHHHCCHHHHH----H
T ss_conf 3367---------7-----------------777-------6418632221555662699880885647999999----9
Q ss_pred HHHCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEEC--CCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 32027733999909010999999998335973999548954855466247008834--8612279752337551022311
Q 000912 822 LSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRFLT 899 (1229)
Q Consensus 822 l~~~~~~vI~~R~sP~qKa~iV~~lk~~~g~~vlaIGDG~NDv~mlq~AdVGVgis--g~e~~qA~~asD~~i~~f~~l~ 899 (1229)
+...++.++|||++|+||..+|+.+ ++.|++|+|+|||+||++||++|||||++. |++. |+.+||+++.+.++..
T Consensus 686 ~~~~~~~~v~ar~~P~~K~~iV~~l-q~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~aAD~Vl~~~~~~~ 762 (1028)
T 2zxe_A 686 ILHYHTEIVFARTSPQQKLIIVEGC-QRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV--SKQAADMILLDDNFAS 762 (1028)
T ss_dssp HHHHCSEEEEESCCHHHHHHHHHHH-HHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH--HHHHCSEEETTCCTHH
T ss_pred HHHHCCCEEEEECCHHHHHHHHHHH-HHCCCEEEEECCCCCHHHHHHHCCCEEEECCCCCHH--HHHHCCEEECCCCHHH
T ss_conf 9862796799985888999999999-968998999858853399998689119967765888--9985489955798779
Q ss_pred CE-EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 01-11013579999999999999999999999999987507545112246999999878555679876514667893665
Q 000912 900 DL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLS 978 (1229)
Q Consensus 900 ~l-ll~hGr~~y~ri~~~i~y~fykni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~lg~~d~dv~~~~~ 978 (1229)
.. ++.|||++|+|+++++.|.+++|+...+..+++.++.. ..++.+++++|.|++++.+|+++++. |+. ++++|
T Consensus 763 I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~---~~~l~~~qil~inl~~d~~pa~al~~-e~~-~~~~m 837 (1028)
T 2zxe_A 763 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNV---PLPLGTVTILCIDLGTDMVPAISLAY-EQA-ESDIM 837 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCC---CCSSCHHHHHHHHTTTTHHHHHHGGG-CCC-SSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHCC-CCC-CHHHH
T ss_conf 99999999999999999999999999999999999999766---64457999999999999999998602-866-14565
Q ss_pred HCCCHHHHCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHH-HCCCCCC---------------C------CCCCCC---
Q ss_conf 10904147012476678799999-99999999999999987-3068877---------------8------999302---
Q 000912 979 KKYPQLYQEGIKNVFFTWRVVAI-WAFFSVYQSLVLYNCVT-TSSATGQ---------------N------SSGKIF--- 1032 (1229)
Q Consensus 979 ~~~P~lY~~~~~~~~~~~~~f~~-~~~~~~~~s~v~f~~~~-~~~~~~~---------------~------~~g~~~--- 1032 (1229)
.++|+- .+.+.+++++.++. |+..|++++++.|+.++ .+..... . +.|...
T Consensus 838 ~~~Pr~---~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1028)
T 2zxe_A 838 KRQPRN---PKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYE 914 (1028)
T ss_dssp GSCCCC---TTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHH
T ss_pred CCCCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHH
T ss_conf 159999---52134527999999999999999999999999987406766201310220010356542113455322234
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHH-HCCCCHH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf ----30000136778999999988754-3034305----67899887899999999998512577888873578899881
Q 000912 1033 ----GIWDVSTMAFTCVVVTVNLRLLM-MCNTITR----FHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM 1103 (1229)
Q Consensus 1033 ----~~~~~~~~~~~~~v~~~~~~~~l-~~~~~t~----~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 1103 (1229)
......|+.|+++++...+.+.. .+...+. +.+..++.++++.++..++..++|+ ...+|.+.
T Consensus 915 ~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~--------~~~~f~~~ 986 (1028)
T 2zxe_A 915 QRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPG--------TDVALRMY 986 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTT--------HHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH--------HHHHHCCC
T ss_conf 4445666788999999999999999987468751101577688999999999999999998656--------77642188
Q ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -049789999999999899999999988850
Q 000912 1104 -STFYFYFTLILVPVLALLGDFIFQGVQRWF 1133 (1229)
Q Consensus 1104 -~~~~~wl~~ll~~~~~ll~~~~~k~~~r~~ 1133 (1229)
.++..|+.++.+.+..++.+.+.|++.|.+
T Consensus 987 ~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 987 PLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp CCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8999999999999999999999999998706
No 3
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=988.48 Aligned_cols=878 Identities=17% Similarity=0.176 Sum_probs=671.4
Q ss_pred CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CC-------CCCCCCCHHHHHHHHHHHHH
Q ss_conf 7877888997011388732133279999998778999999998772224--77-------76763201457899999999
Q 000912 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP--MS-------PVNPVTNVVPLSLVLLVSLI 122 (1229)
Q Consensus 52 ~~~~~~yg~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~--~s-------~~~~~~~i~pl~~vl~~s~i 122 (1229)
++|+.+||.|.++..|...++ +.|++||.++++++++++++++++. +. ..+.+...++++++++++++
T Consensus 79 ~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 79 AELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHHHHCCCCCCCCCCCCHH---HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEHHHH
T ss_conf 999985099989998999889---99999984738999999999999999874034777654420564243013227999
Q ss_pred HHHHHHHHHHHHHHHH---CCCCEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCCC
Q ss_conf 9999999985302310---4861999529929997224675592999826973485287840038987089982555663
Q 000912 123 KEAWEDWKRFQNDMTI---NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGE 199 (1229)
Q Consensus 123 k~~~ed~~r~~~d~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~vPAD~ilLsss~~~g~~~Vdts~LdGE 199 (1229)
.++++++|+.++.+++ .+.+++|+|+|++++++|++|+|||||.|++||.||||++||++++. .||||+||||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~l----~VdES~LTGE 231 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGR----KVDNSSLTGE 231 (1034)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEECCCEEEEEECCC----EEEECCCCCC
T ss_conf 999999999999999762489735999999899988898798858998579643587699970880----5883366788
Q ss_pred CCCEEECCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECEEEECCCEEEEEEEEECC
Q ss_conf 33122201210124689211125612999507998741136799852830268977536504064037709999998273
Q 000912 200 TNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGH 279 (1229)
Q Consensus 200 t~~k~K~~~~~t~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~i~gvVv~tG~ 279 (1229)
|.|+.|.+.+.... ........|.||.+.+|. +.|+|++||.
T Consensus 232 S~pv~K~~~~~~~~-----------------~~~~~n~~f~GT~v~~G~---------------------~~~vVv~tG~ 273 (1034)
T 3ixz_A 232 SEPQTRSPECTHES-----------------PLETRNIAFFSTMCLEGT---------------------AQGLVVNTGD 273 (1034)
T ss_pred CCCEECCCCCCCCC-----------------CCCCCCCEECCEEEEEEC---------------------CEEEEEEEHH
T ss_conf 77766557776656-----------------323445122040698604---------------------2499996025
Q ss_pred HHHHH---HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 13665---314799987578999999999999999999999999988633035412323467899866787898725699
Q 000912 280 ETKVM---MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLV 356 (1229)
Q Consensus 280 ~Tk~~---~n~~~~~~k~s~le~~~n~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 356 (1229)
+|.++ +.....+.+++++++.++++...+..+.++++++.++...+... .
T Consensus 274 ~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------------~ 326 (1034)
T 3ixz_A 274 RTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY---------------------------T 326 (1034)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---------------------------H
T ss_conf 4374089986203566789189999999999999999999999999999641---------------------------2
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 99999999988339333257888999999976453204522222248998300246654568423799951478655573
Q 000912 357 FVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNL 436 (1229)
Q Consensus 357 ~~~~~~~~l~l~~~~iPisL~v~i~i~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~ 436 (1229)
....++.++.+++.+||++||++++++..++ +.++ +++++++|+++.+|+||++++||||||||||+|+
T Consensus 327 ~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~-~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~ 395 (1034)
T 3ixz_A 327 FLRAMVFFMAIVVAYVPEGLLATVTVCLSLT-AKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNR 395 (1034)
T ss_pred HHHHHHHHHHHHHHEECCCCHHHHHHHHHHH-HHHH----------HHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCE
T ss_conf 9999999999988202665089999999999-9987----------3388286476788861587299728978723683
Q ss_pred EEEEEEEECCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 69999999788746882355333321048888633310000015888889856530034699993569999999711451
Q 000912 437 MEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHT 516 (1229)
Q Consensus 437 m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~~~lalCht 516 (1229)
|++.++++++..|.....+... +.. ..........++.++++||+
T Consensus 396 m~v~~~~~~~~~~~~~~~~~~~-----------------------~~~------------~~~~~~~~~~l~~~~~lc~~ 440 (1034)
T 3ixz_A 396 MTVSHLWFDNHIHSADTTEDQS-----------------------GQT------------FDQSSETWRALCRVLTLCNR 440 (1034)
T ss_pred EEEEEEEECCCCCCCCCCCCCC-----------------------CCC------------CCCCCHHHHHHHHHHHHHCC
T ss_conf 7999999779512256766656-----------------------655------------67677899999999887162
Q ss_pred EEECCCCCCC--CEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCEEEE
Q ss_conf 4744569999--42872389539999999998694998546964899934432347410189999685247887823899
Q 000912 517 VLPEGDESPE--RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSV 594 (1229)
Q Consensus 517 v~~~~~~~~~--~~~y~a~spdE~ALv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmSv 594 (1229)
+....+++.. .-.+..++|+|.|++.++...+.... . ....|+.+..+||+|+||||++
T Consensus 441 a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~------------~-------~~~~~~~~~~~pF~s~rk~m~~ 501 (1034)
T 3ixz_A 441 AAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM------------G-------YRERFPKVCEIPFNSTNKFQLS 501 (1034)
T ss_pred CEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHH------------H-------HHHHCCCEEEEEECCCCCEEEE
T ss_conf 66535767776657435549259999999998578868------------8-------8974860699503577726899
Q ss_pred EEECCC---CCEEEEEECCCHHHHHHHHC---------CCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHH
Q ss_conf 998389---92999992560567898515---------854579999999999961467188999993498799999999
Q 000912 595 VCRYAD---GRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 662 (1229)
Q Consensus 595 Iv~~~~---g~~~l~~KGad~~I~~~l~~---------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~ 662 (1229)
+++.++ +++.+|+||||+.|+++|+. .+++.++.+.+++++++.+|+|||++|||.++++++..+...
T Consensus 502 v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~ 581 (1034)
T 3ixz_A 502 IHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAF 581 (1034)
T ss_pred EEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCC
T ss_conf 99833788860899996884999997377552896401999999999999999871475823686785580004321124
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC
Q ss_conf 99996313449999999999751173576662003447989199999999859939999279888899999983876679
Q 000912 663 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 742 (1229)
Q Consensus 663 ~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLTGD~~eTAi~Ia~~~gLi~~~ 742 (1229)
. .+..+.+|+||+|+|+++++|++|++++++|+.|+++||++||+|||+.+||.+||++|||..++
T Consensus 582 ~--------------~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~ 647 (1034)
T 3ixz_A 582 D--------------VEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEG 647 (1034)
T ss_pred C--------------HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCC
T ss_conf 5--------------34430222486798887136887065999999999869969999699779999999986999887
Q ss_pred CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCEEEEEECCHHHHHHCCHHHHHHHHH
Q ss_conf 608999178753211122698379987725999999999989720012-3358860899977503388428158999985
Q 000912 743 MKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYI-HSISGEKLALIIDGKCLMYALDPSLRVILLN 821 (1229)
Q Consensus 743 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvidG~~l~~~l~~~l~~~f~~ 821 (1229)
...+ . +. ........ ..........+++|..+....++++.+
T Consensus 648 ~~~i-------------------------~-~~-------~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~---- 690 (1034)
T 3ixz_A 648 SETV-------------------------E-DI-------AARLRVPVDQVNRKDARACVINGMQLKDMDPSELVE---- 690 (1034)
T ss_pred CHHH-------------------------H-HH-------HHHHCCCCHHCCCCCCCEEEEECHHHHHCCHHHHHH----
T ss_conf 2478-------------------------8-88-------876176500025445431677167666389999999----
Q ss_pred HHHCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 32027733999909010999999998335973999548954855466247008834861227975233755102231101
Q 000912 822 LSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL 901 (1229)
Q Consensus 822 l~~~~~~vI~~R~sP~qKa~iV~~lk~~~g~~vlaIGDG~NDv~mlq~AdVGVgisg~e~~qA~~asD~~i~~f~~l~~l 901 (1229)
+...++.++|||++|+||..+|+.+ ++.|.+|+|+|||.||++||++||+||+|.++....|+.+||+++.++++....
T Consensus 691 ~~~~~~~~v~ar~~P~~K~~iv~~l-q~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~ 769 (1034)
T 3ixz_A 691 ALRTHPEMVFARTSPQQKLVIVESC-QRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIV 769 (1034)
T ss_pred HHHHCCCEEEEECCHHHHHHHHHHH-HHCCCEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHCCEEECCCCCHHHH
T ss_conf 9873782699966989999999999-976999999879577699999789329807756799998549996668833999
Q ss_pred -EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
Q ss_conf -1101357999999999999999999999999998750754511224699999987855567987651466789366510
Q 000912 902 -LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKK 980 (1229)
Q Consensus 902 -ll~hGr~~y~ri~~~i~y~fykni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~lg~~d~dv~~~~~~~ 980 (1229)
++.|||++|.|+++++.|.+++|+...++.+++.++. ...++.+++++|.|++++.+|+++++..+. ++++|.+
T Consensus 770 ~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e~~--~~~~m~~ 844 (1034)
T 3ixz_A 770 TGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYEKA--ESDIMHL 844 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHC
T ss_conf 99999889999999999999999999999999999982---146689999999999988888888516889--7326647
Q ss_pred CCHHHHCCC-CCCCCCHHHHHHH-HHHHHHHHHHHHHHHH-HCCCCCCC-----------CC----------CCC-----
Q ss_conf 904147012-4766787999999-9999999999999987-30688778-----------99----------930-----
Q 000912 981 YPQLYQEGI-KNVFFTWRVVAIW-AFFSVYQSLVLYNCVT-TSSATGQN-----------SS----------GKI----- 1031 (1229)
Q Consensus 981 ~P~lY~~~~-~~~~~~~~~f~~~-~~~~~~~s~v~f~~~~-~~~~~~~~-----------~~----------g~~----- 1031 (1229)
+|+ .+ +..+++.+.++.. ...|++++++.|+.++ .+...++. .+ |+.
T Consensus 845 ~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1034)
T 3ixz_A 845 RPR----NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQ 920 (1034)
T ss_pred CCC----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 998----9753445578899999999999999999999999996367762000011122233444431011121110111
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHCCC-----CH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf --2300001367789999999887543034-----30--56789988789999999999851257788887357889988
Q 000912 1032 --FGIWDVSTMAFTCVVVTVNLRLLMMCNT-----IT--RFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVL 1102 (1229)
Q Consensus 1032 --~~~~~~~~~~~~~~v~~~~~~~~l~~~~-----~t--~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 1102 (1229)
.......|+.|+++++...+.+. .+++ |. .+.+..+|+++++.+++.++..++|+ +..+|.+
T Consensus 921 ~~~~~~~~~t~~f~~lv~~q~~~~~-~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~--------~~~~f~~ 991 (1034)
T 3ixz_A 921 RLYQQYTCYTVFFISIEMCQIADVL-IRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPG--------MPNIFNF 991 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH--------HHHHHCC
T ss_conf 0000025798999999999999998-312688765426775368999999999999999998266--------7777567
Q ss_pred H-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 1-049789999999999899999999988850999
Q 000912 1103 M-STFYFYFTLILVPVLALLGDFIFQGVQRWFSPY 1136 (1229)
Q Consensus 1103 ~-~~~~~wl~~ll~~~~~ll~~~~~k~~~r~~~P~ 1136 (1229)
. .++..|+.++.+.++.++.+.++|++.|.+-+.
T Consensus 992 ~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~ 1026 (1034)
T 3ixz_A 992 MPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGS 1026 (1034)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88989999999999999999999999999747997
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=867.50 Aligned_cols=771 Identities=15% Similarity=0.155 Sum_probs=569.5
Q ss_pred CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78778889970113887321332799999987789999999987722247776763201457899999999999999998
Q 000912 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKR 131 (1229)
Q Consensus 52 ~~~~~~yg~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~s~~~~~~~i~pl~~vl~~s~ik~~~ed~~r 131 (1229)
++|+.+||.|+++..|+++| +.|++||..+.+++++++++++++. ..|... +.++++++++++.+++++++.
T Consensus 94 ~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~---g~~~~~-~~i~~vv~i~~~i~~~qe~~a 165 (920)
T 1mhs_A 94 VQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGL---EDWVDF-GVICGLLLLNAVVGFVQEFQA 165 (920)
T ss_dssp HHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTC---SCSSHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999639981588888899----9999999879999999999999999---768999-999999999999999999999
Q ss_pred HHHHHHHC---CCCEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEECCC
Q ss_conf 53023104---861999529929997224675592999826973485287840038987089982555663331222012
Q 000912 132 FQNDMTIN---STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKAL 208 (1229)
Q Consensus 132 ~~~d~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~vPAD~ilLsss~~~g~~~Vdts~LdGEt~~k~K~~~ 208 (1229)
.++.+.++ +.+++|+|+|+++++++++|+|||||.|++||.+|||++|+++++ .+.||||+|||||.|+.|.+.
T Consensus 166 ~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~---~l~VDES~LTGES~PV~K~~g 242 (920)
T 1mhs_A 166 GSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA---FLQVDQSALTGESLAVDKHKG 242 (920)
T ss_dssp HHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS---CCEEBCTTTSSCCCCEECCSS
T ss_pred HHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCC---EEEEECCCCCCCCCCEEECCC
T ss_conf 99999863359987999989989998989958897899677973366569994572---232022224788864693479
Q ss_pred CCCCCCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECEEEECCCEEEEEEEEECCHHHHHHCCC
Q ss_conf 10124689211125612999507998741136799852830268977536504064037709999998273136653147
Q 000912 209 ERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSM 288 (1229)
Q Consensus 209 ~~t~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~ 288 (1229)
+ ..|+||++.+|. +.++|++||.+|.+++...
T Consensus 243 d---------------------------~v~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I~~ 274 (920)
T 1mhs_A 243 D---------------------------QVFASSAVKRGE---------------------AFVVITATGDNTFVGRAAA 274 (920)
T ss_dssp C---------------------------EECSCBCCSCCC---------------------EEEEEEECSTTCSTTTTTS
T ss_pred C---------------------------EEECCCEEECCE---------------------EEEEEEEECCCCHHHHHHH
T ss_conf 8---------------------------630376695135---------------------9999999577678889988
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf ---99987578999999999999999999999999988633035412323467899866787898725699999999999
Q 000912 289 ---NIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLI 365 (1229)
Q Consensus 289 ---~~~~k~s~le~~~n~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 365 (1229)
.++.+++++++.++++..+++.+.++++++.++. + ||.. . .....+..++
T Consensus 275 lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~---~-----~~~~-~------------------~~~~~l~~av 327 (920)
T 1mhs_A 275 LVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVS---S-----FYRS-N------------------PIVQILEFTL 327 (920)
T ss_dssp SCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT---T-----TTTT-C------------------CHHHHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---H-----HHCC-C------------------CHHHHHHHHH
T ss_conf 7764246776499999999999999999999999999---8-----8468-8------------------6999999999
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC
Q ss_conf 88339333257888999999976453204522222248998300246654568423799951478655573699999997
Q 000912 366 TLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIG 445 (1229)
Q Consensus 366 ~l~~~~iPisL~v~i~i~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~ 445 (1229)
.+++.+||++||++++++...+ +.++ +++++++|+++.+|+||++++||||||||||+|+|++.+++..
T Consensus 328 ~llV~aiP~aLp~~vti~la~g-~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~ 396 (920)
T 1mhs_A 328 AITIIGVPVGLPAVVTTTMAVG-AAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTV 396 (920)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHH-HHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCC
T ss_pred HHHHHHCCHHHHHHHHHHHHHH-HHHH----------HHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEC
T ss_conf 9998767603777789999999-9999----------8688387057135554367689977888755553169998506
Q ss_pred CEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCC
Q ss_conf 88746882355333321048888633310000015888889856530034699993569999999711451474456999
Q 000912 446 GEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESP 525 (1229)
Q Consensus 446 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~~~lalChtv~~~~~~~~ 525 (1229)
+. + .+ .+++.+.++|+... .
T Consensus 397 ~g-----------------------------------~--------------~~-----~~ll~~a~l~~~~~---~--- 416 (920)
T 1mhs_A 397 AG-----------------------------------V--------------DP-----EDLMLTACLAASRK---K--- 416 (920)
T ss_dssp SC-----------------------------------C--------------CC-----THHHHHHHHSCCCS---S---
T ss_pred CC-----------------------------------C--------------CH-----HHHHHHHHHHCCCC---C---
T ss_conf 99-----------------------------------8--------------98-----99999999854776---6---
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEE
Q ss_conf 94287238953999999999869499854696489993443234741018999968524788782389999838992999
Q 000912 526 ERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVL 605 (1229)
Q Consensus 526 ~~~~y~a~spdE~ALv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmSvIv~~~~g~~~l 605 (1229)
...||.|.|+++++...+.. .. ....|++++.+||+|.||||+++++.++|+.++
T Consensus 417 -----~~~~P~e~Al~~~~~~~~~~-------------~~-------~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~ 471 (920)
T 1mhs_A 417 -----KGIDAIDKAFLKSLKYYPRA-------------KS-------VLSKYKVLQFHPFDPVSKKVVAVVESPQGERIT 471 (920)
T ss_dssp -----CSCCSHHHHHHHHHHHSSSC-------------CG-------GGSCCCEEEEEEEETTTTEEEEEECCSSSSCEE
T ss_pred -----CCCCHHHHHHHHHHHHCCCC-------------HH-------HCCCCCEEEEEECCCCCCEEEEEEEECCCCEEE
T ss_conf -----68985899999999964631-------------01-------013553357861167788599999967991899
Q ss_pred EEECCCHHHHHHHHCC---CHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9925605678985158---5457999999999996146718899999349879999999999996313449999999999
Q 000912 606 YCKGADSVIYERLANG---NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAE 682 (1229)
Q Consensus 606 ~~KGad~~I~~~l~~~---~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~ 682 (1229)
|+||||+.|+++|... ..+..+.+.+++++++.+|+|+|++|+|..
T Consensus 472 ~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~------------------------------- 520 (920)
T 1mhs_A 472 CVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG------------------------------- 520 (920)
T ss_dssp EEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS-------------------------------
T ss_pred EEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECC-------------------------------
T ss_conf 9908799999861356789878899899999999867997999998326-------------------------------
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 75117357666200344798919999999985993999927988889999998387667960899917875321112269
Q 000912 683 LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERG 762 (1229)
Q Consensus 683 ~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLTGD~~eTAi~Ia~~~gLi~~~~~~i~i~~~~~~~~~~~~~~ 762 (1229)
|.+++|+|+++++|++|++++++|+.|+++||++||+|||+..||.+||++|||..... +.+.
T Consensus 521 --e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-----~~~~---------- 583 (920)
T 1mhs_A 521 --EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY-----NAER---------- 583 (920)
T ss_dssp --SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCC-----CSSS----------
T ss_pred --CCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC-----CCCC----------
T ss_conf --65307889999734321017999999862574499983897899999999849996546-----7541----------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHH
Q ss_conf 83799877259999999999897200123358860899977503388428158999985320277339999090109999
Q 000912 763 DPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQV 842 (1229)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvidG~~l~~~l~~~l~~~f~~l~~~~~~vI~~R~sP~qKa~i 842 (1229)
++++|. ..+.++++.+ + ..+..+|||++|+||..+
T Consensus 584 -------------------------------------~~~~g~--~~~~~~el~~----~--~~~~~V~arv~P~~K~~i 618 (920)
T 1mhs_A 584 -------------------------------------LGLGGG--GDMPGSEVYD----F--VEAADGFAEVFPQHKYNV 618 (920)
T ss_dssp -------------------------------------SSSCBC--CCGGGGGGGT----T--TTTTSCEESCCSTHHHHH
T ss_pred -------------------------------------EEECCC--CCCCHHHHHH----H--HHHCEEEEEECHHHHHHH
T ss_conf -------------------------------------242276--5589899998----7--751819998379999999
Q ss_pred HHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE-CCCCHHHHHHHHHHHHHCCCCCCCE-EEEHHHHHHHHHHHHHHHH
Q ss_conf 9999833597399954895485546624700883-4861227975233755102231101-1101357999999999999
Q 000912 843 TSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYF 920 (1229)
Q Consensus 843 V~~lk~~~g~~vlaIGDG~NDv~mlq~AdVGVgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~hGr~~y~ri~~~i~y~ 920 (1229)
|+.+ ++.|++|+|+|||+||+|||++|||||++ +|++. |+.+||+++.+.++.... ++.+||+.|+|+++++.|.
T Consensus 619 V~~L-q~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~ 695 (920)
T 1mhs_A 619 VEIL-QQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDA--ARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYR 695 (920)
T ss_dssp HHHH-HTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHH--HHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCHH--HHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999-96799699982881009999857867405643399--99846807767977789999999999999999987889
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCCCCHHHHH
Q ss_conf 99999999999999875075451122469999998785556798765146678936651090414701247667879999
Q 000912 921 FYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVA 1000 (1229)
Q Consensus 921 fykni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~lg~~d~dv~~~~~~~~P~lY~~~~~~~~~~~~~f~ 1000 (1229)
++.|+.+....++...+.++ + +++.+++|.|++.+. |++++++.+.+. .+.|.-... ...+ +
T Consensus 696 l~~n~~~~~~~~~~~~~~~~---~-l~~~~il~~~l~~d~-~~lal~~e~~~~-----~~~P~~~~~---~~~~-----~ 757 (920)
T 1mhs_A 696 IALSIHLEIFLGLWIAILNR---S-LNIELVVFIAIFADV-ATLAIAYDNAPY-----SQTPVKWNL---PKLW-----G 757 (920)
T ss_dssp HHHHHHHHHHHHHHHHSCSC---C-CCHHHHHHHHHHHTT-HHHHCCCCCSGG-----GGSCCCCCS---SSCS-----S
T ss_pred HHHHHHHHHHHHHHHHHHHC---C-CCHHHHHHHHHHHHH-HHHHHCCCCCCC-----CCCCCCCHH---HHHH-----H
T ss_conf 79999999999999999961---6-879999999999877-766513567643-----458878408---9899-----9
Q ss_pred HHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHH
Q ss_conf 999999999999999987-30688778999302300001367789999999887543034----3056789988789999
Q 000912 1001 IWAFFSVYQSLVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNT----ITRFHYITVGGSILAW 1075 (1229)
Q Consensus 1001 ~~~~~~~~~s~v~f~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~----~t~~~~~~i~~si~~~ 1075 (1229)
..++.|++.++..++.+. .+... ..++.........|++|+++++..++.+. .+++ |....+..+++++++.
T Consensus 758 ~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~T~~f~~lv~~~~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~ 834 (920)
T 1mhs_A 758 MSVLLGVVLAVGTWITVTTMYAQG--ENGGIVQNFGNMDEVLFLQISLTENWLIF-ITRANGPFWSSIPSWQLSGAIFLV 834 (920)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTT--TTCCSSSSSSSHHHHHHHHHHHHHHHHTT-SSSCSSSCSCCSCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHCCCHHHHHHHHHHHH
T ss_conf 999999999999999999999835--45653320667899999999999999999-850360540375599999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999998512577888873578899881-049789999999999899999999988850
Q 000912 1076 FLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQRWF 1133 (1229)
Q Consensus 1076 ~i~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~wl~~ll~~~~~ll~~~~~k~~~r~~ 1133 (1229)
.+......+.+ +|... .++..|+.+++..++.++...+.|++.+..
T Consensus 835 ~~~~~~~~~~~------------~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 835 DILATCFTIWG------------WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp HHHHHHHHSSS------------STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHH------------HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999765------------631678899999999999999999999999998604
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=858.59 Aligned_cols=782 Identities=16% Similarity=0.174 Sum_probs=551.6
Q ss_pred CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 78778889970113887321332799999987789999999987722247----77676320145789999999999999
Q 000912 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPM----SPVNPVTNVVPLSLVLLVSLIKEAWE 127 (1229)
Q Consensus 52 ~~~~~~yg~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~----s~~~~~~~i~pl~~vl~~s~ik~~~e 127 (1229)
++|+.+||.|+++.++++.| +.|++||.+|++++++++++++++.. .+..|...+ .++++++++++.+.++
T Consensus 39 ~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~-~I~~~v~i~~~l~~~q 113 (885)
T 3b8c_A 39 EDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFV-GIICLLVINSTISFIE 113 (885)
T ss_dssp HHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHH-HHHHHTTTTTTTTTTT
T ss_pred HHHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_conf 99998519971588788799----999999999999999999999999970456630188999-9999999999999999
Q ss_pred HHHHHHHHH---HHCCCCEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEE
Q ss_conf 999853023---10486199952992999722467559299982697348528784003898708998255566333122
Q 000912 128 DWKRFQNDM---TINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKI 204 (1229)
Q Consensus 128 d~~r~~~d~---~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~vPAD~ilLsss~~~g~~~Vdts~LdGEt~~k~ 204 (1229)
++|..++.+ ++++.+++|+|+|+++++++++|+|||||.|++||.+|||++|+++++ |+||||+|||||.|+.
T Consensus 114 e~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~ 189 (885)
T 3b8c_A 114 ENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVT 189 (885)
T ss_dssp TTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCC
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEECCC----CCCCCCCCCCCCCCEE
T ss_conf 999999999973349986999999989998989979897899889999930359997675----4003444688886458
Q ss_pred ECCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECEEEECCCEEEEEEEEECCHHHHH
Q ss_conf 20121012468921112561299950799874113679985283026897753650406403770999999827313665
Q 000912 205 RKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVM 284 (1229)
Q Consensus 205 K~~~~~t~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~i~gvVv~tG~~Tk~~ 284 (1229)
|.+.+ ..|+||.+.+|. +.++|++||.+|.++
T Consensus 190 K~~g~---------------------------~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 221 (885)
T 3b8c_A 190 KHPGQ---------------------------EVFSGSTCKQGE---------------------IEAVVIATGVHTFFG 221 (885)
T ss_dssp BSSCC---------------------------CCCSCCCCCSCC---------------------CCCBCCSCTTTTTST
T ss_pred ECCCC---------------------------CCCCCEEEEEEE---------------------EEEEEEECCCCCHHH
T ss_conf 34898---------------------------302675995117---------------------999999757301999
Q ss_pred HCCC--CCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 3147--9998757899999999999999-999999999998863303541232346789986678789872569999999
Q 000912 285 MNSM--NIPSKRSTLERKLDKLILALFA-TLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNM 361 (1229)
Q Consensus 285 ~n~~--~~~~k~s~le~~~n~~~~~l~~-~~i~l~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1229)
+... ....+++++++.++++..+++. +.+.++++..+ . |++.... .. ..+
T Consensus 222 ~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~---~------~~~~~~~-----------~~-------~~~ 274 (885)
T 3b8c_A 222 KAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIV---M------YPIQRRK-----------YR-------DGI 274 (885)
T ss_dssp TCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTT---T------TTTTCSC-----------ST-------THH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---H------HHHCCCC-----------HH-------HHH
T ss_conf 9999986464468499999999999999999999999999---9------9980686-----------99-------999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEEE
Q ss_conf 99998833933325788899999997645320452222224899830024665456842379995147865557369999
Q 000912 362 FTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFK 441 (1229)
Q Consensus 362 ~~~l~l~~~~iPisL~v~i~i~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~ 441 (1229)
..++.+++.+||++||+++++...++ +..+ +++++++|+++.+|+||++++||||||||||+|+|++.+
T Consensus 275 ~~~v~llv~aiP~aLp~~vti~la~g-~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~ 343 (885)
T 3b8c_A 275 DNLLVLLIGGIPIAMPTVLSVTMAIG-SHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 343 (885)
T ss_dssp HHHHHHTTTTCCSSTTTHHHHTTTHH-HHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----------HHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEE
T ss_conf 99999999970368999999999999-9999----------719869689518889767998998799876168527998
Q ss_pred EEECCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECC
Q ss_conf 99978874688235533332104888863331000001588888985653003469999356999999971145147445
Q 000912 442 CSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEG 521 (1229)
Q Consensus 442 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~~~lalChtv~~~~ 521 (1229)
+.+. .++. + ....+++...++|+...
T Consensus 344 ~~~~--~~~~------------------------------~-------------------~~~~~ll~~aa~~~~~~--- 369 (885)
T 3b8c_A 344 NLVE--VFCK------------------------------G-------------------VEKDQVLLFAAMASRVE--- 369 (885)
T ss_dssp CCCC--SSCS------------------------------S-------------------TTHHHHHHHHHHHCCSS---
T ss_pred EEEE--CCCC------------------------------C-------------------CCHHHHHHHHHHHHCCC---
T ss_conf 7775--1589------------------------------9-------------------99999999999972788---
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCC
Q ss_conf 69999428723895399999999986949985469648999344323474101899996852478878238999983899
Q 000912 522 DESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADG 601 (1229)
Q Consensus 522 ~~~~~~~~y~a~spdE~ALv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmSvIv~~~~g 601 (1229)
.++|.|.|+++++.+.. + ....|+.++.+||+|.||||+++++..+|
T Consensus 370 ----------~~~p~~~Al~~~~~~~~--------------~---------~~~~~~~~~~~pF~s~~k~~sv~~~~~~g 416 (885)
T 3b8c_A 370 ----------NQDAIDAAMVGMLADPK--------------E---------ARAGIREVHFLPFNPVDKRTALTYIDGSG 416 (885)
T ss_dssp ----------SCCSHHHHHHHTTCCTT--------------C---------CCCSSCCBCCCCCCTTTCCCCCBBCSSSS
T ss_pred ----------CCCCHHHHHHHHHHCHH--------------H---------HHHCCCEEECCCCCCCCCEEEEEEEECCC
T ss_conf ----------99915899999864636--------------5---------76248322013578522568999980489
Q ss_pred CEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 29999925605678985158545799999999999614671889999934987999999999999631344999999999
Q 000912 602 RLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVA 681 (1229)
Q Consensus 602 ~~~l~~KGad~~I~~~l~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~ 681 (1229)
+.++|+||||+.++++|.... ...+.+.+++++++.+|+|+|++|+|++++++ .
T Consensus 417 ~~~~~~KGa~e~il~~c~~~~-~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~-------------------------~ 470 (885)
T 3b8c_A 417 NWHRVSKGAPEQILELAKASN-DLSKKVLSIIDKYAERGLRSLAVARQVVPEKT-------------------------K 470 (885)
T ss_dssp CBCBCCCCSGGGTSSSSCCCS-TTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS-------------------------S
T ss_pred CEEEEEECCHHHHHHHCCCCH-HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC-------------------------C
T ss_conf 689999488999997645864-45799999999998579869999994466433-------------------------1
Q ss_pred HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 97511735766620034479891999999998599399992798888999999838766796089991787532111226
Q 000912 682 ELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER 761 (1229)
Q Consensus 682 ~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLTGD~~eTAi~Ia~~~gLi~~~~~~i~i~~~~~~~~~~~~~ 761 (1229)
+..|+|++++|+++++|++|++++++|+.|+++||++||+|||+..||.+||+++||..+.. ...
T Consensus 471 ~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-------~~~-------- 535 (885)
T 3b8c_A 471 ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-------PSS-------- 535 (885)
T ss_dssp SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-------TTS--------
T ss_pred CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCC-------CCC--------
T ss_conf 11356757999999606661208999999997699689993998699999999809764667-------751--------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHH-HCCHHHHHHHHHHHHCCCCEEEEEECHHHHH
Q ss_conf 983799877259999999999897200123358860899977503388-4281589999853202773399990901099
Q 000912 762 GDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMY-ALDPSLRVILLNLSLNCSSVVCCRVSPLQKA 840 (1229)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvidG~~l~~-~l~~~l~~~f~~l~~~~~~vI~~R~sP~qKa 840 (1229)
++.|..++. ..+.++.+... +..+|+|++|+||.
T Consensus 536 ---------------------------------------~l~g~~~~~~~~~~~l~~~~~------~~~v~arv~P~~K~ 570 (885)
T 3b8c_A 536 ---------------------------------------ALLGTHKDANLASIPVEELIE------KADGFAGVFPEHKY 570 (885)
T ss_dssp ---------------------------------------SCCBGGGGTTSCCSCHHHHHH------TSCCEECCCHHHHH
T ss_pred ---------------------------------------EEECCCCCCCCCHHHHHHHHH------HCCEEEEECHHHHH
T ss_conf ---------------------------------------445553122246357999986------38689887899999
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEEC-CCCHHHHHHHHHHHHHCCCCCCCE-EEEHHHHHHHHHHHHHH
Q ss_conf 9999998335973999548954855466247008834-861227975233755102231101-11013579999999999
Q 000912 841 QVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVL 918 (1229)
Q Consensus 841 ~iV~~lk~~~g~~vlaIGDG~NDv~mlq~AdVGVgis-g~e~~qA~~asD~~i~~f~~l~~l-ll~hGr~~y~ri~~~i~ 918 (1229)
.+|+.+ ++.|++|+|+|||+||+|||++|||||++. |++. |+.+||+++.++++.... ++.+||+.|+|+++++.
T Consensus 571 ~iV~~l-q~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~ 647 (885)
T 3b8c_A 571 EIVKKL-QERKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 647 (885)
T ss_dssp HHHHHH-HHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHH--HGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHH-HHCCCEEEEECCCCHHHHHHHHCCEEEEECCCCHH--HHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999-97799699975981229999869975995771299--998434013357666899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCCCCHHH
Q ss_conf 99999999999999998750754511224699999987855567987651466789366510904147012476678799
Q 000912 919 YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRV 998 (1229)
Q Consensus 919 y~fykni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~lg~~d~dv~~~~~~~~P~lY~~~~~~~~~~~~~ 998 (1229)
|.+..|+...+..++..+ ++ + ..+.+++++|.|++.+..+ ++++. |+..+ .+.|. .......
T Consensus 648 ~~l~~n~~~~~~~~~~~~--~~-~-~~l~p~~il~i~l~~d~~~-l~l~~-~~~~~----~~~p~--------~~~~~~~ 709 (885)
T 3b8c_A 648 YAVSITIRIVFGFMLIAL--IW-E-FDFSAFMVLIIAILNDGTI-MTISK-DRVKP----SPTPD--------SWKLKEI 709 (885)
T ss_dssp HHHHHTTTTTSTTHHHHS--SC-S-SCSCHHHHHHHHHHHHTTT-CCCCC-CCCCC----SSCCC--------STTTTTT
T ss_pred HHHHHHHHHHHHHHHHHH--CC-C-CCCCHHHHHHHHHHHHHHH-HHHCC-CCCCC----CCCCC--------CHHHHHH
T ss_conf 999999999999999997--03-8-6758899999999987778-74046-54675----45873--------0358999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH--HHHHHH---H
Q ss_conf 999999999999999999873068877899--93---0230000136778999999988754303430--567899---8
Q 000912 999 VAIWAFFSVYQSLVLYNCVTTSSATGQNSS--GK---IFGIWDVSTMAFTCVVVTVNLRLLMMCNTIT--RFHYIT---V 1068 (1229)
Q Consensus 999 f~~~~~~~~~~s~v~f~~~~~~~~~~~~~~--g~---~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~t--~~~~~~---i 1068 (1229)
++.+++.|++.+++.+..+++.....+..+ |. ........+++|...++...+. ++.+++.+ ++.+.. +
T Consensus 710 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~Rs~~~~~~~~~~~~~~ 788 (885)
T 3b8c_A 710 FATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQAL-IFVTRSRSWSFVERPGALLM 788 (885)
T ss_dssp TTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGG-TTCSSSCTTTSTTSTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCCHHHH
T ss_conf 99999999999999999999999737652235754110229999999999999999999-99764588870118649999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87899999999998512577888873578899881-049789999999999899999999988850
Q 000912 1069 GGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQRWF 1133 (1229)
Q Consensus 1069 ~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~wl~~ll~~~~~ll~~~~~k~~~r~~ 1133 (1229)
+..++...+. ..+ ..+.. ..++.+. .++..|+.+++..++.+++..+.|++.|..
T Consensus 789 ~~~~~~~~~~----~~~-~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 844 (885)
T 3b8c_A 789 IAFLIAQLIA----TLI-AVYAN-----WEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYI 844 (885)
T ss_dssp GGGSSTTTTT----TSS-SSSCC-----CCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH----HHH-HHHCC-----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999----999-98602-----21031377609999999999999999999999999976
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=608.33 Aligned_cols=494 Identities=18% Similarity=0.222 Sum_probs=403.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCEEEEE-CCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCC
Q ss_conf 78999999999999999985302310------486199952-99299972246755929998269734852878400389
Q 000912 113 LSLVLLVSLIKEAWEDWKRFQNDMTI------NSTPVEVLQ-GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNA 185 (1229)
Q Consensus 113 l~~vl~~s~ik~~~ed~~r~~~d~~~------n~~~~~V~r-~g~~~~i~~~~l~vGDIV~v~~ge~vPAD~ilLsss~~ 185 (1229)
..+++++..+...+|++.|+++.+.+ .+.+++|+| +|+++++++++|+|||||+|++||.+|||+++++
T Consensus 191 a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 266 (736)
T 3rfu_A 191 AAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE---- 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEE----
T ss_conf 9999999999999999999999999999883399889999529989998776689898899879975156379997----
Q ss_pred CCCEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECEEEE
Q ss_conf 87089982555663331222012101246892111256129995079987411367998528302689775365040640
Q 000912 186 DGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLR 265 (1229)
Q Consensus 186 ~g~~~Vdts~LdGEt~~k~K~~~~~t~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~ 265 (1229)
|.|+||||+|||||.|+.|.+.+. .|.||++.+|.
T Consensus 267 -G~~~VDES~LTGES~Pv~K~~gd~---------------------------v~~Gt~~~~G~----------------- 301 (736)
T 3rfu_A 267 -GRSFVDESMVTGEPIPVAKEASAK---------------------------VIGATINQTGS----------------- 301 (736)
T ss_dssp -SCEEEECSSSTTCSSCEEECTTCE---------------------------ECTTCEEESCC-----------------
T ss_pred -CCEEEEECCCCCCCCCEEECCCCC---------------------------CCCCEEECCCE-----------------
T ss_conf -866765123578614278316886---------------------------77864861450-----------------
Q ss_pred CCCEEEEEEEEECCHHHH---HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 377099999982731366---53147999875789999999999999999999999999886330354123234678998
Q 000912 266 NTEYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNS 342 (1229)
Q Consensus 266 nt~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~le~~~n~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~yl~~~~~~~~ 342 (1229)
+.+.|++||.+|.+ ++....++.+++++++..|++..+++.+.++++++.++.+.++.....|
T Consensus 302 ----~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~~~---------- 367 (736)
T 3rfu_A 302 ----FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQPAL---------- 367 (736)
T ss_dssp ----CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSST----------
T ss_pred ----EEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH----------
T ss_conf ----999999841225999999999974326897999999999999999999999999999996787329----------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEE
Q ss_conf 66787898725699999999999883393332578889999999764532045222222489983002466545684237
Q 000912 343 VEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVE 422 (1229)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iPisL~v~i~i~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~v~ 422 (1229)
...+..++.+++..|||+|+++++++...+ ...+ +++++++|+++.+|+||+|+
T Consensus 368 ---------------~~~l~~ai~vlviacPcaL~la~p~a~~~~-~~~~----------a~~gilvk~~~alE~l~~v~ 421 (736)
T 3rfu_A 368 ---------------SYGLIAAVSVLIIACPCALGLATPMSIMVG-VGKG----------AQSGVLIKNAEALERMEKVN 421 (736)
T ss_dssp ---------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHH-HHHH----------HHTTEEESCHHHHHHHTSCC
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----------HHCCEEECHHHHHHHHCCCC
T ss_conf ---------------999999877487732427888899999999-9997----------51513323378999862799
Q ss_pred EEEEECCCCCCCCCEEEEEEEECCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCHH
Q ss_conf 99951478655573699999997887468823553333210488886333100000158888898565300346999935
Q 000912 423 YIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPD 502 (1229)
Q Consensus 423 ~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 502 (1229)
+||||||||||+|+|++.++...+. +
T Consensus 422 ~i~fDKTGTLT~g~~~v~~i~~~~~------~------------------------------------------------ 447 (736)
T 3rfu_A 422 TLVVDKTGTLTEGHPKLTRIVTDDF------V------------------------------------------------ 447 (736)
T ss_dssp EEEECCBTTTBCSSCEEEEEEESSS------C------------------------------------------------
T ss_pred EEEEECCCCCCCCCEEEEEEEECCC------C------------------------------------------------
T ss_conf 9998189887589527999983488------7------------------------------------------------
Q ss_pred HHHHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEE
Q ss_conf 69999999711451474456999942872389539999999998694998546964899934432347410189999685
Q 000912 503 ACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNV 582 (1229)
Q Consensus 503 ~~~~f~~~lalChtv~~~~~~~~~~~~y~a~spdE~ALv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~ 582 (1229)
..+.+...+.+ ++.++||.+.|++++++..|+.+ ...
T Consensus 448 -~~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~----------------------------~~~ 484 (736)
T 3rfu_A 448 -EDNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSL----------------------------GSV 484 (736)
T ss_dssp -HHHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCC----------------------------CCC
T ss_pred -HHHHHHHHHHH--------------HHCCCCHHHHHHHHHHHHCCCCC----------------------------CCC
T ss_conf -78999999998--------------62289928999999999659986----------------------------675
Q ss_pred ECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHH
Q ss_conf 24788782389999838992999992560567898515854579999999999961467188999993498799999999
Q 000912 583 LEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 662 (1229)
Q Consensus 583 ~~F~s~rkrmSvIv~~~~g~~~l~~KGad~~I~~~l~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~ 662 (1229)
.+|++.+++. +... .+|+ .+.+|+++.+.+.... .....+..++++.+|+|++++|+
T Consensus 485 ~~f~~~~g~g-v~~~-~~g~--~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~vl~va~-------------- 541 (736)
T 3rfu_A 485 EAFEAPTGKG-VVGQ-VDGH--HVAIGNARLMQEHGGD-----NAPLFEKADELRGKGASVMFMAV-------------- 541 (736)
T ss_dssp SCCCCCTTTE-EEEC-SSSS--CEEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTCEEEEEEE--------------
T ss_pred CCCCCCCCCE-EEEE-ECCE--EEEECCHHHHHHCCCC-----HHHHHHHHHHHHHCCCEEEEEEE--------------
T ss_conf 4320248865-8999-9998--9997389999873997-----16789999999856986999987--------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC
Q ss_conf 99996313449999999999751173576662003447989199999999859939999279888899999983876679
Q 000912 663 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 742 (1229)
Q Consensus 663 ~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLTGD~~eTAi~Ia~~~gLi~~~ 742 (1229)
|..++|+++++|++|++++++|+.|+++||++||+|||+..+|..+|+++|+.
T Consensus 542 ------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--- 594 (736)
T 3rfu_A 542 ------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK--- 594 (736)
T ss_dssp ------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC---
T ss_pred ------------------------CCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC---
T ss_conf ------------------------99899999850322030999999999879949998798989999999985998---
Q ss_pred CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHH
Q ss_conf 60899917875321112269837998772599999999998972001233588608999775033884281589999853
Q 000912 743 MKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNL 822 (1229)
Q Consensus 743 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvidG~~l~~~l~~~l~~~f~~l 822 (1229)
T Consensus 595 -------------------------------------------------------------------------------- 594 (736)
T 3rfu_A 595 -------------------------------------------------------------------------------- 594 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE-CCCCHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 202773399990901099999999833597399954895485546624700883-4861227975233755102231101
Q 000912 823 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL 901 (1229)
Q Consensus 823 ~~~~~~vI~~R~sP~qKa~iV~~lk~~~g~~vlaIGDG~NDv~mlq~AdVGVgi-sg~e~~qA~~asD~~i~~f~~l~~l 901 (1229)
.++++++|+||..+|+.+ +..++.|+|+|||.||++||++|||||++ +|.+. |+.+||+++.+.++....
T Consensus 595 ------~v~a~~~P~~K~~~v~~l-~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~--a~~~AD~vl~~~~~~~i~ 665 (736)
T 3rfu_A 595 ------KVVAEIMPEDKSRIVSEL-KDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV--AIESAGVTLLHGDLRGIA 665 (736)
T ss_dssp ------CEECSCCHHHHHHHHHHH-HHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSH--HHHHCSEEECSCCSTTHH
T ss_pred ------EEEEECCHHHHHHHHHHH-HHCCCEEEEEECCHHHHHHHHHCCEEEEECCCCHH--HHHHCCEEECCCCHHHHH
T ss_conf ------799706999999999999-96699899998985769999869977994786599--997699999269878999
Q ss_pred -EEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -110135799999999999999999999999
Q 000912 902 -LLVHGRWSYLRICKVVLYFFYKNLTFTLTQ 931 (1229)
Q Consensus 902 -ll~hGr~~y~ri~~~i~y~fykni~~~~~~ 931 (1229)
++.+||..++++++.+.|.|.+|+....+.
T Consensus 666 ~ai~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 666 KARRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=604.41 Aligned_cols=493 Identities=19% Similarity=0.235 Sum_probs=394.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HCCCCEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCC
Q ss_conf 899999999999999998530231------04861999529929997224675592999826973485287840038987
Q 000912 114 SLVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 187 (1229)
Q Consensus 114 ~~vl~~s~ik~~~ed~~r~~~d~~------~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~vPAD~ilLsss~~~g 187 (1229)
++++++..+.+.+|++.++++++. +.+.+++|+|+|+++++++++|+|||||.|++||.+|||+++++ |
T Consensus 178 ~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~-----G 252 (723)
T 3j09_A 178 VLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----G 252 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEE-----C
T ss_conf 99999999999999999999999998887269975699989989998989979998999889998856799997-----7
Q ss_pred CEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECEEEECC
Q ss_conf 08998255566333122201210124689211125612999507998741136799852830268977536504064037
Q 000912 188 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNT 267 (1229)
Q Consensus 188 ~~~Vdts~LdGEt~~k~K~~~~~t~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt 267 (1229)
.|+||||+|||||.|+.|.+.+ ..|.||++.+|.
T Consensus 253 ~~~VdeS~LTGES~pv~K~~g~---------------------------~v~~Gt~~~~g~------------------- 286 (723)
T 3j09_A 253 ESYVDESMISGEPVPVLKSKGD---------------------------EVFGATINNTGV------------------- 286 (723)
T ss_dssp CEEEECHHHHCCSSCEEECTTC---------------------------EECTTCEECSSC-------------------
T ss_pred CEEEECCCCCCCCCCEEECCCC---------------------------EECCCEEEECCC-------------------
T ss_conf 7688600013887646636898---------------------------230416970672-------------------
Q ss_pred CEEEEEEEEECCHHH---HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 709999998273136---65314799987578999999999999999999999999988633035412323467899866
Q 000912 268 EYIIGAVIFAGHETK---VMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 344 (1229)
Q Consensus 268 ~~i~gvVv~tG~~Tk---~~~n~~~~~~k~s~le~~~n~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~yl~~~~~~~~~~ 344 (1229)
+.+.|++||.+|. +++....++.+++++++.+|++..+++.+.++++++.++.+.++.. ..|
T Consensus 287 --~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~-~~~------------ 351 (723)
T 3j09_A 287 --LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH-APL------------ 351 (723)
T ss_dssp --EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTT-CTT------------
T ss_pred --EEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCH------------
T ss_conf --99999984674399999999997534698389999999999999999999999999998568-869------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEE
Q ss_conf 78789872569999999999988339333257888999999976453204522222248998300246654568423799
Q 000912 345 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 424 (1229)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~l~l~~~~iPisL~v~i~i~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~v~~I 424 (1229)
...+..++.+++..|||+|+++++++...+ ...+ +++++++|+++.+|+||++++|
T Consensus 352 -------------~~~~~~~i~vlvia~P~aL~la~p~a~~~~-~~~~----------a~~gilvk~~~~lE~lg~v~~i 407 (723)
T 3j09_A 352 -------------LFAFTTLIAVLVVACPCAFGLATPTALTVG-MGKG----------AELGILIKNADALEVAEKVTAV 407 (723)
T ss_dssp -------------CCSHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTTCEESSTTHHHHGGGCCEE
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----------HHCCEEEECHHHHHHHHCCCEE
T ss_conf -------------999999999997502678999999999999-9999----------9889389482899876249899
Q ss_pred EEECCCCCCCCCEEEEEEEECCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCHHHH
Q ss_conf 95147865557369999999788746882355333321048888633310000015888889856530034699993569
Q 000912 425 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 504 (1229)
Q Consensus 425 ~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 504 (1229)
|||||||||+|+|++.++...+. ..
T Consensus 408 ~fDKTGTLT~g~~~v~~~~~~~~-------------------------------------------------------~~ 432 (723)
T 3j09_A 408 IFDKTGTLTKGKPEVTDLVPLNG-------------------------------------------------------DE 432 (723)
T ss_dssp EEEHHHHTSCSCCEEEEEEESSS-------------------------------------------------------CH
T ss_pred EECCCCCCCCCCEEEEEEEECCC-------------------------------------------------------CH
T ss_conf 98477755269627999980799-------------------------------------------------------98
Q ss_pred HHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEEEC
Q ss_conf 99999971145147445699994287238953999999999869499854696489993443234741018999968524
Q 000912 505 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 584 (1229)
Q Consensus 505 ~~f~~~lalChtv~~~~~~~~~~~~y~a~spdE~ALv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~ 584 (1229)
.+++...+.+. +.++||++.|++++++..|+.+... ..
T Consensus 433 ~~~l~~aa~~e--------------~~s~hP~~~Ai~~~a~~~~~~~~~~--------------------~~-------- 470 (723)
T 3j09_A 433 RELLRLAAIAE--------------RRSEHPIAEAIVKKALEHGIELGEP--------------------EK-------- 470 (723)
T ss_dssp HHHHHHHHHHH--------------TTCCSHHHHHHHHHHHHTTCCCCSC--------------------CC--------
T ss_pred HHHHHHHHHHH--------------CCCCCCHHHHHHHHHHHCCCCCCCC--------------------CC--------
T ss_conf 99999999985--------------0499954289999998549985786--------------------44--------
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHH
Q ss_conf 78878238999983899299999256056789851585457999999999996146718899999349879999999999
Q 000912 585 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 664 (1229)
Q Consensus 585 F~s~rkrmSvIv~~~~g~~~l~~KGad~~I~~~l~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~ 664 (1229)
|.+...+. +.. . .+++|+++.+.+... ...+...+++++++.+|+|++++|+
T Consensus 471 ~~~~~g~g-~~~----~---~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~va~---------------- 522 (723)
T 3j09_A 471 VEVIAGEG-VVA----D---GILVGNKRLMEDFGV----AVSNEVELALEKLEREAKTAVIVAR---------------- 522 (723)
T ss_dssp CEEETTTE-EEE----T---TEEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTCEEEEEEE----------------
T ss_pred EEEECCCC-EEE----E---EEEECCHHHHHHCCC----CCCHHHHHHHHHHHHCCCEEEEEEE----------------
T ss_conf 59966981-699----9---999778999975499----8608999999999855982899978----------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCE
Q ss_conf 99631344999999999975117357666200344798919999999985993999927988889999998387667960
Q 000912 665 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 744 (1229)
Q Consensus 665 ~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLTGD~~eTAi~Ia~~~gLi~~~~~ 744 (1229)
|++++|+++++|++|++++++|+.|+++||++||+|||+..+|..+|.++|+.
T Consensus 523 ----------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----- 575 (723)
T 3j09_A 523 ----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----- 575 (723)
T ss_dssp ----------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----
T ss_pred ----------------------CCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC-----
T ss_conf ----------------------99999999606875256999999999779979999998989999999985993-----
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHH
Q ss_conf 89991787532111226983799877259999999999897200123358860899977503388428158999985320
Q 000912 745 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 824 (1229)
Q Consensus 745 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvidG~~l~~~l~~~l~~~f~~l~~ 824 (1229)
T Consensus 576 -------------------------------------------------------------------------------- 575 (723)
T 3j09_A 576 -------------------------------------------------------------------------------- 575 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE-CCCCHHHHHHHHHHHHHCCCCCCCE-E
Q ss_conf 2773399990901099999999833597399954895485546624700883-4861227975233755102231101-1
Q 000912 825 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-L 902 (1229)
Q Consensus 825 ~~~~vI~~R~sP~qKa~iV~~lk~~~g~~vlaIGDG~NDv~mlq~AdVGVgi-sg~e~~qA~~asD~~i~~f~~l~~l-l 902 (1229)
.++++++|+||+.+|+.+++. +.|+|+|||.||++||++|||||++ +|.+. |+.+||+++.+.++.... +
T Consensus 576 ----~~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~ 647 (723)
T 3j09_A 576 ----LVIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA 647 (723)
T ss_dssp ----EEECSCCTTCHHHHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECCCCSCC--SSCCSSEECSSCCTTHHHHH
T ss_pred ----EEECCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHCCEEEEECCCCHH--HHHHCCEEEECCCHHHHHHH
T ss_conf ----899268999999999998349--9399998982309999549987996787599--99869999967998899999
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 10135799999999999999999999999999875
Q 000912 903 LVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQ 937 (1229)
Q Consensus 903 l~hGr~~y~ri~~~i~y~fykni~~~~~~~~~~~~ 937 (1229)
+.+||+.++++++.+.|.|++|++..... .+.++
T Consensus 648 i~~~r~~~~~i~~nl~~a~~~n~~~i~~a-~~~~~ 681 (723)
T 3j09_A 648 IQLSRKTMSKIKQNIFWALIYNVILIPAA-AGLLY 681 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_conf 99999999999999999999999999999-97565
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=596.57 Aligned_cols=493 Identities=19% Similarity=0.243 Sum_probs=393.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCEEE
Q ss_conf 63201457899999999999999998530231------048619995299299972246755929998269734852878
Q 000912 106 PVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLF 179 (1229)
Q Consensus 106 ~~~~i~pl~~vl~~s~ik~~~ed~~r~~~d~~------~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~vPAD~il 179 (1229)
++.+.. +++++..+.+.+|++.++++++. +.+++++|+|+|+++++++++|+|||||.|++||.+|||+++
T Consensus 95 ~~~~~~---~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~v 171 (645)
T 3j08_A 95 FYETSV---LLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVV 171 (645)
T ss_dssp CCCSHH---HHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEE
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEE
T ss_conf 999999---99999999999999999999999999861799979999999799988999798999998899988668999
Q ss_pred EECCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEE
Q ss_conf 40038987089982555663331222012101246892111256129995079987411367998528302689775365
Q 000912 180 LASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILL 259 (1229)
Q Consensus 180 Lsss~~~g~~~Vdts~LdGEt~~k~K~~~~~t~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nill 259 (1229)
++ |.|+||||+|||||.|+.|++.+ ..|.||++.+|.
T Consensus 172 l~-----G~~~VdeS~LTGES~Pv~K~~g~---------------------------~v~~Gt~~~~g~----------- 208 (645)
T 3j08_A 172 VE-----GESYVDESMISGEPVPVLKSKGD---------------------------EVFGATINNTGV----------- 208 (645)
T ss_dssp EE-----CCEEEECHHHHCCSSCEEECTTC---------------------------EECTTCEECSSC-----------
T ss_pred EE-----CCEEEECCCCCCCCCCEECCCCC---------------------------EEECCEEEECCC-----------
T ss_conf 98-----86899802246998765608999---------------------------741667982572-----------
Q ss_pred ECEEEECCCEEEEEEEEECCHHH---HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 04064037709999998273136---653147999875789999999999999999999999999886330354123234
Q 000912 260 RGCSLRNTEYIIGAVIFAGHETK---VMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGL 336 (1229)
Q Consensus 260 rGs~l~nt~~i~gvVv~tG~~Tk---~~~n~~~~~~k~s~le~~~n~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~yl~~ 336 (1229)
+.+.|++||.+|. +++....++.+++++++.+|++..+++.+.++++++.++.+.++.. ..|.
T Consensus 209 ----------~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~-~~~~--- 274 (645)
T 3j08_A 209 ----------LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH-APLL--- 274 (645)
T ss_dssp ----------EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS-CSCC---
T ss_pred ----------EEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHH---
T ss_conf ----------99999972774599999999997314698589999999999999999999999999999569-8699---
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 67899866787898725699999999999883393332578889999999764532045222222489983002466545
Q 000912 337 HNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNE 416 (1229)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iPisL~v~i~i~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E 416 (1229)
..+..++.+++..|||+|+++++++...+ ...+ +++++++|+++.+|
T Consensus 275 ----------------------~~~~~~i~vlvia~P~aL~la~p~a~~~~-~~~~----------a~~gilvk~~~~lE 321 (645)
T 3j08_A 275 ----------------------FAFTTLIAVLVVACPCAFGLATPTALTVG-MGKG----------AELGILIKNADALE 321 (645)
T ss_dssp ----------------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTCCCCSSTTHHH
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----------HHCCEEECCCHHHH
T ss_conf ----------------------99999999999873668999999999999-9999----------97793766816999
Q ss_pred CCCCEEEEEEECCCCCCCCCEEEEEEEECCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCC
Q ss_conf 68423799951478655573699999997887468823553333210488886333100000158888898565300346
Q 000912 417 ELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWR 496 (1229)
Q Consensus 417 ~LG~v~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 496 (1229)
+||++++||||||||||+|+|++.++...+.
T Consensus 322 ~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------------------- 352 (645)
T 3j08_A 322 VAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------------------------------------------------- 352 (645)
T ss_dssp HGGGCCEEEEEGGGTSSSSCCEEEEEEESSS-------------------------------------------------
T ss_pred HHHCCCEEEECCCCCCCCCCEEEEEEEECCC-------------------------------------------------
T ss_conf 8627999998686665589707999981799-------------------------------------------------
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEE
Q ss_conf 99993569999999711451474456999942872389539999999998694998546964899934432347410189
Q 000912 497 NEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVC 576 (1229)
Q Consensus 497 ~~~~~~~~~~f~~~lalChtv~~~~~~~~~~~~y~a~spdE~ALv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~ 576 (1229)
...+++...+.|. +.++||++.|++++++..|+.+... .
T Consensus 353 ------~~~~~l~~aa~~e--------------~~s~hPla~Aiv~~a~~~g~~~~~~--------------------~- 391 (645)
T 3j08_A 353 ------DERELLRLAAIAE--------------RRSEHPIAEAIVKKALEHGIELGEP--------------------E- 391 (645)
T ss_dssp ------CHHHHHHHHHHHH--------------TTCCSHHHHHHHHHHHHTTCCCCSC--------------------C-
T ss_pred ------CHHHHHHHHHHHH--------------HCCCCHHHHHHHHHHHHCCCCCCCC--------------------C-
T ss_conf ------9799999999975--------------1588746799999999659986786--------------------5-
Q ss_pred EEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHH
Q ss_conf 99968524788782389999838992999992560567898515854579999999999961467188999993498799
Q 000912 577 YEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMY 656 (1229)
Q Consensus 577 ~~il~~~~F~s~rkrmSvIv~~~~g~~~l~~KGad~~I~~~l~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~ 656 (1229)
+|.+...+. +.. . .+++|+++.+.+... ...+...+++++++.+|+|++++|+
T Consensus 392 -------~~~~~~g~g-~~~----~---~v~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~l~va~-------- 444 (645)
T 3j08_A 392 -------KVEVIAGEG-VVA----D---GILVGNKRLMEDFGV----AVSNEVELALEKLEREAKTAVIVAR-------- 444 (645)
T ss_dssp -------CCEEETTTE-EEE----T---TEEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTCCCEEEEE--------
T ss_pred -------CEEEECCCC-EEE----E---EEEECCHHHHHHCCC----CCCHHHHHHHHHHHHCCCEEEEEEE--------
T ss_conf -------359965884-699----9---999887999975498----7518899999999855983899988--------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 99999999996313449999999999751173576662003447989199999999859939999279888899999983
Q 000912 657 ERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1229)
Q Consensus 657 ~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLTGD~~eTAi~Ia~~~ 736 (1229)
|++++|+++++|++|++++++|+.|+++||++||+|||+.++|..+++++
T Consensus 445 ------------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~l 494 (645)
T 3j08_A 445 ------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 494 (645)
T ss_dssp ------------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred ------------------------------CCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHC
T ss_conf ------------------------------99999999934876567999999999779979999088879999999983
Q ss_pred CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCHHHH
Q ss_conf 87667960899917875321112269837998772599999999998972001233588608999775033884281589
Q 000912 737 NLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLR 816 (1229)
Q Consensus 737 gLi~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvidG~~l~~~l~~~l~ 816 (1229)
|+.
T Consensus 495 gi~----------------------------------------------------------------------------- 497 (645)
T 3j08_A 495 NLD----------------------------------------------------------------------------- 497 (645)
T ss_dssp TCS-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
T ss_conf 997-----------------------------------------------------------------------------
Q ss_pred HHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE-CCCCHHHHHHHHHHHHHCC
Q ss_conf 999853202773399990901099999999833597399954895485546624700883-4861227975233755102
Q 000912 817 VILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQF 895 (1229)
Q Consensus 817 ~~f~~l~~~~~~vI~~R~sP~qKa~iV~~lk~~~g~~vlaIGDG~NDv~mlq~AdVGVgi-sg~e~~qA~~asD~~i~~f 895 (1229)
.++++++|+||+.+++.+++. +.|+|+|||.||++|+++||+||++ +|.+. |+.+||+++.+.
T Consensus 498 ------------~~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~ 561 (645)
T 3j08_A 498 ------------LVIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRD 561 (645)
T ss_dssp ------------EEECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSSEEEEECCCSCC--SSCCSSSEESSC
T ss_pred ------------EEEEECCHHHHHHHHHHHHHC--CEEEEEECCHHHHHHHHHCCEEEEECCCCHH--HHHHCCEEEECC
T ss_conf ------------899837877689999998609--9599996977689999759988994887599--998699999369
Q ss_pred CCCCCE-EEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 231101-110135799999999999999999999999
Q 000912 896 RFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQ 931 (1229)
Q Consensus 896 ~~l~~l-ll~hGr~~y~ri~~~i~y~fykni~~~~~~ 931 (1229)
++.... ++.+||+.++++++.+.|.|++|++.....
T Consensus 562 ~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 562 DLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9889999999999999999999999999999999999
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=204.75 Aligned_cols=136 Identities=23% Similarity=0.326 Sum_probs=111.2
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHH
Q ss_conf 73576662003447989199999999859939999279888899999983876679608999178753211122698379
Q 000912 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 766 (1229)
Q Consensus 687 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLTGD~~eTAi~Ia~~~gLi~~~~~~i~i~~~~~~~~~~~~~~~~~~ 766 (1229)
+-.+.|.+.++|++++|++++++.|++.|++++|+|||+..++..++..+||..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHH
Q ss_conf 98772599999999998972001233588608999775033884281589999853202773399990901099999999
Q 000912 767 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLV 846 (1229)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvidG~~l~~~l~~~l~~~f~~l~~~~~~vI~~R~sP~qKa~iV~~l 846 (1229)
+|+.+.|..|..+++.+
T Consensus 178 ---------------------------------------------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 178 ---------------------------------------------------------------YYSNLSPEDKVRIIEKL 194 (263)
Q ss_pred HHHCCCEEEEECCCCCCHHHHHHCCCCEEE-CCCCHHHHHHHHHHHH--HCCCCCCCEEEEHHHHHHHHHHH
Q ss_conf 833597399954895485546624700883-4861227975233755--10223110111013579999999
Q 000912 847 KKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAI--AQFRFLTDLLLVHGRWSYLRICK 915 (1229)
Q Consensus 847 k~~~g~~vlaIGDG~NDv~mlq~AdVGVgi-sg~e~~qA~~asD~~i--~~f~~l~~lll~hGr~~y~ri~~ 915 (1229)
+..+..++|||||.||++|+++|++||++ .+.+. +...+|+++ .++.-+.. ++..+|..++++.+
T Consensus 195 -~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~--~~~~ad~v~~~~~l~~l~~-~l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 195 -KQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDI--SKNVADIILVSNDIGTLLG-LIKNRKRLSNAIPS 262 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=172.14 Aligned_cols=271 Identities=23% Similarity=0.277 Sum_probs=189.2
Q ss_pred CCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCC
Q ss_conf 89983002466545684237999514786555736999999978874688235533332104888863331000001588
Q 000912 403 SNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKG 482 (1229)
Q Consensus 403 ~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1229)
+++++++|+++.+|.|++++.|+||||||||.+.+.+..+...+. +
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~---------------------------- 59 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------D---------------------------- 59 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------C----------------------------
T ss_pred HHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC------C----------------------------
T ss_conf 879979968089988536999999689988289779999981799------9----------------------------
Q ss_pred CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEE
Q ss_conf 88898565300346999935699999997114514744569999428723895399999999986949985469648999
Q 000912 483 FNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVR 562 (1229)
Q Consensus 483 ~~~~~~~l~~~~~~~~~~~~~~~~f~~~lalChtv~~~~~~~~~~~~y~a~spdE~ALv~~a~~~g~~~~~r~~~~i~i~ 562 (1229)
..+++... ..+ + ..+.+|.+.|+..+++..|+.....
T Consensus 60 ---------------------~~~~l~~~---~~~--e---------~~s~hp~~~a~~~~~~~~g~~~~~~-------- 96 (287)
T 3a1c_A 60 ---------------------ERELLRLA---AIA--E---------RRSEHPIAEAIVKKALEHGIELGEP-------- 96 (287)
T ss_dssp ---------------------HHHHHHHH---HHH--T---------TTCCSHHHHHHHHHHHHTTCCCCCC--------
T ss_pred ---------------------HHHHHHHH---HHH--H---------HCCCCHHHHHHHHHHHHCCCCCCCC--------
T ss_conf ---------------------99999999---997--5---------2179979999999998659985555--------
Q ss_pred ECCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCE
Q ss_conf 34432347410189999685247887823899998389929999925605678985158545799999999999614671
Q 000912 563 ESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLR 642 (1229)
Q Consensus 563 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmSvIv~~~~g~~~l~~KGad~~I~~~l~~~~~~~~~~~~~~l~~~a~~GlR 642 (1229)
..+.. +. . +++. . . .+.+|.++.+-+.... ..+...+..+.+...|.+
T Consensus 97 ------------~~~~~---~~----G--~~~~--~--~---~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~ 144 (287)
T 3a1c_A 97 ------------EKVEV---IA----G--EGVV--A--D---GILVGNKRLMEDFGVA----VSNEVELALEKLEREAKT 144 (287)
T ss_dssp ------------SCEEE---ET----T--TEEE--E--T---TEEEECHHHHHHTTCC----CCHHHHHHHHHHHHTTCE
T ss_pred ------------CCCEE---EC----C--CCEE--E--E---EEEECCHHHHHHCCCC----CCHHHHHHHHHHHHCCCE
T ss_conf ------------44146---24----8--8728--8--9---9998899999865997----507789999998747975
Q ss_pred EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEC
Q ss_conf 88999993498799999999999963134499999999997511735766620034479891999999998599399992
Q 000912 643 TLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLT 722 (1229)
Q Consensus 643 tL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwiLT 722 (1229)
++++++ |..+++....++++.+|+.++++.|+++|+++.++|
T Consensus 145 ~i~~~~--------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T 186 (287)
T 3a1c_A 145 AVIVAR--------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 186 (287)
T ss_dssp EEEEEE--------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEE--------------------------------------CCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 999999--------------------------------------998999999545361418999999997798599990
Q ss_pred CCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
Q ss_conf 79888899999983876679608999178753211122698379987725999999999989720012335886089997
Q 000912 723 GDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALII 802 (1229)
Q Consensus 723 GD~~eTAi~Ia~~~gLi~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 802 (1229)
|+....+..+...+|+..
T Consensus 187 ~~~~~~~~~~l~~~gl~~-------------------------------------------------------------- 204 (287)
T 3a1c_A 187 GDNWRSAEAISRELNLDL-------------------------------------------------------------- 204 (287)
T ss_dssp SSCHHHHHHHHHHHTCSE--------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHCCCE--------------------------------------------------------------
T ss_conf 989899999999809813--------------------------------------------------------------
Q ss_pred CCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEEC-CCCH
Q ss_conf 750338842815899998532027733999909010999999998335973999548954855466247008834-8612
Q 000912 803 DGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEG 881 (1229)
Q Consensus 803 dG~~l~~~l~~~l~~~f~~l~~~~~~vI~~R~sP~qKa~iV~~lk~~~g~~vlaIGDG~NDv~mlq~AdVGVgis-g~e~ 881 (1229)
.|..+.|..|...++.+. .. ..+++|||+.||+.|.+.|+++|++. +.+.
T Consensus 205 ---------------------------~f~~i~~~~K~~~~~~l~-~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~ 255 (287)
T 3a1c_A 205 ---------------------------VIAEVLPHQKSEEVKKLQ-AK-EVVAFVGDGINDAPALAQADLGIAVGSGSDV 255 (287)
T ss_dssp ---------------------------EECSCCTTCHHHHHHHHT-TT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCC
T ss_pred ---------------------------EEEECCHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHH
T ss_conf ---------------------------110058177999999982-58-8399997977789999978952996788778
Q ss_pred HHHHHHHHHHH--HCCCCCCCEEEEHHHHHHHHHH
Q ss_conf 27975233755--1022311011101357999999
Q 000912 882 MQAVMASDFAI--AQFRFLTDLLLVHGRWSYLRIC 914 (1229)
Q Consensus 882 ~qA~~asD~~i--~~f~~l~~lll~hGr~~y~ri~ 914 (1229)
+...+|+++ .++.-+.. ++..+|..+++++
T Consensus 256 --~~~~ad~v~~~~~~~~l~~-~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 256 --AVESGDIVLIRDDLRDVVA-AIQLSRKTMSKIK 287 (287)
T ss_dssp --SSCCSSEEESSSCTHHHHH-HHHTTC-------
T ss_pred --HHHHCCEEEECCCHHHHHH-HHHHHHHHHHHHC
T ss_conf --8962999994799899999-9999999998509
Done!