Query 000913
Match_columns 1226
No_of_seqs 843 out of 6361
Neff 7.6
Searched_HMMs 46136
Date Tue Apr 2 00:39:46 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000913.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000913hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 6E-215 1E-219 1960.1 80.1 1115 36-1225 12-1148(1391)
2 PLN03140 ABC transporter G fam 100.0 3E-195 6E-200 1915.6 116.7 1203 19-1225 19-1237(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 2E-154 4E-159 1535.2 109.9 1069 94-1225 3-1122(1394)
4 KOG0061 Transporter, ABC super 100.0 1.5E-83 3.3E-88 791.4 57.8 583 114-775 21-608 (613)
5 PLN03211 ABC transporter G-25; 100.0 2.1E-82 4.6E-87 789.5 64.0 609 114-775 35-658 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 1.2E-82 2.5E-87 793.3 58.8 569 162-774 35-612 (617)
7 PLN03140 ABC transporter G fam 100.0 9.4E-81 2E-85 824.7 63.0 596 110-776 859-1467(1470)
8 KOG0055 Multidrug/pheromone ex 100.0 1.9E-78 4.2E-83 752.0 46.8 841 78-1092 314-1207(1228)
9 KOG0065 Pleiotropic drug resis 100.0 1E-77 2.2E-82 742.8 31.6 560 163-775 802-1383(1391)
10 TIGR00956 3a01205 Pleiotropic 100.0 1E-74 2.2E-79 771.3 60.2 577 116-774 757-1389(1394)
11 TIGR01257 rim_protein retinal- 100.0 2.7E-72 5.8E-77 742.8 72.0 216 855-1093 1937-2154(2272)
12 KOG0054 Multidrug resistance-a 100.0 1.5E-70 3.3E-75 698.3 53.3 808 78-1093 483-1357(1381)
13 PLN03130 ABC transporter C fam 100.0 2.7E-68 5.8E-73 716.3 61.4 211 854-1093 1236-1456(1622)
14 PTZ00265 multidrug resistance 100.0 1.2E-68 2.7E-73 713.2 54.6 217 854-1093 1164-1447(1466)
15 PLN03232 ABC transporter C fam 100.0 2.1E-67 4.4E-72 708.6 61.0 211 854-1093 1233-1453(1495)
16 COG1123 ATPase components of v 100.0 2.1E-67 4.6E-72 615.8 50.3 491 118-1093 5-514 (539)
17 TIGR00957 MRP_assoc_pro multi 100.0 1.7E-64 3.7E-69 681.2 66.6 211 854-1093 1283-1503(1522)
18 PRK13549 xylose transporter AT 100.0 9.2E-66 2E-70 630.5 49.5 456 166-1094 19-490 (506)
19 PRK10762 D-ribose transporter 100.0 2E-65 4.3E-70 626.8 49.3 449 166-1095 18-481 (501)
20 PRK09700 D-allose transporter 100.0 1.8E-65 4E-70 628.8 47.7 457 166-1093 19-493 (510)
21 PRK10261 glutathione transport 100.0 7.5E-65 1.6E-69 634.0 52.8 226 855-1093 313-548 (623)
22 TIGR03269 met_CoM_red_A2 methy 100.0 1.9E-64 4E-69 621.4 52.1 217 856-1093 280-512 (520)
23 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-64 2.9E-69 619.8 49.4 452 166-1094 25-488 (510)
24 PRK15134 microcin C ABC transp 100.0 1.9E-64 4.1E-69 622.2 50.6 464 165-1093 22-510 (529)
25 TIGR02633 xylG D-xylose ABC tr 100.0 4.3E-64 9.3E-69 615.7 49.5 456 166-1093 15-487 (500)
26 PRK11288 araG L-arabinose tran 100.0 5.4E-64 1.2E-68 614.1 49.6 451 166-1096 18-483 (501)
27 TIGR01271 CFTR_protein cystic 100.0 1.4E-62 3E-67 660.6 61.8 210 854-1093 1216-1435(1490)
28 PTZ00243 ABC transporter; Prov 100.0 8.4E-62 1.8E-66 653.0 63.7 211 854-1093 1307-1528(1560)
29 PRK10982 galactose/methyl gala 100.0 1.1E-62 2.3E-67 601.6 48.8 450 165-1094 11-476 (491)
30 PRK10938 putative molybdenum t 100.0 1E-61 2.2E-66 593.3 44.4 214 855-1090 260-484 (490)
31 KOG0061 Transporter, ABC super 100.0 1.4E-62 3.1E-67 605.5 33.0 353 852-1225 22-382 (613)
32 PRK11819 putative ABC transpor 100.0 4.4E-59 9.6E-64 576.4 56.4 201 855-1092 324-527 (556)
33 COG4172 ABC-type uncharacteriz 100.0 1.2E-59 2.6E-64 516.1 45.0 470 163-1093 21-511 (534)
34 PRK15064 ABC transporter ATP-b 100.0 2.7E-59 5.8E-64 576.6 50.7 198 855-1093 319-520 (530)
35 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.1E-58 4.5E-63 570.5 57.2 201 855-1092 322-525 (552)
36 PRK10636 putative ABC transpor 100.0 3.2E-56 6.9E-61 556.7 53.7 197 855-1093 312-512 (638)
37 PRK11147 ABC transporter ATPas 100.0 4.5E-56 9.7E-61 556.8 51.7 202 855-1093 319-523 (635)
38 PRK13409 putative ATPase RIL; 100.0 1.9E-56 4.1E-61 550.5 42.5 211 855-1107 340-554 (590)
39 COG1129 MglA ABC-type sugar tr 100.0 4E-55 8.6E-60 509.7 43.0 446 164-1089 20-481 (500)
40 PLN03211 ABC transporter G-25; 100.0 1.3E-55 2.8E-60 549.6 36.1 362 852-1223 36-431 (659)
41 TIGR00955 3a01204 The Eye Pigm 100.0 7.9E-56 1.7E-60 552.3 33.8 340 879-1225 36-385 (617)
42 PLN03073 ABC transporter F fam 100.0 7.1E-54 1.5E-58 536.2 46.2 200 855-1093 508-709 (718)
43 COG0488 Uup ATPase components 100.0 6.5E-53 1.4E-57 505.2 46.2 217 165-411 16-237 (530)
44 COG3845 ABC-type uncharacteriz 100.0 9E-51 2E-55 462.0 39.6 457 164-1094 16-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 9.8E-45 2.1E-49 372.8 23.9 214 856-1093 3-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 4E-44 8.6E-49 368.3 22.3 220 164-435 14-238 (240)
47 KOG0927 Predicted transporter 100.0 5.5E-43 1.2E-47 398.7 33.0 202 854-1093 388-591 (614)
48 COG1131 CcmA ABC-type multidru 100.0 1.4E-42 3.1E-47 393.3 25.0 214 856-1093 5-221 (293)
49 COG1135 AbcC ABC-type metal io 100.0 2.3E-42 4.9E-47 372.6 22.9 224 163-437 17-246 (339)
50 COG1127 Ttg2A ABC-type transpo 100.0 2.9E-42 6.3E-47 359.9 22.5 230 855-1108 8-249 (263)
51 COG1135 AbcC ABC-type metal io 100.0 1.4E-42 3.1E-47 374.2 20.5 218 856-1093 2-226 (339)
52 COG1125 OpuBA ABC-type proline 100.0 2E-42 4.3E-47 361.7 20.7 210 164-414 13-225 (309)
53 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.1E-42 8.8E-47 370.7 22.6 217 855-1095 4-224 (254)
54 COG1120 FepC ABC-type cobalami 100.0 2.7E-42 5.8E-47 374.3 20.8 218 855-1094 2-224 (258)
55 KOG0058 Peptide exporter, ABC 100.0 1.1E-42 2.3E-47 412.3 18.4 255 78-414 431-691 (716)
56 COG1116 TauB ABC-type nitrate/ 100.0 7.4E-42 1.6E-46 363.2 21.2 204 855-1084 3-207 (248)
57 COG3839 MalK ABC-type sugar tr 100.0 8.9E-42 1.9E-46 383.9 23.0 216 167-433 18-234 (338)
58 COG1136 SalX ABC-type antimicr 100.0 1.5E-41 3.2E-46 361.6 22.8 208 857-1085 3-219 (226)
59 COG1120 FepC ABC-type cobalami 100.0 1.1E-41 2.4E-46 369.4 20.5 210 165-413 15-227 (258)
60 COG3842 PotA ABC-type spermidi 100.0 1.8E-41 3.9E-46 383.4 22.9 223 165-437 18-241 (352)
61 COG1125 OpuBA ABC-type proline 100.0 9.7E-42 2.1E-46 356.6 18.8 213 856-1093 2-220 (309)
62 COG1116 TauB ABC-type nitrate/ 100.0 4.6E-41 9.9E-46 357.2 22.2 194 165-403 16-211 (248)
63 COG3638 ABC-type phosphate/pho 100.0 2.4E-41 5.3E-46 352.1 18.3 220 855-1095 3-234 (258)
64 COG4555 NatA ABC-type Na+ tran 100.0 1.1E-41 2.3E-46 344.8 15.0 201 881-1093 15-217 (245)
65 COG1131 CcmA ABC-type multidru 100.0 1.5E-40 3.3E-45 376.7 25.7 212 164-418 17-230 (293)
66 COG1127 Ttg2A ABC-type transpo 100.0 1.1E-40 2.3E-45 348.3 22.2 209 165-414 21-235 (263)
67 COG1118 CysA ABC-type sulfate/ 100.0 6.2E-41 1.3E-45 360.4 19.6 223 164-435 14-240 (345)
68 COG1118 CysA ABC-type sulfate/ 100.0 4.8E-41 1E-45 361.2 18.4 204 880-1093 14-222 (345)
69 COG3638 ABC-type phosphate/pho 100.0 4.9E-40 1.1E-44 342.4 21.9 215 165-414 17-237 (258)
70 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 8.6E-40 1.9E-44 352.8 23.7 208 166-414 18-227 (254)
71 COG2884 FtsE Predicted ATPase 100.0 2.8E-40 6E-45 332.1 18.3 213 856-1092 2-220 (223)
72 PRK13537 nodulation ABC transp 100.0 1.4E-39 3E-44 372.5 26.4 215 854-1093 6-222 (306)
73 COG2274 SunT ABC-type bacterio 100.0 1.9E-40 4.2E-45 409.9 20.5 258 78-414 436-696 (709)
74 COG3839 MalK ABC-type sugar tr 100.0 4.5E-40 9.7E-45 370.2 21.4 214 855-1093 3-218 (338)
75 COG1117 PstB ABC-type phosphat 100.0 4.5E-40 9.8E-45 336.3 19.0 221 165-433 20-248 (253)
76 COG3842 PotA ABC-type spermidi 100.0 3.5E-40 7.6E-45 372.9 19.5 215 855-1093 5-221 (352)
77 COG1136 SalX ABC-type antimicr 100.0 1.9E-39 4.2E-44 345.4 22.1 196 165-403 18-220 (226)
78 COG1117 PstB ABC-type phosphat 100.0 1.4E-39 3.1E-44 332.7 18.6 217 855-1093 7-232 (253)
79 COG4555 NatA ABC-type Na+ tran 100.0 1.3E-39 2.8E-44 329.7 16.9 206 165-414 15-222 (245)
80 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-39 3.6E-44 372.2 20.1 229 110-414 343-574 (591)
81 TIGR02314 ABC_MetN D-methionin 100.0 8.7E-39 1.9E-43 368.7 25.9 217 856-1093 2-225 (343)
82 TIGR02314 ABC_MetN D-methionin 100.0 1.6E-38 3.5E-43 366.5 27.6 206 165-413 18-229 (343)
83 cd03261 ABC_Org_Solvent_Resist 100.0 1.1E-38 2.3E-43 353.1 24.9 213 857-1093 2-221 (235)
84 TIGR03265 PhnT2 putative 2-ami 100.0 1.7E-38 3.6E-43 369.0 27.0 205 166-413 18-223 (353)
85 PRK11432 fbpC ferric transport 100.0 2E-38 4.3E-43 367.7 27.0 205 166-413 20-225 (351)
86 PRK11650 ugpC glycerol-3-phosp 100.0 2E-38 4.4E-43 368.7 26.6 205 166-413 18-223 (356)
87 KOG0055 Multidrug/pheromone ex 100.0 3.1E-39 6.6E-44 402.9 20.5 258 78-414 951-1213(1228)
88 TIGR03258 PhnT 2-aminoethylpho 100.0 2.8E-38 6E-43 367.6 27.1 206 166-413 19-227 (362)
89 PRK13536 nodulation factor exp 100.0 3E-38 6.6E-43 365.0 27.1 215 854-1093 40-256 (340)
90 KOG0056 Heavy metal exporter H 100.0 7.9E-40 1.7E-44 364.8 13.1 257 78-414 502-761 (790)
91 PRK11650 ugpC glycerol-3-phosp 100.0 1.9E-38 4.1E-43 368.9 25.2 214 856-1093 4-219 (356)
92 TIGR03265 PhnT2 putative 2-ami 100.0 2.2E-38 4.8E-43 367.9 25.5 214 855-1093 4-219 (353)
93 COG1122 CbiO ABC-type cobalt t 100.0 1.2E-38 2.5E-43 346.5 20.9 214 856-1093 4-223 (235)
94 PRK11432 fbpC ferric transport 100.0 3.2E-38 6.9E-43 366.0 25.9 214 855-1093 6-221 (351)
95 TIGR01257 rim_protein retinal- 100.0 4.5E-36 9.8E-41 399.3 49.7 216 854-1093 927-1144(2272)
96 PRK09452 potA putrescine/sperm 100.0 4.4E-38 9.5E-43 367.1 27.0 205 166-413 28-233 (375)
97 PRK13537 nodulation ABC transp 100.0 5.3E-38 1.2E-42 359.4 27.0 205 166-414 21-227 (306)
98 TIGR03258 PhnT 2-aminoethylpho 100.0 4.3E-38 9.4E-43 365.9 25.6 214 855-1093 5-223 (362)
99 cd03259 ABC_Carb_Solutes_like 100.0 3.9E-38 8.5E-43 343.4 23.5 210 857-1091 2-213 (213)
100 TIGR01188 drrA daunorubicin re 100.0 3.3E-38 7E-43 361.5 23.7 202 880-1093 5-208 (302)
101 TIGR00960 3a0501s02 Type II (G 100.0 5.1E-38 1.1E-42 343.2 23.5 207 856-1084 2-214 (216)
102 TIGR01288 nodI ATP-binding ABC 100.0 8.4E-38 1.8E-42 358.3 25.8 214 855-1093 4-219 (303)
103 COG2884 FtsE Predicted ATPase 100.0 2.3E-38 4.9E-43 318.4 18.2 200 165-408 15-220 (223)
104 cd03261 ABC_Org_Solvent_Resist 100.0 1.1E-37 2.3E-42 345.1 25.6 206 166-413 14-225 (235)
105 PRK10851 sulfate/thiosulfate t 100.0 7.4E-38 1.6E-42 363.6 25.3 216 856-1093 3-221 (353)
106 PRK10851 sulfate/thiosulfate t 100.0 1.3E-37 2.7E-42 361.7 27.1 209 166-413 16-225 (353)
107 cd03269 ABC_putative_ATPase Th 100.0 9E-38 1.9E-42 339.8 24.1 209 857-1091 2-210 (210)
108 cd03293 ABC_NrtD_SsuB_transpor 100.0 1E-37 2.2E-42 341.8 24.4 215 857-1093 2-218 (220)
109 TIGR01186 proV glycine betaine 100.0 9.9E-38 2.1E-42 361.8 25.5 208 164-414 5-219 (363)
110 COG1124 DppF ABC-type dipeptid 100.0 7E-38 1.5E-42 329.2 21.9 205 166-414 21-231 (252)
111 COG1132 MdlB ABC-type multidru 100.0 2.6E-38 5.6E-43 393.8 22.1 255 78-414 295-552 (567)
112 PRK11174 cysteine/glutathione 100.0 4.7E-38 1E-42 393.6 24.5 255 78-414 314-572 (588)
113 cd03265 ABC_DrrA DrrA is the A 100.0 1.3E-37 2.8E-42 341.0 24.8 213 856-1093 1-216 (220)
114 COG1137 YhbG ABC-type (unclass 100.0 7E-39 1.5E-43 324.0 13.5 205 879-1093 15-223 (243)
115 COG1122 CbiO ABC-type cobalt t 100.0 6E-38 1.3E-42 341.0 21.8 207 165-414 17-228 (235)
116 PRK09452 potA putrescine/sperm 100.0 1.4E-37 2.9E-42 363.0 25.8 214 855-1093 14-229 (375)
117 PRK11607 potG putrescine trans 100.0 2.3E-37 4.9E-42 361.8 27.7 205 166-413 33-238 (377)
118 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-37 3.3E-42 344.2 25.0 215 857-1093 2-227 (236)
119 PRK11153 metN DL-methionine tr 100.0 1.6E-37 3.5E-42 360.8 25.8 217 856-1093 2-225 (343)
120 cd03301 ABC_MalK_N The N-termi 100.0 1.5E-37 3.1E-42 338.9 23.8 210 857-1091 2-213 (213)
121 COG3840 ThiQ ABC-type thiamine 100.0 2.8E-38 6.2E-43 314.6 16.2 195 887-1093 18-214 (231)
122 COG3840 ThiQ ABC-type thiamine 100.0 5.1E-38 1.1E-42 312.8 17.9 201 170-413 17-218 (231)
123 PRK11000 maltose/maltodextrin 100.0 2.9E-37 6.3E-42 361.4 27.3 205 166-413 17-222 (369)
124 cd03266 ABC_NatA_sodium_export 100.0 1.5E-37 3.3E-42 340.0 23.3 215 856-1091 2-218 (218)
125 TIGR03522 GldA_ABC_ATP gliding 100.0 2E-37 4.3E-42 354.6 25.2 212 856-1093 3-216 (301)
126 cd03218 ABC_YhbG The ABC trans 100.0 2E-37 4.2E-42 342.5 24.3 212 857-1093 2-217 (232)
127 cd03296 ABC_CysA_sulfate_impor 100.0 2.6E-37 5.7E-42 342.8 25.1 216 856-1093 3-221 (239)
128 PRK11000 maltose/maltodextrin 100.0 2.1E-37 4.5E-42 362.6 25.5 214 855-1093 3-218 (369)
129 PRK09536 btuD corrinoid ABC tr 100.0 1.7E-37 3.7E-42 364.0 24.7 218 855-1094 3-224 (402)
130 COG1124 DppF ABC-type dipeptid 100.0 8.3E-38 1.8E-42 328.7 19.6 217 855-1094 3-227 (252)
131 COG0410 LivF ABC-type branched 100.0 2.1E-37 4.5E-42 323.7 22.2 206 165-414 16-226 (237)
132 TIGR01186 proV glycine betaine 100.0 1.7E-37 3.8E-42 359.7 24.0 203 879-1093 4-214 (363)
133 cd03268 ABC_BcrA_bacitracin_re 100.0 2E-37 4.3E-42 336.6 22.9 206 857-1091 2-208 (208)
134 PRK11607 potG putrescine trans 100.0 3.6E-37 7.9E-42 360.1 26.7 214 855-1093 19-234 (377)
135 PRK11153 metN DL-methionine tr 100.0 4.8E-37 1E-41 356.8 27.5 206 165-413 18-229 (343)
136 COG2274 SunT ABC-type bacterio 100.0 2.1E-36 4.6E-41 374.2 34.8 217 849-1093 465-691 (709)
137 cd03260 ABC_PstB_phosphate_tra 100.0 2.3E-37 5E-42 340.7 23.5 213 857-1093 2-224 (227)
138 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.1E-37 4.5E-42 338.9 22.7 208 856-1084 1-216 (218)
139 cd03258 ABC_MetN_methionine_tr 100.0 3.1E-37 6.6E-42 341.1 24.0 217 856-1093 2-225 (233)
140 cd03234 ABCG_White The White s 100.0 4.4E-37 9.5E-42 338.1 25.1 221 856-1091 4-226 (226)
141 cd03256 ABC_PhnC_transporter A 100.0 2.6E-37 5.7E-42 343.4 23.6 216 857-1093 2-229 (241)
142 COG4152 ABC-type uncharacteriz 100.0 7.8E-38 1.7E-42 325.2 17.8 202 879-1093 13-214 (300)
143 PRK13536 nodulation factor exp 100.0 4.2E-37 9.1E-42 355.5 25.5 205 166-414 55-261 (340)
144 PRK09493 glnQ glutamine ABC tr 100.0 5.4E-37 1.2E-41 340.6 25.4 214 856-1093 2-220 (240)
145 cd03226 ABC_cobalt_CbiO_domain 100.0 1.9E-37 4E-42 335.9 21.0 191 881-1087 13-204 (205)
146 TIGR02673 FtsE cell division A 100.0 3.1E-37 6.7E-42 336.6 22.7 206 856-1084 2-213 (214)
147 cd03259 ABC_Carb_Solutes_like 100.0 4.7E-37 1E-41 334.9 24.0 199 166-407 14-213 (213)
148 PRK13637 cbiO cobalt transport 100.0 4.6E-37 9.9E-42 349.2 24.8 218 856-1093 3-229 (287)
149 PRK13637 cbiO cobalt transport 100.0 8.4E-37 1.8E-41 347.1 26.8 218 165-425 20-248 (287)
150 PRK11264 putative amino-acid A 100.0 7E-37 1.5E-41 341.9 25.6 214 856-1093 4-228 (250)
151 KOG0062 ATPase component of AB 100.0 1.5E-36 3.3E-41 344.4 28.3 205 852-1092 359-563 (582)
152 cd03292 ABC_FtsE_transporter F 100.0 4.7E-37 1E-41 335.2 23.1 205 857-1084 2-212 (214)
153 PRK11629 lolD lipoprotein tran 100.0 9.4E-37 2E-41 337.1 25.7 217 855-1093 5-229 (233)
154 cd03265 ABC_DrrA DrrA is the A 100.0 8.6E-37 1.9E-41 334.4 25.2 204 166-412 14-219 (220)
155 cd03296 ABC_CysA_sulfate_impor 100.0 1.1E-36 2.5E-41 337.8 26.4 209 166-413 16-225 (239)
156 cd03263 ABC_subfamily_A The AB 100.0 5.5E-37 1.2E-41 336.1 23.5 214 856-1093 1-216 (220)
157 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.9E-37 1.5E-41 340.1 24.0 213 857-1093 2-220 (242)
158 TIGR01188 drrA daunorubicin re 100.0 5.7E-37 1.2E-41 351.2 23.7 206 165-414 6-213 (302)
159 PRK13647 cbiO cobalt transport 100.0 7.8E-37 1.7E-41 345.3 24.5 215 855-1093 4-222 (274)
160 TIGR02315 ABC_phnC phosphonate 100.0 4.2E-37 9.1E-42 342.2 21.9 217 856-1093 2-230 (243)
161 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6.1E-37 1.3E-41 345.4 23.3 203 879-1093 35-245 (269)
162 cd03224 ABC_TM1139_LivF_branch 100.0 5.5E-37 1.2E-41 336.6 22.3 211 856-1093 1-216 (222)
163 TIGR01288 nodI ATP-binding ABC 100.0 1.4E-36 3.1E-41 348.1 26.4 205 166-414 18-224 (303)
164 PRK11831 putative ABC transpor 100.0 1.2E-36 2.6E-41 343.1 25.4 215 855-1093 7-228 (269)
165 PRK11248 tauB taurine transpor 100.0 1.2E-36 2.7E-41 340.0 25.1 212 856-1093 2-215 (255)
166 PRK13634 cbiO cobalt transport 100.0 8.8E-37 1.9E-41 347.4 24.2 218 856-1093 3-230 (290)
167 PRK13634 cbiO cobalt transport 100.0 1.4E-36 3.1E-41 345.7 25.8 218 165-425 20-249 (290)
168 cd03264 ABC_drug_resistance_li 100.0 1E-36 2.2E-41 331.7 23.5 208 857-1091 2-211 (211)
169 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4.4E-37 9.5E-42 390.8 24.0 253 78-414 418-673 (686)
170 cd03262 ABC_HisP_GlnQ_permease 100.0 1E-36 2.2E-41 332.3 23.4 205 857-1084 2-211 (213)
171 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-36 3.1E-41 336.5 24.9 214 166-413 14-231 (236)
172 PRK13643 cbiO cobalt transport 100.0 1.2E-36 2.6E-41 346.1 24.8 217 856-1093 2-228 (288)
173 PRK13651 cobalt transporter AT 100.0 1E-36 2.2E-41 348.1 24.4 218 856-1093 3-249 (305)
174 cd03258 ABC_MetN_methionine_tr 100.0 1.6E-36 3.6E-41 335.3 25.3 205 166-413 19-229 (233)
175 PRK13643 cbiO cobalt transport 100.0 2.2E-36 4.7E-41 343.9 26.7 224 166-433 20-255 (288)
176 cd03301 ABC_MalK_N The N-termi 100.0 1.7E-36 3.7E-41 330.5 24.8 199 166-407 14-213 (213)
177 PRK10619 histidine/lysine/argi 100.0 2.3E-36 4.9E-41 339.0 26.2 215 855-1093 5-236 (257)
178 cd03235 ABC_Metallic_Cations A 100.0 7E-37 1.5E-41 333.5 21.3 199 881-1091 12-213 (213)
179 COG4559 ABC-type hemin transpo 100.0 5.3E-37 1.2E-41 313.1 18.9 206 166-413 15-229 (259)
180 PRK10908 cell division protein 100.0 1.6E-36 3.4E-41 332.9 24.2 208 856-1087 2-215 (222)
181 cd03257 ABC_NikE_OppD_transpor 100.0 1.4E-36 3E-41 334.8 23.7 217 856-1091 2-228 (228)
182 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-36 2.5E-41 332.5 22.8 194 166-403 17-216 (216)
183 PRK10895 lipopolysaccharide AB 100.0 1.5E-36 3.3E-41 337.3 24.0 214 856-1093 4-221 (241)
184 PRK13636 cbiO cobalt transport 100.0 1.8E-36 3.8E-41 344.0 25.0 215 855-1093 5-226 (283)
185 TIGR00972 3a0107s01c2 phosphat 100.0 2.5E-36 5.3E-41 336.8 25.6 214 856-1093 2-227 (247)
186 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.5E-36 5.4E-41 330.8 25.2 201 165-410 17-219 (220)
187 PRK13631 cbiO cobalt transport 100.0 1.5E-36 3.2E-41 348.8 24.3 218 855-1093 21-260 (320)
188 cd03218 ABC_YhbG The ABC trans 100.0 2.4E-36 5.3E-41 333.7 25.1 204 166-413 14-221 (232)
189 cd03225 ABC_cobalt_CbiO_domain 100.0 1.1E-36 2.3E-41 331.5 21.9 193 881-1084 14-210 (211)
190 COG0411 LivG ABC-type branched 100.0 5.9E-37 1.3E-41 322.7 19.0 206 879-1093 15-234 (250)
191 COG4988 CydD ABC-type transpor 100.0 9.2E-37 2E-41 356.2 22.4 254 80-414 286-543 (559)
192 COG0411 LivG ABC-type branched 100.0 4.5E-37 9.7E-42 323.6 17.7 221 163-414 15-239 (250)
193 TIGR03522 GldA_ABC_ATP gliding 100.0 3.2E-36 7E-41 344.6 26.3 204 166-414 16-221 (301)
194 PRK13646 cbiO cobalt transport 100.0 1.7E-36 3.7E-41 344.6 23.9 217 856-1093 3-230 (286)
195 cd03260 ABC_PstB_phosphate_tra 100.0 1.7E-36 3.6E-41 333.9 22.9 203 166-411 14-226 (227)
196 COG4987 CydC ABC-type transpor 100.0 2.6E-37 5.7E-42 354.2 16.7 256 78-414 303-561 (573)
197 cd03224 ABC_TM1139_LivF_branch 100.0 3.1E-36 6.6E-41 330.7 24.3 202 166-413 14-220 (222)
198 cd03263 ABC_subfamily_A The AB 100.0 2.7E-36 5.8E-41 330.6 23.8 203 165-412 15-219 (220)
199 TIGR02211 LolD_lipo_ex lipopro 100.0 2.7E-36 5.9E-41 330.8 23.8 211 856-1088 2-220 (221)
200 COG0410 LivF ABC-type branched 100.0 1.4E-36 3.1E-41 317.4 20.4 212 856-1093 4-221 (237)
201 PRK13650 cbiO cobalt transport 100.0 2E-36 4.4E-41 342.7 23.4 216 855-1093 4-224 (279)
202 KOG0058 Peptide exporter, ABC 100.0 2.4E-37 5.3E-42 366.8 16.5 222 846-1092 455-685 (716)
203 PRK11247 ssuB aliphatic sulfon 100.0 2.2E-36 4.8E-41 337.5 23.3 206 855-1093 12-218 (257)
204 PRK13650 cbiO cobalt transport 100.0 5E-36 1.1E-40 339.6 26.5 215 166-424 21-242 (279)
205 TIGR03740 galliderm_ABC gallid 100.0 4.1E-36 8.8E-41 329.8 24.6 208 857-1094 2-209 (223)
206 PRK11614 livF leucine/isoleuci 100.0 2.2E-36 4.7E-41 335.2 22.6 212 855-1093 5-221 (237)
207 PRK11831 putative ABC transpor 100.0 6.6E-36 1.4E-40 337.1 26.9 206 166-413 21-232 (269)
208 cd03256 ABC_PhnC_transporter A 100.0 4E-36 8.6E-41 334.0 24.7 214 165-413 14-233 (241)
209 PRK13647 cbiO cobalt transport 100.0 6.5E-36 1.4E-40 337.8 26.8 203 166-412 19-225 (274)
210 cd03269 ABC_putative_ATPase Th 100.0 3.4E-36 7.5E-41 327.3 23.7 197 166-407 14-210 (210)
211 PRK11124 artP arginine transpo 100.0 4.5E-36 9.8E-41 333.6 25.1 213 856-1093 3-225 (242)
212 TIGR03005 ectoine_ehuA ectoine 100.0 4.2E-36 9.1E-41 335.9 25.0 214 856-1093 1-231 (252)
213 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.1E-36 1.1E-40 331.9 25.4 212 856-1093 2-216 (236)
214 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.1E-36 1.1E-40 333.2 25.5 205 166-413 15-224 (242)
215 TIGR03375 type_I_sec_LssB type 100.0 1.1E-36 2.3E-41 387.8 22.8 258 78-414 428-688 (694)
216 PRK15079 oligopeptide ABC tran 100.0 4.3E-36 9.3E-41 346.2 25.6 229 855-1093 8-246 (331)
217 PRK13641 cbiO cobalt transport 100.0 3.5E-36 7.7E-41 342.2 24.5 218 856-1093 3-229 (287)
218 PRK11160 cysteine/glutathione 100.0 1.4E-36 3E-41 377.8 22.9 256 78-414 304-562 (574)
219 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.8E-36 6E-41 330.0 22.5 195 165-403 17-218 (218)
220 PRK13644 cbiO cobalt transport 100.0 3.1E-36 6.6E-41 340.4 23.4 213 856-1093 2-219 (274)
221 PRK14247 phosphate ABC transpo 100.0 7.9E-36 1.7E-40 333.4 26.4 216 856-1093 4-229 (250)
222 COG4618 ArpD ABC-type protease 100.0 9.3E-37 2E-41 346.1 19.0 256 80-416 304-562 (580)
223 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.4E-36 1.2E-40 337.7 25.0 208 163-413 35-249 (269)
224 PRK11629 lolD lipoprotein tran 100.0 8.9E-36 1.9E-40 329.3 26.2 201 165-409 22-229 (233)
225 PRK13631 cbiO cobalt transport 100.0 6E-36 1.3E-40 343.7 25.8 217 165-425 39-279 (320)
226 PRK09536 btuD corrinoid ABC tr 100.0 5.6E-36 1.2E-40 351.2 26.0 208 166-413 17-227 (402)
227 PRK13652 cbiO cobalt transport 100.0 5.1E-36 1.1E-40 339.3 24.8 214 856-1093 4-222 (277)
228 PRK13548 hmuV hemin importer A 100.0 5.2E-36 1.1E-40 335.9 24.5 213 856-1093 3-225 (258)
229 TIGR01978 sufC FeS assembly AT 100.0 7.1E-36 1.5E-40 332.4 25.4 219 856-1093 1-229 (243)
230 PRK13651 cobalt transporter AT 100.0 5.3E-36 1.1E-40 342.2 24.9 205 165-413 20-253 (305)
231 COG1137 YhbG ABC-type (unclass 100.0 3.2E-37 7E-42 312.0 13.1 210 163-414 15-228 (243)
232 PRK14273 phosphate ABC transpo 100.0 7.7E-36 1.7E-40 334.2 25.7 215 855-1093 7-233 (254)
233 PRK11300 livG leucine/isoleuci 100.0 5.1E-36 1.1E-40 336.0 24.3 217 855-1093 5-238 (255)
234 PRK14267 phosphate ABC transpo 100.0 8.2E-36 1.8E-40 333.8 25.9 217 855-1093 4-232 (253)
235 PRK15079 oligopeptide ABC tran 100.0 8.3E-36 1.8E-40 343.8 26.4 208 165-413 34-250 (331)
236 PRK10790 putative multidrug tr 100.0 4.3E-36 9.2E-41 376.0 26.1 253 78-414 308-563 (592)
237 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.3E-36 2.9E-41 388.1 21.9 261 78-414 436-700 (710)
238 PRK11176 lipid transporter ATP 100.0 1.8E-36 3.9E-41 379.1 22.6 257 78-414 308-567 (582)
239 TIGR02315 ABC_phnC phosphonate 100.0 4.2E-36 9.1E-41 334.2 23.1 212 166-412 16-233 (243)
240 TIGR01193 bacteriocin_ABC ABC- 100.0 1.3E-36 2.8E-41 387.8 21.7 257 78-414 438-697 (708)
241 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.3E-35 2.8E-40 328.6 26.6 205 166-414 15-221 (236)
242 PRK13646 cbiO cobalt transport 100.0 7.8E-36 1.7E-40 339.2 25.4 206 165-413 20-234 (286)
243 TIGR03411 urea_trans_UrtD urea 100.0 7.1E-36 1.5E-40 332.1 24.4 215 856-1093 3-226 (242)
244 cd03268 ABC_BcrA_bacitracin_re 100.0 6.6E-36 1.4E-40 324.6 23.5 194 166-407 14-208 (208)
245 PRK14268 phosphate ABC transpo 100.0 1E-35 2.2E-40 333.8 25.7 214 855-1093 12-237 (258)
246 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.8E-36 1E-40 326.4 22.3 208 857-1091 2-211 (211)
247 cd03266 ABC_NatA_sodium_export 100.0 7.2E-36 1.5E-40 326.8 23.7 198 166-407 19-218 (218)
248 PRK13635 cbiO cobalt transport 100.0 5.5E-36 1.2E-40 339.0 23.5 215 855-1093 5-224 (279)
249 PRK11231 fecE iron-dicitrate t 100.0 6.8E-36 1.5E-40 334.7 23.8 216 856-1094 3-223 (255)
250 cd03233 ABC_PDR_domain1 The pl 100.0 7.9E-36 1.7E-40 322.0 23.5 195 118-407 3-202 (202)
251 PRK09473 oppD oligopeptide tra 100.0 1.4E-35 3E-40 342.2 27.0 213 165-413 29-250 (330)
252 TIGR00958 3a01208 Conjugate Tr 100.0 1.7E-36 3.7E-41 385.2 21.3 256 78-414 444-702 (711)
253 PRK09493 glnQ glutamine ABC tr 100.0 1.3E-35 2.8E-40 329.5 25.7 204 166-413 15-224 (240)
254 PRK13638 cbiO cobalt transport 100.0 7E-36 1.5E-40 337.4 23.9 213 856-1093 2-220 (271)
255 PRK13635 cbiO cobalt transport 100.0 1.1E-35 2.5E-40 336.4 25.5 215 166-424 21-242 (279)
256 COG4559 ABC-type hemin transpo 100.0 3.1E-36 6.8E-41 307.4 18.7 216 856-1094 2-226 (259)
257 PTZ00265 multidrug resistance 100.0 1.6E-36 3.5E-41 405.6 21.7 263 78-414 1126-1452(1466)
258 PRK11264 putative amino-acid A 100.0 1.6E-35 3.5E-40 330.9 26.2 204 166-413 17-232 (250)
259 PRK10253 iron-enterobactin tra 100.0 8.6E-36 1.9E-40 335.6 24.1 218 855-1094 7-229 (265)
260 PRK10575 iron-hydroxamate tran 100.0 9.5E-36 2.1E-40 335.2 24.4 217 855-1093 11-232 (265)
261 cd03234 ABCG_White The White s 100.0 9.9E-36 2.1E-40 327.4 23.9 203 165-407 20-226 (226)
262 PRK14245 phosphate ABC transpo 100.0 1.7E-35 3.6E-40 330.6 25.9 219 855-1093 3-229 (250)
263 PRK14242 phosphate transporter 100.0 1.6E-35 3.4E-40 331.5 25.7 220 854-1093 5-232 (253)
264 PRK10070 glycine betaine trans 100.0 6.5E-36 1.4E-40 350.4 23.5 202 880-1093 40-249 (400)
265 PRK10070 glycine betaine trans 100.0 1E-35 2.3E-40 348.7 25.2 206 165-413 41-253 (400)
266 PRK14241 phosphate transporter 100.0 1.6E-35 3.4E-40 332.3 25.7 217 855-1093 4-237 (258)
267 PRK13639 cbiO cobalt transport 100.0 1.2E-35 2.6E-40 336.0 24.8 214 856-1093 2-221 (275)
268 cd03264 ABC_drug_resistance_li 100.0 9.5E-36 2.1E-40 324.1 23.0 196 166-407 14-211 (211)
269 TIGR02769 nickel_nikE nickel i 100.0 1.3E-35 2.9E-40 334.0 25.0 223 856-1093 3-235 (265)
270 PRK13649 cbiO cobalt transport 100.0 1.2E-35 2.5E-40 337.4 24.6 217 856-1093 3-229 (280)
271 cd03226 ABC_cobalt_CbiO_domain 100.0 6.4E-36 1.4E-40 323.9 21.4 191 166-404 14-205 (205)
272 PRK10584 putative ABC transpor 100.0 1.7E-35 3.7E-40 326.1 25.1 213 855-1089 6-226 (228)
273 PRK10744 pstB phosphate transp 100.0 1.7E-35 3.6E-40 332.5 25.4 220 850-1093 8-239 (260)
274 COG4525 TauB ABC-type taurine 100.0 5.1E-36 1.1E-40 301.3 18.7 200 882-1094 19-220 (259)
275 TIGR03873 F420-0_ABC_ATP propo 100.0 1.1E-35 2.4E-40 333.3 23.6 216 856-1093 2-221 (256)
276 PRK13636 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 335.6 25.5 206 166-414 20-231 (283)
277 PRK09984 phosphonate/organopho 100.0 1.4E-35 3E-40 333.5 24.2 220 855-1094 4-238 (262)
278 TIGR03410 urea_trans_UrtE urea 100.0 1.2E-35 2.5E-40 327.8 22.9 211 856-1094 1-217 (230)
279 cd03233 ABC_PDR_domain1 The pl 100.0 1.5E-35 3.4E-40 319.7 23.4 196 855-1091 3-202 (202)
280 PRK11247 ssuB aliphatic sulfon 100.0 1.5E-35 3.3E-40 330.8 24.0 194 166-410 26-219 (257)
281 TIGR03415 ABC_choXWV_ATP choli 100.0 1.5E-35 3.3E-40 344.9 24.9 208 163-413 35-253 (382)
282 PRK11248 tauB taurine transpor 100.0 2.5E-35 5.4E-40 329.5 25.8 200 166-410 15-216 (255)
283 cd03232 ABC_PDR_domain2 The pl 100.0 1.5E-35 3.2E-40 317.4 22.8 190 855-1091 3-192 (192)
284 PRK11308 dppF dipeptide transp 100.0 2.4E-35 5.2E-40 339.8 26.2 225 855-1093 5-239 (327)
285 cd03300 ABC_PotA_N PotA is an 100.0 2.1E-35 4.6E-40 326.0 24.7 212 857-1093 2-215 (232)
286 TIGR03415 ABC_choXWV_ATP choli 100.0 1.3E-35 2.8E-40 345.5 24.1 203 879-1093 35-249 (382)
287 cd03257 ABC_NikE_OppD_transpor 100.0 2.5E-35 5.5E-40 324.8 25.0 201 166-407 19-228 (228)
288 TIGR03410 urea_trans_UrtE urea 100.0 1.9E-35 4.1E-40 326.1 24.0 201 166-412 14-219 (230)
289 PRK13632 cbiO cobalt transport 100.0 1.8E-35 3.9E-40 333.9 24.1 215 855-1093 7-226 (271)
290 TIGR01184 ntrCD nitrate transp 100.0 9.6E-36 2.1E-40 328.1 21.2 198 884-1093 1-199 (230)
291 PRK10895 lipopolysaccharide AB 100.0 2.4E-35 5.1E-40 327.7 24.6 205 166-413 17-225 (241)
292 COG4175 ProV ABC-type proline/ 100.0 4.1E-36 8.9E-41 322.9 17.7 221 165-436 41-268 (386)
293 PRK11022 dppD dipeptide transp 100.0 3.1E-35 6.7E-40 339.0 26.4 213 165-413 20-242 (326)
294 PRK14237 phosphate transporter 100.0 4E-35 8.6E-40 330.4 26.7 225 849-1093 14-246 (267)
295 COG0444 DppD ABC-type dipeptid 100.0 3.6E-35 7.9E-40 322.5 25.4 215 164-413 17-242 (316)
296 PRK14235 phosphate transporter 100.0 3E-35 6.5E-40 331.4 25.5 216 855-1093 19-246 (267)
297 PRK11614 livF leucine/isoleuci 100.0 2.3E-35 5.1E-40 326.9 24.1 202 166-413 19-225 (237)
298 PRK11022 dppD dipeptide transp 100.0 3.7E-35 8.1E-40 338.4 26.6 220 856-1093 4-238 (326)
299 PRK11308 dppF dipeptide transp 100.0 3.7E-35 8.1E-40 338.2 26.5 208 165-414 28-244 (327)
300 TIGR00972 3a0107s01c2 phosphat 100.0 4.3E-35 9.4E-40 326.7 26.2 206 166-413 15-231 (247)
301 TIGR03005 ectoine_ehuA ectoine 100.0 3.1E-35 6.7E-40 328.9 25.0 205 166-413 14-235 (252)
302 TIGR02211 LolD_lipo_ex lipopro 100.0 2.7E-35 5.8E-40 322.9 24.0 196 165-404 18-220 (221)
303 cd03267 ABC_NatA_like Similar 100.0 3E-35 6.4E-40 325.5 24.5 233 119-407 1-236 (236)
304 PRK13547 hmuV hemin importer A 100.0 2.2E-35 4.7E-40 332.3 23.8 218 856-1093 2-239 (272)
305 cd03292 ABC_FtsE_transporter F 100.0 2E-35 4.4E-40 322.2 22.9 194 166-403 15-214 (214)
306 TIGR01277 thiQ thiamine ABC tr 100.0 1.8E-35 3.9E-40 322.3 22.4 198 883-1092 13-212 (213)
307 PRK13633 cobalt transporter AT 100.0 1.9E-35 4.2E-40 335.1 23.5 219 855-1093 4-228 (280)
308 PRK13648 cbiO cobalt transport 100.0 2.8E-35 6E-40 332.2 24.6 216 855-1094 7-227 (269)
309 PRK13549 xylose transporter AT 100.0 1.6E-35 3.5E-40 363.3 24.6 221 855-1095 5-229 (506)
310 TIGR03608 L_ocin_972_ABC putat 100.0 1.9E-35 4.1E-40 320.6 22.2 189 881-1081 11-206 (206)
311 PRK09473 oppD oligopeptide tra 100.0 3.6E-35 7.9E-40 338.7 25.9 224 855-1093 12-246 (330)
312 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.1E-34 6.6E-39 364.8 37.0 209 854-1093 450-668 (686)
313 PRK14269 phosphate ABC transpo 100.0 3.2E-35 7E-40 327.5 24.6 219 856-1093 3-225 (246)
314 PRK14250 phosphate ABC transpo 100.0 2.1E-35 4.5E-40 327.9 22.9 209 855-1093 3-216 (241)
315 PRK13641 cbiO cobalt transport 100.0 3E-35 6.5E-40 334.6 24.5 205 165-413 20-233 (287)
316 cd03267 ABC_NatA_like Similar 100.0 2.5E-35 5.4E-40 326.1 23.3 201 879-1091 32-236 (236)
317 TIGR02673 FtsE cell division A 100.0 2.8E-35 6E-40 321.2 23.3 193 166-402 16-214 (214)
318 PRK13645 cbiO cobalt transport 100.0 2.3E-35 4.9E-40 336.2 23.6 219 855-1093 6-235 (289)
319 PRK13632 cbiO cobalt transport 100.0 3.4E-35 7.4E-40 331.7 24.6 204 166-413 23-230 (271)
320 TIGR00968 3a0106s01 sulfate AB 100.0 3.5E-35 7.5E-40 325.3 24.1 212 857-1093 2-215 (237)
321 PRK13640 cbiO cobalt transport 100.0 2.4E-35 5.2E-40 334.5 23.3 217 855-1093 5-227 (282)
322 PRK13548 hmuV hemin importer A 100.0 4.6E-35 1E-39 328.2 25.3 205 166-413 16-229 (258)
323 PRK14259 phosphate ABC transpo 100.0 4.1E-35 8.9E-40 330.5 24.9 215 854-1093 12-248 (269)
324 PRK14256 phosphate ABC transpo 100.0 5.7E-35 1.2E-39 326.8 25.8 220 855-1093 4-231 (252)
325 PRK15093 antimicrobial peptide 100.0 5.1E-35 1.1E-39 338.3 26.1 223 855-1093 3-243 (330)
326 COG4181 Predicted ABC-type tra 100.0 9.6E-36 2.1E-40 293.4 16.9 211 856-1088 7-225 (228)
327 PRK13649 cbiO cobalt transport 100.0 8.1E-35 1.8E-39 330.5 27.2 204 166-413 21-233 (280)
328 PRK14273 phosphate ABC transpo 100.0 6.2E-35 1.3E-39 326.9 25.9 206 166-413 21-237 (254)
329 PRK13633 cobalt transporter AT 100.0 4.9E-35 1.1E-39 331.8 25.3 205 165-413 23-232 (280)
330 PRK13652 cbiO cobalt transport 100.0 5.8E-35 1.3E-39 330.7 25.8 205 166-413 18-226 (277)
331 PRK11300 livG leucine/isoleuci 100.0 6.5E-35 1.4E-39 327.0 25.9 220 166-413 19-242 (255)
332 PRK13648 cbiO cobalt transport 100.0 6.1E-35 1.3E-39 329.4 25.6 215 166-424 23-244 (269)
333 PRK13644 cbiO cobalt transport 100.0 4.4E-35 9.5E-40 331.0 24.4 203 166-413 16-223 (274)
334 TIGR03411 urea_trans_UrtD urea 100.0 7.1E-35 1.5E-39 324.1 25.6 210 166-412 16-229 (242)
335 PRK15112 antimicrobial peptide 100.0 3.7E-35 8E-40 330.7 23.5 224 855-1093 4-234 (267)
336 PRK10619 histidine/lysine/argi 100.0 6.8E-35 1.5E-39 327.0 25.5 204 166-413 19-240 (257)
337 cd03297 ABC_ModC_molybdenum_tr 100.0 4.2E-35 9.2E-40 319.7 23.2 191 886-1091 16-214 (214)
338 cd03299 ABC_ModC_like Archeal 100.0 5.4E-35 1.2E-39 323.3 24.3 199 883-1093 14-214 (235)
339 TIGR02769 nickel_nikE nickel i 100.0 7.2E-35 1.6E-39 328.1 25.7 206 165-413 24-239 (265)
340 PRK14274 phosphate ABC transpo 100.0 7.3E-35 1.6E-39 327.2 25.5 219 855-1093 12-238 (259)
341 PRK14268 phosphate ABC transpo 100.0 1E-34 2.2E-39 325.7 26.7 205 166-413 26-241 (258)
342 TIGR01842 type_I_sec_PrtD type 100.0 2.6E-35 5.6E-40 364.9 24.0 256 78-414 284-542 (544)
343 PRK14250 phosphate ABC transpo 100.0 6.6E-35 1.4E-39 323.9 24.7 200 166-413 17-220 (241)
344 PRK14239 phosphate transporter 100.0 7.4E-35 1.6E-39 326.0 25.3 215 855-1093 5-231 (252)
345 PRK14270 phosphate ABC transpo 100.0 7.8E-35 1.7E-39 325.4 25.4 215 855-1093 4-230 (251)
346 PRK10771 thiQ thiamine transpo 100.0 3.7E-35 8E-40 324.2 22.4 211 856-1093 2-214 (232)
347 PRK10908 cell division protein 100.0 6.8E-35 1.5E-39 319.9 24.4 195 166-404 16-216 (222)
348 TIGR02142 modC_ABC molybdenum 100.0 4E-35 8.8E-40 342.4 24.0 194 886-1093 15-216 (354)
349 PRK11124 artP arginine transpo 100.0 6.4E-35 1.4E-39 324.4 24.3 203 166-412 16-228 (242)
350 PRK14240 phosphate transporter 100.0 8.5E-35 1.8E-39 325.1 25.4 215 855-1093 3-229 (250)
351 cd03213 ABCG_EPDR ABCG transpo 100.0 6E-35 1.3E-39 313.1 23.1 190 855-1091 3-194 (194)
352 COG5265 ATM1 ABC-type transpor 100.0 3.7E-36 8E-41 334.1 14.0 255 80-414 228-486 (497)
353 PRK11144 modC molybdate transp 100.0 4.5E-35 9.7E-40 341.5 23.9 190 886-1093 16-213 (352)
354 PRK13639 cbiO cobalt transport 100.0 1.4E-34 3.1E-39 327.1 27.3 204 166-413 16-225 (275)
355 cd03300 ABC_PotA_N PotA is an 100.0 1.2E-34 2.6E-39 320.0 26.1 205 166-413 14-219 (232)
356 PRK10584 putative ABC transpor 100.0 9.5E-35 2.1E-39 320.1 25.1 197 166-406 24-227 (228)
357 PRK13638 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 327.6 26.2 204 166-413 15-224 (271)
358 PRK13640 cbiO cobalt transport 100.0 9E-35 2E-39 329.8 25.5 207 166-413 21-231 (282)
359 PRK14244 phosphate ABC transpo 100.0 8.3E-35 1.8E-39 325.2 24.8 218 857-1093 7-232 (251)
360 PRK14262 phosphate ABC transpo 100.0 9.7E-35 2.1E-39 324.6 25.3 218 856-1093 4-229 (250)
361 PRK14247 phosphate ABC transpo 100.0 1.2E-34 2.6E-39 323.9 26.0 212 166-413 17-233 (250)
362 PRK14257 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 334.4 26.2 210 166-413 96-312 (329)
363 TIGR01978 sufC FeS assembly AT 100.0 9.2E-35 2E-39 323.4 24.6 212 166-413 14-233 (243)
364 PRK14260 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 325.8 25.1 216 855-1093 7-238 (259)
365 TIGR02982 heterocyst_DevA ABC 100.0 7.4E-35 1.6E-39 319.1 23.3 211 856-1087 2-219 (220)
366 TIGR01193 bacteriocin_ABC ABC- 100.0 1E-33 2.3E-38 361.2 37.5 211 854-1093 472-692 (708)
367 PRK13642 cbiO cobalt transport 100.0 7.2E-35 1.6E-39 329.9 23.9 216 855-1093 4-224 (277)
368 COG4988 CydD ABC-type transpor 100.0 1.9E-35 4.2E-40 345.1 19.6 213 852-1093 317-538 (559)
369 PRK14258 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 325.3 25.7 221 855-1093 7-240 (261)
370 TIGR03740 galliderm_ABC gallid 100.0 1.1E-34 2.5E-39 318.3 24.7 196 166-410 14-209 (223)
371 TIGR01846 type_I_sec_HlyB type 100.0 2.6E-35 5.7E-40 374.8 22.5 257 78-414 421-680 (694)
372 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.4E-35 1.8E-39 316.7 23.3 195 170-407 16-211 (211)
373 PRK14253 phosphate ABC transpo 100.0 1.3E-34 2.9E-39 323.3 25.4 219 855-1093 3-228 (249)
374 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.3E-33 5E-38 358.4 40.2 210 854-1093 476-695 (710)
375 KOG0057 Mitochondrial Fe/S clu 100.0 1.9E-35 4.1E-40 339.0 18.7 212 852-1093 348-569 (591)
376 PRK14236 phosphate transporter 100.0 1.5E-34 3.3E-39 326.5 26.0 217 853-1093 23-251 (272)
377 PRK13645 cbiO cobalt transport 100.0 1E-34 2.2E-39 330.9 24.7 205 166-413 25-239 (289)
378 PRK10762 D-ribose transporter 100.0 6.4E-35 1.4E-39 357.6 24.7 218 856-1095 5-227 (501)
379 PRK14267 phosphate ABC transpo 100.0 1.6E-34 3.5E-39 323.4 25.7 212 166-413 18-236 (253)
380 PRK10575 iron-hydroxamate tran 100.0 1.1E-34 2.5E-39 326.5 24.7 209 166-413 25-236 (265)
381 PRK10253 iron-enterobactin tra 100.0 1.2E-34 2.6E-39 326.3 24.8 208 166-413 21-232 (265)
382 PRK14242 phosphate transporter 100.0 1.9E-34 4.1E-39 322.8 26.3 207 166-413 20-236 (253)
383 COG4525 TauB ABC-type taurine 100.0 6.3E-35 1.4E-39 293.5 20.0 206 165-415 18-225 (259)
384 PRK10789 putative multidrug tr 100.0 3.7E-35 8E-40 365.0 22.7 256 78-414 280-538 (569)
385 TIGR02770 nickel_nikD nickel i 100.0 6.1E-35 1.3E-39 321.9 21.8 201 883-1093 1-210 (230)
386 cd03299 ABC_ModC_like Archeal 100.0 1.8E-34 3.8E-39 319.2 25.3 204 167-413 14-218 (235)
387 PRK14272 phosphate ABC transpo 100.0 2.1E-34 4.6E-39 322.3 26.2 216 855-1093 4-231 (252)
388 PRK09700 D-allose transporter 100.0 6.3E-35 1.4E-39 358.7 24.1 218 855-1094 5-230 (510)
389 PRK14257 phosphate ABC transpo 100.0 1.6E-34 3.6E-39 332.8 26.0 222 854-1093 79-308 (329)
390 PRK10771 thiQ thiamine transpo 100.0 1.4E-34 3E-39 319.6 24.3 201 170-413 17-218 (232)
391 PRK15093 antimicrobial peptide 100.0 1.8E-34 4E-39 333.7 26.4 217 165-413 20-247 (330)
392 PRK10418 nikD nickel transport 100.0 1.4E-34 3.1E-39 323.8 24.7 214 854-1093 3-225 (254)
393 cd03225 ABC_cobalt_CbiO_domain 100.0 8E-35 1.7E-39 316.8 22.0 194 165-402 14-211 (211)
394 PRK11701 phnK phosphonate C-P 100.0 1.3E-34 2.9E-39 324.9 24.3 215 855-1093 6-236 (258)
395 PRK11231 fecE iron-dicitrate t 100.0 1.2E-34 2.6E-39 324.6 24.0 208 166-413 16-226 (255)
396 PRK14249 phosphate ABC transpo 100.0 1.7E-34 3.8E-39 322.7 25.1 219 855-1093 4-230 (251)
397 TIGR00968 3a0106s01 sulfate AB 100.0 2.3E-34 4.9E-39 318.8 25.6 205 166-413 14-219 (237)
398 PRK11144 modC molybdate transp 100.0 7.9E-35 1.7E-39 339.5 22.9 195 170-413 16-217 (352)
399 PRK13543 cytochrome c biogenes 100.0 1.2E-34 2.7E-39 315.8 23.0 201 855-1082 11-211 (214)
400 PRK09984 phosphonate/organopho 100.0 1.5E-34 3.2E-39 325.3 24.3 215 166-412 18-240 (262)
401 TIGR03873 F420-0_ABC_ATP propo 100.0 1.7E-34 3.6E-39 323.7 24.6 207 166-412 15-224 (256)
402 TIGR02203 MsbA_lipidA lipid A 100.0 4.1E-35 8.8E-40 366.3 21.9 257 78-414 297-556 (571)
403 PRK13657 cyclic beta-1,2-gluca 100.0 7.1E-35 1.5E-39 364.6 24.1 223 117-414 333-558 (588)
404 PRK13538 cytochrome c biogenes 100.0 9.6E-35 2.1E-39 314.4 21.8 199 856-1081 2-202 (204)
405 PRK10744 pstB phosphate transp 100.0 2.5E-34 5.4E-39 322.9 25.8 229 113-413 8-243 (260)
406 PRK14263 phosphate ABC transpo 100.0 2.4E-34 5.1E-39 322.7 25.5 219 854-1093 7-240 (261)
407 PRK14235 phosphate transporter 100.0 3.2E-34 7E-39 323.0 26.6 208 166-413 33-250 (267)
408 TIGR01277 thiQ thiamine ABC tr 100.0 1.8E-34 3.8E-39 314.5 23.7 199 167-408 13-212 (213)
409 cd03262 ABC_HisP_GlnQ_permease 100.0 9.7E-35 2.1E-39 316.7 21.6 194 166-403 14-213 (213)
410 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.6E-34 3.4E-39 317.0 23.3 193 878-1091 32-224 (224)
411 cd03231 ABC_CcmA_heme_exporter 100.0 8.2E-35 1.8E-39 314.1 20.7 195 857-1081 2-198 (201)
412 COG0444 DppD ABC-type dipeptid 100.0 2.1E-34 4.6E-39 316.5 24.1 224 856-1093 2-238 (316)
413 PRK00349 uvrA excinuclease ABC 100.0 2.8E-33 6E-38 355.0 37.9 122 956-1093 792-922 (943)
414 PRK00635 excinuclease ABC subu 100.0 4.4E-33 9.4E-38 365.3 40.9 134 952-1093 759-901 (1809)
415 COG4604 CeuD ABC-type enteroch 100.0 6E-36 1.3E-40 301.6 10.8 206 879-1094 12-221 (252)
416 cd03235 ABC_Metallic_Cations A 100.0 8.5E-35 1.9E-39 317.1 20.8 200 165-407 12-213 (213)
417 PRK13642 cbiO cobalt transport 100.0 3.5E-34 7.5E-39 324.4 26.5 205 165-413 20-228 (277)
418 PRK14248 phosphate ABC transpo 100.0 2E-34 4.2E-39 325.2 24.4 215 855-1093 21-247 (268)
419 PRK14275 phosphate ABC transpo 100.0 2.3E-34 5E-39 327.0 25.1 215 855-1093 39-265 (286)
420 PRK14271 phosphate ABC transpo 100.0 3E-34 6.5E-39 324.4 25.7 219 855-1093 21-246 (276)
421 TIGR02770 nickel_nikD nickel i 100.0 1.5E-34 3.2E-39 318.9 22.6 207 167-413 1-214 (230)
422 PRK14261 phosphate ABC transpo 100.0 2.7E-34 5.9E-39 321.5 25.0 219 855-1093 6-232 (253)
423 PRK15112 antimicrobial peptide 100.0 2.8E-34 6.1E-39 323.5 25.3 207 165-413 26-238 (267)
424 TIGR01184 ntrCD nitrate transp 100.0 1.3E-34 2.8E-39 319.2 21.8 202 168-412 1-202 (230)
425 TIGR02142 modC_ABC molybdenum 100.0 1.7E-34 3.7E-39 337.2 24.1 199 170-413 15-220 (354)
426 PRK14237 phosphate transporter 100.0 4.7E-34 1E-38 321.7 26.9 230 112-413 14-250 (267)
427 PRK14241 phosphate transporter 100.0 3.5E-34 7.6E-39 321.5 25.7 211 166-413 18-241 (258)
428 PRK15056 manganese/iron transp 100.0 1.6E-34 3.5E-39 326.4 23.0 218 855-1094 6-226 (272)
429 PRK14251 phosphate ABC transpo 100.0 3E-34 6.5E-39 320.8 25.0 215 855-1093 4-230 (251)
430 KOG0066 eIF2-interacting prote 100.0 4.6E-34 1E-38 314.5 25.8 201 853-1093 584-786 (807)
431 COG4175 ProV ABC-type proline/ 100.0 3.9E-35 8.5E-40 315.3 17.0 201 881-1093 41-249 (386)
432 COG1245 Predicted ATPase, RNas 100.0 1.3E-33 2.7E-38 315.4 29.5 173 884-1082 357-530 (591)
433 PRK14270 phosphate ABC transpo 100.0 5.2E-34 1.1E-38 318.8 26.6 210 166-413 18-234 (251)
434 PRK14255 phosphate ABC transpo 100.0 4.6E-34 1E-38 319.5 26.2 215 855-1093 5-231 (252)
435 PRK15439 autoinducer 2 ABC tra 100.0 1.4E-34 3.1E-39 354.8 24.0 211 855-1094 11-225 (510)
436 TIGR02633 xylG D-xylose ABC tr 100.0 1.9E-34 4.1E-39 353.8 25.0 220 856-1095 2-227 (500)
437 PRK10419 nikE nickel transport 100.0 3.4E-34 7.3E-39 322.9 24.9 224 856-1094 4-237 (268)
438 PRK14245 phosphate ABC transpo 100.0 4.8E-34 1E-38 318.9 25.9 209 166-413 17-233 (250)
439 PLN03130 ABC transporter C fam 100.0 8.7E-35 1.9E-39 392.6 23.9 257 78-414 1199-1461(1622)
440 PRK11288 araG L-arabinose tran 100.0 1.9E-34 4.1E-39 353.5 24.7 216 855-1092 4-223 (501)
441 TIGR01192 chvA glucan exporter 100.0 1.4E-34 3E-39 360.4 23.7 257 78-414 299-558 (585)
442 PRK14256 phosphate ABC transpo 100.0 5.8E-34 1.3E-38 318.6 26.4 211 166-413 18-235 (252)
443 PRK11701 phnK phosphonate C-P 100.0 5.3E-34 1.2E-38 320.0 26.1 206 166-413 20-240 (258)
444 PRK14269 phosphate ABC transpo 100.0 4.6E-34 9.9E-39 318.2 25.4 208 166-413 16-229 (246)
445 PRK14265 phosphate ABC transpo 100.0 5.1E-34 1.1E-38 322.3 26.1 216 853-1093 18-253 (274)
446 TIGR01846 type_I_sec_HlyB type 100.0 4.5E-33 9.9E-38 354.3 38.0 213 853-1093 453-675 (694)
447 cd03252 ABCC_Hemolysin The ABC 100.0 6.1E-35 1.3E-39 323.6 18.0 209 857-1093 2-220 (237)
448 PRK10247 putative ABC transpor 100.0 2E-34 4.3E-39 316.7 21.7 209 855-1091 7-220 (225)
449 PRK14254 phosphate ABC transpo 100.0 4.5E-34 9.9E-39 324.2 25.3 213 855-1093 39-264 (285)
450 PRK11174 cysteine/glutathione 100.0 6.4E-35 1.4E-39 365.4 19.9 210 854-1093 348-567 (588)
451 PRK10418 nikD nickel transport 100.0 8.1E-34 1.8E-38 317.7 26.4 202 167-413 18-229 (254)
452 PRK14274 phosphate ABC transpo 100.0 7.1E-34 1.5E-38 319.2 26.0 210 166-413 26-242 (259)
453 PRK10982 galactose/methyl gala 100.0 2.4E-34 5.3E-39 351.9 24.1 206 881-1095 11-220 (491)
454 TIGR01166 cbiO cobalt transpor 100.0 1.6E-34 3.5E-39 309.1 19.7 179 880-1068 4-188 (190)
455 PRK14262 phosphate ABC transpo 100.0 7E-34 1.5E-38 317.6 25.7 210 166-413 17-233 (250)
456 PRK14238 phosphate transporter 100.0 4.7E-34 1E-38 322.2 24.3 215 855-1093 24-250 (271)
457 CHL00131 ycf16 sulfate ABC tra 100.0 7.3E-34 1.6E-38 317.9 25.7 220 855-1093 7-236 (252)
458 PRK14239 phosphate transporter 100.0 9.3E-34 2E-38 317.1 26.4 210 166-413 19-235 (252)
459 TIGR02323 CP_lyasePhnK phospho 100.0 4.6E-34 1E-38 319.7 23.9 215 855-1093 3-233 (253)
460 TIGR03375 type_I_sec_LssB type 100.0 1.4E-32 3E-37 350.2 40.5 212 854-1093 462-683 (694)
461 PLN03232 ABC transporter C fam 100.0 1.1E-34 2.4E-39 391.8 22.6 257 78-414 1196-1458(1495)
462 PRK14243 phosphate transporter 100.0 5.3E-34 1.1E-38 320.8 24.3 218 855-1093 10-243 (264)
463 PRK14259 phosphate ABC transpo 100.0 5.6E-34 1.2E-38 321.3 24.5 205 166-413 27-252 (269)
464 cd03230 ABC_DR_subfamily_A Thi 100.0 2.9E-34 6.3E-39 302.3 20.6 168 857-1084 2-171 (173)
465 cd03213 ABCG_EPDR ABCG transpo 100.0 6.2E-34 1.4E-38 305.3 23.5 170 165-407 22-194 (194)
466 TIGR02204 MsbA_rel ABC transpo 100.0 1.5E-34 3.3E-39 361.4 21.6 259 78-414 301-563 (576)
467 PRK03695 vitamin B12-transport 100.0 4.5E-34 9.7E-39 318.4 22.8 197 883-1093 11-217 (248)
468 PRK14248 phosphate ABC transpo 100.0 1.5E-33 3.3E-38 317.9 27.4 207 166-413 35-251 (268)
469 PRK13547 hmuV hemin importer A 100.0 7.8E-34 1.7E-38 319.7 24.8 212 166-413 15-243 (272)
470 PRK14240 phosphate transporter 100.0 1.1E-33 2.4E-38 316.0 25.8 210 166-413 17-233 (250)
471 PRK14246 phosphate ABC transpo 100.0 8.9E-34 1.9E-38 317.3 24.8 216 855-1093 10-236 (257)
472 PRK14266 phosphate ABC transpo 100.0 8.4E-34 1.8E-38 317.0 24.5 219 855-1093 3-229 (250)
473 PRK13539 cytochrome c biogenes 100.0 3.8E-34 8.2E-39 310.3 20.9 197 856-1082 3-199 (207)
474 cd03252 ABCC_Hemolysin The ABC 100.0 4.5E-34 9.7E-39 316.7 21.9 205 166-414 16-225 (237)
475 cd03245 ABCC_bacteriocin_expor 100.0 2.3E-34 5.1E-39 315.3 19.3 209 856-1091 3-220 (220)
476 PRK14272 phosphate ABC transpo 100.0 1.6E-33 3.4E-38 315.2 26.2 207 166-413 18-235 (252)
477 PRK14271 phosphate ABC transpo 100.0 1.5E-33 3.3E-38 318.6 26.2 210 166-413 35-250 (276)
478 PRK09580 sufC cysteine desulfu 100.0 1.2E-33 2.6E-38 315.5 24.8 219 856-1093 2-230 (248)
479 cd03251 ABCC_MsbA MsbA is an e 100.0 1.6E-34 3.4E-39 319.7 17.5 209 857-1093 2-220 (234)
480 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.7E-34 8E-39 321.8 20.4 210 855-1093 2-220 (275)
481 PRK14236 phosphate transporter 100.0 2.1E-33 4.6E-38 317.3 26.5 210 166-413 39-255 (272)
482 PRK14251 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 314.7 25.5 210 166-413 18-234 (251)
483 cd03229 ABC_Class3 This class 100.0 4E-34 8.7E-39 302.6 19.3 170 857-1084 2-177 (178)
484 PRK14252 phosphate ABC transpo 100.0 2.1E-33 4.6E-38 316.3 26.3 217 853-1093 14-244 (265)
485 PRK14253 phosphate ABC transpo 100.0 1.4E-33 3.1E-38 314.9 24.7 209 166-412 17-231 (249)
486 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2E-34 4.3E-39 319.7 17.6 210 857-1093 2-221 (238)
487 PRK14275 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 318.9 26.6 203 166-413 53-269 (286)
488 TIGR01189 ccmA heme ABC export 100.0 5.2E-34 1.1E-38 307.2 20.4 194 857-1080 2-197 (198)
489 PRK14244 phosphate ABC transpo 100.0 2E-33 4.3E-38 314.1 25.6 211 166-413 19-236 (251)
490 PRK14258 phosphate ABC transpo 100.0 2.5E-33 5.3E-38 314.9 26.3 212 166-413 21-244 (261)
491 PRK11176 lipid transporter ATP 100.0 2.9E-34 6.2E-39 359.2 20.8 213 854-1093 340-562 (582)
492 cd03254 ABCC_Glucan_exporter_l 100.0 2.3E-34 5E-39 317.3 17.4 211 855-1093 2-221 (229)
493 COG4604 CeuD ABC-type enteroch 100.0 6E-35 1.3E-39 294.3 11.6 212 162-414 11-225 (252)
494 PRK10419 nikE nickel transport 100.0 1.6E-33 3.5E-38 317.4 24.6 206 165-413 25-240 (268)
495 TIGR02324 CP_lyasePhnL phospho 100.0 1.2E-33 2.5E-38 310.6 22.8 210 856-1082 2-223 (224)
496 cd03289 ABCC_CFTR2 The CFTR su 100.0 8.5E-34 1.8E-38 318.8 22.0 198 166-414 18-225 (275)
497 TIGR02203 MsbA_lipidA lipid A 100.0 1.1E-32 2.4E-37 344.4 34.5 213 854-1093 329-551 (571)
498 PRK14260 phosphate ABC transpo 100.0 2E-33 4.4E-38 315.4 25.0 210 166-413 21-242 (259)
499 TIGR02868 CydC thiol reductant 100.0 2E-34 4.4E-39 356.4 18.5 227 78-383 297-528 (529)
500 TIGR02323 CP_lyasePhnK phospho 100.0 2.6E-33 5.6E-38 313.6 25.7 206 166-413 17-237 (253)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6e-215 Score=1960.11 Aligned_cols=1115 Identities=54% Similarity=0.932 Sum_probs=1039.3
Q ss_pred cchHHhhhHHHHhhCCChhhhhhcccccCCCCcccccccccchHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCC
Q 000913 36 EDDEEALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP 115 (1226)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1226)
+||||+|+|||++||||++| +++.+... .++|+.+++..++..+.++..+..++|+++++.+++++.+++ ++|
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p 84 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFE--SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELP 84 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhcc--CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCC
Confidence 45999999999999999999 66543211 279999999999999999999999999999999999999998 889
Q ss_pred cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHH
Q 000913 116 KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLL 195 (1226)
Q Consensus 116 ~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 195 (1226)
.++++++++.+++++..| ||++|...+.++.++...+.. ++...+||+|+||.++||+|++++|||||||||||
T Consensus 85 ~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttll 158 (1391)
T KOG0065|consen 85 TIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLL 158 (1391)
T ss_pred ceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHH
Confidence 999999999999998766 999999999999888766644 55668899999999999999999999999999999
Q ss_pred HHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCC
Q 000913 196 LALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1226)
Q Consensus 196 ~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1226)
++|+|.++.....+|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ +..|++++.
T Consensus 159 kal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~-- 233 (1391)
T KOG0065|consen 159 KALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA-- 233 (1391)
T ss_pred HHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH--
Confidence 999999998877889999999999999999999999999999999999999999999999998876 555655431
Q ss_pred CCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCC
Q 000913 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLD 355 (1226)
Q Consensus 276 ~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD 355 (1226)
.++|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|+|||
T Consensus 234 ---------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLD 292 (1391)
T KOG0065|consen 234 ---------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLD 292 (1391)
T ss_pred ---------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccccccc
Confidence 36899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHH
Q 000913 356 SSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1226)
Q Consensus 356 s~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~ 435 (1226)
++|+.+++++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||+++
T Consensus 293 SsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~ 372 (1391)
T KOG0065|consen 293 SSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTE 372 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCccccchhhccccccccCCcHHHHHHHHHHHHHHH
Q 000913 436 VTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLL 515 (1226)
Q Consensus 436 v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~ 515 (1226)
+++++++.++|..+..|+.+.++.++.+.|.+++.+.++..+++.++++.+.++.++..++|.++.|+|+++|+.|++++
T Consensus 373 vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l 452 (1391)
T KOG0065|consen 373 VTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLL 452 (1391)
T ss_pred hhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhHHhhccccc
Q 000913 516 MKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFF 595 (1226)
Q Consensus 516 ~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y 595 (1226)
++||.+++++++++.+++|+++|++|+++.+ ++..+...+.|++||++++.+|+++++++.+++++|||+|||+..||
T Consensus 453 ~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY 530 (1391)
T KOG0065|consen 453 MKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFY 530 (1391)
T ss_pred HhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhccccc
Confidence 9999999999999999999999999999885 55677889999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q 000913 596 PPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFAL 675 (1226)
Q Consensus 596 ~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~ 675 (1226)
+||+|.++.+++++|+.++++++|.+|+||++||.+++++||++|+++++++++++++|++++++++++.+|+.+|++.+
T Consensus 531 ~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~ 610 (1391)
T KOG0065|consen 531 PPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILL 610 (1391)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCccccc------------cCC---Cccchhhhhhhcc
Q 000913 676 LVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKF------------TQD---SSETLGVQVLKSR 740 (1226)
Q Consensus 676 l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~------------~~~---~~~~~G~~~L~~~ 740 (1226)
+++.+++||+++..+||+||+|++|++|++|+++++++|||++.+|+|. ... ...+.|..+++.+
T Consensus 611 L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~ 690 (1391)
T KOG0065|consen 611 LVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGR 690 (1391)
T ss_pred HHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEecc
Confidence 9999999999999999999999999999999999999999999999997 111 2356789999998
Q ss_pred Ccc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCC
Q 000913 741 GFF-----AHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTR 815 (1226)
Q Consensus 741 ~~~-----~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1226)
++. ...+|+|+++|+++||+++|++++.+++.|++|..+.++++..+........... .
T Consensus 691 ~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~----------------~ 754 (1391)
T KOG0065|consen 691 DYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSA----------------G 754 (1391)
T ss_pred cccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhc----------------c
Confidence 887 7889999999999999999999999999999999888887665443322110000 0
Q ss_pred CCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCe
Q 000913 816 SGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGV 895 (1226)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge 895 (1226)
..... .. ..+....+++++..|+.|..++++||.|.+++|.+++.+| +++++|+||||.++||.
T Consensus 755 ~~~~~-----------~~--~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~ 818 (1391)
T KOG0065|consen 755 SSSEI-----------EK--LDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGV 818 (1391)
T ss_pred ccccc-----------cc--cccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCc
Confidence 00000 00 0001111355778899999999999999999999888877 67899999999999999
Q ss_pred EEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCC
Q 000913 896 LTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVD 975 (1226)
Q Consensus 896 ~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~ 975 (1226)
++||||+||||||||||+||||+++|.++|+|.|||+|++++.|+|.+|||+|+|+|.+.+||||.|.|+|+||++.+++
T Consensus 819 LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~ 898 (1391)
T KOG0065|consen 819 LTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVS 898 (1391)
T ss_pred eeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHH
Q 000913 976 SETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTV 1054 (1226)
Q Consensus 976 ~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p-~il~LDEPTsgLD~~~~~~i~~~l~~~~ 1054 (1226)
.+++.++|++|++.|||++++|.+||.|| +|||++|||||+||+||++|| .||||||||||||++++..|++++|+++
T Consensus 899 ~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla 977 (1391)
T KOG0065|consen 899 DEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLA 977 (1391)
T ss_pred HHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999999999 8999999999999999999999999999
Q ss_pred hCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCcchhhHHHHHHhCCCccCCCCCCCccceeeeecchhhhhh
Q 000913 1055 DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQELA 1134 (1226)
Q Consensus 1055 ~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~ 1134 (1226)
++|+|||||+||||.++||.||++++|++||++||+||+|++++.+++||++++|++ |++..|||||||||++.+.+..
T Consensus 978 ~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~ 1056 (1391)
T KOG0065|consen 978 DTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEAS 1056 (1391)
T ss_pred hcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccc
Confidence 999999999999999999999999999999999999999999999999999999875 6666699999999999988888
Q ss_pred hcCCHHHHhhccHHHHHHHHHHhhhCCCCCC-CCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 000913 1135 LGIDFTEHYKRSDLYRRNKALIEDLSRPPPG-SKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIAL 1213 (1226)
Q Consensus 1135 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l 1213 (1226)
.+.||++.|++|++++++++++++++.++++ +.+..++++|++|+|.|++.|+||++++|||+|+|+++|++++++.||
T Consensus 1057 ~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl 1136 (1391)
T KOG0065|consen 1057 LSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGL 1136 (1391)
T ss_pred cCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999998 778888899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCC
Q 000913 1214 LFGSLFWDLGGR 1225 (1226)
Q Consensus 1214 ~~g~~~~~~g~~ 1225 (1226)
+||++||++|.+
T Consensus 1137 ~iGf~F~~~g~~ 1148 (1391)
T KOG0065|consen 1137 FIGFTFWKVGHN 1148 (1391)
T ss_pred hheeeeeecCCc
Confidence 999999999964
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.6e-195 Score=1915.56 Aligned_cols=1203 Identities=62% Similarity=1.051 Sum_probs=1051.0
Q ss_pred cccccCCCCccccC---C----CCcchHHhhhHHHHhhCCChhhhhhcccccC-----CCC---cccccccccchHhhHH
Q 000913 19 SRWNTNSIGAFSRS---S----REEDDEEALKWAALEKLPTYNRLRKGILTTS-----RGE---ANEVDVYNLGLQERQR 83 (1226)
Q Consensus 19 ~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~ 83 (1226)
++|.. +++|++. . ..|||||+|+|||+||||||+|+|++++.+. .|+ ..|+|+++|+.++++.
T Consensus 19 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (1470)
T PLN03140 19 SSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQK 96 (1470)
T ss_pred hhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHH
Confidence 34633 6888552 1 2578999999999999999999999999652 122 2369999999999999
Q ss_pred HHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcc
Q 000913 84 LIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKR 163 (1226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1226)
+++|++++.++|+++|++++++|.+++|+++|++||+|+||+|+++++++++.+||++|.+.+.++.+.+.++...+++.
T Consensus 97 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~ 176 (1470)
T PLN03140 97 FIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKT 176 (1470)
T ss_pred HHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888765554344556
Q ss_pred cceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCH
Q 000913 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1226)
+++||+||||.++||++++|+||||||||||||+|+|+++++.+++|+|+|||+++++..+++.++||+|+|.|++++||
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV 256 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTV 256 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcH
Confidence 78899999999999999999999999999999999999998777899999999998877677889999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+|||.|+++|++.+.++++..+..+++++.++.|+.++|.+|++.+.++.+.+..++.+|+.+||++|+||.||++++++
T Consensus 257 ~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rg 336 (1470)
T PLN03140 257 KETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRG 336 (1470)
T ss_pred HHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccC
Confidence 99999999998776666555566677777777888889999999888888888899999999999999999999999999
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|++
T Consensus 337 lSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~i 416 (1470)
T PLN03140 337 ISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQI 416 (1470)
T ss_pred CCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceE
Confidence 99999999999999999999999999999999999999999999998766889999999999999999999999999999
Q ss_pred EEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCcc
Q 000913 404 VYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFD 483 (1226)
Q Consensus 404 v~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~~~~ 483 (1226)
+|+||++++.+||+++||+||+++++|||+++++++++++++|.....|+++.++++++++|++++.++.+.+++..|.+
T Consensus 417 vy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 496 (1470)
T PLN03140 417 VYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFD 496 (1470)
T ss_pred EEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999988888887766777888999999999999999888888777766
Q ss_pred ccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHH
Q 000913 484 KSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFF 563 (1226)
Q Consensus 484 ~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lff 563 (1226)
+...++.....++|..++++|+++|++|++++++||+.++++|+++.+++|+++|++|++++.+.....++..+.|++||
T Consensus 497 ~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff 576 (1470)
T PLN03140 497 KSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLF 576 (1470)
T ss_pred hhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHH
Confidence 65556665666779999999999999999999999999999999999999999999999987665555567788999999
Q ss_pred HHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHHHH
Q 000913 564 AITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALL 643 (1226)
Q Consensus 564 ~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~ 643 (1226)
++++.+++++++++.++.++|||+|||+.+||++|+|++|++++++|+.++++++|++|+|||+||++++++||.|++++
T Consensus 577 ~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~ 656 (1470)
T PLN03140 577 SMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLV 656 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCcccc
Q 000913 644 LGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKK 723 (1226)
Q Consensus 644 ~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~ 723 (1226)
++++++++++|++++++++++.+|+.+++++++++++|+||++++++||+||+|++|+||++|+++|+++|||.+..|.+
T Consensus 657 ~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~ 736 (1470)
T PLN03140 657 FLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMN 736 (1470)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988864
Q ss_pred cc-CCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCccc
Q 000913 724 FT-QDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQ 802 (1226)
Q Consensus 724 ~~-~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1226)
.. .+...+.|.++|+.+|+..++.|+|+++++|++|+++|+++++++++|.++......++..+...............
T Consensus 737 ~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1470)
T PLN03140 737 KMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRS 816 (1470)
T ss_pred cccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccc
Confidence 32 23346789999999999999999999999999999999999999999999766655554222111000000000000
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccCceE
Q 000913 803 LSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLV 882 (1226)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~ 882 (1226)
.....+..........+..... .... .............++++.+|+.|..++|+||+|.++.+..++..+..++++.
T Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~ 894 (1470)
T PLN03140 817 LSSADGNNTREVAIQRMSNPEG-LSKN-RDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQ 894 (1470)
T ss_pred cccccccccccccccccccccc-cccc-cccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCce
Confidence 0000000000000000000000 0000 0000000001123456677899999999999999998776554444455678
Q ss_pred EeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhhhcceeeEeecCCCCCCCCCHHHHH
Q 000913 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESL 962 (1226)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l 962 (1226)
+|+|||++++||+++||||||||||||||++|+|+.++|..+|+|.+||.+..+..+++.+|||+|+|.+++.+||+|+|
T Consensus 895 iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L 974 (1470)
T PLN03140 895 LLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESL 974 (1470)
T ss_pred EeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHH
Confidence 99999999999999999999999999999999999877778999999999876556777899999999999999999999
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 000913 963 LFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1042 (1226)
Q Consensus 963 ~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~ 1042 (1226)
.|++.+|.+...+.++++++++++++.++|.+++|+.+|.+++++|||||||||+||++|+.+|+||||||||+|||+.+
T Consensus 975 ~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~ 1054 (1470)
T PLN03140 975 IYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1054 (1470)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Confidence 99998887666666777788999999999999999999988888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCcchhhHHHHHHhCCCccCCCCCCCccce
Q 000913 1043 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATW 1122 (1226)
Q Consensus 1043 ~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~ 1122 (1226)
+..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++|||||
T Consensus 1055 a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~ 1134 (1470)
T PLN03140 1055 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATW 1134 (1470)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhh
Confidence 99999999999988999999999999888999999999998899999999999999999999999888889999999999
Q ss_pred eeeecchhhhhhhcCCHHHHhhccHHHHHHHHHHhhhCCCCCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHH
Q 000913 1123 MLEVSAASQELALGIDFTEHYKRSDLYRRNKALIEDLSRPPPGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTA 1202 (1226)
Q Consensus 1123 ~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~ 1202 (1226)
|||+++...+...+.||++.|++|++++++++.++++..+.+...+..++++|++++++|+++|+||+++++||||.|++
T Consensus 1135 ~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~ 1214 (1470)
T PLN03140 1135 MLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNL 1214 (1470)
T ss_pred hhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHH
Confidence 99999876655556799999999999999888888887776666666667889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCC
Q 000913 1203 VRFFFTAFIALLFGSLFWDLGGR 1225 (1226)
Q Consensus 1203 ~r~~~~~~~~l~~g~~~~~~g~~ 1225 (1226)
+|+++++++||++|++||++|++
T Consensus 1215 ~r~~~~i~~al~~G~~f~~~~~~ 1237 (1470)
T PLN03140 1215 VRFFFTLAAALMVGTIFWKVGTK 1237 (1470)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999999999864
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.8e-154 Score=1535.22 Aligned_cols=1069 Identities=33% Similarity=0.550 Sum_probs=866.0
Q ss_pred cChHHHHHHHHHHhhhcCCCCC--cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeece
Q 000913 94 VDNERFLLKLKNRIDRVGIDLP--KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDV 171 (1226)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 171 (1226)
.|.+++++.++++.++.+...| +++|+|+||+|++ ...+....||++|.+.+.+..+...+. ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4667777765555555555555 9999999999999 445666789999998887765443331 12344567899999
Q ss_pred eEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCHHHHHH
Q 000913 172 SGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETLA 248 (1226)
Q Consensus 172 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1226)
|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||.++++.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 99999999999999999999999999999974211 24999999999875432 2456999999999999999999999
Q ss_pred HHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhH
Q 000913 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1226)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1226)
|+++++.+...... ..+.+ ..+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~~---~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPDG---VSREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCCC---CCHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 99887643211000 00000 01123567899999999999999999999999999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecC
Q 000913 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1226)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1226)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999875678999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCcccc---
Q 000913 409 RELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKS--- 485 (1226)
Q Consensus 409 ~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~~~~~~--- 485 (1226)
++++.+||+++||.||++.++|||+.+++++.+. +++...+. ....+.++++++|++++.++++..+++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987542 22211111 123578899999999987776666554322110
Q ss_pred ------------chhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccc
Q 000913 486 ------------KSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTD 553 (1226)
Q Consensus 486 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~ 553 (1226)
...+.......|..++|+|+++|++|+++.++||+..++.++++.+++|+++|++|++.+.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 000011223468889999999999999999999999999999999999999999999765432 34
Q ss_pred ccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCch
Q 000913 554 GGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNA 633 (1226)
Q Consensus 554 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~ 633 (1226)
.+.+.|++||++++.++.++.+++.++.+|++|+|||..++|++++|++|+.+.++|+.++.+++|++|+|||+||.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHH
Q 000913 634 GRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVA 713 (1226)
Q Consensus 634 ~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 713 (1226)
++||.|+++++++.+++.+++++++++++++.+|+.+++++++++++|+||+++.++||+||+|++|+||+.|+++|++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcccccc--C----------------------CCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHH
Q 000913 714 NEFLGHSWKKFT--Q----------------------DSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTL 769 (1226)
Q Consensus 714 nef~~~~~~~~~--~----------------------~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l 769 (1226)
|||.+..+.|.. | +.....|.++|+. ++.....|.|.+++++++|+++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887741 1 1123578889985 44445678999999999999999999999
Q ss_pred HHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCcc
Q 000913 770 ALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVL 849 (1226)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (1226)
++.|.++......++............... .........++..... ......+... .......
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~e~~~~~~-----~~~~~~~~~~-~~~~~~~ 751 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGE-----------TSASNKNDIEAGEVLG-----STDLTDESDD-VNDEKDM 751 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhccc-----------ccccccccccccccCC-----CCcccccccc-ccccccc
Confidence 999988654443332211100000000000 0000000000000000 0000000000 0000000
Q ss_pred C--CCCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEE
Q 000913 850 P--FEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGN 926 (1226)
Q Consensus 850 ~--~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~ 926 (1226)
| .....++|+||+|.++.+ .+++.+|+|||++++|||++||||||||||||||++|+|+.++| +.+|+
T Consensus 752 ~~~~~~~~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~ 822 (1394)
T TIGR00956 752 EKESGEDIFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGD 822 (1394)
T ss_pred cccCCCceEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeE
Confidence 1 112357999999988532 13467999999999999999999999999999999999997644 45699
Q ss_pred EEEcCccCChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 927 ITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 927 i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
|.+||.+... .+++.+|||+|+|.+++.+||+|+|.|++.++.+...+.++++++++++++.++|.+++|+.+|.++ .
T Consensus 823 I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~ 900 (1394)
T TIGR00956 823 RLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-E 900 (1394)
T ss_pred EEECCEECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-C
Confidence 9999998753 4677899999999999999999999999988876666677778889999999999999999998764 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1007 GLSTEQRKRLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~-il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
+|||||||||+||+||+.+|+ ||||||||||||+.++..|++.|++++++|+|||||+|||+..+++.||++++|++||
T Consensus 901 ~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 901 GLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 899999999999999999997 9999999999999999999999999988899999999999977889999999999988
Q ss_pred EEEEeCCCCcchhhHHHHHHhCCCccCCCCCCCccceeeeecchhhhhhhcCCHHHHhhccHHHHHHHHHHhhhCCCCCC
Q 000913 1086 QEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQELALGIDFTEHYKRSDLYRRNKALIEDLSRPPPG 1165 (1226)
Q Consensus 1086 ~~~y~G~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 1165 (1226)
+++|+|+.+.+++++++||+++ |.++||+++|||||+||+++...+.....+|.+.|+.|+.++...+.++.+..+...
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 1059 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSK 1059 (1394)
T ss_pred EEEEECCcccccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhccccc
Confidence 9999999998889999999986 666799999999999999886544333468999999999887766655554332211
Q ss_pred CC---CCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000913 1166 SK---DLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGR 1225 (1226)
Q Consensus 1166 ~~---~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~~~~~g~~ 1225 (1226)
.. +.....+|++||++|+++|++|+++++||||.|+++|+++++++|+++|++||++|++
T Consensus 1060 ~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~ 1122 (1394)
T TIGR00956 1060 AEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS 1122 (1394)
T ss_pred CccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 11 1112247899999999999999999999999999999999999999999999999875
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-83 Score=791.44 Aligned_cols=583 Identities=30% Similarity=0.498 Sum_probs=492.6
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHH
Q 000913 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1226)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1226)
...++++|+|++++.... .+..+++|+||||.++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 457889999999998542 114577999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhc
Q 000913 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1226)
Q Consensus 194 LL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1226)
||++|+|+......++|+|++||++.+....++.+|||.|+|.+++++||+|||.|+++++-+.. .
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~------- 137 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------L------- 137 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------C-------
Confidence 99999999987667899999999887766677899999999999999999999999999875432 0
Q ss_pred CCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCC
Q 000913 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1226)
Q Consensus 274 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsg 353 (1226)
..++.+.+++.+++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 138 -----------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 138 -----------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -----------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 112345678999999999999999999998999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000913 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1226)
Q Consensus 354 LDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1226)
||+.++.++++.|+++|+. ++|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++||+||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999986 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCch--hhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCccccchhhccccccccCCcHHHHHHHHHHH
Q 000913 434 QEVTSRK--DQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISR 511 (1226)
Q Consensus 434 ~~v~s~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 511 (1226)
.++.+.. .+..... .......+.++......+............ .........++|.|+..+++|
T Consensus 280 l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHHHHhhhcccc-----cccccccCCcHHHHHHHHHHH
Confidence 9988743 1110000 000001111110000000000000000000 000111167899999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHHH-HHHHHHhhchhhHHhh
Q 000913 512 ELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFS-EISMTIAKLPVFYKQR 590 (1226)
Q Consensus 512 ~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~kqr 590 (1226)
.+..+.|++.++..|+++.+++++++|++||+.+.... ......|++||.+.+..+..+. .++.+..++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999998754333 2235678888888887666555 6889999999999999
Q ss_pred cccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Q 000913 591 DFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTF 670 (1226)
Q Consensus 591 ~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~ 670 (1226)
..++|+.++|++++.+.++|+.++.+++|++++|||+|++++..+|+.+.+++++..+++.+++.++++..++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCccccccC--CCccchhhhhhhccCcccccch
Q 000913 671 GSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQ--DSSETLGVQVLKSRGFFAHEYW 748 (1226)
Q Consensus 671 ~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~G~~~L~~~~~~~~~~~ 748 (1226)
++++++.+++++||+++.++||.||+|+.|+|+++|++++++.|||.+....|... ..+...|.++++..++... .
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--S 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--c
Confidence 99999999999999999999999999999999999999999999999743444332 3456678899998887654 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000913 749 YWLGLGALFGFVLLLNFAYTLALTFLD 775 (1226)
Q Consensus 749 ~w~~~g~l~~~~~~f~~~~~l~l~~~~ 775 (1226)
.|.++.+++++.++|++++++++++..
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 689999999999999999999998864
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.1e-82 Score=789.50 Aligned_cols=609 Identities=21% Similarity=0.324 Sum_probs=472.3
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHH
Q 000913 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1226)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1226)
.++++++|.|+++.+.......+... +...+..- ........+...+++|+|||+.++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~-~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHK-PKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----cccccccc-cccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 45799999999999754210111100 00000000 00000111223467999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhc
Q 000913 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1226)
Q Consensus 194 LL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1226)
||++|+|+++++ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.+... .
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------~------ 174 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------T------ 174 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC-------C------
Confidence 999999998874 3589999999987532 235699999999999999999999998765421100 0
Q ss_pred CCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCC
Q 000913 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1226)
Q Consensus 274 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsg 353 (1226)
.++....++.+++.+||++++||.||++..++|||||||||+||++|+.+|+||||||||+|
T Consensus 175 ------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 175 ------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 01122346788999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000913 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1226)
Q Consensus 354 LDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1226)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+++++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999876 5789999999988889999999999999999999999999999999999999999999999
Q ss_pred HHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcC---Cccccc-----hhhc-cccccccCCcHHHH
Q 000913 434 QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT---PFDKSK-----SHRA-ALTTETYGVGKREL 504 (1226)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~---~~~~~~-----~~~~-~~~~~~~~~s~~~~ 504 (1226)
.++.+...+.......+.+ ...+.+.+.|++... ....+.... +..... ..+. ......+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000001 112333444432111 111111100 000000 0000 00112245689999
Q ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHH-hHHHHHHHHHhhc
Q 000913 505 LKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNF-NGFSEISMTIAKL 583 (1226)
Q Consensus 505 ~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~l~~~~~-~~~~~~~~~~~~~ 583 (1226)
+..+++|.++. +|+..+...|+++.+++|+++|++|++.+ ..+.+.+.|++||++++.++ ..++.++.+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78888888999999999999999999653 23456678999998877554 5567888899999
Q ss_pred hhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000913 584 PVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRN 663 (1226)
Q Consensus 584 ~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~ 663 (1226)
++|+|||..++|++++|++|+++.++|+.++.+++|++|+|||+|+.+++++||.|+++++++.+++++++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCcc-----ccccCCCccchhhhhhh
Q 000913 664 MVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW-----KKFTQDSSETLGVQVLK 738 (1226)
Q Consensus 664 ~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~G~~~L~ 738 (1226)
+.+|+.+++++++++++|+||+++ +||+||+|++|+||++|++++++.|||.+.+. .|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 79999999999999999999999999976542 33221110111122232
Q ss_pred ccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000913 739 SRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLD 775 (1226)
Q Consensus 739 ~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~ 775 (1226)
...+. ....|.++++|++++++|+++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 235788999999999999999999998654
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.2e-82 Score=793.29 Aligned_cols=569 Identities=25% Similarity=0.415 Sum_probs=481.9
Q ss_pred cccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCC
Q 000913 162 KRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1226)
+.++++|+|||+.++|||+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34577999999999999999999999999999999999998875456899999999876544567899999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc-
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM- 320 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 320 (1226)
||+|||.|+++++.+.... .++....++.+++.+||++++||.||+.+
T Consensus 115 TV~e~l~f~~~~~~~~~~~-------------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVT-------------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCC-------------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 9999999998776432100 01122357889999999999999999864
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
.++|||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999999999999999999999999999999999999999876 5889999999999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcC
Q 000913 401 GQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT 480 (1226)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~ 480 (1226)
|+++|+|+++++.+||+++||+||++.||+||+.++.+....... . .....+++.+.|+.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998875322110 0 011234566666666554444333221
Q ss_pred Cccccc---hhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccch
Q 000913 481 PFDKSK---SHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIF 557 (1226)
Q Consensus 481 ~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~ 557 (1226)
...+.. ..........+..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 111000 00001122356788999999999999999999999999999999999999999999765432 344556
Q ss_pred hhHHHHHHHHHHHhHH-HHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHH
Q 000913 558 AGATFFAITMVNFNGF-SEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRF 636 (1226)
Q Consensus 558 ~g~lff~l~~~~~~~~-~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f 636 (1226)
.|++|+.+++.+|.++ ..++.+..++++|+|||..++|++++|++++.+.++|+.++.+++|++++|||+|+++++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889998888777754 556777789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhh
Q 000913 637 FKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEF 716 (1226)
Q Consensus 637 ~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef 716 (1226)
|.++++++++..++.+++.++++++++..+|+.+++++++++++|+||+++.++||+||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-ccccCC---CccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000913 717 LGHSW-KKFTQD---SSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFL 774 (1226)
Q Consensus 717 ~~~~~-~~~~~~---~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~ 774 (1226)
.+..+ .|...+ .+...|.++|+.+|+..+ +.|.++++++++.++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776 343211 123458999999988654 458999999999999999999999874
No 7
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=9.4e-81 Score=824.71 Aligned_cols=596 Identities=22% Similarity=0.377 Sum_probs=499.3
Q ss_pred cCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCC
Q 000913 110 VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSS 189 (1226)
Q Consensus 110 ~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 189 (1226)
+.++...+.+.|+||+|.++.+.+.+. ...++.++.+|+|||+.++||++++|+|||||
T Consensus 859 ~~~~~~~~~~~~~~v~y~v~~~~~~~~---------------------~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGa 917 (1470)
T PLN03140 859 MVLPFTPLAMSFDDVNYFVDMPAEMKE---------------------QGVTEDRLQLLREVTGAFRPGVLTALMGVSGA 917 (1470)
T ss_pred cccCCCcceEEEEEEEEEEccCccccc---------------------cccCcCCceEeeCcEEEEECCeEEEEECCCCC
Confidence 334566678999999999865321100 01122345799999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHH
Q 000913 190 GKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARR 269 (1226)
Q Consensus 190 GKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ 269 (1226)
||||||++|+|+.++. ..+|+|.+||++.++...++.+|||+|+|.|++.+||+|||.|++.++.+...
T Consensus 918 GKTTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~---------- 986 (1470)
T PLN03140 918 GKTTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEV---------- 986 (1470)
T ss_pred CHHHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCC----------
Confidence 9999999999997642 35899999998875444456799999999999999999999998765421110
Q ss_pred HHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeec
Q 000913 270 EKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDE 349 (1226)
Q Consensus 270 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDE 349 (1226)
..++....++++++.+||++++|+.||+..+++|||||||||+||++|+.+|++|||||
T Consensus 987 ---------------------~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDE 1045 (1470)
T PLN03140 987 ---------------------SKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDE 1045 (1470)
T ss_pred ---------------------CHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeC
Confidence 00111235788999999999999999988888999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC-CeEEEecCh----hHHHHHHHhc-CC-C
Q 000913 350 ISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD-GQIVYQGPR----ELVLEFFASM-GF-R 422 (1226)
Q Consensus 350 ptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~-G~iv~~G~~----~~~~~~F~~~-Gf-~ 422 (1226)
||+|||+.++..+++.|+++++ .++|+|+++|||..++++.||++++|++ |+++|+|+. +++.+||+++ |+ +
T Consensus 1046 PTsgLD~~~a~~v~~~L~~l~~-~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~ 1124 (1470)
T PLN03140 1046 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPK 1124 (1470)
T ss_pred CCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCC
Confidence 9999999999999999999876 5789999999998889999999999996 899999996 6899999997 66 4
Q ss_pred CCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhc---CCccccchhhccccccccCC
Q 000913 423 CPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR---TPFDKSKSHRAALTTETYGV 499 (1226)
Q Consensus 423 cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~ 499 (1226)
||+..|||||+.++.+..... ....++++.|+.++.++...+++. .+.... +.......|..
T Consensus 1125 ~p~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 1189 (1470)
T PLN03140 1125 IKEKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGA---SDLYFATQYSQ 1189 (1470)
T ss_pred CCCCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCc---cccccCccccC
Confidence 999999999999998643211 112367788888877665544332 221111 11112356889
Q ss_pred cHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHH-HHHHH
Q 000913 500 GKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGF-SEISM 578 (1226)
Q Consensus 500 s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~-~~~~~ 578 (1226)
++|.|+++|++|+++..+||+.++..|+++.+++|+++|++||+.+.+..+..+.+...|++|+++++..++.. +.++.
T Consensus 1190 s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~ 1269 (1470)
T PLN03140 1190 STWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPM 1269 (1470)
T ss_pred CHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998776554455666678999998888777655 44577
Q ss_pred HHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000913 579 TIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIA 658 (1226)
Q Consensus 579 ~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~ia 658 (1226)
+..+|++|+|||..++|++++|++++.+.++|+.++.+++|.+|+|||+||.++++.||.++++++++.+++.+++.+++
T Consensus 1270 ~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~ 1349 (1470)
T PLN03140 1270 VAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTV 1349 (1470)
T ss_pred HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCccccccCCC-ccchhhhh-
Q 000913 659 VTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDS-SETLGVQV- 736 (1226)
Q Consensus 659 ~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~-~~~~G~~~- 736 (1226)
+++|+..+|..++++++.++++|+||++++++||+||+|+||+||+.|++++++.|||.+....+.+++. ....+.++
T Consensus 1350 a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~ 1429 (1470)
T PLN03140 1350 SLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYI 1429 (1470)
T ss_pred HHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988776655432 11234444
Q ss_pred hhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000913 737 LKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDP 776 (1226)
Q Consensus 737 L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~ 776 (1226)
+..+|+. ..|.|.+++++++|+++|.++++++++++++
T Consensus 1430 ~~~~g~~--~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1430 QDHYGYD--PDFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred HHhcCcC--cccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 6677775 4578899999999999999999999999875
No 8
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-78 Score=752.05 Aligned_cols=841 Identities=22% Similarity=0.271 Sum_probs=462.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHh-hhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRI-DRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1226)
+..++....+++++++..+. +...- ..--..-...+|+|+||+++|..
T Consensus 314 f~~a~~aa~~I~~~i~~~~~-----i~~~~~~~~~~~~~~g~ief~nV~FsYPs-------------------------- 362 (1228)
T KOG0055|consen 314 FAKARAAAYRIFETIDRKPS-----IDPYSKGGRVLSSIKGEIEFRNVCFSYPS-------------------------- 362 (1228)
T ss_pred HhccccchHHHHHHhcCCCC-----CCcccccCCcccccccceEEEEEEecCCC--------------------------
Confidence 56788888999999888776 32211 11122335789999999999832
Q ss_pred hcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecC
Q 000913 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1226)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q 233 (1226)
+ ++..||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|+++|.++.++.. +.++|.|+|
T Consensus 363 ----R-pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~Q 434 (1228)
T KOG0055|consen 363 ----R-PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQ 434 (1228)
T ss_pred ----C-CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeee
Confidence 3 3566999999999999999999999999999999999999999 9999999999988765 478999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000913 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1226)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1226)
+|.+| ..||+|||.|+. ++...+...++++...+ .--+..|++.+|
T Consensus 435 ePvlF-~~tI~eNI~~G~----~dat~~~i~~a~k~ana-----------------------------~~fi~~lp~g~~ 480 (1228)
T KOG0055|consen 435 EPVLF-ATTIRENIRYGK----PDATREEIEEAAKAANA-----------------------------HDFILKLPDGYD 480 (1228)
T ss_pred chhhh-cccHHHHHhcCC----CcccHHHHHHHHHHccH-----------------------------HHHHHhhHHhhc
Confidence 99655 579999999975 22333444444433221 112456889999
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcC
Q 000913 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1226)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1226)
|.||++++. |||||||||+|||||+.+|+|||||||||+||+.+...+.+.|.+.. .++|+|+.. | +..+.+.+|
T Consensus 481 T~vge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTivVa-H-RLStIrnaD 555 (1228)
T KOG0055|consen 481 TLVGERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIVVA-H-RLSTIRNAD 555 (1228)
T ss_pred ccccCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEEEe-e-ehhhhhccC
Confidence 999998885 99999999999999999999999999999999999999999999864 455666643 3 455666799
Q ss_pred cEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH--HHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhch--
Q 000913 394 DIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL--QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH-- 469 (1226)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~-- 469 (1226)
+|++|++|+||+.|+++|++.. ..-.++.+ |+.....+. ..+. .. ...+.....+.+.
T Consensus 556 ~I~v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~---~~----~~~~~~~s~~~s~~~ 617 (1228)
T KOG0055|consen 556 KIAVMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEE---ES----LKEERSRSLKSSSSS 617 (1228)
T ss_pred EEEEEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-cccc---cc----hhhhhhhcccccccc
Confidence 9999999999999999999862 11112222 122211110 0000 00 0000000000000
Q ss_pred ----hhhhhHHhh-cCCccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH-------HHHH
Q 000913 470 ----VGQKISDEL-RTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFV-------AVVY 537 (1226)
Q Consensus 470 ----~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~-------ali~ 537 (1226)
......... ..+.++....+ ..... .+.-+.|-+.+.+.++.+.+...+..++. ++++
T Consensus 618 ~~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~--------~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~ 687 (1228)
T KOG0055|consen 618 PSLSRGSNRSNLLSVKPEGEDPEEP--VSEED--------EKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVF 687 (1228)
T ss_pred ccccCCccccccccccccccccccc--ccccc--------ccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 000000000 00000000000 00111 22233444455555555544444333332 3333
Q ss_pred HHHHhccc-CCCcccccccchhhHHHHHHHHHHH--hHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHH
Q 000913 538 MTLFLRTK-MHKDTVTDGGIFAGATFFAITMVNF--NGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFL 614 (1226)
Q Consensus 538 gtlf~~~~-~~~~~~~~~~~~~g~lff~l~~~~~--~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~ 614 (1226)
+.++--.. .+.+........+.++|..+....+ +.+......+..- .+..++-
T Consensus 688 s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge--------------------~Lt~R~R---- 743 (1228)
T KOG0055|consen 688 SQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGE--------------------KLTKRLR---- 743 (1228)
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHH----
Confidence 32221101 1111111111123333333222111 1001111111000 0011111
Q ss_pred HHHHHHHHhhhcccCcCch---hHHHHHHHHHH-----HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhccc
Q 000913 615 EVAVWVFLSYYVVGYDSNA---GRFFKQYALLL-----GVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFIL 686 (1226)
Q Consensus 615 ~~~i~~~i~Y~~~gl~~~~---~~f~~~~l~~~-----~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i 686 (1226)
...|..+++.=+++-.+. ++....+...- ++..-...+...++++.-.+.+|...+|-+.++++.+..+++
T Consensus 744 -~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~ 822 (1228)
T KOG0055|consen 744 -SMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLI 822 (1228)
T ss_pred -HHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222222222221111 22222222111 111112223333444444455555555544333332221111
Q ss_pred CccchhHHHHHHHhHcH---HHHHHHHHHHHhhcCCccccccCCCccchhhhhhhccCc-------ccccchhHHHHHHH
Q 000913 687 SREDIKKWWKWAYWCSP---LTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGF-------FAHEYWYWLGLGAL 756 (1226)
Q Consensus 687 ~~~~ip~~~~W~~~isp---~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~-------~~~~~~~w~~~g~l 756 (1226)
-..-+.. +++.-.+. -.|.-.+-+++|-..+-... ...+....++..+.- ..-....|.+++.-
T Consensus 823 ~~~~~~~--~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV----~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~ 896 (1228)
T KOG0055|consen 823 LSGYLQK--KFLKGFSKDDKKAYEEASKIAIEAVSNIRTV----AALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFG 896 (1228)
T ss_pred HHHHHHH--HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHH----HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 00000000 00111111111111000000 000001111111100 00011234444333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhh
Q 000913 757 FGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAE 836 (1226)
Q Consensus 757 ~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (1226)
+...++| +.+.++++|-..+-............. ..+..+++..........|.-..+...........+
T Consensus 897 ~sqs~~~-~~~A~~f~~G~~Li~~g~~~~~~~~~v---------f~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~d 966 (1228)
T KOG0055|consen 897 FSQSLLF-FVYALSFWYGARLISNGEMTFEDVFRV---------FMALSFTAMALGQASSYAPDISKAKIAAGSIFEILD 966 (1228)
T ss_pred HHHHHHH-HHHHHHHHHhHHHHhcCCcCHHHHHHH---------HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhc
Confidence 3333222 223334443222111111100000000 000000000000000011111000000000000000
Q ss_pred hhc--CCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhh
Q 000913 837 AEA--SRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVL 914 (1226)
Q Consensus 837 ~~~--~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L 914 (1226)
..+ +.....+...|.....++|+||.+.||..+ +.++|+|+|+++++|+.+||||||||||||.+.+|
T Consensus 967 r~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LL 1036 (1228)
T KOG0055|consen 967 RKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLL 1036 (1228)
T ss_pred CCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHH
Confidence 111 111112222344456899999999998654 46799999999999999999999999999999999
Q ss_pred cCCCCCceEEEEEEEcCccCCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcC
Q 000913 915 AGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE 991 (1226)
Q Consensus 915 ~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~ 991 (1226)
-+... +..|.|.|||.+++. ..+|+++|.|.|+|.++. -|++||+.|+ . . +++.++ +.++++..+
T Consensus 1037 eRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG--~--~-~vs~~e----Ii~Aak~AN 1104 (1228)
T KOG0055|consen 1037 ERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYG--S--E-EVSEEE----IIEAAKLAN 1104 (1228)
T ss_pred HHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhcc--C--C-CCCHHH----HHHHHHHhh
Confidence 88765 678999999998754 457889999999999986 6999999997 1 1 133332 444444443
Q ss_pred -------CCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEe
Q 000913 992 -------LNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTI 1064 (1226)
Q Consensus 992 -------l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~ 1064 (1226)
|.+=.|+.+|..| ..||||||||++|||||++||+||+|||.||.||+++.+.|+++|.+.. .|||.|+++
T Consensus 1105 aH~FI~sLP~GyDT~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIA 1182 (1228)
T KOG0055|consen 1105 AHNFISSLPQGYDTRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIA 1182 (1228)
T ss_pred hHHHHhcCcCcccCccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEe
Confidence 3445678888765 4799999999999999999999999999999999999999999999874 689999999
Q ss_pred cCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1065 HQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1065 H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|++| ..+.+|.|.++++ |++++.|.
T Consensus 1183 HRLS--TIqnaD~I~Vi~~-G~VvE~Gt 1207 (1228)
T KOG0055|consen 1183 HRLS--TIQNADVIAVLKN-GKVVEQGT 1207 (1228)
T ss_pred cchh--hhhcCCEEEEEEC-CEEEeccc
Confidence 9987 5788999999986 79999997
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-77 Score=742.83 Aligned_cols=560 Identities=23% Similarity=0.364 Sum_probs=473.5
Q ss_pred ccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCC
Q 000913 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1226)
.++++|+||+|.++||.+|||||+|||||||||++|||+... +.++|+|++||.+.++...+|.+|||.|+|.|.+++|
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~-G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTG-GYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCccc-ceEEeEEEECCeeCchhhhccccceeecccccCcccc
Confidence 567799999999999999999999999999999999999865 4689999999999987777899999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|||.|.|+|.++.+... ..++....+|++++.++|++++|.+||+.+ +
T Consensus 881 VrESL~fSA~LRlp~~v-------------------------------~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~ 928 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKEV-------------------------------SDEEKYEYVEEVIELLELKEYADALVGLPG-S 928 (1391)
T ss_pred hHHHHHHHHHHcCCCcC-------------------------------CHHHHHHHHHHHHHHhCchhhhhhhccCCC-C
Confidence 99999999988743211 122334679999999999999999999998 9
Q ss_pred CCChhHhhHHHHHHHHhcCC-ccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc-C
Q 000913 323 GISGGQKKRVTTGEMMVGPA-LALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS-D 400 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p-~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~-~ 400 (1226)
|||.+||||++||..|+.+| .||||||||||||+.++..|++.+|+++. .|.|++|+||||+..+++.||++++|. +
T Consensus 929 GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 929 GLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred CCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999 99999999999999999999999999997 789999999999999999999999997 6
Q ss_pred CeEEEecChh----HHHHHHHhcC-CCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhH
Q 000913 401 GQIVYQGPRE----LVLEFFASMG-FRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKIS 475 (1226)
Q Consensus 401 G~iv~~G~~~----~~~~~F~~~G-f~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~ 475 (1226)
|++||.||.. .+++||++.| .+||+..|||||+.|+.+...+.. ...++++.|++|..++++.
T Consensus 1008 GqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 1008 GQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred CeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHH
Confidence 8999999874 4677999987 999999999999999987643321 1237889999999888776
Q ss_pred Hhhc---CCccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccc
Q 000913 476 DELR---TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVT 552 (1226)
Q Consensus 476 ~~l~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~ 552 (1226)
+++. .+... ..........|+.++|.|++.|++|++...||++.+...|++..++.++++|+.||+.+ .+.+
T Consensus 1076 e~v~~l~~~~~~--~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g---~~~q 1150 (1391)
T KOG0065|consen 1076 ELVKELSQPPPG--FSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVG---HNVQ 1150 (1391)
T ss_pred HHHHHHhcCCcc--CCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecC---CcHH
Confidence 6543 33332 12222345568899999999999999999999999999999999999999999999877 3456
Q ss_pred cccchhhHHHHHHHHHHHhHHH-HHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcC
Q 000913 553 DGGIFAGATFFAITMVNFNGFS-EISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDS 631 (1226)
Q Consensus 553 ~~~~~~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~ 631 (1226)
+.+..++++|.++++...+... ..+..-.++-++||||..++|+..+|+++..++++|+.++.+.+|.++.||++||..
T Consensus 1151 ~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~ 1230 (1391)
T KOG0065|consen 1151 GLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYW 1230 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchh
Confidence 6777888888888776654444 444555688899999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHH
Q 000913 632 NAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAI 711 (1226)
Q Consensus 632 ~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al 711 (1226)
++.+|+.+++..+...+....++.++.+++||..+|..+.++++.++.+|+||+.++..||.||+|+||+||+.|..+++
T Consensus 1231 ~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gl 1310 (1391)
T KOG0065|consen 1231 TASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGL 1310 (1391)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCccccccCC-------CccchhhhhhhccC----cccccchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000913 712 VANEFLGHSWKKFTQD-------SSETLGVQVLKSRG----FFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLD 775 (1226)
Q Consensus 712 ~~nef~~~~~~~~~~~-------~~~~~G~~~L~~~~----~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~ 775 (1226)
+...+++..-.|...+ ...+.|...-..++ +..+..- ....+.++|.+.+.+++.+..+|.+
T Consensus 1311 i~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a--~~~c~~c~y~v~~~~l~~f~~~y~~ 1383 (1391)
T KOG0065|consen 1311 ISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLA--TTACVYCAYTVADAFLAAFNIKYLN 1383 (1391)
T ss_pred HHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcc--eeEEEEeeeehHHHHHHHHHHHHHH
Confidence 9999998766654322 33455655554445 3222111 0111233344555555555555543
No 10
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1e-74 Score=771.31 Aligned_cols=577 Identities=24% Similarity=0.356 Sum_probs=473.3
Q ss_pred cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHH
Q 000913 116 KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLL 195 (1226)
Q Consensus 116 ~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 195 (1226)
...++|+||++.+.. ++.++.+|+|||+.++||++++|+|||||||||||
T Consensus 757 ~~~l~~~nl~~~~~~------------------------------~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL 806 (1394)
T TIGR00956 757 EDIFHWRNLTYEVKI------------------------------KKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLL 806 (1394)
T ss_pred CceEEEEeeEEEecC------------------------------CCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHH
Confidence 345899999988732 12235699999999999999999999999999999
Q ss_pred HHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCC
Q 000913 196 LALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1226)
Q Consensus 196 ~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1226)
++|+|+.++....+|+|++||+++.. ..++.++||+|+|.+++.+||+|||.|+++++.+...
T Consensus 807 ~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~---------------- 869 (1394)
T TIGR00956 807 NVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSV---------------- 869 (1394)
T ss_pred HHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCC----------------
Confidence 99999987321227999999998753 3467899999999999999999999999876532110
Q ss_pred CCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCc-cceeecCCCCC
Q 000913 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPAL-ALFMDEISTGL 354 (1226)
Q Consensus 276 ~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~-vllLDEptsgL 354 (1226)
..++....++++++.+||++++|+.||+.+. +|||||||||+||++|+.+|+ |||||||||||
T Consensus 870 ---------------~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgL 933 (1394)
T TIGR00956 870 ---------------SKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGL 933 (1394)
T ss_pred ---------------CHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCC
Confidence 0011223578899999999999999997544 799999999999999999997 99999999999
Q ss_pred CHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC-eEEEecCh----hHHHHHHHhcCC-CCCCCCC
Q 000913 355 DSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG-QIVYQGPR----ELVLEFFASMGF-RCPKRKG 428 (1226)
Q Consensus 355 Ds~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G-~iv~~G~~----~~~~~~F~~~Gf-~cp~~~~ 428 (1226)
|+.++..|++.|+++++ .+.|+|+++|||...+++.||+|++|++| +++|+|+. +++.+||+++|+ +||++.|
T Consensus 934 D~~~~~~i~~~L~~la~-~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~N 1012 (1394)
T TIGR00956 934 DSQTAWSICKLMRKLAD-HGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIINYFEKHGAPKCPEDAN 1012 (1394)
T ss_pred CHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHHHHHhcCCCCCCCCCC
Confidence 99999999999999875 57899999999988888999999999987 99999997 578999999996 9999999
Q ss_pred hHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhc---CCccccchhhccccccccCCcHHHHH
Q 000913 429 VADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR---TPFDKSKSHRAALTTETYGVGKRELL 505 (1226)
Q Consensus 429 ~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~s~~~~~ 505 (1226)
||||+.++.+...... ...++.+.|+.+...+...+++. .+..............+|..+++.|+
T Consensus 1013 pAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~ 1080 (1394)
T TIGR00956 1013 PAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAASLWYQF 1080 (1394)
T ss_pred HHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCCHHHHH
Confidence 9999999876432110 01235556666555444333221 11110000000112246889999999
Q ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHHhhchh
Q 000913 506 KANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPV 585 (1226)
Q Consensus 506 ~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~v 585 (1226)
+.+++|.++..+|++.+...|+++.+++|+++|++|++.+.+ ..+.+..+|++|+.+++..+.....++.++.++++
T Consensus 1081 ~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~ 1157 (1394)
T TIGR00956 1081 KLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQGLQNQMFAVFMATVLFNPLIQQYLPPFVAQRDL 1157 (1394)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 999999999999999999999999999999999999987643 34566778888888776666555667777777777
Q ss_pred h-HHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhH-------HHHHHHHHHHHHHHHHHHHHHH
Q 000913 586 F-YKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGR-------FFKQYALLLGVNQMASALFRFI 657 (1226)
Q Consensus 586 f-~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~-------f~~~~l~~~~~~~~~~~l~~~i 657 (1226)
| +|||..++|++++|++++.+.++|+.++.+++|.+++|||+|+.+++.. |+.+++++++...++.+++.++
T Consensus 1158 ~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~ 1237 (1394)
T TIGR00956 1158 YEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFSTLGQMV 1237 (1394)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 9999999999999999999999999999999999999999999988765 9999999999999999999999
Q ss_pred HHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCccccccC-----------
Q 000913 658 AVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQ----------- 726 (1226)
Q Consensus 658 a~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~----------- 726 (1226)
++++++..+|..++++++.++++|+||+++.++||.||+|++|+||++|++++++.|||.+....|...
T Consensus 1238 ~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~ 1317 (1394)
T TIGR00956 1238 ISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELLTFNPPSGQ 1317 (1394)
T ss_pred HHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCccccceecCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999887655321
Q ss_pred --------------------CC---c----cchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000913 727 --------------------DS---S----ETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFL 774 (1226)
Q Consensus 727 --------------------~~---~----~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~ 774 (1226)
+. + ...|.++|+.+++..++ .|.+++++++|++++ ++.++++.|.
T Consensus 1318 tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~--~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1318 TCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSG--RWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred CHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccc--cccchhhhhHHHHHH-HHHHHhhheE
Confidence 00 1 23678888887775544 588999999998887 6666667664
No 11
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.7e-72 Score=742.84 Aligned_cols=216 Identities=27% Similarity=0.409 Sum_probs=189.6
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++. +++.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 5889999887741 12579999999999999999999999999999999999876 5689999999886
Q ss_pred Ch--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000913 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1226)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGq 1012 (1226)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+++++.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2345679999999999999999999998877653 233445667889999999999888875 4699999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
||||+||+||+.+|+||||||||+|||+.+++.+++.|+++.++|+|||+|||+++ ++..+|||+++|.+ |+++..|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999987 68889999999986 79999998
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 2154 ~ 2154 (2272)
T TIGR01257 2154 I 2154 (2272)
T ss_pred H
Confidence 5
No 12
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-70 Score=698.33 Aligned_cols=808 Identities=20% Similarity=0.270 Sum_probs=447.3
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.-++..+++|+.+.+..+.. -.+...+...+.+...+.++|.+++=+.
T Consensus 483 ~vqa~VS~~Ri~~fl~~~e~-----~~~~~~~~~~~~~~~~i~i~~~sfsW~~--------------------------- 530 (1381)
T KOG0054|consen 483 LVQAKVSLKRLKEFLLSEEL-----DPDSVERSPDEAGENAIEIKNGSFSWDS--------------------------- 530 (1381)
T ss_pred HHHHHHHHHHHHHHhcCccc-----CccccccCCCCCCCceEEEeeeeEecCC---------------------------
Confidence 34678888888887766543 1111122344455667888888877432
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNH 237 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~ 237 (1226)
....+.|+|||+.|++|+++||+||.|||||+||.+|.|.++.. +|+|.++|. ++||+|++ |
T Consensus 531 ----~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~gs----------iaYv~Q~p-W 592 (1381)
T KOG0054|consen 531 ----ESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNGS----------VAYVPQQP-W 592 (1381)
T ss_pred ----CCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcCe----------EEEecccc-H
Confidence 12223899999999999999999999999999999999999876 999999984 99999976 6
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
+.+.||||||.|+..+. ..+|+...++|..+++.++.|++| .|.||
T Consensus 593 I~ngTvreNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIG 638 (1381)
T KOG0054|consen 593 IQNGTVRENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIG 638 (1381)
T ss_pred hhCCcHHHhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceec
Confidence 66789999999998764 578999999999998887777776 59999
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHH-HHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~-~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
++++ +||||||||+++|||++++++|++||+|.|++|+++..+|++ |++.+. .++|+|++ +| ..+....+|.|+
T Consensus 639 ErGi-nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILV-TH-ql~~L~~ad~Ii 713 (1381)
T KOG0054|consen 639 ERGI-NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILV-TH-QLQFLPHADQII 713 (1381)
T ss_pred CCcc-CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEE-eC-chhhhhhCCEEE
Confidence 9998 599999999999999999999999999999999999999995 775432 45666664 44 578889999999
Q ss_pred EEcCCeEEEecChhHHHH---HHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhh
Q 000913 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQK 473 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~ 473 (1226)
+|++|+|+..|+++|+.+ .|+++ .. +.....+.. .....+.......+. +. +.......
T Consensus 714 vl~~G~I~~~Gty~el~~~~~~~~~l-~~------------~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~ 775 (1381)
T KOG0054|consen 714 VLKDGKIVESGTYEELLKSGGDFAEL-AH------------EEESEQEEE---ASEKDLESGESSRES-ES-RSLESLSS 775 (1381)
T ss_pred EecCCeEecccCHHHHHhcchhHHHH-hh------------ccchhhccc---cccccccccccccch-hh-hhhhhhcc
Confidence 999999999999999973 33332 00 000000000 000000000000000 00 00000000
Q ss_pred hHHhhcCCccccchhhc-cccccccCCcHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHH-HHHHHHHHHhcccCCCc-
Q 000913 474 ISDELRTPFDKSKSHRA-ALTTETYGVGKRELLKANISRELLLMKRNSFVYI-FKLIQIAF-VAVVYMTLFLRTKMHKD- 549 (1226)
Q Consensus 474 ~~~~l~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~-~r~~~~~~-~ali~gtlf~~~~~~~~- 549 (1226)
..+. . ...+...... .......+.-.|.-. ..+.....-..... .-+..... +..+....|+..+.+..
T Consensus 776 ~~~~-~-~~~~~~~~~~~~~ee~~~G~v~~~vY-----~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~ 848 (1381)
T KOG0054|consen 776 EEEK-S-KDEKEEEDKLVQEEERETGKVSWSVY-----KKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGE 848 (1381)
T ss_pred cccc-c-ccccchhhHHHHHHHHhcCEeeHHHH-----HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 0000 0 0000000000 000000010011110 11111100111111 11111111 11122222322222211
Q ss_pred --cc--ccccch----hhHHHHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHH
Q 000913 550 --TV--TDGGIF----AGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVF 621 (1226)
Q Consensus 550 --~~--~~~~~~----~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~ 621 (1226)
.. .+...| ..+.+...++.++.++......+.....++. -+-+.+++.|++|+++
T Consensus 849 ~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~------------~ml~~Ilrapm~FFdt----- 911 (1381)
T KOG0054|consen 849 DNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHD------------KLLNSILRAPMSFFDT----- 911 (1381)
T ss_pred cccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHhCcchhcCC-----
Confidence 00 111112 1111222222222222221111111111111 1234455667666654
Q ss_pred HhhhcccCcCchhHHHHHHHHHHHH---------HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchh
Q 000913 622 LSYYVVGYDSNAGRFFKQYALLLGV---------NQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIK 692 (1226)
Q Consensus 622 i~Y~~~gl~~~~~~f~~~~l~~~~~---------~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip 692 (1226)
...||.+..|...... ..+...+..+++.+ .+++...-.+++.++.++..
T Consensus 912 ---------TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~---~vi~~~~P~fli~~~pl~v~--------- 970 (1381)
T KOG0054|consen 912 ---------TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGIL---VVISYVTPWFLIAIIPLGVI--------- 970 (1381)
T ss_pred ---------CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHH---HHhhHHhHHHHHHHHHHHHH---------
Confidence 3457766665432211 11111222221111 11111111111111111111
Q ss_pred HHHHHHHhHcHHHHHHHHHHHHhhcCCcccccc-CCCccchhhhhhhccCccc--------------------ccchhHH
Q 000913 693 KWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFT-QDSSETLGVQVLKSRGFFA--------------------HEYWYWL 751 (1226)
Q Consensus 693 ~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~-~~~~~~~G~~~L~~~~~~~--------------------~~~~~w~ 751 (1226)
||.--..|.-.+--.....+....... ..+....|...++.++-.. .....|+
T Consensus 971 ------~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWl 1044 (1381)
T KOG0054|consen 971 ------YYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWL 1044 (1381)
T ss_pred ------HHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 111111111111111111111100000 0001112333333333110 0112354
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCccccc-----ccCCCCCCCCCCCCCCcccc
Q 000913 752 GLGA--LFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLS-----TLGGSSNHNTRSGSTDDIRG 824 (1226)
Q Consensus 752 ~~g~--l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 824 (1226)
++-. +...++++. ... ++-.......+ +.+++. .+++...+..+. ..+.++
T Consensus 1045 a~Rle~ig~~~v~~~-al~-~vl~~~~~~~~------------------g~vGLslsyal~lt~~l~~~vR~--~~elEn 1102 (1381)
T KOG0054|consen 1045 AVRLELLGNLVVLIA-ALF-AVLLPSGLISP------------------GLVGLSLSYALQLTGLLQWLVRQ--SSELEN 1102 (1381)
T ss_pred HHHHHHHHHHHHHHH-HHH-HHHccCCCCCc------------------chHHHHHHHHHHHHHHHHHHHHH--HHHHHh
Confidence 4322 211211111 111 11111100000 000000 000000000000 000111
Q ss_pred cccccchhh---hhhhhcCCCcCCCCccCC--CCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEE
Q 000913 825 QQSSSQSLS---LAEAEASRPKKKGMVLPF--EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTAL 899 (1226)
Q Consensus 825 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al 899 (1226)
.+.++++.. ....+...........+. ....++|+|++.+|.. +-..+|+|||++|+|||++||
T Consensus 1103 ~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGI 1171 (1381)
T KOG0054|consen 1103 NMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGI 1171 (1381)
T ss_pred cchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEE
Confidence 111111111 101111111111111122 2357999999877752 224699999999999999999
Q ss_pred EccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCH
Q 000913 900 MGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDS 976 (1226)
Q Consensus 900 ~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~ 976 (1226)
+|++|||||||+++|.+... +.+|.|.|||.++.+ ..+|+.++.+||||.++. -|||.|| |+..
T Consensus 1172 VGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~ 1238 (1381)
T KOG0054|consen 1172 VGRTGAGKSSLILALFRLVE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFD 1238 (1381)
T ss_pred eCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceec-Ccccccc----------Cccc
Confidence 99999999999999998876 468999999998765 467888999999998765 3555544 5666
Q ss_pred HHHHHHHHHHHHHcCCCcccccccC------CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 000913 977 ETRKMFIDEVMELVELNPLRQSLVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV 1050 (1226)
Q Consensus 977 ~~~~~~v~~~l~~l~l~~~~~~~~g------~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l 1050 (1226)
+..++.++++||.++|.+...++.+ .++..++|-||||.+|+||||+++++||+|||+|+++|+++...|+++|
T Consensus 1239 e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tI 1318 (1381)
T KOG0054|consen 1239 EYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTI 1318 (1381)
T ss_pred ccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHH
Confidence 6777889999999999876544332 2356799999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1051 RNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1051 ~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|+-.+ +||||++.|+.+. + .-+|||+||++ |+++.+|.+
T Consensus 1319 R~~F~-dcTVltIAHRl~T-V-md~DrVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1319 REEFK-DCTVLTIAHRLNT-V-MDSDRVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred HHHhc-CCeEEEEeeccch-h-hhcCeEEEeeC-CeEeecCCh
Confidence 99764 7999999999874 4 45899999997 799999986
No 13
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.7e-68 Score=716.34 Aligned_cols=211 Identities=22% Similarity=0.304 Sum_probs=179.0
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 46999999999852 12359999999999999999999999999999999999876 568999999998
Q ss_pred CCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
+.+ ..+|+.++||||++.++.. |++|||.+.. ..+ ++.++++++..++.+.. |+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 754 4678889999999999875 9999997531 122 34478888888876543 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
..+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999985 4899999999986 4566999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++.+|+.
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 799999985
No 14
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.2e-68 Score=713.17 Aligned_cols=217 Identities=19% Similarity=0.305 Sum_probs=180.2
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc------------
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 921 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~------------ 921 (1226)
..++|+||+|+|+.. ++..+|+|+||+|+||+++||+||||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999999632 1246999999999999999999999999999999999976631
Q ss_pred ----------------------------------------eEEEEEEEcCccCCh---hhhcceeeEeecCCCCCCCCCH
Q 000913 922 ----------------------------------------YITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTI 958 (1226)
Q Consensus 922 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv 958 (1226)
+.+|+|.+||.++.+ ..+++.+|||+|++.++. .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 147999999998643 567889999999998885 799
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000913 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1226)
Q Consensus 959 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~L 1031 (1226)
+|||.|+. ++.+. +.++++++..++.++ .|+.+|.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 22333 347777777776553 36677754 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCeEEEEecC---cE-EEEeCCC
Q 000913 1032 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GQ-EIYVGPL 1093 (1226)
Q Consensus 1032 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G---g~-~~y~G~~ 1093 (1226)
|||||+||+.+.+.|++.|+++. .+|+|+|+++|+++ ..+.+|+|++|++| |+ ++..|+-
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 36899999999985 56789999999973 66 4578873
No 15
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.1e-67 Score=708.55 Aligned_cols=211 Identities=20% Similarity=0.275 Sum_probs=178.8
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++|+||+++|+. +.+.+|+|||++|+|||.+||+|+||||||||+++|.|... +.+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999876 568999999998
Q ss_pred CCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
+.+ ..+++.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 753 4678889999999998875 9999997531 122 33478888888886543 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
..+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4899999999986 4566999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 799999975
No 16
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.1e-67 Score=615.77 Aligned_cols=491 Identities=26% Similarity=0.332 Sum_probs=378.0
Q ss_pred eEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHH
Q 000913 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1226)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1226)
=++.+||++++... .....+++||||.+.|||+++|+|.|||||||+.++
T Consensus 5 lL~V~nL~v~~~~~------------------------------~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~ 54 (539)
T COG1123 5 LLEVENLTVEFATD------------------------------GGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALA 54 (539)
T ss_pred eEEEeceEEEEecC------------------------------CcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHH
Confidence 47899999998652 122569999999999999999999999999999999
Q ss_pred HhcCCCCC-CCceeEEEEcCccCCCCCc-------cceEEEecCCC--CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHH
Q 000913 198 LAGKLDPT-LKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELA 267 (1226)
Q Consensus 198 L~G~~~~~-~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~ 267 (1226)
|.|.+++. ...+|+|.++|.++..... .+.++||+|++ .+-|-+||.+-|.=..+.++...
T Consensus 55 i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~--------- 125 (539)
T COG1123 55 LMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGS--------- 125 (539)
T ss_pred HhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcccc---------
Confidence 99999986 4568999999998755543 26799999996 56777899888876554443211
Q ss_pred HHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCcccee
Q 000913 268 RREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFM 347 (1226)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllL 347 (1226)
.++...++.++|+..||++.... ++++..|||||||||.||+||+.+|++|++
T Consensus 126 ------------------------~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~rQRv~iAmALa~~P~LLIa 178 (539)
T COG1123 126 ------------------------RAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMRQRVMIAMALALKPKLLIA 178 (539)
T ss_pred ------------------------HHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHHHHHHHHHHHhCCCCEEEE
Confidence 12234456788999999986654 678899999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCC
Q 000913 348 DEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRK 427 (1226)
Q Consensus 348 DEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~ 427 (1226)
|||||+||..++.+|++.|+++.+ ..++.++.++|+..-+.+++|+|+||.+|++|+.|+.+++..-+
T Consensus 179 DEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~p----------- 246 (539)
T COG1123 179 DEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSNP----------- 246 (539)
T ss_pred CCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhcc-----------
Confidence 999999999999999999999886 45677777999999999999999999999999999999885410
Q ss_pred ChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCccccchhhccccccccCCcHHHHHHH
Q 000913 428 GVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKA 507 (1226)
Q Consensus 428 ~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 507 (1226)
..||... +.++ .|.
T Consensus 247 ----------------------~hpYT~~----Ll~a---------------~p~------------------------- 260 (539)
T COG1123 247 ----------------------QHPYTRG----LLAA---------------VPR------------------------- 260 (539)
T ss_pred ----------------------CCcccHH----HHhh---------------CCC-------------------------
Confidence 0111000 0000 000
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhH
Q 000913 508 NISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFY 587 (1226)
Q Consensus 508 ~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~ 587 (1226)
....
T Consensus 261 --------------------------------------~~~~-------------------------------------- 264 (539)
T COG1123 261 --------------------------------------LGDE-------------------------------------- 264 (539)
T ss_pred --------------------------------------cccc--------------------------------------
Confidence 0000
Q ss_pred HhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Q 000913 588 KQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVA 667 (1226)
Q Consensus 588 kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA 667 (1226)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCccccccCCCccchhhhhhhccCcccccc
Q 000913 668 NTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEY 747 (1226)
Q Consensus 668 ~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~ 747 (1226)
..
T Consensus 265 ------------------------------------------------------~~------------------------ 266 (539)
T COG1123 265 ------------------------------------------------------KI------------------------ 266 (539)
T ss_pred ------------------------------------------------------cc------------------------
Confidence 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCCCCCCCccccccc
Q 000913 748 WYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQS 827 (1226)
Q Consensus 748 ~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (1226)
. .. +
T Consensus 267 -----------------------------------------------~-------------------~~--~-------- 270 (539)
T COG1123 267 -----------------------------------------------I-------------------RL--P-------- 270 (539)
T ss_pred -----------------------------------------------c-------------------cc--c--------
Confidence 0 00 0
Q ss_pred ccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcH
Q 000913 828 SSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGK 907 (1226)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGK 907 (1226)
. .. ..+ ...-++.+|++..+..++.+. . ...+...+++||||++++||++||+|+|||||
T Consensus 271 ----~------------~~-~~~-~~~ll~V~~l~k~y~~~~~~~-~-~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGK 330 (539)
T COG1123 271 ----R------------RG-PLR-AEPLLSVRNLSKRYGSRKGLF-V-RERGEVKAVDDVSFDLREGETLGLVGESGSGK 330 (539)
T ss_pred ----c------------cc-ccc-cCceeEeeeeeeeeccccccc-c-ccccceeeeeeeeeEecCCCEEEEECCCCCCH
Confidence 0 00 000 011245566655554332111 0 00134579999999999999999999999999
Q ss_pred HHHHhhhcCCCCCceEEEEEEEcCccC--C---hhhhcceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHH
Q 000913 908 TTLMDVLAGRKTGGYITGNITISGYPK--K---QETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRK 980 (1226)
Q Consensus 908 TTLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~ 980 (1226)
|||.++|+|+.. +..|.|.++|.+. + ....++.+-+++||+. +.|.+||++.+.-....... ....+++
T Consensus 331 STlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~--~~~~~~~ 406 (539)
T COG1123 331 STLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG--GSGAERR 406 (539)
T ss_pred HHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--cchHHHH
Confidence 999999999987 4689999999762 1 1234556778888864 67899999999876444332 2356677
Q ss_pred HHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CC
Q 000913 981 MFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GR 1058 (1226)
Q Consensus 981 ~~v~~~l~~l~l~~-~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~ 1058 (1226)
++|.++++.++|.+ +.+++ +.+||||||||++|||||+.+|++|++|||||.||+..+..|.++|+++.++ |.
T Consensus 407 ~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~ 481 (539)
T COG1123 407 ARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGL 481 (539)
T ss_pred HHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCC
Confidence 88999999999986 56665 4579999999999999999999999999999999999999999999999755 99
Q ss_pred EEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1059 TVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1059 tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|.|++|||... +.+.|||+++|.+ |++|..||.
T Consensus 482 t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 482 TYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred EEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 99999999975 7889999999986 799999974
No 17
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.7e-64 Score=681.21 Aligned_cols=211 Identities=18% Similarity=0.209 Sum_probs=179.0
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++|+||+++|+.. ...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 469999999999632 1359999999999999999999999999999999999876 568999999998
Q ss_pred CCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
+.+ ..+++.++||||++.++.. |++|||.... +.+ ++.++++++.+++.+.. |+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 754 4678889999999999875 9999996211 222 23478889988886543 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
..+||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 36799999999999999999999999999999999999999999999875 4899999999986 4667999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 799999985
No 18
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-66 Score=630.47 Aligned_cols=456 Identities=21% Similarity=0.294 Sum_probs=347.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1226)
.+|+|||+.+++|++++|+|||||||||||++|+|.++| + +|+|.++|.++..... ++.++||+|++.+++
T Consensus 19 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 95 (506)
T PRK13549 19 KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALVK 95 (506)
T ss_pred EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC
Confidence 499999999999999999999999999999999999986 5 9999999998765432 356999999988899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.|+......+.. . ..+....++.+++.+||++..+..+
T Consensus 96 ~~tv~e~l~~~~~~~~~~~~-~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 141 (506)
T PRK13549 96 ELSVLENIFLGNEITPGGIM-D------------------------------YDAMYLRAQKLLAQLKLDINPATPV--- 141 (506)
T ss_pred CCcHHHHhhhcccccccCCc-C------------------------------HHHHHHHHHHHHHHcCCCCCcccch---
Confidence 99999999987532110000 0 0001124567899999987777655
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++++ . +++||.++|+..++.+++|+|++|+
T Consensus 142 --~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~ 217 (506)
T PRK13549 142 --GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIR 217 (506)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEE
Confidence 46999999999999999999999999999999999999999999999854 3 4455667888899999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhc
Q 000913 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~ 479 (1226)
+|++++.|+.+++.. .+..+.
T Consensus 218 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 238 (506)
T PRK13549 218 DGRHIGTRPAAGMTE--------------------------------------------DDIITM--------------- 238 (506)
T ss_pred CCEEeeecccccCCH--------------------------------------------HHHHHH---------------
Confidence 999998876432100 000000
Q ss_pred CCccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhh
Q 000913 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1226)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1226)
++ + .. .
T Consensus 239 -------------------------------------------------------------~~--~--~~-~-------- 244 (506)
T PRK13549 239 -------------------------------------------------------------MV--G--RE-L-------- 244 (506)
T ss_pred -------------------------------------------------------------hh--C--cC-c--------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHH
Q 000913 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1226)
Q Consensus 560 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~ 639 (1226)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCC
Q 000913 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1226)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 719 (1226)
+
T Consensus 245 ----------------------------------------------------~--------------------------- 245 (506)
T PRK13549 245 ----------------------------------------------------T--------------------------- 245 (506)
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred ccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000913 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1226)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1226)
. . .+ .
T Consensus 246 --------------------------~--------------------------~-~~--~-------------------- 250 (506)
T PRK13549 246 --------------------------A--------------------------L-YP--R-------------------- 250 (506)
T ss_pred --------------------------c--------------------------c-cc--c--------------------
Confidence 0 0 00 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccC
Q 000913 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1226)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~ 879 (1226)
. . . . + ....++++|+++.++.. +
T Consensus 251 ----------------~---------------~------~--~-------~-~~~~l~~~~l~~~~~~~----------~ 273 (506)
T PRK13549 251 ----------------E---------------P------H--T-------I-GEVILEVRNLTAWDPVN----------P 273 (506)
T ss_pred ----------------c---------------c------c--C-------C-CCceEEEecCccccccc----------c
Confidence 0 0 0 0 0 00125566776554210 1
Q ss_pred ceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhcceeeEeecCC---CC
Q 000913 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IH 952 (1226)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~ 952 (1226)
++.+|+||||+|++||++||+||||||||||+++|+|...+ +.+|+|.++|.++.. ...++.+||++|++ .+
T Consensus 274 ~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 352 (506)
T PRK13549 274 HIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGI 352 (506)
T ss_pred ccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCC
Confidence 23589999999999999999999999999999999998641 257999999976532 12345689999985 46
Q ss_pred CCCCCHHHHHHHHHHhhcCC--CCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000913 953 SPFVTIYESLLFSAWLRLSP--EVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1029 (1226)
Q Consensus 953 ~~~lTv~E~l~f~~~lr~~~--~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il 1029 (1226)
++.+||.|++.+........ ..+.++.++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||
T Consensus 353 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~ll 427 (506)
T PRK13549 353 VPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKIL 427 (506)
T ss_pred cCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEE
Confidence 77899999998753211110 112333446688999999996 4666664 569999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 000913 1030 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1226)
Q Consensus 1030 ~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~ 1094 (1226)
||||||+|||+.++..++++|++++++|+|||++||+++ ++.+.||++++|++ |+++..|+..
T Consensus 428 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 490 (506)
T PRK13549 428 ILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINH 490 (506)
T ss_pred EEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccc
Confidence 999999999999999999999999888999999999987 57889999999986 6888888764
No 19
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2e-65 Score=626.76 Aligned_cols=449 Identities=20% Similarity=0.316 Sum_probs=344.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
++|+|+||.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK10762 18 KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQL 94 (501)
T ss_pred EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCCC
Confidence 4999999999999999999999999999999999999998 9999999988754321 35699999998899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.|+..........+ ..+....++.+++.+||++..|..++
T Consensus 95 tv~e~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~---- 140 (501)
T PRK10762 95 TIAENIFLGREFVNRFGRID------------------------------WKKMYAEADKLLARLNLRFSSDKLVG---- 140 (501)
T ss_pred cHHHHhhhccccccccCccC------------------------------HHHHHHHHHHHHHHcCCCCCccCchh----
Confidence 99999998653210000000 00112245678999999887776554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++||.++|+..++.+++|+|++|++|
T Consensus 141 -~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~G 217 (501)
T PRK10762 141 -ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRDG 217 (501)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 5999999999999999999999999999999999999999999998854 3 445666788999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcCC
Q 000913 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1226)
Q Consensus 402 ~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~~ 481 (1226)
+++..|+.+++.. .+..+.
T Consensus 218 ~i~~~~~~~~~~~--------------------------------------------~~~~~~----------------- 236 (501)
T PRK10762 218 QFIAEREVADLTE--------------------------------------------DSLIEM----------------- 236 (501)
T ss_pred EEEEecCcCcCCH--------------------------------------------HHHHHH-----------------
Confidence 9998775432100 000000
Q ss_pred ccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHH
Q 000913 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1226)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~l 561 (1226)
++ . ..
T Consensus 237 -----------------------------------------------------------~~--~--~~------------ 241 (501)
T PRK10762 237 -----------------------------------------------------------MV--G--RK------------ 241 (501)
T ss_pred -----------------------------------------------------------hc--C--CC------------
Confidence 00 0 00
Q ss_pred HHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHH
Q 000913 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1226)
Q Consensus 562 ff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l 641 (1226)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCcc
Q 000913 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1226)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~ 721 (1226)
.
T Consensus 242 -------------------------------------------------------------------------------~ 242 (501)
T PRK10762 242 -------------------------------------------------------------------------------L 242 (501)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000913 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1226)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1226)
.. . .+ .
T Consensus 243 ~~-~-------------------------------------------------~~----------------------~-- 248 (501)
T PRK10762 243 ED-Q-------------------------------------------------YP----------------------R-- 248 (501)
T ss_pred cc-c-------------------------------------------------cc----------------------c--
Confidence 00 0 00 0
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccCce
Q 000913 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1226)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1226)
. + . +..+..++++|++.
T Consensus 249 --------------~--~-------------------~----------~~~~~~l~~~~l~~------------------ 265 (501)
T PRK10762 249 --------------L--D-------------------K----------APGEVRLKVDNLSG------------------ 265 (501)
T ss_pred --------------c--c-------------------c----------CCCCcEEEEeCccc------------------
Confidence 0 0 0 00001245556541
Q ss_pred EEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhcceeeEeecCC---CCCC
Q 000913 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSP 954 (1226)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~ 954 (1226)
.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.++.. ...++.+||++|++ .+++
T Consensus 266 ~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~ 343 (501)
T PRK10762 266 PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVL 343 (501)
T ss_pred CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcC
Confidence 26999999999999999999999999999999999876 468999999977532 12345699999996 4678
Q ss_pred CCCHHHHHHHHHHhhcC---CCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000913 955 FVTIYESLLFSAWLRLS---PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1030 (1226)
Q Consensus 955 ~lTv~E~l~f~~~lr~~---~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~ 1030 (1226)
.+||.|++.+....... .....++.++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+|||
T Consensus 344 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lll 418 (501)
T PRK10762 344 GMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLI 418 (501)
T ss_pred CCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEE
Confidence 89999999875321110 0122233455688999999995 5666664 4699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCc
Q 000913 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1226)
Q Consensus 1031 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~~ 1095 (1226)
|||||+|||+.++..+++.|++++++|+|||++||++. ++.+.||++++|++ |++++.|+...
T Consensus 419 LDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 419 LDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 99999999999999999999999878999999999987 57889999999986 68998887643
No 20
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-65 Score=628.83 Aligned_cols=457 Identities=22% Similarity=0.297 Sum_probs=346.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
++|+|+||.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+
T Consensus 19 ~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 95 (510)
T PRK09700 19 HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDEL 95 (510)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24699999998899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.++...... .... + .. ...+....++.+++.+||++..++.++
T Consensus 96 tv~e~l~~~~~~~~~--~~~~--------------~--~~---------~~~~~~~~~~~~l~~~gl~~~~~~~~~---- 144 (510)
T PRK09700 96 TVLENLYIGRHLTKK--VCGV--------------N--II---------DWREMRVRAAMMLLRVGLKVDLDEKVA---- 144 (510)
T ss_pred cHHHHhhhccccccc--cccc--------------c--cc---------CHHHHHHHHHHHHHHcCCCCCcccchh----
Confidence 999999875421000 0000 0 00 000112346678999999877776554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++. .+ ++||.++|+..++..++|+|++|++|
T Consensus 145 -~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tiiivsHd~~~~~~~~d~v~~l~~G 221 (510)
T PRK09700 145 -NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-EG-TAIVYISHKLAEIRRICDRYTVMKDG 221 (510)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 6999999999999999999999999999999999999999999999865 34 45566888999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcCC
Q 000913 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1226)
Q Consensus 402 ~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~~ 481 (1226)
++++.|+++++.. .+..+.
T Consensus 222 ~i~~~g~~~~~~~--------------------------------------------~~~~~~----------------- 240 (510)
T PRK09700 222 SSVCSGMVSDVSN--------------------------------------------DDIVRL----------------- 240 (510)
T ss_pred EEeeecchhhCCH--------------------------------------------HHHHHH-----------------
Confidence 9999887653210 000000
Q ss_pred ccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHH
Q 000913 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1226)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~l 561 (1226)
+. + .. ..
T Consensus 241 -----------------------------------------------------------~~--~--~~-~~--------- 247 (510)
T PRK09700 241 -----------------------------------------------------------MV--G--RE-LQ--------- 247 (510)
T ss_pred -----------------------------------------------------------hc--C--CC-cc---------
Confidence 00 0 00 00
Q ss_pred HHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHH
Q 000913 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1226)
Q Consensus 562 ff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l 641 (1226)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCcc
Q 000913 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1226)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~ 721 (1226)
..+
T Consensus 248 ------------------------------------------------------------------------~~~----- 250 (510)
T PRK09700 248 ------------------------------------------------------------------------NRF----- 250 (510)
T ss_pred ------------------------------------------------------------------------ccc-----
Confidence 000
Q ss_pred ccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000913 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1226)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1226)
. . ..+
T Consensus 251 ~----~----------------------------------------------~~~------------------------- 255 (510)
T PRK09700 251 N----A----------------------------------------------MKE------------------------- 255 (510)
T ss_pred c----c----------------------------------------------ccc-------------------------
Confidence 0 0 000
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccCce
Q 000913 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1226)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1226)
.. . . . + .+..++++|+++.+ +
T Consensus 256 -------------~~---------------~------~---~------~-~~~~l~~~~l~~~~-------------~-- 276 (510)
T PRK09700 256 -------------NV---------------S------N---L------A-HETVFEVRNVTSRD-------------R-- 276 (510)
T ss_pred -------------cc---------------c------c---C------C-CCcEEEEeCccccC-------------C--
Confidence 00 0 0 0 0 00136667776432 1
Q ss_pred EEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhcceeeEeecC---CCCCC
Q 000913 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQN---DIHSP 954 (1226)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~ 954 (1226)
.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+|||+|+ ..+++
T Consensus 277 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 354 (510)
T PRK09700 277 KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFP 354 (510)
T ss_pred CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcC
Confidence 27999999999999999999999999999999999876 468999999976532 1234568999998 35778
Q ss_pred CCCHHHHHHHHHHhh---cCC--C-CCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000913 955 FVTIYESLLFSAWLR---LSP--E-VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1226)
Q Consensus 955 ~lTv~E~l~f~~~lr---~~~--~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~ 1027 (1226)
.+||+|++.+....+ ... . ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+
T Consensus 355 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~ 429 (510)
T PRK09700 355 NFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPE 429 (510)
T ss_pred CCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCC
Confidence 899999998753211 000 0 11223335678999999996 6677664 4699999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1028 il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
||||||||+|||+.++..+++.|++++++|.|||++|||+. ++.+.||++++|++ |++++.++.
T Consensus 430 lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 430 VIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred EEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999999999999999999999999878999999999986 57889999999986 688888764
No 21
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-65 Score=634.02 Aligned_cols=226 Identities=21% Similarity=0.233 Sum_probs=182.6
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++..... ... ....+.+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 313 ~L~~~~l~~~y~~~~~~-~~~-~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i 388 (623)
T PRK10261 313 ILQVRNLVTRFPLRSGL-LNR-VTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRI 388 (623)
T ss_pred eEEEeeeEEEEcCCCcc-ccc-cCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEEC
Confidence 37888998877421000 000 0012469999999999999999999999999999999999876 4689999999865
Q ss_pred Ch------hhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 000913 935 KQ------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1226)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 1005 (1226)
.. ..+++.++||+|++ .+++.+||.|++.+....+. ....++.++++.++++.++|. +..++. +
T Consensus 389 ~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~ 461 (623)
T PRK10261 389 DTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----P 461 (623)
T ss_pred CcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----c
Confidence 32 12356799999997 47888999999988643321 112344556789999999996 456665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
..|||||||||+||+||+.+|+||||||||+|||+.++..|+++|+++.++ |.|||++|||++ .+.+.+|++++|++
T Consensus 462 ~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~- 539 (623)
T PRK10261 462 HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL- 539 (623)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 899999999987 47889999999986
Q ss_pred cEEEEeCCC
Q 000913 1085 GQEIYVGPL 1093 (1226)
Q Consensus 1085 g~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 540 G~iv~~g~~ 548 (623)
T PRK10261 540 GQIVEIGPR 548 (623)
T ss_pred CEEEEecCH
Confidence 799999975
No 22
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.9e-64 Score=621.38 Aligned_cols=217 Identities=22% Similarity=0.325 Sum_probs=175.8
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEc-Ccc-
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS-GYP- 933 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~-g~~- 933 (1226)
++++|+++.++... .+.+.+|+|+||+|++|+++||+||||||||||+++|+|..+ +.+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISVD--------RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccCC--------CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCcc
Confidence 66778877763100 022469999999999999999999999999999999999876 458999996 532
Q ss_pred --CCh------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-----cccccc
Q 000913 934 --KKQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-----LRQSLV 1000 (1226)
Q Consensus 934 --~~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~~ 1000 (1226)
... ...++.+||++|++.+++.+||+|++.+...+. ...+..++++.++++.++|.+ ..++.
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 424 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY- 424 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-
Confidence 111 123456899999988888999999998753221 223334466889999999975 34554
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEE
Q 000913 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1079 (1226)
Q Consensus 1001 g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ 1079 (1226)
+..|||||||||+||+||+.+|+||||||||+|||+.++..+++.|++++++ |.|||++||++. .+.+.||+++
T Consensus 425 ----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~ 499 (520)
T TIGR03269 425 ----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAA 499 (520)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999999764 899999999987 4788999999
Q ss_pred EEecCcEEEEeCCC
Q 000913 1080 LMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1080 ll~~Gg~~~y~G~~ 1093 (1226)
+|++ |+++..|+.
T Consensus 500 ~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 500 LMRD-GKIVKIGDP 512 (520)
T ss_pred EEEC-CEEEEECCH
Confidence 9986 688888864
No 23
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-64 Score=619.85 Aligned_cols=452 Identities=20% Similarity=0.275 Sum_probs=342.3
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+
T Consensus 25 ~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 101 (510)
T PRK15439 25 EVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPNL 101 (510)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988765432 24699999999899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.|+.... + + ....++.+++.+||++..+..++
T Consensus 102 tv~e~l~~~~~~~------~---~-----------------------------~~~~~~~~l~~~~l~~~~~~~~~---- 139 (510)
T PRK15439 102 SVKENILFGLPKR------Q---A-----------------------------SMQKMKQLLAALGCQLDLDSSAG---- 139 (510)
T ss_pred cHHHHhhcccccc------h---H-----------------------------HHHHHHHHHHHcCCCccccCChh----
Confidence 9999998853110 0 0 01235667889999877776554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++++ . +++||.++|+..++.++||+|++|++|
T Consensus 140 -~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~G 216 (510)
T PRK15439 140 -SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRDG 216 (510)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999999864 3 445666888999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcCC
Q 000913 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1226)
Q Consensus 402 ~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~~ 481 (1226)
++++.|+++++... + ..+.+..
T Consensus 217 ~i~~~g~~~~~~~~---------------~-----------------------------~~~~~~~-------------- 238 (510)
T PRK15439 217 TIALSGKTADLSTD---------------D-----------------------------IIQAITP-------------- 238 (510)
T ss_pred EEEEecChHHcCHH---------------H-----------------------------HHHHHhC--------------
Confidence 99999877653210 0 0000000
Q ss_pred ccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHH
Q 000913 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1226)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~l 561 (1226)
+ ..... ...
T Consensus 239 ------------------------------------~--------------------------~~~~~-~~~-------- 247 (510)
T PRK15439 239 ------------------------------------A--------------------------AREKS-LSA-------- 247 (510)
T ss_pred ------------------------------------c--------------------------ccccc-ccc--------
Confidence 0 00000 000
Q ss_pred HHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHH
Q 000913 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1226)
Q Consensus 562 ff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l 641 (1226)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCcc
Q 000913 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1226)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~ 721 (1226)
... .
T Consensus 248 -------------------------------------------------~~~---------------------------~ 251 (510)
T PRK15439 248 -------------------------------------------------SQK---------------------------L 251 (510)
T ss_pred -------------------------------------------------ccc---------------------------c
Confidence 000 0
Q ss_pred ccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000913 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1226)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1226)
. ..+ +
T Consensus 252 ~-----------------~~~---------------------------------~------------------------- 256 (510)
T PRK15439 252 W-----------------LEL---------------------------------P------------------------- 256 (510)
T ss_pred c-----------------ccc---------------------------------c-------------------------
Confidence 0 000 0
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccCce
Q 000913 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1226)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1226)
.. . .. . +..+..++.+|++.
T Consensus 257 -------------~~---------------~------~~--~------~~~~~~l~~~~l~~------------------ 276 (510)
T PRK15439 257 -------------GN---------------R------RQ--Q------AAGAPVLTVEDLTG------------------ 276 (510)
T ss_pred -------------cc---------------c------cc--c------CCCCceEEEeCCCC------------------
Confidence 00 0 00 0 00011255666641
Q ss_pred EEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh----hhcceeeEeecCC---CCCC
Q 000913 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSP 954 (1226)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~ 954 (1226)
.+|+|||+++++|+++||+|||||||||||++|+|... +.+|+|.++|.++... ..++.++|++|++ .+++
T Consensus 277 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~ 354 (510)
T PRK15439 277 EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYL 354 (510)
T ss_pred CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccC
Confidence 14899999999999999999999999999999999875 4579999999765321 1235689999984 4778
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000913 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1226)
Q Consensus 955 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDE 1033 (1226)
.+|+.|++......+..........++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||
T Consensus 355 ~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDE 429 (510)
T PRK15439 355 DAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDE 429 (510)
T ss_pred CCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECC
Confidence 899999986431111110011222345688999999997 6666664 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 000913 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1226)
Q Consensus 1034 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~ 1094 (1226)
||+|||+.++..+++.|++++++|.|||+++|++. ++.+.||++++|++ |++++.|..+
T Consensus 430 Pt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 430 PTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred CCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999999999999888999999999997 58889999999985 7898888653
No 24
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.9e-64 Score=622.16 Aligned_cols=464 Identities=22% Similarity=0.291 Sum_probs=345.6
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCCCc-------cceEEEecCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d 235 (1226)
+++|+|+||.+++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 459999999999999999999999999999999999998610 128999999998754321 24699999986
Q ss_pred C--CCCCCCHHHHHHHHhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc--
Q 000913 236 N--HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-- 310 (1226)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 310 (1226)
. +++.+||+|++.+..... +.. ..+....++.+++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 4 567789999988653221 100 0011234577889999975
Q ss_pred -cccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHH
Q 000913 311 -CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETY 389 (1226)
Q Consensus 311 -~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 389 (1226)
..+.. +..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++..+ .+||.++|+..++.
T Consensus 148 ~~~~~~-----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDY-----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELN-MGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhC-----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcC-CeEEEEcCcHHHHH
Confidence 23444 456999999999999999999999999999999999999999999999865334 45566788889999
Q ss_pred hhcCcEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhch
Q 000913 390 DLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH 469 (1226)
Q Consensus 390 ~~~D~iilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~ 469 (1226)
.++|+|++|++|++++.|+++++... |. .+ ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------~~--------~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------HP--------YT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CC-------------------------CH--------HH-------
Confidence 99999999999999999877654210 00 00 00
Q ss_pred hhhhhHHhhcCCccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 000913 470 VGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKD 549 (1226)
Q Consensus 470 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~ 549 (1226)
+. ++...
T Consensus 254 -----------------------------------------~~----------------------------~~~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QK----------------------------LLNSE---- 260 (529)
T ss_pred -----------------------------------------HH----------------------------HHHhC----
Confidence 00 00000
Q ss_pred ccccccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccC
Q 000913 550 TVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGY 629 (1226)
Q Consensus 550 ~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl 629 (1226)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHH
Q 000913 630 DSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQN 709 (1226)
Q Consensus 630 ~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~ 709 (1226)
+
T Consensus 261 --------------------------------------------------------------~----------------- 261 (529)
T PRK15134 261 --------------------------------------------------------------P----------------- 261 (529)
T ss_pred --------------------------------------------------------------c-----------------
Confidence 0
Q ss_pred HHHHHhhcCCccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeecccc
Q 000913 710 AIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIE 789 (1226)
Q Consensus 710 al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~ 789 (1226)
. . .+.
T Consensus 262 -----------------~-----~-----------------------------------------~~~------------ 266 (529)
T PRK15134 262 -----------------S-----G-----------------------------------------DPV------------ 266 (529)
T ss_pred -----------------c-----c-----------------------------------------ccc------------
Confidence 0 0 000
Q ss_pred ccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccc
Q 000913 790 SNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPE 869 (1226)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~ 869 (1226)
. + . . . .+..++++|+++.++...
T Consensus 267 --------------------------~--~-------------------~---~-~------~~~~l~~~~l~~~~~~~~ 289 (529)
T PRK15134 267 --------------------------P--L-------------------P---E-P------ASPLLDVEQLQVAFPIRK 289 (529)
T ss_pred --------------------------c--c-------------------C---C-C------CCCcccccCcEEEeecCc
Confidence 0 0 0 0 0 000245566666653110
Q ss_pred hhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---h---hhccee
Q 000913 870 EMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---E---TFARIS 943 (1226)
Q Consensus 870 ~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~~~~~~ 943 (1226)
.. .++ ..+.+.+|+||||+|++|+++||+||||||||||+++|+|..+ .+|+|.++|.++.. . .+++.+
T Consensus 290 ~~-~~~-~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i 364 (529)
T PRK15134 290 GI-LKR-TVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRI 364 (529)
T ss_pred cc-ccc-ccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhce
Confidence 00 000 0012469999999999999999999999999999999999863 47999999976532 1 134568
Q ss_pred eEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHH
Q 000913 944 GYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAV 1020 (1226)
Q Consensus 944 gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSgGqrqrl~ia~ 1020 (1226)
||++|++ .+++.+||+|++.+....+.. ..+..+.++.+.++++.++|. +..+.. +..|||||||||+||+
T Consensus 365 ~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~ 438 (529)
T PRK15134 365 QVVFQDPNSSLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIAR 438 (529)
T ss_pred EEEEeCchhhcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHH
Confidence 9999996 377889999999986533211 123344456788999999997 456665 3579999999999999
Q ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1021 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1021 ~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
+|+.+|+||||||||+|||+.++..+++.|++++++ |+|||++||++. .+.+.||++++|++ |+++..|+.
T Consensus 439 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 439 ALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999865 899999999986 47788999999986 689888874
No 25
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.3e-64 Score=615.65 Aligned_cols=456 Identities=19% Similarity=0.275 Sum_probs=343.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1226)
++|+|||+.+++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.+++
T Consensus 15 ~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 15 KALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTW---DGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred EeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 499999999999999999999999999999999999986 5 8999999998765432 356999999988999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccc-cccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA-DTMVGD 318 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~ 318 (1226)
.+||+||+.|+......+.... ..+....++.+++.+||++.. +..
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGRMA------------------------------YNAMYLRAKNLLRELQLDADNVTRP--- 138 (500)
T ss_pred CCcHHHHHHhhccccccccccC------------------------------HHHHHHHHHHHHHHcCCCCCcccCc---
Confidence 9999999988643210000000 000112456789999997654 333
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
+..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|++++. . +++||.++|+..++.++||+|++|
T Consensus 139 --~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l 214 (500)
T TIGR02633 139 --VGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVI 214 (500)
T ss_pred --hhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEE
Confidence 446999999999999999999999999999999999999999999999864 3 445666888999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhh
Q 000913 399 SDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDEL 478 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l 478 (1226)
++|++++.|+.+++.. ....+
T Consensus 215 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~--------------- 235 (500)
T TIGR02633 215 RDGQHVATKDMSTMSE--------------------------------------------DDIIT--------------- 235 (500)
T ss_pred eCCeEeeecCcccCCH--------------------------------------------HHHHH---------------
Confidence 9999987664321000 00000
Q ss_pred cCCccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchh
Q 000913 479 RTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFA 558 (1226)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~ 558 (1226)
.+. + ..
T Consensus 236 -------------------------------------------------------------~~~--~--~~--------- 241 (500)
T TIGR02633 236 -------------------------------------------------------------MMV--G--RE--------- 241 (500)
T ss_pred -------------------------------------------------------------HHh--C--cc---------
Confidence 000 0 00
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHH
Q 000913 559 GATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFK 638 (1226)
Q Consensus 559 g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~ 638 (1226)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcC
Q 000913 639 QYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLG 718 (1226)
Q Consensus 639 ~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~ 718 (1226)
.+
T Consensus 242 ----------------------------------------------------~~-------------------------- 243 (500)
T TIGR02633 242 ----------------------------------------------------IT-------------------------- 243 (500)
T ss_pred ----------------------------------------------------cc--------------------------
Confidence 00
Q ss_pred CccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccC
Q 000913 719 HSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIG 798 (1226)
Q Consensus 719 ~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1226)
. . .+
T Consensus 244 ------------~----------~--------------------------------~~---------------------- 247 (500)
T TIGR02633 244 ------------S----------L--------------------------------YP---------------------- 247 (500)
T ss_pred ------------c----------c--------------------------------cc----------------------
Confidence 0 0 00
Q ss_pred CcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhccccc
Q 000913 799 GNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLE 878 (1226)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~ 878 (1226)
.. + ... ....++++|+++.+...
T Consensus 248 ----------------~~--~---------------------~~~--------~~~~l~~~~l~~~~~~~---------- 270 (500)
T TIGR02633 248 ----------------HE--P---------------------HEI--------GDVILEARNLTCWDVIN---------- 270 (500)
T ss_pred ----------------cc--c---------------------cCC--------CCceEEEeCCccccccc----------
Confidence 00 0 000 00125667776554210
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhcceeeEeecCC---C
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---I 951 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~ 951 (1226)
+++.+|+|+||++++||++||+|||||||||||++|+|..++ +.+|+|.++|.++.. ...++.+||++|+. .
T Consensus 271 ~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 349 (500)
T TIGR02633 271 PHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHG 349 (500)
T ss_pred ccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCC
Confidence 123589999999999999999999999999999999998752 147999999977532 22356789999995 4
Q ss_pred CCCCCCHHHHHHHHHHhhcC--CCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000913 952 HSPFVTIYESLLFSAWLRLS--PEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSI 1028 (1226)
Q Consensus 952 ~~~~lTv~E~l~f~~~lr~~--~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~i 1028 (1226)
+++.+||+|++.++..-... ........++.++++++.+++.+ ..++.+ ..|||||||||+||++|+.+|++
T Consensus 350 l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~l 424 (500)
T TIGR02633 350 IVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRV 424 (500)
T ss_pred cCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCE
Confidence 78889999999875321110 11222334566889999999964 456653 56999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1029 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1029 l~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|||||||+|||+.++..+++.|++++++|.|||++|||++ ++.+.||++++|++ |+++..++.
T Consensus 425 llLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 425 LILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred EEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 9999999999999999999999999888999999999987 58889999999986 688877754
No 26
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-64 Score=614.14 Aligned_cols=451 Identities=21% Similarity=0.308 Sum_probs=342.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+
T Consensus 18 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK11288 18 KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPEM 94 (501)
T ss_pred EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCCC
Confidence 4999999999999999999999999999999999999998 9999999988753321 35799999998899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.++......+.. + ..+....++.+++.+||++..+..+
T Consensus 95 tv~~~l~~~~~~~~~~~~--------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~----- 138 (501)
T PRK11288 95 TVAENLYLGQLPHKGGIV--------------------N-----------RRLLNYEAREQLEHLGVDIDPDTPL----- 138 (501)
T ss_pred CHHHHHHhcccccccCCC--------------------C-----------HHHHHHHHHHHHHHcCCCCCcCCch-----
Confidence 999999986421000000 0 0011224567889999986666544
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|++++. . +++||.++|+..++..++|+|++|++|
T Consensus 139 ~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~G 216 (501)
T PRK11288 139 KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKDG 216 (501)
T ss_pred hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 445666788889999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhcCC
Q 000913 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1226)
Q Consensus 402 ~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~~~ 481 (1226)
+++..++..+. . +.++..+.
T Consensus 217 ~i~~~~~~~~~--------------------------------------~-----~~~~~~~~----------------- 236 (501)
T PRK11288 217 RYVATFDDMAQ--------------------------------------V-----DRDQLVQA----------------- 236 (501)
T ss_pred EEEeecCcccc--------------------------------------C-----CHHHHHHH-----------------
Confidence 99864421000 0 00000000
Q ss_pred ccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHH
Q 000913 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1226)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~l 561 (1226)
+. . ..
T Consensus 237 -----------------------------------------------------------~~--~--~~------------ 241 (501)
T PRK11288 237 -----------------------------------------------------------MV--G--RE------------ 241 (501)
T ss_pred -----------------------------------------------------------hc--C--CC------------
Confidence 00 0 00
Q ss_pred HHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHHHH
Q 000913 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1226)
Q Consensus 562 ff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l 641 (1226)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCCcc
Q 000913 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1226)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~ 721 (1226)
.
T Consensus 242 -------------------------------------------------------------------------------~ 242 (501)
T PRK11288 242 -------------------------------------------------------------------------------I 242 (501)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000913 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1226)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1226)
. .. ..
T Consensus 243 ~-----------------------~~---------------------------~~------------------------- 247 (501)
T PRK11288 243 G-----------------------DI---------------------------YG------------------------- 247 (501)
T ss_pred c-----------------------cc---------------------------cc-------------------------
Confidence 0 00 00
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccCce
Q 000913 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1226)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1226)
. .+ . +..+..++++|+++.
T Consensus 248 --------------~-~~-----------------------~------~~~~~~l~~~~~~~~----------------- 266 (501)
T PRK11288 248 --------------Y-RP-----------------------R------PLGEVRLRLDGLKGP----------------- 266 (501)
T ss_pred --------------c-cc-----------------------c------CCCCcEEEEeccccC-----------------
Confidence 0 00 0 000013555666421
Q ss_pred EEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhcceeeEeecCC---CCCC
Q 000913 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSP 954 (1226)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~ 954 (1226)
.+++|+|+++++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .+++
T Consensus 267 ~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 344 (501)
T PRK11288 267 GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIP 344 (501)
T ss_pred CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcC
Confidence 37999999999999999999999999999999999875 468999999976532 12345689999986 4788
Q ss_pred CCCHHHHHHHHHHhhcCC-C--CCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000913 955 FVTIYESLLFSAWLRLSP-E--VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1030 (1226)
Q Consensus 955 ~lTv~E~l~f~~~lr~~~-~--~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~ 1030 (1226)
.+|+.|++.+........ . ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+|||
T Consensus 345 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lll 419 (501)
T PRK11288 345 VHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVIL 419 (501)
T ss_pred CCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEE
Confidence 899999998753221100 0 11223345688999999994 5667664 4699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCcc
Q 000913 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRH 1096 (1226)
Q Consensus 1031 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~~~ 1096 (1226)
|||||+|||+.++..++++|++++++|.|||++|||+. ++.+.+|++++|++ |++++.|..++.
T Consensus 420 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~ 483 (501)
T PRK11288 420 LDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQA 483 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccC
Confidence 99999999999999999999999888999999999987 58889999999985 689999987543
No 27
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.4e-62 Score=660.57 Aligned_cols=210 Identities=19% Similarity=0.243 Sum_probs=178.1
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 47999999999863 12469999999999999999999999999999999999864 47999999998
Q ss_pred CCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
+.+ ..+++.++||||++.+++. |+||||.... .. .++.++++++.++|.+.. |+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 754 4577889999999999875 9999995321 11 234588999999986543 444554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
+..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999875 4799999999985 4567999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++.+|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 799999975
No 28
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=8.4e-62 Score=652.98 Aligned_cols=211 Identities=23% Similarity=0.259 Sum_probs=179.4
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..|+|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999999852 12359999999999999999999999999999999999876 568999999998
Q ss_pred CCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
+.. ..+++.+|||||++.++.. ||+|||... .+.+ ++.++++++.+++.+.. |+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 753 5678899999999998875 999999531 1222 34588999999987653 4555553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1004 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~-p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
..+||||||||++|||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 467999999999999999996 89999999999999999999999999875 4799999999985 567899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 6 799999985
No 29
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-62 Score=601.58 Aligned_cols=450 Identities=18% Similarity=0.277 Sum_probs=340.7
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 240 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1226)
+++|+|||+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35999999999999999999999999999999999999998 9999999998754322 3569999999888999
Q ss_pred CCHHHHHHHHhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
+||+||+.++.. ..+.... ..+....++.+++.+||++..+..+
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVD--------------------------------QDKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhcccccccccccC--------------------------------HHHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999987632 1110000 0001123567888999987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||++|+.+|++|||||||+|||+.+..++.+.|++++. .+ .+||.++|+..++.+++|+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RG-CGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999764 34 455567888899999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhc
Q 000913 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~ 479 (1226)
+|+++..|+.+++.. .+..+.
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHH---------------
Confidence 999998876542100 000000
Q ss_pred CCccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhh
Q 000913 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1226)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1226)
+. + ..
T Consensus 230 -------------------------------------------------------------~~--~--~~---------- 234 (491)
T PRK10982 230 -------------------------------------------------------------MV--G--RS---------- 234 (491)
T ss_pred -------------------------------------------------------------Hh--C--CC----------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHH
Q 000913 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1226)
Q Consensus 560 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~ 639 (1226)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCC
Q 000913 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1226)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 719 (1226)
..
T Consensus 235 ---------------------------------------------------~~--------------------------- 236 (491)
T PRK10982 235 ---------------------------------------------------LT--------------------------- 236 (491)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred ccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000913 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1226)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1226)
. .+ +
T Consensus 237 --~-------------------------------------------------~~--~----------------------- 240 (491)
T PRK10982 237 --Q-------------------------------------------------RF--P----------------------- 240 (491)
T ss_pred --c-------------------------------------------------cc--c-----------------------
Confidence 0 00 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccC
Q 000913 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1226)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~ 879 (1226)
. + . .. + .+..++++|+++..
T Consensus 241 ---------------~---~-------------------~--~~------~-~~~~i~~~~l~~~~-------------- 260 (491)
T PRK10982 241 ---------------D---K-------------------E--NK------P-GEVILEVRNLTSLR-------------- 260 (491)
T ss_pred ---------------c---c-------------------c--CC------C-CCcEEEEeCccccc--------------
Confidence 0 0 0 00 0 01136677776641
Q ss_pred ceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhcceeeEeecCCC---C
Q 000913 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQNDI---H 952 (1226)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~---~ 952 (1226)
+.+|+|||+.+++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|+.. +
T Consensus 261 -~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~ 337 (491)
T PRK10982 261 -QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGI 337 (491)
T ss_pred -CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCc
Confidence 138999999999999999999999999999999999876 468999999976542 123456899999853 5
Q ss_pred CCCCCHHHHHHHHHH---hhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000913 953 SPFVTIYESLLFSAW---LRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSI 1028 (1226)
Q Consensus 953 ~~~lTv~E~l~f~~~---lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~i 1028 (1226)
++.+|+.++..+... ............++.+.++++.+++. +..+.. +..|||||||||+||++|+.+|+|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~i 412 (491)
T PRK10982 338 YAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEI 412 (491)
T ss_pred ccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCE
Confidence 778888877433211 01000012233345678899999985 455555 357999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 000913 1029 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1226)
Q Consensus 1029 l~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~ 1094 (1226)
|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |+++..++..
T Consensus 413 llLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 413 LMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred EEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999999999999999888999999999987 57889999999986 6888777653
No 30
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1e-61 Score=593.29 Aligned_cols=214 Identities=19% Similarity=0.302 Sum_probs=166.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|.... ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 378889988763 24599999999999999999999999999999999996531 1479999999764
Q ss_pred Ch----hhhcceeeEeecCCCCCC--CCCHHHHHHHHHHh--hcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 000913 935 KQ----ETFARISGYCEQNDIHSP--FVTIYESLLFSAWL--RLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1226)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~~~~--~lTv~E~l~f~~~l--r~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 1005 (1226)
.. ...++.+||++|++.++. ..|+++++.+.... ....... ...++.++++++.++|.+ ..+..+
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~----- 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF----- 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----
Confidence 21 123467999999875543 35677766543211 1111112 223456889999999987 666653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCcHHHHH-hcCeEEEEec
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELFLMKR 1083 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~t~H~p~~~i~~-~~D~v~ll~~ 1083 (1226)
..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++| .|||+++|+++ ++.+ .+|++++|++
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~ 478 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD 478 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC
Confidence 5799999999999999999999999999999999999999999999998776 46999999986 4655 5899999987
Q ss_pred CcEEEEe
Q 000913 1084 GGQEIYV 1090 (1226)
Q Consensus 1084 Gg~~~y~ 1090 (1226)
|++++.
T Consensus 479 -G~i~~~ 484 (490)
T PRK10938 479 -GDIYRY 484 (490)
T ss_pred -CceEEe
Confidence 565544
No 31
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-62 Score=605.48 Aligned_cols=353 Identities=37% Similarity=0.643 Sum_probs=299.9
Q ss_pred CCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEc
Q 000913 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITIS 930 (1226)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~ 930 (1226)
.+..+.|+|+++..+.+.. ..+++|+||||.++|||++|||||||||||||||+|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567899999998875421 3478999999999999999999999999999999999998764 789999999
Q ss_pred CccCChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 931 GYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 931 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
|++.....+++.+|||+|+|.+++.+||+|+|.|+|.+|++...+.++++++|+++++.+||.+++|+++|.++.+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
||||||+||.+|++||+||||||||||||+.++..++++|+++|++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 599999
Q ss_pred CCCCcchhhHHHHHHhCCCccCCCCCCCccceeeeecchh--hhhh----hcCCHHHHhhccHHHHHHH-HHHhhhCCCC
Q 000913 1091 GPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAAS--QELA----LGIDFTEHYKRSDLYRRNK-ALIEDLSRPP 1163 (1226)
Q Consensus 1091 G~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~--~~~~----~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~ 1163 (1226)
|+. +++++||++. |. +||+++|||||++|+++.. .+.. ........++..+...+.. .....+....
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTSK 326 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhccccc
Confidence 996 5899999998 55 5999999999999988742 1100 0001111111011111110 0001111111
Q ss_pred CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000913 1164 PGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGR 1225 (1226)
Q Consensus 1164 ~~~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~~~~~g~~ 1225 (1226)
..+....++||.||+.|++|.+++.+|+|.+...|+++.+++|+++|++||+++++
T Consensus 327 ------~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~ 382 (613)
T KOG0061|consen 327 ------KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND 382 (613)
T ss_pred ------ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 11112278999999999999999999999999999999999999999999999864
No 32
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.4e-59 Score=576.45 Aligned_cols=201 Identities=21% Similarity=0.295 Sum_probs=164.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|||++|++|+++||+||||||||||+++|+|... +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 488899988763 2469999999999999999999999999999999999876 4689999854 2
Q ss_pred ChhhhcceeeEeecCC-CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHH
Q 000913 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1012 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~LSgGq 1012 (1226)
..+||++|+. .+++.+||+|++.+...... .... ...+.++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999996 67788999999988643221 1111 123457899999964 45555 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEE-EeC
Q 000913 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1091 (1226)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~-y~G 1091 (1226)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. | |||++||++. .+.+.||++++|++||++. |.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999987 4778899999998767766 455
Q ss_pred C
Q 000913 1092 P 1092 (1226)
Q Consensus 1092 ~ 1092 (1226)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 3
No 33
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-59 Score=516.09 Aligned_cols=470 Identities=24% Similarity=0.327 Sum_probs=366.2
Q ss_pred ccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCCCcc-------ceEEEecC
Q 000913 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFVPQ-------RTAAYISQ 233 (1226)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~~~~-------~~~~yv~Q 233 (1226)
....++++|||.+++||.+||+|.||||||-..+.+.|+++.. ...+|+|.|+|.++-....+ ..|+.|+|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 3456999999999999999999999999999999999999763 35589999999987554432 47999999
Q ss_pred CC--CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc
Q 000913 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1226)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1226)
++ .+-|-.|+..-|.-..+++... ....++.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg~---------------------------------~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRGL---------------------------------SRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhcc---------------------------------cHHHHHHHHHHHHHHcCCCch
Confidence 97 5677778877776655553211 112234456778899999875
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhh
Q 000913 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1226)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1226)
...+ +.++.+|||||||||.||.||+.+|++||.||||++||.....+|.+.|+++-.+ -+-.++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHh
Confidence 5433 4678899999999999999999999999999999999999999999999998764 455666799999999999
Q ss_pred cCcEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhh
Q 000913 392 FDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVG 471 (1226)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~ 471 (1226)
+|+|+||..|+||++|+.+++.. .|. .||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~Pq-------------------------HpYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQ-------------------------HPYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCC-------------------------ChHH-----------------
Confidence 99999999999999998776521 010 0000
Q ss_pred hhhHHhhcCCccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccc
Q 000913 472 QKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTV 551 (1226)
Q Consensus 472 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~ 551 (1226)
|.++ .
T Consensus 255 ---------------------------------------r~Ll------------------------------~------ 259 (534)
T COG4172 255 ---------------------------------------RKLL------------------------------A------ 259 (534)
T ss_pred ---------------------------------------HHHH------------------------------h------
Confidence 0000 0
Q ss_pred ccccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcC
Q 000913 552 TDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDS 631 (1226)
Q Consensus 552 ~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~ 631 (1226)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHH
Q 000913 632 NAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAI 711 (1226)
Q Consensus 632 ~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al 711 (1226)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeecccccc
Q 000913 712 VANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESN 791 (1226)
Q Consensus 712 ~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 791 (1226)
.| |
T Consensus 260 --ae------------------------------------------------------------P--------------- 262 (534)
T COG4172 260 --AE------------------------------------------------------------P--------------- 262 (534)
T ss_pred --cC------------------------------------------------------------C---------------
Confidence 00 0
Q ss_pred ccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchh
Q 000913 792 EQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEM 871 (1226)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~ 871 (1226)
.+ .+ ....+..|..++.+|+...++.++.+
T Consensus 263 -----~g-------------------~~--------------------------~p~~~~~~~ll~~~~v~v~f~i~~g~ 292 (534)
T COG4172 263 -----SG-------------------DP--------------------------PPLPEDAPVLLEVEDLRVWFPIKGGF 292 (534)
T ss_pred -----CC-------------------CC--------------------------CCCCCCCCceEEecceEEEEecCCcc
Confidence 00 00 00000112345566665555544322
Q ss_pred hhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhcceeeE
Q 000913 872 KVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ETFARISGY 945 (1226)
Q Consensus 872 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy 945 (1226)
-.. ..+...++++||++.++||.+||+|.||||||||=.+|.+... .+|.|.++|.++.. ...++.+-.
T Consensus 293 ~~r--~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQv 367 (534)
T COG4172 293 LRR--TVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQV 367 (534)
T ss_pred ccc--cchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceE
Confidence 110 1133579999999999999999999999999999999999875 35999999988753 235677899
Q ss_pred eecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHH
Q 000913 946 CEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVEL 1022 (1226)
Q Consensus 946 v~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~LSgGqrqrl~ia~~L 1022 (1226)
|+|||. +.|.+||.+-+.=+.....+ ..+..+++++|.++|+.+||++- ++++ +.++|||||||++|||||
T Consensus 368 VFQDPygSLsPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAl 441 (534)
T COG4172 368 VFQDPYGSLSPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARAL 441 (534)
T ss_pred EEeCCCCCCCcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHH
Confidence 999985 77999999988876555443 56788999999999999999863 4444 467999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1023 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1023 ~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
+.+|++++||||||.||-.-+..|+++|+++. +.|.+-++++||... +-.+||++++|++ |++|..||.
T Consensus 442 iLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~V-vrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 442 ILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAV-VRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred hcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHHhhceEEEEeC-CEEeeeCCH
Confidence 99999999999999999999999999999996 459999999999873 7779999999986 799999985
No 34
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-59 Score=576.58 Aligned_cols=198 Identities=17% Similarity=0.254 Sum_probs=164.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+||+|++|++++|+|||||||||||++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488999988874 2358999999999999999999999999999999999876 45899999873
Q ss_pred ChhhhcceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHH
Q 000913 935 KQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSgG 1011 (1226)
+.+||++|++. +.+.+||+|++.+.. .. . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE---G--DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC---C--ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 35899999864 456799999986421 11 1 1134578899999994 566665 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEE-Ee
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1090 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~-y~ 1090 (1226)
|||||+||++|+.+|+||+|||||+|||+.+...+++.|+++ +.|||++||++. .+.+.||++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999986 459999999987 47788999999997 5665 77
Q ss_pred CCC
Q 000913 1091 GPL 1093 (1226)
Q Consensus 1091 G~~ 1093 (1226)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 35
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.1e-58 Score=570.49 Aligned_cols=201 Identities=18% Similarity=0.273 Sum_probs=164.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|||++|++|+++||+|||||||||||++|+|... +.+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECC-c-
Confidence 488899988763 2469999999999999999999999999999999999876 4689999854 2
Q ss_pred ChhhhcceeeEeecCC-CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHH
Q 000913 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1012 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~LSgGq 1012 (1226)
..+||++|+. .+++.+||.|++.+...... .... +..+.++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 47788999999988642211 1111 123557899999964 45555 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEE-EeC
Q 000913 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1091 (1226)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~-y~G 1091 (1226)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. .|||++||++. .+.+.||++++|++||++. +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999987 4778899999998766766 444
Q ss_pred C
Q 000913 1092 P 1092 (1226)
Q Consensus 1092 ~ 1092 (1226)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 36
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-56 Score=556.67 Aligned_cols=197 Identities=22% Similarity=0.347 Sum_probs=161.3
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.+.++|+++.++ ++.+|+|+||.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 478899988773 2469999999999999999999999999999999999876 46899998641
Q ss_pred ChhhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHH
Q 000913 935 KQETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~LSgG 1011 (1226)
..+||++|+. .+.+..|+.+++.- . .. ......+.++++.+++.+ ..+..+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 11 122345788999999963 556553 569999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEE-Ee
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1090 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~-y~ 1090 (1226)
|||||+||++|+.+|+||||||||+|||+.+...+.+.|+++ . .|||++|||+. .+...||++++|.+ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999987 47789999999986 5665 88
Q ss_pred CCC
Q 000913 1091 GPL 1093 (1226)
Q Consensus 1091 G~~ 1093 (1226)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 874
No 37
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4.5e-56 Score=556.83 Aligned_cols=202 Identities=23% Similarity=0.323 Sum_probs=164.5
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+||.|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 478899988763 2469999999999999999999999999999999999865 46899998 4322
Q ss_pred ChhhhcceeeEeecCC-CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHH
Q 000913 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQ 1012 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSgGq 1012 (1226)
.+||++|+. .+++.+||.|++.+..... ... .....+.++++.+++. +..++.+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999985 5788899999998753211 011 1123577889988885 3455553 5699999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe-cCcEEEEeC
Q 000913 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-RGGQEIYVG 1091 (1226)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~-~Gg~~~y~G 1091 (1226)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||+. .+...||++++|. +|.-..|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999986 4778999999997 565556666
Q ss_pred CC
Q 000913 1092 PL 1093 (1226)
Q Consensus 1092 ~~ 1093 (1226)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 53
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.9e-56 Score=550.48 Aligned_cols=211 Identities=20% Similarity=0.235 Sum_probs=172.4
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ + ..|+++|+++++||++||+||||||||||+++|+|... +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 477888887653 1 24899999999999999999999999999999999876 468999885
Q ss_pred ChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1489999998888889999999875211 111 124678999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++||+. .+...+|++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 4778899999996 3 77777764
Q ss_pred Ccc---hhhHHHHHHhC
Q 000913 1094 GRH---SCHLISYFEAI 1107 (1226)
Q Consensus 1094 ~~~---~~~~~~~f~~~ 1107 (1226)
... ...+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 322 12344555555
No 39
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-55 Score=509.65 Aligned_cols=446 Identities=23% Similarity=0.377 Sum_probs=348.2
Q ss_pred cceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCCCCCC
Q 000913 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIG 239 (1226)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1226)
..++|+||||.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.+||.+..-..++ .-|+.|.|+..++|
T Consensus 20 gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p 96 (500)
T COG1129 20 GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLVP 96 (500)
T ss_pred CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhccC
Confidence 356999999999999999999999999999999999999999 99999999988655553 46899999999999
Q ss_pred CCCHHHHHHHHhHhcCC-CchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 240 EMTVRETLAFSARCQGV-GTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+|||.|||.++...... +. .+....+..+..+|+.+|++...++.|++
T Consensus 97 ~LsVaeNifLgre~~~~~g~-------------------------------id~~~m~~~A~~~l~~lg~~~~~~~~v~~ 145 (500)
T COG1129 97 NLSVAENIFLGREPTRRFGL-------------------------------IDRKAMRRRARELLARLGLDIDPDTLVGD 145 (500)
T ss_pred CccHHHHhhcccccccCCCc-------------------------------cCHHHHHHHHHHHHHHcCCCCChhhhhhh
Confidence 99999999887643321 00 01122334567789999997557888875
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
||+||||-|.||+|+..+++|++|||||+.|+...+..+++.++++. ..+..||.|+|...|++++||+|.||
T Consensus 146 -----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk--~~Gv~ii~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 146 -----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK--AQGVAIIYISHRLDEVFEIADRITVL 218 (500)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEcCcHHHHHHhcCEEEEE
Confidence 99999999999999999999999999999999999999999999975 45677788999999999999999999
Q ss_pred cCCeEEEecCh-hHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHh
Q 000913 399 SDGQIVYQGPR-ELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDE 477 (1226)
Q Consensus 399 ~~G~iv~~G~~-~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~ 477 (1226)
.||+++..++. .+. +.+++.
T Consensus 219 RDG~~v~~~~~~~~~--------------------------------------------~~~~lv--------------- 239 (500)
T COG1129 219 RDGRVVGTRPTAAET--------------------------------------------SEDELV--------------- 239 (500)
T ss_pred eCCEEeeecccccCC--------------------------------------------CHHHHH---------------
Confidence 99999876542 211 000000
Q ss_pred hcCCccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccch
Q 000913 478 LRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIF 557 (1226)
Q Consensus 478 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~ 557 (1226)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHH
Q 000913 558 AGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFF 637 (1226)
Q Consensus 558 ~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~ 637 (1226)
-.|+|=
T Consensus 240 ------------------------------------------------------------------~~MvGr-------- 245 (500)
T COG1129 240 ------------------------------------------------------------------RLMVGR-------- 245 (500)
T ss_pred ------------------------------------------------------------------HHhhCc--------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhc
Q 000913 638 KQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFL 717 (1226)
Q Consensus 638 ~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 717 (1226)
++
T Consensus 246 -----------------------------------------------------------------------------~~- 247 (500)
T COG1129 246 -----------------------------------------------------------------------------EL- 247 (500)
T ss_pred -----------------------------------------------------------------------------ch-
Confidence 00
Q ss_pred CCccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeecccccccccccc
Q 000913 718 GHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRI 797 (1226)
Q Consensus 718 ~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1226)
.. .| + .
T Consensus 248 ----~~------------------------------------------------~~--~--~------------------ 253 (500)
T COG1129 248 ----ED------------------------------------------------LF--P--E------------------ 253 (500)
T ss_pred ----hh------------------------------------------------hc--c--c------------------
Confidence 00 00 0 0
Q ss_pred CCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccc
Q 000913 798 GGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVL 877 (1226)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~ 877 (1226)
. ... ...+..+++++++..
T Consensus 254 -----------------------------------------~-~~~------~~~~~~l~v~~l~~~------------- 272 (500)
T COG1129 254 -----------------------------------------P-PEE------GIGEPVLEVRNLSGG------------- 272 (500)
T ss_pred -----------------------------------------c-ccc------CCCCcEEEEecCCCC-------------
Confidence 0 000 000112344443211
Q ss_pred cCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhcceeeEeecCC---
Q 000913 878 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND--- 950 (1226)
Q Consensus 878 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~--- 950 (1226)
..++||||++++||++||.|-=|||+|-|+++|.|... ...|+|.++|.+... ...+..++|||.|.
T Consensus 273 ----~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~ 346 (500)
T COG1129 273 ----GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSE 346 (500)
T ss_pred ----CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccC
Confidence 14889999999999999999999999999999999654 458999999987643 34556799999984
Q ss_pred CCCCCCCHHHHHHHHHHhhcCC--CCCHHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000913 951 IHSPFVTIYESLLFSAWLRLSP--EVDSETRKMFIDEVMELVELNPLR-QSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1226)
Q Consensus 951 ~~~~~lTv~E~l~f~~~lr~~~--~~~~~~~~~~v~~~l~~l~l~~~~-~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~ 1027 (1226)
-++..++|.+|+.++...+... -++....++.+++..+.+++.... +.. +..||||++|||.|||.|..+|+
T Consensus 347 Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~ 421 (500)
T COG1129 347 GLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPK 421 (500)
T ss_pred cCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCC
Confidence 4678899999999873323221 245556667788999999886432 122 46799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1028 il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
||||||||.|+|..+...|.+++++++++|++||++|-+.. |+..+||||++|++ |+++-
T Consensus 422 vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~ 481 (500)
T COG1129 422 VLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVG 481 (500)
T ss_pred EEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999875 79999999999996 67765
No 40
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.3e-55 Score=549.60 Aligned_cols=362 Identities=28% Similarity=0.478 Sum_probs=287.9
Q ss_pred CCceeEEeceeeEEeccchhh--------------hcc--cccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhc
Q 000913 852 EPHSLTFDEVVYSVDMPEEMK--------------VQG--VLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 915 (1226)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~--------------~~~--~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~ 915 (1226)
.+..+.|.++.|.++...... ..+ ...+++.+|+|||+++++||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999987543100 001 1234578999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEEcCccCChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc
Q 000913 916 GRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL 995 (1226)
Q Consensus 916 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~ 995 (1226)
|+..++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876444689999999886543 345689999999999999999999999877765555666677889999999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhc
Q 000913 996 RQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1075 (1226)
Q Consensus 996 ~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~ 1075 (1226)
+|+.+|....++|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999877778999999999999999999999999999999999999999999999998889999999999997799999
Q ss_pred CeEEEEecCcEEEEeCCCCcchhhHHHHHHhCCCccCCCCCCCccceeeeecchhhhhh-----h----cCCHHHHhhcc
Q 000913 1076 DELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQELA-----L----GIDFTEHYKRS 1146 (1226)
Q Consensus 1076 D~v~ll~~Gg~~~y~G~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~-----~----~~~~~~~~~~s 1146 (1226)
|++++|++ |+++|.|+. +++++||++++ . +||+++|||||++|+++...... . .....+.|+..
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999986 58999999984 4 69999999999999987532100 0 01123344321
Q ss_pred HHHHHHHHHHhhh--CC-CCC-----CCCCCC-CCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 000913 1147 DLYRRNKALIEDL--SR-PPP-----GSKDLY-FPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGS 1217 (1226)
Q Consensus 1147 ~~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~ 1217 (1226)
. .+.....++.. .. +.+ ..+... ....+.++||+|+.+|++|++++ ||++.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 000000 11235678999999999999998 99999999999999999999999
Q ss_pred HhcCCC
Q 000913 1218 LFWDLG 1223 (1226)
Q Consensus 1218 ~~~~~g 1223 (1226)
+||+++
T Consensus 426 lf~~~~ 431 (659)
T PLN03211 426 MWWHSD 431 (659)
T ss_pred HHhcCC
Confidence 999985
No 41
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7.9e-56 Score=552.31 Aligned_cols=340 Identities=34% Similarity=0.558 Sum_probs=290.3
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCccCChhhhcceeeEeecCCCCCCCCC
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVT 957 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 957 (1226)
+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987643 357999999998876667888999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC-CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000913 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1226)
Q Consensus 958 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~-~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTs 1036 (1226)
|+|||.|++.++.+...+.++++++++++++.++|.+++|+.+|.++ .++|||||||||+||+||+++|++|||||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999998887767777888899999999999999999999754 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCcchhhHHHHHHhCCCccCCCCC
Q 000913 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDG 1116 (1226)
Q Consensus 1037 gLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~~~~~~~~~~f~~~~~~~~~~~~ 1116 (1226)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|+|+. +++.+||++++ . +||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g-~-~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLG-H-PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcC-C-CCCCC
Confidence 99999999999999999988999999999999889999999999985 799999996 57899999984 4 69999
Q ss_pred CCccceeeeecchhhhhh-----hcCCHHHHhhccHHHHHHHHHHhhhCCCCCC---CCCCCCCCccCCCHHHHHHHHHH
Q 000913 1117 YNPATWMLEVSAASQELA-----LGIDFTEHYKRSDLYRRNKALIEDLSRPPPG---SKDLYFPTQFSQSSWIQFVACLW 1188 (1226)
Q Consensus 1117 ~npa~~~l~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~q~~~l~~ 1188 (1226)
+|||||++|+++...+.. ...++.+.|+.|+.+++..+.+.....+.+. ........+|..+|+.|+..|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 999999999987543211 1124566777777665544333221111111 11111234678999999999999
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000913 1189 KQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGR 1225 (1226)
Q Consensus 1189 r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~~~~~g~~ 1225 (1226)
|+++.+||||.+..+|+++++++|+++|++||+++++
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~ 385 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLT 385 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 9999999999999999999999999999999999865
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=7.1e-54 Score=536.19 Aligned_cols=200 Identities=18% Similarity=0.268 Sum_probs=158.4
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|... +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 488999998873 12358999999999999999999999999999999999876 46799988652
Q ss_pred ChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHH
Q 000913 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~LSgGqr 1013 (1226)
..+||++|+.. ..+++.++..+......+ ... ++.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999752 345666654332111111 111 245788999999974 44554 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEE-EeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~-y~G~ 1092 (1226)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. . .|||++||++. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888765 3 49999999987 47788999999986 6776 7775
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=6.5e-53 Score=505.21 Aligned_cols=217 Identities=27% Similarity=0.324 Sum_probs=170.2
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
+++|+|+|+.+.+|+.++|+|+|||||||||++|+|.+.|+ +|+|...+. -.++|++|+....+..||.
T Consensus 16 ~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~tv~ 84 (530)
T COG0488 16 RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEKTVL 84 (530)
T ss_pred ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCccHH
Confidence 45999999999999999999999999999999999999998 999987642 3699999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCCh---HHHHH-HHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDI---DVYMK-AIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~-~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1226)
+.+.-+.. ...+...+...... ..++++. +.+.. ....++.+.+..++.+|.-||++.. ++.++
T Consensus 85 ~~v~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~--- 152 (530)
T COG0488 85 DYVIEGFG-----ELRELLAELEEAYA---LLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS--- 152 (530)
T ss_pred HHHHhhhH-----HHHHHHHHHHHHHH---hcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh---
Confidence 99976542 12222222222111 1112111 11111 1223446667788999999999876 66655
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
.||||||.||+||++|+.+|++|+||||||+||..+..++.+.|++ ..+ ++|.++|++..+-+.|++|+-++.
T Consensus 153 --~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~----~~g-tviiVSHDR~FLd~V~t~I~~ld~ 225 (530)
T COG0488 153 --SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR----YPG-TVIVVSHDRYFLDNVATHILELDR 225 (530)
T ss_pred --hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh----CCC-cEEEEeCCHHHHHHHhhheEEecC
Confidence 5999999999999999999999999999999999999999999985 234 566689999999999999999999
Q ss_pred CeE-EEecChhH
Q 000913 401 GQI-VYQGPREL 411 (1226)
Q Consensus 401 G~i-v~~G~~~~ 411 (1226)
|++ .|.|..+.
T Consensus 226 g~l~~y~Gny~~ 237 (530)
T COG0488 226 GKLTPYKGNYSS 237 (530)
T ss_pred CceeEecCCHHH
Confidence 987 46666553
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=9e-51 Score=462.00 Aligned_cols=457 Identities=22% Similarity=0.312 Sum_probs=355.7
Q ss_pred cceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCCCCCC
Q 000913 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIG 239 (1226)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1226)
...+++|||+.+++||+.||+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ .-||.|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 456999999999999999999999999999999999999999 99999999998655553 46899999999999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
++||.|||..+..-... .+. ...+...+++.+.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~~------------------------------~~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GLI------------------------------DRRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-ccc------------------------------CHHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999987642100 000 0112234567888999999988988876
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
||=||||||.|-++|+.+|++|||||||+-|-|....++++.|++++. . +.+||.|+|-..|+.+.+|++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~-G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-E-GKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999875 4 4555668999999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhHHhhc
Q 000913 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~~~~~~~l~ 479 (1226)
.|+++-.-++ . . + .+.+++++.
T Consensus 215 ~Gkvvgt~~~--~--------------~------------------------~---~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP--V--------------A------------------------E---TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC--C--------------C------------------------C---CCHHHHHHH---------------
Confidence 9998643210 0 0 0 000000000
Q ss_pred CCccccchhhccccccccCCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhh
Q 000913 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1226)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~r~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1226)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhchhhHHhhcccccChhhHHHHHHHHHhcHHHHHHHHHHHHhhhcccCcCchhHHHHH
Q 000913 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1226)
Q Consensus 560 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~ 639 (1226)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHhHcHHHHHHHHHHHHhhcCC
Q 000913 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1226)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 719 (1226)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000913 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1226)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1226)
.++.. +
T Consensus 240 --------------~~v~~-------------------------------------~----------------------- 245 (501)
T COG3845 240 --------------REVVL-------------------------------------R----------------------- 245 (501)
T ss_pred --------------Ccccc-------------------------------------c-----------------------
Confidence 00000 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCCccCCCCceeEEeceeeEEeccchhhhcccccC
Q 000913 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1226)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~ 879 (1226)
. + ..... |- +..++++|++..-+.
T Consensus 246 ----------------~--~--------------------~~~~~-----pg-~~vL~V~~L~v~~~~------------ 269 (501)
T COG3845 246 ----------------V--V--------------------KPPST-----PG-EVVLEVEDLSVKDRR------------ 269 (501)
T ss_pred ----------------c--c--------------------cCCCC-----CC-CeEEEEeeeEeecCC------------
Confidence 0 0 00000 00 124667777654321
Q ss_pred ceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC----Chh-hhcceeeEeecCCC---
Q 000913 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK----KQE-TFARISGYCEQNDI--- 951 (1226)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~----~~~-~~~~~~gyv~Q~~~--- 951 (1226)
....+++|||++++||++||.|..|-|-+.|+.+|+|..+ +..|+|.++|.+. +.. ..+..++|||.|..
T Consensus 270 ~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~G 347 (501)
T COG3845 270 GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHG 347 (501)
T ss_pred CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCc
Confidence 1357999999999999999999999999999999999865 3459999999986 222 23456899999864
Q ss_pred CCCCCCHHHHHHHHHHhhc----CCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000913 952 HSPFVTIYESLLFSAWLRL----SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1226)
Q Consensus 952 ~~~~lTv~E~l~f~~~lr~----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~ 1027 (1226)
+.+.+|+.||+.+...-+. ..-.+..+.+++..++++.++.....-.. ..+.||||++||+-+||||..+|+
T Consensus 348 lv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~ 423 (501)
T COG3845 348 LVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPD 423 (501)
T ss_pred cccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCC
Confidence 4678999999988654221 11355677788899999999886322111 146899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 000913 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1226)
Q Consensus 1028 il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~ 1094 (1226)
+|++.+||-|||..+.+.|.+.|.+.++.|+.|++++-+.+ ++++++||+.+|.+ |+++...+..
T Consensus 424 lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 424 LLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred EEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 99999999999999999999999999999999999999998 79999999999996 7888777654
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.8e-45 Score=372.81 Aligned_cols=214 Identities=25% Similarity=0.368 Sum_probs=191.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|++.++ ++..+|+|||++|++||+++|+|||||||||||+||.++.. +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 6678887776 45689999999999999999999999999999999999877 56899999996542
Q ss_pred ----hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 936 ----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 936 ----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
-...|+.+|+|+|+..+||.+||.||+.++...- ...++++.++...+.|+.+||.+.+|.+ +..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2357788999999999999999999999875332 2356778888899999999999999988 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|||||+|||||+.+|+++++|||||.|||+....|.+.+++++++|.|.||+||+..+ .-+.+||+++|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999875 7788999999985 7999998
Q ss_pred CC
Q 000913 1092 PL 1093 (1226)
Q Consensus 1092 ~~ 1093 (1226)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 65
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-44 Score=368.32 Aligned_cols=220 Identities=25% Similarity=0.409 Sum_probs=187.2
Q ss_pred cceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC----CccceEEEecCCCCCCC
Q 000913 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF----VPQRTAAYISQHDNHIG 239 (1226)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~----~~~~~~~yv~Q~d~~~~ 239 (1226)
..++|+|||+.|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..|+.+|+|+|+.++||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 456999999999999999999999999999999999999998 99999999765321 23578999999999999
Q ss_pred CCCHHHHHHHHhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 240 EMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
++||.||+..+... ++ ....+++..+..+|+.+||.+.+|.+
T Consensus 91 HlTvleNv~lap~~v~~----------------------------------~~k~eA~~~A~~lL~~VGL~~ka~~y--- 133 (240)
T COG1126 91 HLTVLENVTLAPVKVKK----------------------------------LSKAEAREKALELLEKVGLADKADAY--- 133 (240)
T ss_pred cchHHHHHHhhhHHHcC----------------------------------CCHHHHHHHHHHHHHHcCchhhhhhC---
Confidence 99999999987421 11 11223445667889999999988854
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
+.+|||||||||+|||||+-+|+++++|||||+|||....++.+.+++++. .+ .+.+.++|....+-+.+|||+.|
T Consensus 134 --P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-eG-mTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 134 --PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred --ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-cC-CeEEEEechhHHHHHhhheEEEe
Confidence 567999999999999999999999999999999999999999999999986 44 44555789999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHH
Q 000913 399 SDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~ 435 (1226)
++|+++..|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999876 455666666677654
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=5.5e-43 Score=398.68 Aligned_cols=202 Identities=19% Similarity=0.231 Sum_probs=156.8
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..+.++|+++.++.. ..++++++|-+.+++.+|+|||||+||||||+++.|... +..|.|.-.-+.
T Consensus 388 pvi~~~nv~F~y~~~------------~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSDN------------PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCCCc------------chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--cccccccccccc
Confidence 358899999887632 258999999999999999999999999999999999876 456777543222
Q ss_pred CChhhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 934 KKQETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 934 ~~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
.+++..|+- .+.-..++.|+++=. . ..+.+.+.+..++..+||+.-.+.. ..+.||+|
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~~-----~---~~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~G 513 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMPK-----F---PDEKELEEMRSILGRFGLTGDAQVV----PMSQLSDG 513 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHHh-----c---cccchHHHHHHHHHHhCCCcccccc----chhhcccc
Confidence 223344432 233345666665421 1 1123455678899999998544332 14689999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
||+||..|+.++..|.||+|||||+|||..+...+-++|.+. ..+||+++||... |-..++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999998765 4689999999875 788999999999999999998
Q ss_pred CC
Q 000913 1092 PL 1093 (1226)
Q Consensus 1092 ~~ 1093 (1226)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 73
No 48
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-42 Score=393.30 Aligned_cols=214 Identities=30% Similarity=0.442 Sum_probs=190.1
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|++..+. .++.+|+||||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 5 i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~ 70 (293)
T COG1131 5 IEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVV 70 (293)
T ss_pred eeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCc
Confidence 56677776653 13689999999999999999999999999999999999887 46899999998765
Q ss_pred h--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
. ...++.+||++|++.+++.+||+|+|.|.+.++.... +..+++++++++.++|.+..++. +++||+|||
T Consensus 71 ~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~k 142 (293)
T COG1131 71 KEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMK 142 (293)
T ss_pred cCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHH
Confidence 4 4567889999999999999999999999999987542 44567899999999999855554 467999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+||+||+++|+||||||||+||||.++..+++.|++++++| +||++|||+++ ++...||++++|++ |++++.|+
T Consensus 143 qrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~ 220 (293)
T COG1131 143 QRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGT 220 (293)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 99999999999999999999999999999999999999999887 89999999997 68888999999986 79999997
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 221 ~ 221 (293)
T COG1131 221 P 221 (293)
T ss_pred H
Confidence 5
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-42 Score=372.64 Aligned_cols=224 Identities=29% Similarity=0.381 Sum_probs=194.0
Q ss_pred ccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCC
Q 000913 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDN 236 (1226)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~ 236 (1226)
...++|+|||+.|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|.++..+.. |+.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999999 9999999988876543 478999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccc
Q 000913 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1226)
++...||.||++|+.+..+.. ..+.+.++.++|+.+||++.+|.+
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccC-
Confidence 999999999999998876532 112345788899999999888754
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
+.+|||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++-++. +.+|+.++|-+.-+-+.||+|.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 56799999999999999999999999999999999999999999999987755 4555558888999999999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 000913 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVT 437 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~ 437 (1226)
+|++|+++++|+..++ |.-|.+.-.-.|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999887 44566655566665544
No 50
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-42 Score=359.93 Aligned_cols=230 Identities=27% Similarity=0.385 Sum_probs=199.5
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.+++++|+.++ +.+.+++|||++|++||+++||||||+||||||++|.|... +.+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 57888888765 46789999999999999999999999999999999999887 5689999999886
Q ss_pred Ch------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCC
Q 000913 935 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSG 1007 (1226)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~ 1007 (1226)
.+ ...++.+|+++|+-.+|..+||+||+.|. +|.....+++..++.+..-|+.+||.+. .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafp--lre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFP--LREHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhhee--hHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 23567899999999999999999999995 4444567778888889999999999987 6655 568
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1008 LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
||||++||++|||||+.+|+|||+||||+||||.++..+-++|+++.+. |.|+|++|||.. +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999866 999999999997 59999999999996 79
Q ss_pred EEEeCCCCc----chhhHHHHHHhCC
Q 000913 1087 EIYVGPLGR----HSCHLISYFEAIP 1108 (1226)
Q Consensus 1087 ~~y~G~~~~----~~~~~~~~f~~~~ 1108 (1226)
+++.|+..+ ...-+.+||....
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~ 249 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIR 249 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCC
Confidence 999999632 1123456776553
No 51
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=374.19 Aligned_cols=218 Identities=23% Similarity=0.332 Sum_probs=192.5
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
+++++|+..+... ..+...+|+|||++|++||++||+|.||||||||++++.++.. +.+|.|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5678887665421 1124579999999999999999999999999999999999877 57899999997653
Q ss_pred h------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
. ..+++.+|+++|+..++...||+||+.|...+.. .++++++++|.++++.+||.+.++.+ +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 2 2467889999999999999999999999877664 56889999999999999999999888 46799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~ 1088 (1226)
|||||||+|||||+.+|+||++|||||.|||++...|+++|+++.++ |.||+++||+++. +-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999754 9999999999874 7789999999986 7999
Q ss_pred EeCCC
Q 000913 1089 YVGPL 1093 (1226)
Q Consensus 1089 y~G~~ 1093 (1226)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99985
No 52
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-42 Score=361.74 Aligned_cols=210 Identities=27% Similarity=0.403 Sum_probs=185.6
Q ss_pred cceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCC
Q 000913 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGE 240 (1226)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1226)
.+.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||.++.+... |+.+|||-|.-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 355999999999999999999999999999999999999999 9999999999877654 6899999999999999
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000913 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1226)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1226)
+||.||+.+-..+++... ++.+.+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 999999999877765421 1234568899999999752 123577
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
+.+|||||+|||.+||||+.+|+|++||||+++|||-++.++.+.++++-+..+ ++||.++|+..|++.++|+|++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~-kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELG-KTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhC-CEEEEEecCHHHHHhhhceEEEecC
Confidence 889999999999999999999999999999999999999999999988766544 5556689999999999999999999
Q ss_pred CeEEEecChhHHHH
Q 000913 401 GQIVYQGPRELVLE 414 (1226)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1226)
|+++.++++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999874
No 53
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-42 Score=370.75 Aligned_cols=217 Identities=26% Similarity=0.416 Sum_probs=186.4
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.|+. + .+|+|||+++++|++++|+||||||||||+++|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 4789999998852 2 59999999999999999999999999999999999776 5689999999886
Q ss_pred ChhhhcceeeEeecCCCC--CCCCCHHHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQETFARISGYCEQNDIH--SPFVTIYESLLFSAWLRL--SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~--~~~lTv~E~l~f~~~lr~--~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.+..-+..+|||||...+ ..-+||+|-+..+...+. -...+.+ .++.|+++|+.+|+.+++++.+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~-d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKK-DKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHH-HHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 654435679999996533 223799999988743332 1222333 36789999999999999999876 5999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
||+|||.|||||+++|++|+|||||+|+|+.++..++++|+++.++|+||++++||++ .+.++||++++|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999998 4899999999997 489999
Q ss_pred CCCCc
Q 000913 1091 GPLGR 1095 (1226)
Q Consensus 1091 G~~~~ 1095 (1226)
|++..
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99753
No 54
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.7e-42 Score=374.32 Aligned_cols=218 Identities=27% Similarity=0.407 Sum_probs=190.3
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++.+|+++.|+ ++.+|+|+||++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 367889998884 4679999999999999999999999999999999999876 5689999999886
Q ss_pred Ch---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. +.+++.++||||.......+||+|.+.++..-+... ....++.++.|+++|+.+++.+++++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 43 567889999999998888999999999875432221 1123344457999999999999999885 56999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||+.|||||+++|+||+||||||+||...+..|+++++++. ++|+|||++.||++. ...+||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 99999999999999999999999999999999999999999998 459999999999985 8899999999986 79999
Q ss_pred eCCCC
Q 000913 1090 VGPLG 1094 (1226)
Q Consensus 1090 ~G~~~ 1094 (1226)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99864
No 55
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-42 Score=412.25 Aligned_cols=255 Identities=22% Similarity=0.381 Sum_probs=211.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCC---CcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhH
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL---PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1226)
+.++.-..+|+++.+|..|. +. .-|... .+..|+|+||+|.|+.
T Consensus 431 lmkgvGAs~rvFel~dr~P~-----i~----~~G~~~p~~~~G~IeF~~VsFaYP~------------------------ 477 (716)
T KOG0058|consen 431 LMKGVGASERVFELMDRKPR-----IP----LTGTLAPDHLQGVIEFEDVSFAYPT------------------------ 477 (716)
T ss_pred HHHhcchHHHHHHHhccCCC-----CC----CCCccccccccceEEEEEeeeecCC------------------------
Confidence 45666677899998888775 22 124433 4678999999999843
Q ss_pred hhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEe
Q 000913 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1226)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv 231 (1226)
+ +..+||+|+||+|+|||.|||+|||||||||+.++|..+++|+ +|+|++||+|+.++++ ++.||+|
T Consensus 478 ------R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V 547 (716)
T KOG0058|consen 478 ------R-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLV 547 (716)
T ss_pred ------C-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeee
Confidence 2 3466999999999999999999999999999999999999999 9999999999998876 4889999
Q ss_pred cCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc
Q 000913 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1226)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1226)
.|+|.+|. .||+|||.|+.. ....|.+.++++....+++ +.++++.
T Consensus 548 ~QEPvLFs-~sI~eNI~YG~~----~~t~e~i~~AAk~ANah~F-----------------------------I~~~p~g 593 (716)
T KOG0058|consen 548 GQEPVLFS-GSIRENIAYGLD----NATDEEIEAAAKMANAHEF-----------------------------ITNFPDG 593 (716)
T ss_pred eccceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhChHHH-----------------------------HHhCccc
Confidence 99998775 699999999874 2333444444444332211 5679999
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhh
Q 000913 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1226)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1226)
+||.||+++. .||||||||++|||||+++|+||||||.||+||+.+...+.+.|.+..+ ++|+++ |. |+.++.+.
T Consensus 594 Y~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IA-HRLSTV~~ 668 (716)
T KOG0058|consen 594 YNTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IA-HRLSTVRH 668 (716)
T ss_pred cccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Ee-hhhhHhhh
Confidence 9999999887 5999999999999999999999999999999999999999999988654 355554 43 46789999
Q ss_pred cCcEEEEcCCeEEEecChhHHHH
Q 000913 392 FDDIILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1226)
+|+|+++++|++++.|+++|+++
T Consensus 669 Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 669 ADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred ccEEEEEcCCeEEecccHHHHhh
Confidence 99999999999999999999875
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-42 Score=363.21 Aligned_cols=204 Identities=25% Similarity=0.371 Sum_probs=181.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.+.++++++.+. ...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 367788887764 3579999999999999999999999999999999999987 5689999999887
Q ss_pred ChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
.. ....+|||+|++.++|.+||+||+.|+...+. .+.++++++++++++.+||.++.+++ +..|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 32 34568999999999999999999999876654 35566777899999999999999998 4679999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
||+|||||+.+|+||+||||++.||+.++..+++.|.++. ++++|||++|||.. |...++|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 9999999999999999999999999999999999999986 45899999999987 678889999999874
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.9e-42 Score=383.91 Aligned_cols=216 Identities=31% Similarity=0.453 Sum_probs=193.3
Q ss_pred EeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc-ceEEEecCCCCCCCCCCHHH
Q 000913 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDNHIGEMTVRE 245 (1226)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1226)
+|+|+|+.|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999999 99999999999998775 89999999999999999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000913 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1226)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1226)
|+.|+.+.++... ++.+.+++++.+.|+|++..|.. +++||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 9999998875311 12345678889999999988754 56799
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEE
Q 000913 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1226)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1226)
|||||||+|||||+.+|++++||||+|+||...+..+...|+++.+ .-++++|.++|+..|+..++|+|++|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~-~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHE-RLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHH-hcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999998654 455666778999999999999999999999999
Q ss_pred ecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000913 406 QGPRELVLEFFASMGFRCPKRKGVADFL 433 (1226)
Q Consensus 406 ~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1226)
.|++.++ |..|.+.-+|.|+
T Consensus 215 ~g~p~el--------y~~P~n~fVA~Fi 234 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFI 234 (338)
T ss_pred cCChHHH--------hhCccchhhhhhc
Confidence 9999998 4567777777775
No 58
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.5e-41 Score=361.55 Aligned_cols=208 Identities=27% Similarity=0.417 Sum_probs=175.7
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+.+||+..+.... ....+|++||++|++||++||||||||||||||++|.|... +.+|.|.++|.++..
T Consensus 3 ~~~~v~k~y~~~~---------~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~~ 71 (226)
T COG1136 3 ELKNVSKIYGLGG---------EKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLTK 71 (226)
T ss_pred EEeeeEEEeccCC---------cceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcCc
Confidence 4566765554321 22579999999999999999999999999999999999877 468999999976542
Q ss_pred ------hhh-cceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccc-cccCCCCCCCC
Q 000913 937 ------ETF-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-SLVGLPGVSGL 1008 (1226)
Q Consensus 937 ------~~~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~~g~~~~~~L 1008 (1226)
..+ ++.+|||+|+..+.|.+||+||+.+...+.... ...+++.++++++.+||.+..+ .. +..|
T Consensus 72 l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eL 143 (226)
T COG1136 72 LSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSEL 143 (226)
T ss_pred CCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhc
Confidence 123 456999999999999999999999876554322 2256677899999999987666 54 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
||||||||+|||||+.+|+|||.||||.+||++++..|++++++++++ |+|||++|||| ++...|||++.|++|+
T Consensus 144 SGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 144 SGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999999999999999999999999999865 99999999998 4788999999999754
No 59
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-41 Score=369.45 Aligned_cols=210 Identities=34% Similarity=0.463 Sum_probs=180.4
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc---ceEEEecCCCCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEM 241 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1226)
++||+|+||.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.+|||||.....+.+
T Consensus 15 ~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~ 91 (258)
T COG1120 15 KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGL 91 (258)
T ss_pred eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCc
Confidence 45999999999999999999999999999999999999998 99999999999877654 7899999998888999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+|-+.++..-.. + ... ...++....++..|+.+|+.+.++..+.
T Consensus 92 tV~d~V~~GR~p~~-~-----------------~~~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~---- 137 (258)
T COG1120 92 TVYELVLLGRYPHL-G-----------------LFG------------RPSKEDEEIVEEALELLGLEHLADRPVD---- 137 (258)
T ss_pred EEeehHhhcCCccc-c-----------------ccc------------CCCHhHHHHHHHHHHHhCcHHHhcCccc----
Confidence 99999998853210 0 000 0011122357888999999999987654
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
.|||||||||.||+||+++|++|+||||||+||...+.++++.++++.+..+.| ||.+.|+...+.++||++++|++|
T Consensus 138 -~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~t-vv~vlHDlN~A~ryad~~i~lk~G 215 (258)
T COG1120 138 -ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLT-VVMVLHDLNLAARYADHLILLKDG 215 (258)
T ss_pred -ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHHHHhCCEEEEEECC
Confidence 599999999999999999999999999999999999999999999998754545 555778999999999999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
+++.+|++++++
T Consensus 216 ~i~a~G~p~evl 227 (258)
T COG1120 216 KIVAQGTPEEVL 227 (258)
T ss_pred eEEeecCcchhc
Confidence 999999998775
No 60
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=383.43 Aligned_cols=223 Identities=30% Similarity=0.436 Sum_probs=197.0
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1226)
..+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|.++....+ +|.+++|+|+-.+||+|||
T Consensus 18 ~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV 94 (352)
T COG3842 18 FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTV 94 (352)
T ss_pred eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcH
Confidence 45999999999999999999999999999999999999999 9999999999998877 4889999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+||+.|+.+.++... ..+.+.+++++|+.++|++.++ +.+.+
T Consensus 95 ~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~-----R~p~q 136 (352)
T COG3842 95 EENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD-----RKPHQ 136 (352)
T ss_pred HHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh-----hChhh
Confidence 999999987443111 1123456888999999998766 45567
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||+|||+|||||+.+|++|+||||.|+||..-+.++...|+++.+.. +.+.|.++|+..|++.++|+|++|++|+|
T Consensus 137 LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~I 215 (352)
T COG3842 137 LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGRI 215 (352)
T ss_pred hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCce
Confidence 99999999999999999999999999999999999999999999987765 55556689999999999999999999999
Q ss_pred EEecChhHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 000913 404 VYQGPRELVLEFFASMGFRCPKRKGVADFLQEVT 437 (1226)
Q Consensus 404 v~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~ 437 (1226)
...|+++++ |..|...-+|+|+-+..
T Consensus 216 ~Q~gtP~ei--------Y~~P~~~fVA~FiG~~N 241 (352)
T COG3842 216 EQVGTPEEI--------YERPATRFVADFIGESN 241 (352)
T ss_pred eecCCHHHH--------hhCcchHHHHHHhCcce
Confidence 999999998 56788888889886543
No 61
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.7e-42 Score=356.60 Aligned_cols=213 Identities=26% Similarity=0.365 Sum_probs=191.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++|+||+..+. ++.+++|+|++|++||+++++|||||||||+|++|.+... +.+|+|+|||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 57888876663 4679999999999999999999999999999999999887 57899999999875
Q ss_pred h---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCH
Q 000913 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~LSg 1010 (1226)
. ..+||.+|||-|+-.+||++||.||+.+-..+. ..++++.+++++|+|+++||.+ +.+++ +..|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 457889999999999999999999999876654 3567888999999999999985 77877 568999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
||+|||.+||||+++|+||+||||++.|||.++..+++.++++.++ |+|||++|||.. |.+.+.||+.+|+. |+++.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999998654 999999999987 78999999999985 78988
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.+++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 8875
No 62
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-41 Score=357.16 Aligned_cols=194 Identities=27% Similarity=0.408 Sum_probs=170.8
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
..+|+|||++|.+||+++|+|||||||||||++|+|+..|+ +|+|.++|.++ ..+...++||+|++.++|.+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHH
Confidence 45999999999999999999999999999999999999998 99999999987 34567899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.|+...++... .+...+++.+|+.+||....| +++.+|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~-----~~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED-----KYPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh-----cCcccc
Confidence 99999987764211 112235678899999998777 456789
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC--Ce
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD--GQ 402 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~--G~ 402 (1226)
||||||||+|||||+.+|++|+||||+++||+.|+..+.+.|.++.+..+ .+|+.++|+..|+..++|||++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEEEecCCCcc
Confidence 99999999999999999999999999999999999999999998887554 5555689999999999999999998 44
Q ss_pred E
Q 000913 403 I 403 (1226)
Q Consensus 403 i 403 (1226)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 5
No 63
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=352.14 Aligned_cols=220 Identities=26% Similarity=0.334 Sum_probs=188.1
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|++..++ +++++|+|||+.|++||++||+|+|||||||||++|.|... +.+|+|.++|..+
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 478888887764 35689999999999999999999999999999999999765 5689999999764
Q ss_pred Ch------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHcCCCcccccccCCC
Q 000913 935 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-----PEVDSETRKMFIDEVMELVELNPLRQSLVGLP 1003 (1226)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 1003 (1226)
.. ..+++.+||++|++.+.+.+||.+|+..+..-+.+ -....++.+..+-++|+.+|+.+.+....
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 34677899999999999999999999876422211 12333445566778999999998887774
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
..|||||+|||+|||||+.+|+||+.|||+++|||.+++.||+.|+++++ +|.|||++.||... ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 46999999999999999999999999999999999999999999999975 59999999999875 778999999998
Q ss_pred cCcEEEEeCCCCc
Q 000913 1083 RGGQEIYVGPLGR 1095 (1226)
Q Consensus 1083 ~Gg~~~y~G~~~~ 1095 (1226)
. |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 6 79999999754
No 64
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=344.77 Aligned_cols=201 Identities=28% Similarity=0.370 Sum_probs=184.6
Q ss_pred eEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhcceeeEeecCCCCCCCCCH
Q 000913 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTI 958 (1226)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 958 (1226)
.++++||||+++.||++||+|+|||||||+|++|++... +.+|.|.++|.+... ...++.+|.++.+--++..||+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 348999999999999999999999999999999999887 568999999998643 4577889999988888999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000913 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1226)
Q Consensus 959 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1226)
+|||.|.+.+.. ....+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 999999998864 4567778899999999999999999976 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|..+.+.+.+.++++.+.|++||++||.+. ++..+||++++|++ |++++.|..
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 999999999999999988999999999986 78889999999997 799999985
No 65
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.5e-40 Score=376.72 Aligned_cols=212 Identities=34% Similarity=0.488 Sum_probs=184.4
Q ss_pred cceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC--CccceEEEecCCCCCCCCC
Q 000913 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1226)
.+.+|+||||.|++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+|||+|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 367999999999999999999999999999999999999998 99999999887652 3357899999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+|||.|.+++++.... .....++++++.+||++..++ .+
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~-----~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANK-----KV 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCc-----ch
Confidence 999999999988764210 112357889999999984443 45
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
++||+||||||+||.||+++|++|||||||+|||+.++.++.+.|++++.. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 679999999999999999999999999999999999999999999999864 4355555778889999999999999999
Q ss_pred eEEEecChhHHHHHHHh
Q 000913 402 QIVYQGPRELVLEFFAS 418 (1226)
Q Consensus 402 ~iv~~G~~~~~~~~F~~ 418 (1226)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998776544
No 66
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-40 Score=348.29 Aligned_cols=209 Identities=26% Similarity=0.370 Sum_probs=178.5
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1226)
+.||+|||++|++||+++|+|||||||||||++|.|++.|+ +|+|.++|.++.+... ++.+|+++|+-.+|
T Consensus 21 ~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALF 97 (263)
T COG1127 21 RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALF 97 (263)
T ss_pred EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccc
Confidence 45999999999999999999999999999999999999999 9999999999876643 36799999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
..+||+||+.|..+-... .|+ ...+..+..-|+..||+.. +++
T Consensus 98 ssltV~eNVafplre~~~-------------------lp~--------------~~i~~lv~~KL~~VGL~~~----~~~ 140 (263)
T COG1127 98 SSLTVFENVAFPLREHTK-------------------LPE--------------SLIRELVLMKLELVGLRGA----AAD 140 (263)
T ss_pred cccchhHhhheehHhhcc-------------------CCH--------------HHHHHHHHHHHHhcCCChh----hhh
Confidence 999999999997653311 010 1112233444778899754 345
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
.++.+||||++||+++|||++.+|+++|+||||+||||.++..+.+.++++.+..+. +++.++|+.++++..+|+|++|
T Consensus 141 ~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~-T~i~VTHDl~s~~~i~Drv~~L 219 (263)
T COG1127 141 LYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGL-TVIMVTHDLDSLLTIADRVAVL 219 (263)
T ss_pred hCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCC-EEEEEECChHHHHhhhceEEEE
Confidence 678889999999999999999999999999999999999999999999998776554 4555889999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000913 399 SDGQIVYQGPRELVLE 414 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1226)
.+|+|+.+|+++++.+
T Consensus 220 ~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 220 ADGKVIAEGTPEELLA 235 (263)
T ss_pred eCCEEEEeCCHHHHHh
Confidence 9999999999999864
No 67
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-41 Score=360.36 Aligned_cols=223 Identities=29% Similarity=0.434 Sum_probs=188.4
Q ss_pred cceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCc---cCCCCCc-cceEEEecCCCCCCC
Q 000913 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH---DMDEFVP-QRTAAYISQHDNHIG 239 (1226)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~---~~~~~~~-~~~~~yv~Q~d~~~~ 239 (1226)
...+++|||+.|+.||+++|+|||||||||||++|||+..|+ +|.|.+||. +.++... .|.||||+|+-.+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 355899999999999999999999999999999999999999 999999999 6655433 388999999999999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.|||.+||+|+.+++.... . ..+.+.+++++|+.+.|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~~p-----~---------------------------~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKERP-----S---------------------------EAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhcccccccCC-----C---------------------------hhhHHHHHHHHHHHhcccchhh-----c
Confidence 9999999999997762100 0 1123456788899999987655 6
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
++.+|||||||||++||||+..|++|+||||+++||..-+..+-+.|+++....+ .+.+.++|+..|++++||+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~-~ttvfVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLG-VTTVFVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhC-ceEEEEeCCHHHHHhhcceEEEec
Confidence 6788999999999999999999999999999999999999999999999765444 445558899999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHH
Q 000913 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~ 435 (1226)
+|+|...||++++. .-|...-++.|+-+
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999984 34555555555433
No 68
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-41 Score=361.25 Aligned_cols=204 Identities=29% Similarity=0.450 Sum_probs=185.8
Q ss_pred ceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc---cCCh-hhhcceeeEeecCCCCCCC
Q 000913 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY---PKKQ-ETFARISGYCEQNDIHSPF 955 (1226)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~~ 955 (1226)
...+++|||+.|+.||++||+|||||||||||++|||..+ +..|.|.+||. +.++ ....|.+|||+|+..+++.
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4578999999999999999999999999999999999987 56899999998 5444 3456789999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000913 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1226)
Q Consensus 956 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPT 1035 (1226)
|||.+|+.|+...+ ...++..+.+.+|.++|+.+.|+++.+.+ +..|||||||||++||||+.+|++|+||||+
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998776 34456778889999999999999999988 4679999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1036 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
++||+.-++.+.+.|+++.+. |.|+|++|||+. ++++.+|||++|++ |++...||.
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p 222 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPP 222 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCH
Confidence 999999999999999999766 999999999997 79999999999997 689988886
No 69
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-40 Score=342.41 Aligned_cols=215 Identities=26% Similarity=0.389 Sum_probs=180.2
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1226)
+++|+|||+.|++|||++|+|||||||||||++|.|+.+++ +|+|.+||.++..... ++.+||++|+..+.
T Consensus 17 ~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv 93 (258)
T COG3638 17 HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLV 93 (258)
T ss_pred ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcc
Confidence 45999999999999999999999999999999999999998 9999999988765542 46899999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+.+||.+|+..+..-+. .... .-.++.+ ++.+..+-..|+.+|+.+.+.+..+
T Consensus 94 ~r~sv~~NVl~grl~~~--s~~~---------slfglfs---------------k~dk~~Al~aLervgi~~~A~qra~- 146 (258)
T COG3638 94 PRLSVLENVLLGRLGYT--STWR---------SLFGLFS---------------KEDKAQALDALERVGILDKAYQRAS- 146 (258)
T ss_pred cccHHHHHHHhhhcccc--hHHH---------HHhCCCC---------------HHHHHHHHHHHHHcCcHHHHHHHhc-
Confidence 99999999998763321 1100 0111111 1223345567899999988887765
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
.|||||+|||+|||+|+.+|++++.|||+++||+.++.++++.|+++....+.|+|+. +|...-+.++||||+-|
T Consensus 147 ----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~n-LH~vdlA~~Y~~Riigl 221 (258)
T COG3638 147 ----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVN-LHQVDLAKKYADRIIGL 221 (258)
T ss_pred ----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEE-echHHHHHHHHhhheEe
Confidence 4999999999999999999999999999999999999999999999988666666665 55678999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000913 399 SDGQIVYQGPRELVLE 414 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1226)
++|+|+|+||++++-+
T Consensus 222 ~~G~ivfDg~~~el~~ 237 (258)
T COG3638 222 KAGRIVFDGPASELTD 237 (258)
T ss_pred cCCcEEEeCChhhhhH
Confidence 9999999999988654
No 70
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-40 Score=352.76 Aligned_cols=208 Identities=27% Similarity=0.443 Sum_probs=175.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCC--CCCCCCCH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHD--NHIGEMTV 243 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 243 (1226)
++|+|||+.+++|++++|+||||||||||+|+|.|++.|. +|+|.++|.+..+...+..||||||.. .+-.-+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 3999999999999999999999999999999999999998 999999999887776678999999953 33445799
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+|.+..+..-+. + ..... ..+.+..++++|+.+|+.+.+|..+|+
T Consensus 95 ~d~V~~g~~~~~-g----~~~~~-------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~----- 139 (254)
T COG1121 95 KDVVLLGRYGKK-G----WFRRL-------------------------NKKDKEKVDEALERVGMEDLRDRQIGE----- 139 (254)
T ss_pred HHHHHccCcccc-c----ccccc-------------------------cHHHHHHHHHHHHHcCchhhhCCcccc-----
Confidence 999988642210 0 00000 111234678899999999999988875
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.+. +.+|+.++|+...+.++||+|+.|+. ++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-HL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-ee
Confidence 9999999999999999999999999999999999999999999998764 45556689999999999999999965 78
Q ss_pred EEecChhHHHH
Q 000913 404 VYQGPRELVLE 414 (1226)
Q Consensus 404 v~~G~~~~~~~ 414 (1226)
++.|+++++.+
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999988753
No 71
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.8e-40 Score=332.08 Aligned_cols=213 Identities=25% Similarity=0.327 Sum_probs=185.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
+.|++|+..|+. .+.+|+||||++++||++-|+|||||||||||++|.+... +..|.|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 578888877753 2569999999999999999999999999999999999766 56899999999864
Q ss_pred h------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
. ...+|.+|+|+||..+.+..||+||+.|...... .+..+.+++|.++|+.+||.+..+.+ +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 2367889999999999999999999999866653 35667788999999999999988877 46799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||+|||+||||++.+|++|+.||||.+|||..+..||+++.++.+.|.|||+.|||... +-.+-.+++.|.+ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999999999999999998643 4445568888886 68876
Q ss_pred eCC
Q 000913 1090 VGP 1092 (1226)
Q Consensus 1090 ~G~ 1092 (1226)
...
T Consensus 218 d~~ 220 (223)
T COG2884 218 DES 220 (223)
T ss_pred ccc
Confidence 543
No 72
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.4e-39 Score=372.51 Aligned_cols=215 Identities=27% Similarity=0.405 Sum_probs=188.6
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++++|++..++ ++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 6 ~~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~ 70 (306)
T PRK13537 6 APIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEP 70 (306)
T ss_pred ceEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEe
Confidence 3588899988773 2469999999999999999999999999999999999876 568999999988
Q ss_pred CCh--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
... ...++.+|||+|++.+++.+||+||+.|.+.++. .+..+..++++++++.++|.+..++.+ ++||||
T Consensus 71 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (306)
T PRK13537 71 VPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGG 142 (306)
T ss_pred cccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHH
Confidence 643 2356789999999999999999999998765542 233444567889999999998888774 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|||||+||+||+++|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g 220 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEG 220 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999878999999999987 68889999999986 7999999
Q ss_pred CC
Q 000913 1092 PL 1093 (1226)
Q Consensus 1092 ~~ 1093 (1226)
+.
T Consensus 221 ~~ 222 (306)
T PRK13537 221 AP 222 (306)
T ss_pred CH
Confidence 85
No 73
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.9e-40 Score=409.95 Aligned_cols=258 Identities=27% Similarity=0.362 Sum_probs=211.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.|+.+...+|+.++++.++|.=..+ .....+....+++|+|++|.+...
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~~-----~~~~~~~~~g~I~~~nvsf~y~~~-------------------------- 484 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGDK-----TLIHLPKLQGEIEFENVSFRYGPD-------------------------- 484 (709)
T ss_pred HHHHHHHHHHHHHHhcCCccccccc-----ccccccccCceEEEEEEEEEeCCC--------------------------
Confidence 7889999999999999988821111 023344456789999999998531
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
...+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+|+++..+ |+.++||+|+
T Consensus 485 ------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~ 555 (709)
T COG2274 485 ------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQD 555 (709)
T ss_pred ------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEccc
Confidence 125999999999999999999999999999999999999998 9999999999887765 5899999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+ ++.+.||+||+.++. +....|...++++....+ -.+..++..+||
T Consensus 556 ~-~Lf~gSI~eNi~l~~----p~~~~e~i~~A~~~ag~~-----------------------------~fI~~lP~gy~t 601 (709)
T COG2274 556 P-FLFSGSIRENIALGN----PEATDEEIIEAAQLAGAH-----------------------------EFIENLPMGYDT 601 (709)
T ss_pred c-hhhcCcHHHHHhcCC----CCCCHHHHHHHHHHhCcH-----------------------------HHHHhccccccc
Confidence 6 555689999999875 333334444444432211 114578999999
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.||+.+. +||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++. .++|+|+..| +..+.+.||+
T Consensus 602 ~v~E~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaH--Rl~ti~~adr 676 (709)
T COG2274 602 PVGEGGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAH--RLSTIRSADR 676 (709)
T ss_pred ccccCCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEc--cchHhhhccE
Confidence 9998665 699999999999999999999999999999999999999999999865 3566666543 4678999999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|+||++|+|+.+|+++++++
T Consensus 677 IiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 677 IIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred EEEccCCceeccCCHHHHHH
Confidence 99999999999999999986
No 74
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-40 Score=370.18 Aligned_cols=214 Identities=28% Similarity=0.399 Sum_probs=192.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|++..+. +..+|+|||++|+.||+++|+|||||||||||++|||+.. +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 477888877763 2229999999999999999999999999999999999987 6789999999988
Q ss_pred Ch-hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
+. ...+|.+++|+|+..++|.|||+||+.|+..++. .++++.+++|.++.+.|+|.++.+++ +++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 66 3456889999999999999999999999977663 45678889999999999999999998 467999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. |.+.++||+.+|+ +|++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998754 899999999975 7999999999999 589999997
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
+
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 6
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-40 Score=336.35 Aligned_cols=221 Identities=26% Similarity=0.399 Sum_probs=178.8
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNH 237 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1226)
+.+|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.|+|+++.+. ..|+.+|.|+|.++-
T Consensus 20 ~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnP 99 (253)
T COG1117 20 KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNP 99 (253)
T ss_pred hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCC
Confidence 349999999999999999999999999999999998865 3468899999999997553 236899999999999
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-cccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMV 316 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 316 (1226)
|| +|++||+.|+.+++|... +.+. .+++..|+.-+|-+ ..|.+
T Consensus 100 Fp-~SIydNVayG~r~~g~~~--~~ld--------------------------------eiVe~sLk~AaLWdEVKDrL- 143 (253)
T COG1117 100 FP-MSIYDNVAYGLRLHGIKD--KELD--------------------------------EIVESSLKKAALWDEVKDRL- 143 (253)
T ss_pred CC-chHHHHHHHhHHhhccch--HHHH--------------------------------HHHHHHHHHhHhHHHhHHHh-
Confidence 99 999999999999887532 1111 22333444444432 22222
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
++...+|||||+||++|||+|+-+|+||+||||||+|||.++..|-+.+.++.+ .-+||.++|.+.++.+..|+..
T Consensus 144 -~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~ta 219 (253)
T COG1117 144 -HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTA 219 (253)
T ss_pred -hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhh
Confidence 122447999999999999999999999999999999999999999999998752 3445557899999999999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000913 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1226)
.+..|++|++|+.+++ |.-|.++...||+
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999987 4556666666654
No 76
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-40 Score=372.94 Aligned_cols=215 Identities=27% Similarity=0.386 Sum_probs=192.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++||+..+. +..+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578888877663 4689999999999999999999999999999999999887 5689999999987
Q ss_pred Chh-hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 935 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
... ..+|.+|+|+|+-.+||+|||+||+.|+..++ ....+++.+++|+++++.++|.++.++. +..|||||+
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 653 45788999999999999999999999987633 3345667888999999999999999988 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+|||||+.+|++|+||||.|+||..-+..+..-|+++.+ .|.|.|++|||.. |.+.++|||.+|++ |++...|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 999999999999999999999999999999999999999864 4999999999986 78999999999986 79998888
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
+
T Consensus 221 P 221 (352)
T COG3842 221 P 221 (352)
T ss_pred H
Confidence 6
No 77
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.9e-39 Score=345.40 Aligned_cols=196 Identities=30% Similarity=0.439 Sum_probs=167.1
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1226)
.++|+|||+.|++||+++|+|||||||||||++|+|+..|+ +|.|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999998876542 3679999999999
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
+|++||+||+.+++.+.+.... +.....+.+++.+||.+..+.
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~--- 137 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLK--- 137 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhcc---
Confidence 9999999999988766543211 112345778899999865551
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEE
Q 000913 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1226)
..+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++.+..+.|+|+ ++|+ +++...|||++.
T Consensus 138 -~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~-VTHd-~~lA~~~dr~i~ 214 (226)
T COG1136 138 -KKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIM-VTHD-PELAKYADRVIE 214 (226)
T ss_pred -CCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEE-EcCC-HHHHHhCCEEEE
Confidence 3345799999999999999999999999999999999999999999999988754445544 5665 678889999999
Q ss_pred EcCCeE
Q 000913 398 LSDGQI 403 (1226)
Q Consensus 398 L~~G~i 403 (1226)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999994
No 78
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=332.70 Aligned_cols=217 Identities=23% Similarity=0.324 Sum_probs=187.5
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCC---CCceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 931 (1226)
.++.+|++.+|. ++.+|+|||+.|++++++||||||||||||||++|.... ++-.++|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 577888887774 467999999999999999999999999999999998743 3446789999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 1005 (1226)
.++.. ..+|+.+|.|+|.+..|| +|++||+.|+.++....+ ++.++.|++.|+...|.+ .+|++-.. .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 87643 357889999999999999 999999999987765443 677888999999998865 34444322 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
.+|||||+|||||||+|+.+|+||+||||||+|||.+...|-+++.++. +.-|||++||.+. ...+..|+..++.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 5799999999999999999999999999999999999999999999997 4699999999986 57888999999986 6
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
+++.+|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999986
No 79
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=329.72 Aligned_cols=206 Identities=32% Similarity=0.377 Sum_probs=182.3
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1226)
..+++||||.++.|++++|+|||||||||+|++|++++.|+ +|.|++||.+..+.. .++.+|.++-+..++..||
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT 91 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLT 91 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhh
Confidence 34899999999999999999999999999999999999999 999999999875432 3588999998888999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
++|||.|.+++.+.. +.+.+.+++.+.+.|+|.+|.|+.+|+
T Consensus 92 ~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~~---- 133 (245)
T COG4555 92 ARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVGE---- 133 (245)
T ss_pred HHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHhh----
Confidence 999999988775421 122345678899999999999999885
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
+|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++. ..+.+|+..+|..+|+..+||+|++|++|+
T Consensus 134 -~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrvivlh~Ge 210 (245)
T COG4555 134 -FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIVLHKGE 210 (245)
T ss_pred -hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEEEecCc
Confidence 99999999999999999999999999999999999999999999863 345666678899999999999999999999
Q ss_pred EEEecChhHHHH
Q 000913 403 IVYQGPRELVLE 414 (1226)
Q Consensus 403 iv~~G~~~~~~~ 414 (1226)
+|+.|+.+++..
T Consensus 211 vv~~gs~~~l~~ 222 (245)
T COG4555 211 VVLEGSIEALDA 222 (245)
T ss_pred EEEcCCHHHHHH
Confidence 999999988754
No 80
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-39 Score=372.22 Aligned_cols=229 Identities=24% Similarity=0.358 Sum_probs=194.8
Q ss_pred cCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCC
Q 000913 110 VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSS 189 (1226)
Q Consensus 110 ~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 189 (1226)
..+..|...|+|+||++++.. +++||+++||+|++|+-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~~---------------------------------k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYGP---------------------------------KRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeCC---------------------------------CCceecceeEEecCCCEEEEECCCCC
Confidence 567778889999999999842 23499999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHH
Q 000913 190 GKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTEL 266 (1226)
Q Consensus 190 GKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 266 (1226)
||||+|++|.++++ . +|+|++||+++++..+ |+.||||||+ .++++-||.+||.|+. +...++...++
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd-~~LFndTIl~NI~YGn----~sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQD-SVLFNDTILYNIKYGN----PSASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCc-ccccchhHHHHhhcCC----CCcCHHHHHHH
Confidence 99999999999998 5 9999999999987654 5789999995 5566679999999985 33455666666
Q ss_pred HHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccce
Q 000913 267 ARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALF 346 (1226)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vll 346 (1226)
|++...++ -+..|++.++|.||+++.. |||||||||++|||++.+|+|++
T Consensus 461 ~k~a~~hd-----------------------------~i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAGLHD-----------------------------VISRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcCcHH-----------------------------HHHhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEE
Confidence 66543211 1456899999999999875 99999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecChhHHHH
Q 000913 347 MDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 347 LDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 414 (1226)
+|||||+||+.|..++++.+... ..++|+|+.+| ...+..-||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~IvH--~l~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMIVH--RLDLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEEEe--cchhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999873 35667766554 346788899999999999999999999976
No 81
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.7e-39 Score=368.72 Aligned_cols=217 Identities=23% Similarity=0.303 Sum_probs=187.2
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++.+. ..+.+|+||||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~~---------~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQGT---------KTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCCC---------cceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 67889988774210 12469999999999999999999999999999999999876 56899999998764
Q ss_pred hh------hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
.. ..++.+||++|+..+++..||+||+.|..... ..+.++.++++.++++.++|.+..+..+ ..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999999999999999875433 2345566678999999999998888764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~ 1088 (1226)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999986 47789999999985 7999
Q ss_pred EeCCC
Q 000913 1089 YVGPL 1093 (1226)
Q Consensus 1089 y~G~~ 1093 (1226)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 82
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.6e-38 Score=366.46 Aligned_cols=206 Identities=25% Similarity=0.349 Sum_probs=177.2
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1226)
.++|+||||+|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 45999999999999999999999999999999999999998 9999999998876532 45799999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+.+||+||+.|+....+... .+...++.++++.+||.+..|..
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~--- 137 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSY--- 137 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC---
Confidence 99999999999765432110 01123456789999998877755
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
+..|||||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.+..+.| |+.++|+...+.++||+|++|
T Consensus 138 --~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~t-iiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 138 --PSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLT-ILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred --hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHHHhCCEEEEE
Confidence 45699999999999999999999999999999999999999999999987543444 555788899999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 83
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-38 Score=353.10 Aligned_cols=213 Identities=24% Similarity=0.350 Sum_probs=181.4
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5678877763 2469999999999999999999999999999999999876 468999999987532
Q ss_pred ------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 937 ------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
..+++.++|++|++.+++.+||+||+.+...... ..+.++.++++.++++.++|.+..++.+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 2345679999999988899999999988643221 1234445567889999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 999999999999999999999999999999999999999999976 4899999999987 47788999999986 78999
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 8874
No 84
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.7e-38 Score=369.02 Aligned_cols=205 Identities=28% Similarity=0.407 Sum_probs=177.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..+||.+||+
T Consensus 18 ~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (353)
T TIGR03265 18 TALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVA 94 (353)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHH
Confidence 4899999999999999999999999999999999999998 9999999998865543 47899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.|+.+.++... .+....++.+++.+||++..|.. +..|
T Consensus 95 eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~L~~~~~~~-----~~~L 135 (353)
T TIGR03265 95 DNIAYGLKNRGMGR----------------------------------AEVAERVAELLDLVGLPGSERKY-----PGQL 135 (353)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCCchhhCC-----hhhC
Confidence 99999875432110 01123567889999999877754 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 136 SgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~ 214 (353)
T TIGR03265 136 SGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVIE 214 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 445555788899999999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
+.|+++++.
T Consensus 215 ~~g~~~~~~ 223 (353)
T TIGR03265 215 QVGTPQEIY 223 (353)
T ss_pred EEcCHHHHH
Confidence 999998874
No 85
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-38 Score=367.72 Aligned_cols=205 Identities=24% Similarity=0.382 Sum_probs=178.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
.+|+|+|+.+++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..++|++||+
T Consensus 20 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~ 96 (351)
T PRK11432 20 TVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLG 96 (351)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998876554 37899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.|+.+.++... .+....++++++.+||.+..+.. ++.|
T Consensus 97 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~L 137 (351)
T PRK11432 97 ENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQI 137 (351)
T ss_pred HHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999875443210 01123467789999998766644 5579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+|||||+.+|++|||||||++||+.++.++.+.|+++.+.. +++++.++|+..++.+++|+|++|++|+++
T Consensus 138 SgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~G~i~ 216 (351)
T PRK11432 138 SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNKGKIM 216 (351)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999886533 445566888999999999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
..|+++++.
T Consensus 217 ~~g~~~~~~ 225 (351)
T PRK11432 217 QIGSPQELY 225 (351)
T ss_pred EEcCHHHHH
Confidence 999999874
No 86
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-38 Score=368.70 Aligned_cols=205 Identities=25% Similarity=0.363 Sum_probs=177.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..++|++||+
T Consensus 18 ~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (356)
T PRK11650 18 QVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVR 94 (356)
T ss_pred EEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999998876544 37899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.|+.+..+... .+....++++++.+||++..+.. ++.|
T Consensus 95 eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 135 (356)
T PRK11650 95 ENMAYGLKIRGMPK----------------------------------AEIEERVAEAARILELEPLLDRK-----PREL 135 (356)
T ss_pred HHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCC-----hhhC
Confidence 99999875432110 01123467789999998877654 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 136 SgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i~ 214 (356)
T PRK11650 136 SGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVAE 214 (356)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999999876533 455566788899999999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
..|+++++.
T Consensus 215 ~~g~~~~~~ 223 (356)
T PRK11650 215 QIGTPVEVY 223 (356)
T ss_pred EECCHHHHH
Confidence 999998874
No 87
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-39 Score=402.86 Aligned_cols=258 Identities=23% Similarity=0.383 Sum_probs=213.5
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCC--CcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL--PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1226)
...++....++++++|..+. +.. -+..+... -..+|+|+||+|.|+.
T Consensus 951 ~~ka~~Aa~~iF~i~dr~~~-----i~~-~~~~~~~~~~~~G~I~~~~V~F~YPs------------------------- 999 (1228)
T KOG0055|consen 951 ISKAKIAAGSIFEILDRKPT-----IDP-DSTSGGKLPNVKGDIEFRNVSFAYPT------------------------- 999 (1228)
T ss_pred HHHHHHHHHHHHHHhcCCCC-----CCC-CCCCCCccccceeEEEEeeeEeeCCC-------------------------
Confidence 45677888889999888774 211 11344333 3567999999999842
Q ss_pred hhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEec
Q 000913 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1226)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~ 232 (1226)
+ +..+||+|+|+++++|+.+||+|||||||||...+|-++|+|+ +|.|.+||+++++++. |+.+|.|+
T Consensus 1000 -----R-P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVs 1070 (1228)
T KOG0055|consen 1000 -----R-PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVS 1070 (1228)
T ss_pred -----C-CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceec
Confidence 2 4567999999999999999999999999999999999999998 9999999999998876 47899999
Q ss_pred CCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccc
Q 000913 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1226)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1226)
|+|.+|. .|+||||.|+.. ....+.+.++++....+++ +.+|++.+
T Consensus 1071 QEP~LF~-~TIrENI~YG~~----~vs~~eIi~Aak~ANaH~F-----------------------------I~sLP~Gy 1116 (1228)
T KOG0055|consen 1071 QEPVLFN-GTIRENIAYGSE----EVSEEEIIEAAKLANAHNF-----------------------------ISSLPQGY 1116 (1228)
T ss_pred cCchhhc-ccHHHHHhccCC----CCCHHHHHHHHHHhhhHHH-----------------------------HhcCcCcc
Confidence 9997775 699999999821 1234455555555444332 56899999
Q ss_pred cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhc
Q 000913 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1226)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 392 (1226)
||.||+++. +||||||||++||||+++||+||||||.||+||+.+.+-+.+.|.+.. .++|+|+.. |+..+.+.+
T Consensus 1117 DT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~IvIA--HRLSTIqna 1191 (1228)
T KOG0055|consen 1117 DTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIVIA--HRLSTIQNA 1191 (1228)
T ss_pred cCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEEEe--cchhhhhcC
Confidence 999999887 599999999999999999999999999999999999999999999864 345555543 567899999
Q ss_pred CcEEEEcCCeEEEecChhHHHH
Q 000913 393 DDIILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~~ 414 (1226)
|.|+|+++|+|+++|+++++++
T Consensus 1192 D~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1192 DVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred CEEEEEECCEEEecccHHHHHh
Confidence 9999999999999999999975
No 88
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.8e-38 Score=367.58 Aligned_cols=206 Identities=23% Similarity=0.347 Sum_probs=178.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCce--eEEEEcCccCCCCCc-cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVS--GTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1226)
.+|+|+|+++++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|+..+++.+|
T Consensus 19 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~t 95 (362)
T TIGR03258 19 TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLK 95 (362)
T ss_pred EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCc
Confidence 4999999999999999999999999999999999999998 8 999999998865543 467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+||+.|+.+..+... .+....++++++.+||++..|..+ +
T Consensus 96 v~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~-----~ 136 (362)
T TIGR03258 96 VEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP-----A 136 (362)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----h
Confidence 9999999875432110 011234677899999988777554 5
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|+
T Consensus 137 ~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~ 216 (362)
T TIGR03258 137 QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGR 216 (362)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999987653324556668899999999999999999999
Q ss_pred EEEecChhHHH
Q 000913 403 IVYQGPRELVL 413 (1226)
Q Consensus 403 iv~~G~~~~~~ 413 (1226)
++..|+++++.
T Consensus 217 i~~~g~~~~~~ 227 (362)
T TIGR03258 217 LAAHGEPQALY 227 (362)
T ss_pred EEEEcCHHHHH
Confidence 99999999874
No 89
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3e-38 Score=364.99 Aligned_cols=215 Identities=27% Similarity=0.378 Sum_probs=187.9
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++++|++..++ ++.+|+||||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEE
Confidence 3588999988873 3569999999999999999999999999999999999876 568999999987
Q ss_pred CCh--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
... ...++.+||++|++.+++.+||+|++.|.+.++. .+..+..+.++++++.++|.+..++.+ +.||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2356779999999999999999999998665442 233444556788999999998888774 469999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|||||+||+||+++|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999987 68889999999986 7999999
Q ss_pred CC
Q 000913 1092 PL 1093 (1226)
Q Consensus 1092 ~~ 1093 (1226)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 85
No 90
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-40 Score=364.81 Aligned_cols=257 Identities=21% Similarity=0.348 Sum_probs=216.6
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.|..-.-+|+.++++++++| +++...+..+..++..|.|+||++.+++
T Consensus 502 iQ~nfiDmEnmfdllkee~e-----Vvd~P~a~pl~~~~G~i~fsnvtF~Y~p--------------------------- 549 (790)
T KOG0056|consen 502 IQKNFIDMENMFDLLKEEPE-----VVDLPGAPPLKVTQGKIEFSNVTFAYDP--------------------------- 549 (790)
T ss_pred HHHhhhhHHHHHHHhhcCch-----hhcCCCCCCccccCCeEEEEEeEEecCC---------------------------
Confidence 45666678999999999999 8888888888889999999999999863
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~---~~~~~~yv~Q~ 234 (1226)
.+++|+||||++.||+.+||+||||+||||+|++|.++++.+ +|.|+++|++++... .|+.||.||||
T Consensus 550 ------~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQD 620 (790)
T KOG0056|consen 550 ------GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQD 620 (790)
T ss_pred ------CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCc
Confidence 245999999999999999999999999999999999999988 999999999986543 45789999996
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
..+| +.|+..||.|+. ++...|.+.++++... +- -+++++++.++|
T Consensus 621 tvLF-NdTI~yNIryak----~~AsneevyaAAkAA~--------------------------IH---drIl~fPegY~t 666 (790)
T KOG0056|consen 621 TVLF-NDTILYNIRYAK----PSASNEEVYAAAKAAQ--------------------------IH---DRILQFPEGYNT 666 (790)
T ss_pred ceee-cceeeeheeecC----CCCChHHHHHHHHHhh--------------------------HH---HHHhcCchhhhh
Confidence 6555 569999999874 3333333333332211 11 247899999999
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.||+++.+ |||||||||+|||+++..|.+++|||.||+||..+..+|..+|.+++. ++|+|+.. |+..+.-.+|.
T Consensus 667 ~VGERGLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA--HRLSTivnAD~ 741 (790)
T KOG0056|consen 667 RVGERGLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA--HRLSTIVNADL 741 (790)
T ss_pred hhhhcccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe--eeehheecccE
Confidence 99999997 999999999999999999999999999999999999999999999874 45555443 45677778999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|+++++|+|++.|.++|++.
T Consensus 742 ILvi~~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 742 ILVISNGRIVERGRHEELLK 761 (790)
T ss_pred EEEEeCCeEeecCcHHHHHh
Confidence 99999999999999999875
No 91
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=368.92 Aligned_cols=214 Identities=25% Similarity=0.366 Sum_probs=187.4
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|++..++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 67888887762 12469999999999999999999999999999999999876 56899999998764
Q ss_pred h-hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 936 Q-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 936 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
. ...++.+|||+|++.++|.+||+||+.|+...+ ..+..+.+++++++++.++|.++.++.+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 3 223478999999999999999999999986533 2345566678999999999999888774 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
||+|||||+.+|+||+||||||+||+.++..+.+.|+++.++ |.|||++||++. ++.+++|++++|++ |+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 999999999986 68899999999985 799999985
No 92
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.2e-38 Score=367.93 Aligned_cols=214 Identities=25% Similarity=0.362 Sum_probs=189.0
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478889988774 2468999999999999999999999999999999999876 5689999999876
Q ss_pred Ch-hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
.. ...+|.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.++.++. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 234577999999999999999999999986543 234566677899999999999988876 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|++ |++++.|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999987 68899999999996 79999998
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 5
No 93
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=346.54 Aligned_cols=214 Identities=23% Similarity=0.334 Sum_probs=189.3
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
+.+++++|+++. ...+|+++|+.+++|+.++|+|+||||||||+++|+|... +.+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeecc
Confidence 678899998852 2479999999999999999999999999999999999887 56799999998855
Q ss_pred ----hhhhcceeeEeecCCCCC-CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 936 ----QETFARISGYCEQNDIHS-PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 936 ----~~~~~~~~gyv~Q~~~~~-~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
...+++.+|||+|++... -.-||.|.+.|+..-. ..+.++.+++++++++.+++.+++++. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 345788899999998653 4579999999986433 355667889999999999999998876 467999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++..+ |+|||++|||.. .+.+++|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 689999999987 58888999999996 79999
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9974
No 94
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-38 Score=365.97 Aligned_cols=214 Identities=24% Similarity=0.376 Sum_probs=189.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 588899988773 2468999999999999999999999999999999999877 5689999999876
Q ss_pred Chh-hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 935 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
... ..+|.+|||+|+..++|.+||+||+.|+...+. .+.++.+++++++++.++|.++.++. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 432 235779999999999999999999999865432 34566677899999999999988876 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+|||||+.+|+||+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999987 68899999999996 79999998
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 221 ~ 221 (351)
T PRK11432 221 P 221 (351)
T ss_pred H
Confidence 5
No 95
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.5e-36 Score=399.25 Aligned_cols=216 Identities=22% Similarity=0.358 Sum_probs=188.0
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++++|+++.++. +++.+|+|||+.+++||+++|+|+|||||||||++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 46889999887741 23579999999999999999999999999999999999876 568999999988
Q ss_pred CCh--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. .+.++.+++++++++.++|.+..++.+ ++||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2345679999999999999999999999876653 233445567899999999998888774 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|||||+||+||+.+|+||+|||||+|||+.+++.++++|+++. +|+|||+|||+++ ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 6999999999986 57778999999986 7899998
Q ss_pred CC
Q 000913 1092 PL 1093 (1226)
Q Consensus 1092 ~~ 1093 (1226)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 74
No 96
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.4e-38 Score=367.12 Aligned_cols=205 Identities=27% Similarity=0.373 Sum_probs=177.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..++|.+||+
T Consensus 28 ~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 104 (375)
T PRK09452 28 EVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVF 104 (375)
T ss_pred EEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998866544 47799999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.|+.+.++... .+....++++++.+||++..+.. +..|
T Consensus 105 eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----p~~L 145 (375)
T PRK09452 105 ENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRK-----PHQL 145 (375)
T ss_pred HHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 99999865432110 01123467789999998877754 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+|||||+.+|++||||||+++||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 146 SgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i~ 224 (375)
T PRK09452 146 SGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRIE 224 (375)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999987643 455566889999999999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
..|+++++.
T Consensus 225 ~~g~~~~i~ 233 (375)
T PRK09452 225 QDGTPREIY 233 (375)
T ss_pred EEcCHHHHH
Confidence 999998873
No 97
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.3e-38 Score=359.42 Aligned_cols=205 Identities=27% Similarity=0.407 Sum_probs=176.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1226)
.+|+|||+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+||
T Consensus 21 ~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 97 (306)
T PRK13537 21 LVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTV 97 (306)
T ss_pred EEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 24679999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+||+.|.+++.+... .+....++.+++.++|.+.+++.++ +
T Consensus 98 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 138 (306)
T PRK13537 98 RENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG-----E 138 (306)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----h
Confidence 999998665543210 0011235678899999988887765 5
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|...++.++||+|++|++|++
T Consensus 139 LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~i 216 (306)
T PRK13537 139 LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGRK 216 (306)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999753 3 45566678889999999999999999999
Q ss_pred EEecChhHHHH
Q 000913 404 VYQGPRELVLE 414 (1226)
Q Consensus 404 v~~G~~~~~~~ 414 (1226)
++.|+++++..
T Consensus 217 ~~~g~~~~l~~ 227 (306)
T PRK13537 217 IAEGAPHALIE 227 (306)
T ss_pred EEECCHHHHHh
Confidence 99999998754
No 98
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.3e-38 Score=365.93 Aligned_cols=214 Identities=24% Similarity=0.334 Sum_probs=188.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEE--EEEEEcCc
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GNITISGY 932 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~--G~i~i~g~ 932 (1226)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCE
Confidence 478899988874 2469999999999999999999999999999999999876 457 99999998
Q ss_pred cCCh-hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 933 PKKQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 933 ~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
+... ...++.+|||+|+..+++.+||+||+.|....+ ..+.++.+++++++++.++|.++.++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 224567999999999999999999999986443 2345566678999999999999888874 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 899999999986 68899999999986 79999
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9985
No 99
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-38 Score=343.36 Aligned_cols=210 Identities=28% Similarity=0.397 Sum_probs=177.3
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4677777763 2469999999999999999999999999999999999876 568999999987643
Q ss_pred -hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000913 937 -ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1226)
Q Consensus 937 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqr 1015 (1226)
...++.++|++|++.+++.+|++|++.+...... ......++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 1234579999999988889999999988653321 233444566889999999988777663 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
++||++|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999986 47788999999986 6777654
No 100
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.3e-38 Score=361.49 Aligned_cols=202 Identities=27% Similarity=0.379 Sum_probs=177.8
Q ss_pred ceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhcceeeEeecCCCCCCCCC
Q 000913 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVT 957 (1226)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 957 (1226)
++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 4579999999999999999999999999999999999876 568999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000913 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1226)
Q Consensus 958 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsg 1037 (1226)
|+|++.|.+.++. .+..+.+++++++++.++|.+..++.+ ..|||||||||+||+||+.+|++|||||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 233445567899999999988877764 56999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1038 LD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999878999999999987 58889999999986 799999975
No 101
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.1e-38 Score=343.22 Aligned_cols=207 Identities=23% Similarity=0.321 Sum_probs=176.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 567888887741 12469999999999999999999999999999999999876 46899999998753
Q ss_pred h------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
. ..+++.++|++|++.+++.+||+||+.+....+. ...++.+++++++++.+++.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1245679999999988899999999998754331 233445567889999999988777664 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999777999999999986 477789999999864
No 102
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.4e-38 Score=358.25 Aligned_cols=214 Identities=27% Similarity=0.373 Sum_probs=184.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+||||++++|+++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 477889988763 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Ch--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000913 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1226)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGq 1012 (1226)
.. ...++.+||++|++.+++.+||+|++.+.+..+. .+..+..+.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2345679999999999999999999987554331 233444556788999999988777764 4699999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
||||+||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999987 57889999999986 78999997
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 103
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.3e-38 Score=318.35 Aligned_cols=200 Identities=27% Similarity=0.397 Sum_probs=174.6
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1226)
..+|+||||.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++..... +|.||+|+|+.-++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 45999999999999999999999999999999999999999 9999999999876542 58999999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+..||.||++|+.+..|... .+.+.++..+|+..||.+.++.
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~---- 133 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARA---- 133 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhc----
Confidence 99999999999988766422 1234567788999999987764
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
.+..|||||+|||+||||++.+|++|+.||||-+||+.++..|++.+.++-+ . +|+|+..+|+..-+..+--+++.|
T Consensus 134 -lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~-GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 134 -LPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-L-GTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred -CccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-c-CcEEEEEeccHHHHHhccCcEEEE
Confidence 4567999999999999999999999999999999999999999999998754 3 555555788888888888899999
Q ss_pred cCCeEEEecC
Q 000913 399 SDGQIVYQGP 408 (1226)
Q Consensus 399 ~~G~iv~~G~ 408 (1226)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 104
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-37 Score=345.11 Aligned_cols=206 Identities=29% Similarity=0.381 Sum_probs=171.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++.+++
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 14 TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 4999999999999999999999999999999999999998 999999999875532 2457999999998999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.++......... .+....++.+++.+||++..++.+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (235)
T cd03261 91 SLTVFENVAFPLREHTRLSE---------------------------------EEIREIVLEKLEAVGLRGAEDLYP--- 134 (235)
T ss_pred CCcHHHHHHHHHhhccCCCH---------------------------------HHHHHHHHHHHHHcCCchhhcCCh---
Confidence 99999999986532110000 001123566788999987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||++|+.+|++++|||||+|||+.++..+++.|+++++..+ ++|+.++|+..++.+++|+|++|+
T Consensus 135 --~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~vsH~~~~~~~~~d~v~~l~ 211 (235)
T cd03261 135 --AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELG-LTSIMVTHDLDTAFAIADRIAVLY 211 (235)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhcCEEEEEE
Confidence 46999999999999999999999999999999999999999999998765324 455557788889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (235)
T cd03261 212 DGKIVAEGTPEELR 225 (235)
T ss_pred CCeEEEecCHHHHc
Confidence 99999999987653
No 105
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=7.4e-38 Score=363.56 Aligned_cols=216 Identities=25% Similarity=0.387 Sum_probs=186.8
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788887763 2469999999999999999999999999999999999876 56899999998764
Q ss_pred h-hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 936 Q-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 936 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
. ...++.+|||+|++.+++.+||+||+.|....+.. ...+.++.+++++++++.++|.++.++.+ ..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 3 22346799999999999999999999997643211 12344556678999999999998888764 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|+|++||++. ++.+.+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999987 68899999999986 79999997
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 5
No 106
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=361.68 Aligned_cols=209 Identities=28% Similarity=0.390 Sum_probs=177.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
++|+|+|+.|++||+++|+|||||||||||++|+|+++|+ +|+|+++|+++....+ ++.++||+|++.+++.+||+
T Consensus 16 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~ 92 (353)
T PRK10851 16 QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVF 92 (353)
T ss_pred EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998865443 36799999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.|+.+........ ...+....++.+++.+||++..|.. +..|
T Consensus 93 eni~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~L 137 (353)
T PRK10851 93 DNIAFGLTVLPRRERP------------------------------NAAAIKAKVTQLLEMVQLAHLADRY-----PAQL 137 (353)
T ss_pred HHHHhhhhhcccccCC------------------------------CHHHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 9999986532100000 0001123467789999998776654 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ..+.+++.++|+..++..++|+|++|++|+++
T Consensus 138 SgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~ 216 (353)
T PRK10851 138 SGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHE-ELKFTSVFVTHDQEEAMEVADRVVVMSQGNIE 216 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999865 33445666889999999999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
+.|+++++.
T Consensus 217 ~~g~~~~i~ 225 (353)
T PRK10851 217 QAGTPDQVW 225 (353)
T ss_pred EEcCHHHHH
Confidence 999999874
No 107
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-38 Score=339.76 Aligned_cols=209 Identities=24% Similarity=0.417 Sum_probs=178.2
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+|+|+++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 5677877663 2469999999999999999999999999999999999876 468999999987653
Q ss_pred hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHH
Q 000913 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1226)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl 1016 (1226)
..++.++|++|++.+++.+||+||+.+....+. ....+.++.++++++.+++.+..+.. +..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHH
Confidence 345679999999988889999999988654432 23334456788999999998777665 357999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1017 ~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998877899999999986 47788999999986 6777654
No 108
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-37 Score=341.79 Aligned_cols=215 Identities=24% Similarity=0.362 Sum_probs=180.1
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++.. ...+.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc
Confidence 467777766411 011469999999999999999999999999999999999876 468999999987642
Q ss_pred hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHH
Q 000913 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1226)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl 1016 (1226)
.++.++|++|++.+++.+||+||+.+....+. ...+...+.++++++.++|.+..++.+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 35679999999988888999999988654332 233444567889999999987777653 57999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEec-CcEEEEeCCC
Q 000913 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1093 (1226)
Q Consensus 1017 ~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~-Gg~~~y~G~~ 1093 (1226)
+||++|+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..++.
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999864 5899999999986 47788999999985 4788887764
No 109
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.9e-38 Score=361.76 Aligned_cols=208 Identities=21% Similarity=0.308 Sum_probs=179.1
Q ss_pred cceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCC
Q 000913 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1226)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~ 236 (1226)
.+.+|+|+||.|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 345999999999999999999999999999999999999998 9999999999876543 468999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccc
Q 000913 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1226)
+++.+||+||+.|+.+..+... ++....+.++++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999999876543210 011234567889999987766554
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+..+ .+|+.++|+..++..++|+|+
T Consensus 128 -----~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~-~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 -----DELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQ-KTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEE
Confidence 46999999999999999999999999999999999999999999998765334 455568889999999999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000913 397 LLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1226)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 110
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-38 Score=329.24 Aligned_cols=205 Identities=27% Similarity=0.333 Sum_probs=177.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC----ccceEEEecCCC--CCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHD--NHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~----~~~~~~yv~Q~d--~~~~ 239 (1226)
++|+|||+++.+||.++|+|+||||||||.++|+|..+|+ +|+|+++|.+..... ..+.+-+|+||+ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999998 999999998765542 347899999996 5789
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
..||++.|.-+.+..+... ...++.++|+.+||+... -++
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~----l~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSF----LDR 137 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHH----Hhc
Confidence 9999999987665432211 112256789999998632 246
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
.+.+|||||||||+|||||+.+|++|++|||||+||++...+|++.|.++.+ ..+.+++.++|+..-+..+||||+||+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheeeee
Confidence 6778999999999999999999999999999999999999999999998865 556677779999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000913 400 DGQIVYQGPRELVLE 414 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1226)
+|++++.++.+++..
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998864
No 111
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.6e-38 Score=393.83 Aligned_cols=255 Identities=27% Similarity=0.430 Sum_probs=205.3
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.+.+...+||+.+++++.++ +++.... ...+..+++|+|+++.++.
T Consensus 295 ~~~~~~a~~ri~~~l~~~~~-----~~~~~~~--~~~~~~~I~f~~vsf~y~~--------------------------- 340 (567)
T COG1132 295 LQRASAAAERLFELLDEEPE-----VEDPPDP--LKDTIGSIEFENVSFSYPG--------------------------- 340 (567)
T ss_pred HHHHHHHHHHHHHHHcCCcc-----ccCCCCC--CCCCCCeEEEEEEEEEcCC---------------------------
Confidence 56788889999999988665 3332222 3445677999999999842
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
++++|+|+|+.++|||.+||+||||||||||+++|.|+++|+ +|+|.+||+++++... ++.++||+|+
T Consensus 341 ------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 341 ------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred ------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 234999999999999999999999999999999999999998 9999999999887764 5789999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+|. .||+|||.++.. ....+.+.++++.... ... +..|++++||
T Consensus 412 ~~LF~-~TI~~NI~~g~~----~at~eei~~a~k~a~~---------------------------~d~--I~~lp~g~dt 457 (567)
T COG1132 412 PLLFS-GTIRENIALGRP----DATDEEIEEALKLANA---------------------------HEF--IANLPDGYDT 457 (567)
T ss_pred ceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhCh---------------------------HHH--HHhCcccccc
Confidence 66665 899999999752 1223444444443211 111 3346888999
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.||+++. .||||||||++||||++.+|+||+||||||+||+.+...|.+.++++. .++|+++ +.|.. .+...+|+
T Consensus 458 ~vge~G~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRl-sti~~aD~ 532 (567)
T COG1132 458 IVGERGV-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRL-STIKNADR 532 (567)
T ss_pred eecCCCc-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccH-hHHHhCCE
Confidence 9997665 599999999999999999999999999999999999999999999765 3457776 55544 55555999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|++++.|++++++.
T Consensus 533 IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 533 IIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred EEEEECCEEEEecCHHHHHH
Confidence 99999999999999999875
No 112
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.7e-38 Score=393.59 Aligned_cols=255 Identities=23% Similarity=0.338 Sum_probs=196.2
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCC-CcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL-PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1226)
.+++....+|+.++++.+++. ........+. ...+|+|+||++.+..
T Consensus 314 ~~~~~~~~~ri~~~l~~~~~~------~~~~~~~~~~~~~~~i~~~~vsf~~~~-------------------------- 361 (588)
T PRK11174 314 KAQAVGAAESLVTFLETPLAH------PQQGEKELASNDPVTIEAEDLEILSPD-------------------------- 361 (588)
T ss_pred HHHHHHHHHHHHHHHcCCCcc------cCCCccccCCCCCceEEEEeeEEeccC--------------------------
Confidence 467788888988888765431 0000111111 1347999999986521
Q ss_pred hcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecC
Q 000913 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1226)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q 233 (1226)
.+++|+|+|++++||+.++|+||||||||||+++|+|++ |+ +|+|++||+++++... ++.++||+|
T Consensus 362 -------~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q 430 (588)
T PRK11174 362 -------GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQ 430 (588)
T ss_pred -------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecC
Confidence 124999999999999999999999999999999999999 87 9999999999887754 478999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000913 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1226)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1226)
++.+| +.||+|||.++.. ....+.+.++++... .+.. +-.|++..|
T Consensus 431 ~~~LF-~~TI~eNI~~g~~----~~~~eei~~al~~a~---------------------------l~~~--i~~lp~G~d 476 (588)
T PRK11174 431 NPQLP-HGTLRDNVLLGNP----DASDEQLQQALENAW---------------------------VSEF--LPLLPQGLD 476 (588)
T ss_pred CCcCC-CcCHHHHhhcCCC----CCCHHHHHHHHHHhC---------------------------HHHH--HHhcccccc
Confidence 77555 5799999998631 122233333322211 1111 234778889
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcC
Q 000913 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1226)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1226)
|.||+++. .||||||||++|||||+++|+||+||||||+||+.++..|.+.|+++. .++|+|++.|++ ++...||
T Consensus 477 T~vge~G~-~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiItHrl--~~i~~aD 551 (588)
T PRK11174 477 TPIGDQAA-GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMVTHQL--EDLAQWD 551 (588)
T ss_pred cccccCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEEecCh--HHHHhCC
Confidence 99998765 599999999999999999999999999999999999999999998764 456666654443 6678899
Q ss_pred cEEEEcCCeEEEecChhHHHH
Q 000913 394 DIILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1226)
+|++|++|++++.|+++++.+
T Consensus 552 ~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 552 QIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred EEEEEeCCeEeecCCHHHHHh
Confidence 999999999999999999864
No 113
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-37 Score=340.99 Aligned_cols=213 Identities=29% Similarity=0.380 Sum_probs=181.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ .+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 65 (220)
T cd03265 1 IEVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVV 65 (220)
T ss_pred CEEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecC
Confidence 35678877763 2469999999999999999999999999999999999866 46899999997653
Q ss_pred h--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
. ...++.++|++|++.+++.+||+|++.+....+. ...++.++.++++++.++|.+..++.+ ..||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 137 (220)
T cd03265 66 REPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMR 137 (220)
T ss_pred cChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHH
Confidence 2 2345679999999988899999999998754432 233344567889999999988777664 56999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+
T Consensus 138 qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 215 (220)
T cd03265 138 RRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGT 215 (220)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999876 899999999987 57788999999986 68888876
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 4
No 114
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7e-39 Score=324.00 Aligned_cols=205 Identities=26% Similarity=0.365 Sum_probs=183.1
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhh----hcceeeEeecCCCCCC
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 954 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~~ 954 (1226)
+++.++++||+.+++||++||+|||||||||.+.++.|... +.+|.|.+||.+++... .+..+||+||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 46789999999999999999999999999999999999877 56899999999876532 2345899999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000913 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1226)
Q Consensus 955 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEP 1034 (1226)
.+||+||++.....+.. +....+++++++++|+.+++.++++... ..||||||+|+.|||||+.+|+.|+||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999976666542 2334567777899999999999999873 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1035 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1035 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
++|+||.+-..|.++++.+.+.|.-|++|-|... |....|||.+++.+ |+++..|.+
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p 223 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSP 223 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCH
Confidence 9999999999999999999999999999999987 78999999999997 799999986
No 115
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-38 Score=340.98 Aligned_cols=207 Identities=29% Similarity=0.420 Sum_probs=180.1
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCC----CCCccceEEEecCCC-CCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMD----EFVPQRTAAYISQHD-NHIG 239 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1226)
..+|+|+|+.+++|+.++|+||||||||||+++|+|++.|+ +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 45999999999999999999999999999999999999998 999999999865 223468899999995 5677
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.-||.|.++|+....+... ++...+++.+++.+||.+.++.
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r----- 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDR----- 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccC-----
Confidence 8899999999987765421 1133567889999999988764
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
.+..|||||||||+||.+|+.+|++|+|||||+|||+..+.++++.++++.. .++.+||.++|+...+..++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999999876 444555668899999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000913 400 DGQIVYQGPRELVLE 414 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1226)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877654
No 116
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.4e-37 Score=363.02 Aligned_cols=214 Identities=22% Similarity=0.328 Sum_probs=188.1
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488999988874 2468999999999999999999999999999999999876 5689999999876
Q ss_pred Ch-hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
.. ...+|.+|||+|++.++|.+||+||+.|+...+ ..+..+.+++++++++.++|.++.++.+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 223577999999999999999999999975433 2344555677899999999999888874 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 999999999986 68899999999986 79999997
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 5
No 117
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-37 Score=361.80 Aligned_cols=205 Identities=24% Similarity=0.330 Sum_probs=177.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..+|+.+||+
T Consensus 33 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 109 (377)
T PRK11607 33 HAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVE 109 (377)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998865443 47899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.|+.+.++... .+....++.+++.+||.+..+.. +.+|
T Consensus 110 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~-----~~~L 150 (377)
T PRK11607 110 QNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRK-----PHQL 150 (377)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999875432110 01123467789999998766644 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.+..+ .++|.++|+..++..++|+|++|++|+++
T Consensus 151 SgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i~ 229 (377)
T PRK11607 151 SGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKFV 229 (377)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999988765444 55566788999999999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
..|+++++.
T Consensus 230 ~~g~~~~~~ 238 (377)
T PRK11607 230 QIGEPEEIY 238 (377)
T ss_pred EEcCHHHHH
Confidence 999999874
No 118
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-37 Score=344.21 Aligned_cols=215 Identities=26% Similarity=0.354 Sum_probs=180.1
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+|+|+++++|+++||+|||||||||||++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4677777663 2469999999999999999999999999999999999876 468999999987643
Q ss_pred h---h-hcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCC-------CCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000913 937 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPE-------VDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1226)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1226)
. . .++.++|++|++.+++.+||+|++.+....+.... ....+..+.++++++.+++.+..++. +
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----A 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----h
Confidence 1 2 23468999999999999999999988754332110 11234456788999999998777665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999878999999999987 57788999999986 6
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 88888864
No 119
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=360.75 Aligned_cols=217 Identities=22% Similarity=0.298 Sum_probs=185.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|++++++.. ..++.+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5788998887421 013579999999999999999999999999999999999876 56899999998764
Q ss_pred h------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
. ..+++.+||++|++.+++.+||+||+.+....+. .+.++.+++++++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 2 1235679999999999999999999998754432 234455567899999999988777663 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~ 1088 (1226)
|||||||+||++|+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999987 57788999999986 7999
Q ss_pred EeCCC
Q 000913 1089 YVGPL 1093 (1226)
Q Consensus 1089 y~G~~ 1093 (1226)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99975
No 120
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.5e-37 Score=338.90 Aligned_cols=210 Identities=26% Similarity=0.389 Sum_probs=177.9
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 5678877763 2469999999999999999999999999999999999876 468999999987643
Q ss_pred h-hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000913 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1226)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqr 1015 (1226)
. ..++.++|++|++.+++..|++||+.+....+. ...++.++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 1 223569999999988888999999988654321 233444567889999999988777664 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999764 899999999986 57788999999986 6888765
No 121
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.8e-38 Score=314.62 Aligned_cols=195 Identities=25% Similarity=0.347 Sum_probs=171.9
Q ss_pred ccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh-hhcceeeEeecCCCCCCCCCHHHHHHHH
Q 000913 887 VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYESLLFS 965 (1226)
Q Consensus 887 vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~ 965 (1226)
.++.|.+||++||+||||||||||||+|+|... +.+|.|+|||.+.... ...|-++.++|+..+|..+||.+|+-++
T Consensus 18 fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLG 95 (231)
T COG3840 18 FDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLG 95 (231)
T ss_pred EEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhccc
Confidence 567899999999999999999999999999887 5689999999886543 3556789999999999999999999886
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Q 000913 966 AWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1045 (1226)
Q Consensus 966 ~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~ 1045 (1226)
..-.+ ..+ .+.+++++.++..+||.++.+++. ..|||||||||++||+|+++-+||+||||+|.|||.-+..
T Consensus 96 l~P~L--kL~-a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~e 167 (231)
T COG3840 96 LSPGL--KLN-AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRAE 167 (231)
T ss_pred CCccc--ccC-HHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHH
Confidence 43222 122 344567899999999999999884 4699999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1046 VMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1046 i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
+..++.++++ ++.|++++||+|+ ++....|+++++++ |++.|.|+.
T Consensus 168 Ml~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 168 MLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 9999999975 5899999999998 79999999999997 799999985
No 122
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.1e-38 Score=312.79 Aligned_cols=201 Identities=24% Similarity=0.380 Sum_probs=173.6
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000913 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1226)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1226)
..++.|++||++||+||||||||||||+|+|+..|. +|+|.+||++.....| +|-++.++|+.++|..+||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 477899999999999999999999999999999998 9999999999887665 478999999999999999999999
Q ss_pred HHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhH
Q 000913 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1226)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1226)
++.. ++-+. ..+.+..++.++..+||..+.+.. +.+|||||
T Consensus 94 LGl~---P~LkL-------------------------------~a~~r~~v~~aa~~vGl~~~~~RL-----P~~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKL-------------------------------NAEQREKVEAAAAQVGLAGFLKRL-----PGELSGGQ 134 (231)
T ss_pred ccCC---ccccc-------------------------------CHHHHHHHHHHHHHhChhhHhhhC-----ccccCchH
Confidence 8753 21110 011223567788999999887755 45699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecC
Q 000913 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1226)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1226)
||||++||+|+++-+|++||||+|+||+.-+.+....+.+++.+.+.|+++ ++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999998866666666 5566689999999999999999999999
Q ss_pred hhHHH
Q 000913 409 RELVL 413 (1226)
Q Consensus 409 ~~~~~ 413 (1226)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88764
No 123
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-37 Score=361.43 Aligned_cols=205 Identities=26% Similarity=0.387 Sum_probs=175.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||+
T Consensus 17 ~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~ 93 (369)
T PRK11000 17 VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVA 93 (369)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999998765433 36799999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.|+.+..+... .+....++.+++.+||++..+..+ ..|
T Consensus 94 eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~L 134 (369)
T PRK11000 94 ENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KAL 134 (369)
T ss_pred HHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hhC
Confidence 99999865432110 011224567899999987776554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 135 SgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~ 213 (369)
T PRK11000 135 SGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVA 213 (369)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 445556788889999999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
..|+++++.
T Consensus 214 ~~g~~~~i~ 222 (369)
T PRK11000 214 QVGKPLELY 222 (369)
T ss_pred EEcCHHHHH
Confidence 999998874
No 124
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.5e-37 Score=339.96 Aligned_cols=215 Identities=27% Similarity=0.409 Sum_probs=180.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++... ....+|+|+|+++++|++++|+|+|||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~~---------~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDVK---------KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCCC---------ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 56788887764210 11269999999999999999999999999999999999876 46899999998764
Q ss_pred h--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
. ..+++.++|++|++.+++.+||+||+.+....+. ....+..+.++++++.+++.+..++.+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 2345679999999988888999999988654331 234455667899999999988777663 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999986 6777654
No 125
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2e-37 Score=354.64 Aligned_cols=212 Identities=23% Similarity=0.364 Sum_probs=184.9
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|++++++ ++.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67788887763 3569999999999999999999999999999999999876 56899999998764
Q ss_pred h--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
. ...++.+||++|++.+++.+||.|++.|.+.++. .+.++..++++++++.++|.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998775542 233444567899999999998888774 56999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|||+||+||+++|++|||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999865 799999999987 68889999999986 799999985
No 126
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2e-37 Score=342.45 Aligned_cols=212 Identities=26% Similarity=0.366 Sum_probs=180.1
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ .+.+|+|+||++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 5677877763 2469999999999999999999999999999999999876 468999999987532
Q ss_pred ---hh-hcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000913 937 ---ET-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1226)
Q Consensus 937 ---~~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGq 1012 (1226)
.. .++.++|++|++.+++.+||+||+.+....+. ....+..+.++++++.+++.+..+.. +..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHH
Confidence 12 23468999999999999999999988643322 22334456688999999998777665 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877999999999987 58889999999986 78888887
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 4
No 127
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-37 Score=342.81 Aligned_cols=216 Identities=27% Similarity=0.392 Sum_probs=181.1
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ .+.+|+|||+++++|++++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 67888888774 2469999999999999999999999999999999999876 46899999998754
Q ss_pred hh-hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 936 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
.. ..++.++|++|++.+++.+||+||+.+....+.. ......+..+.++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 32 2245699999999888889999999886543211 00122334456888999999987777653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999765 899999999986 47788999999986 78998887
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 4
No 128
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=362.65 Aligned_cols=214 Identities=25% Similarity=0.374 Sum_probs=185.6
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.+. ++.+|+|+|+++++|++++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 377888888763 2469999999999999999999999999999999999876 5689999999876
Q ss_pred Ch-hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
.. ...++.+|||+|+..+++.+||+||+.|....+. .+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 43 1234679999999999999999999998764432 234455677899999999988877764 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||++||+++ ++.+.+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999986 58889999999986 79999997
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 5
No 129
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.7e-37 Score=363.98 Aligned_cols=218 Identities=26% Similarity=0.362 Sum_probs=185.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+||.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 377888888763 3579999999999999999999999999999999999876 5689999999876
Q ss_pred Ch---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ..+++.+|||+|++.+++.+||+|++.++...+... ....+..+++++++++.+++.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 345678999999999888999999998864321100 1012334567899999999998888764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
|||||+.|||+|+++|+||||||||+|||+.++..++++|++++++|+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999987 58899999999986 789999
Q ss_pred CCCC
Q 000913 1091 GPLG 1094 (1226)
Q Consensus 1091 G~~~ 1094 (1226)
|+..
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9853
No 130
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-38 Score=328.71 Aligned_cols=217 Identities=26% Similarity=0.347 Sum_probs=180.5
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++.+|++..++.... ...+|+||||++.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~~---------~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGKF---------AFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCcc---------hhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 3677888877753221 1259999999999999999999999999999999999877 5689999999765
Q ss_pred Chh----hhcceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCC
Q 000913 935 KQE----TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSG 1007 (1226)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~ 1007 (1226)
... .+.+.+.+|+||+. +.|..||++.|.=.... ...++. ++++.++++.+||.+ +.++. +..
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~--~~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKS--QQRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHH--HHHHHHHHHHcCCCHHHHhcC-----chh
Confidence 442 46788999999985 67889999988754332 122332 333899999999975 34444 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1008 LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
||||||||++|||||+.+|++|+||||||+||+..++.|+++|.++.++ |.|+|+++||.+. +...|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999754 7899999999874 7889999999997 79
Q ss_pred EEEeCCCC
Q 000913 1087 EIYVGPLG 1094 (1226)
Q Consensus 1087 ~~y~G~~~ 1094 (1226)
++..+|..
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999863
No 131
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=323.66 Aligned_cols=206 Identities=24% Similarity=0.403 Sum_probs=172.0
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIGE 240 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~~~~ 240 (1226)
.++|+|||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.+++...+. .-++||||....|+.
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 56999999999999999999999999999999999999987 99999999999887663 569999999999999
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcC-Cccccccccccc
Q 000913 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDE 319 (1226)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 319 (1226)
|||+|||..++...... . . ...+ .+.+.+.|= |.+..+..-|
T Consensus 93 LTVeENL~~g~~~~~~~-~----------~------~~~~------------------~e~v~~lFP~Lker~~~~aG-- 135 (237)
T COG0410 93 LTVEENLLLGAYARRDK-E----------A------QERD------------------LEEVYELFPRLKERRNQRAG-- 135 (237)
T ss_pred CcHHHHHhhhhhccccc-c----------c------cccc------------------HHHHHHHChhHHHHhcCccc--
Confidence 99999999876432110 0 0 0000 222333332 3333444444
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
.|||||+|-++|||||+.+|++|+|||||.||-|.-..+|++.++++.+. .+.+|+.+.|....+.+++|+.++|.
T Consensus 136 ---~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 136 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ---CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEEEe
Confidence 59999999999999999999999999999999999999999999998753 44677779999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000913 400 DGQIVYQGPRELVLE 414 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1226)
.|+|++.|+.+++.+
T Consensus 212 ~Griv~~G~~~eL~~ 226 (237)
T COG0410 212 NGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998853
No 132
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.7e-37 Score=359.71 Aligned_cols=203 Identities=25% Similarity=0.296 Sum_probs=179.1
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhh----cceeeEeecCCC
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETF----ARISGYCEQNDI 951 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~----~~~~gyv~Q~~~ 951 (1226)
+.+.+|+|+||+|++||+++|+|||||||||||++|+|... +.+|+|.++|.++.. ..+ ++.+|||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34579999999999999999999999999999999999877 568999999987653 222 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000913 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1226)
Q Consensus 952 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~L 1031 (1226)
+++.+||+||+.|...+. ..+.++.++++.++++.++|.+..++.+ ..|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999976543 2345566778999999999988887764 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1032 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1032 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
||||++||+.++..+++.++++.++ |+|||++||++. ++.+.+|++++|++ |+++..|+.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 9999999999999999999998754 899999999986 57889999999985 799999975
No 133
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2e-37 Score=336.57 Aligned_cols=206 Identities=30% Similarity=0.397 Sum_probs=175.7
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+|+||++++|++++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 5677777663 2469999999999999999999999999999999999876 568999999987643
Q ss_pred -hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000913 937 -ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1226)
Q Consensus 937 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqr 1015 (1226)
...++.++||+|++.+++.+||+||+.+....+. . .+++++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2345679999999988889999999988654321 1 1345788999999988777653 5699999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998877999999999987 47778999999986 6887664
No 134
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-37 Score=360.10 Aligned_cols=214 Identities=24% Similarity=0.363 Sum_probs=187.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488999988763 2468999999999999999999999999999999999876 5689999999876
Q ss_pred Ch-hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
.. ...+|.+|||+|++.++|.+||.||+.|+...+ ..+..+.++++.++++.++|.++.++. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 234678999999999999999999999975433 234556667899999999999888876 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+ .|.|+|++|||+. +++.++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999987 68899999999986 79999998
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
+
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 5
No 135
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-37 Score=356.77 Aligned_cols=206 Identities=27% Similarity=0.374 Sum_probs=175.5
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1226)
+++|+|+||.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 45999999999999999999999999999999999999998 9999999998765432 35799999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+.+||+||+.|+....+... .+....++.+++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998765432110 001124567889999987776554
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
+.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.+.. +++||.++|+..++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999986533 445566788889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998774
No 136
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.1e-36 Score=374.17 Aligned_cols=217 Identities=29% Similarity=0.437 Sum_probs=181.3
Q ss_pred cCCCCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEE
Q 000913 849 LPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIT 928 (1226)
Q Consensus 849 ~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~ 928 (1226)
.|.-...++|+||+|.|+.. ...+|+|+|++|+|||.+||+|+||||||||+|+|+|+.. +..|+|.
T Consensus 465 ~~~~~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 34445689999999999742 2369999999999999999999999999999999999987 5689999
Q ss_pred EcCccCC---hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------ccc
Q 000913 929 ISGYPKK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQS 998 (1226)
Q Consensus 929 i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~ 998 (1226)
+||+++. ...+|+.+|||+|++.++. -|++||+.++. ++.+.+ .+.++++..|..+. .++
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDE----EIIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHH----HHHHHHHHhCcHHHHHhccccccc
Confidence 9999864 4568899999999998775 59999998752 233322 34555555554433 344
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeE
Q 000913 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1078 (1226)
Q Consensus 999 ~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v 1078 (1226)
.+|.. ..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.+.. +|+|+|+++|+++ ..+.+|++
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 55554 46899999999999999999999999999999999999999999999985 5899999999986 68899999
Q ss_pred EEEecCcEEEEeCCC
Q 000913 1079 FLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1079 ~ll~~Gg~~~y~G~~ 1093 (1226)
++|++ |+++..|+.
T Consensus 678 iVl~~-Gkiv~~gs~ 691 (709)
T COG2274 678 IVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEccC-CceeccCCH
Confidence 99985 799999984
No 137
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.3e-37 Score=340.69 Aligned_cols=213 Identities=23% Similarity=0.282 Sum_probs=177.6
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCC-----CCceEEEEEEEcC
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGNITISG 931 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~-----~~~~~~G~i~i~g 931 (1226)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|.. . +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 5677777653 236999999999999999999999999999999999986 4 5689999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.+... ..+++.++|++|++.++ .+||+||+.+....+.. ....+.+++++++++.+++.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 23456799999998877 79999999886543321 1222345668899999999876655421 25
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|+++ ++.+.+|++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999999877 99999999987 47788999999986 68
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 9988875
No 138
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.1e-37 Score=338.92 Aligned_cols=208 Identities=28% Similarity=0.408 Sum_probs=173.4
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++... ..+.+|+|+||++++|++++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~~---------~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGGG---------EKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCCC---------cceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehh
Confidence 35678887764210 01469999999999999999999999999999999999876 56899999998754
Q ss_pred hh------h-hcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000913 936 QE------T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1226)
Q Consensus 936 ~~------~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~L 1008 (1226)
.. . .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.++|.+..++.+ ..|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SEL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhc
Confidence 21 1 24579999999999999999999998764432 223344567889999999988776653 579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
|||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++. + +.+|++++|++|
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~G 216 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRDG 216 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeCC
Confidence 99999999999999999999999999999999999999999999976 58999999999863 5 489999999874
No 139
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-37 Score=341.09 Aligned_cols=217 Identities=24% Similarity=0.314 Sum_probs=181.9
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++.. .+.+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5678888776411 001269999999999999999999999999999999999876 46899999998764
Q ss_pred hh------hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCC
Confidence 21 235679999999999999999999988654332 23344456788999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~ 1088 (1226)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 47788999999986 7899
Q ss_pred EeCCC
Q 000913 1089 YVGPL 1093 (1226)
Q Consensus 1089 y~G~~ 1093 (1226)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88864
No 140
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.4e-37 Score=338.14 Aligned_cols=221 Identities=35% Similarity=0.603 Sum_probs=182.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC-CceEEEEEEEcCccC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYITGNITISGYPK 934 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~~~~~G~i~i~g~~~ 934 (1226)
+.|+|+++.++... ..+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNWN---------KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecCc---------cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 45788888874210 13579999999999999999999999999999999999864 124689999999877
Q ss_pred ChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHH-HHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDE-VMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
....+++.++|++|++.+++.+||+||+.|.+................+++ .++.+++.++.++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 554566789999999999999999999998765433221122223334555 89999998777665 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998877999999999985468899999999986 6888765
No 141
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-37 Score=343.44 Aligned_cols=216 Identities=26% Similarity=0.309 Sum_probs=178.0
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++. ++.+|+|+|+++++|++++|+||||||||||+++|+|... +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYPN------------GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecCC------------ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 46777776531 1469999999999999999999999999999999999875 468999999987542
Q ss_pred ------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000913 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLR-----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1226)
Q Consensus 937 ------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr-----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1226)
...++.++|++|++.+++.+||+||+.+..... ...........+.+.++++.++|.+..+.. +
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----A 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----c
Confidence 234567999999998888999999998753210 000111123345688899999998776665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999987 47779999999986
Q ss_pred cEEEEeCCC
Q 000913 1085 GQEIYVGPL 1093 (1226)
Q Consensus 1085 g~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 789998875
No 142
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.8e-38 Score=325.23 Aligned_cols=202 Identities=24% Similarity=0.388 Sum_probs=186.8
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhhhcceeeEeecCCCCCCCCCH
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 958 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 958 (1226)
+++.+++|+||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+.++.. +.++||.|.+.-+++.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhhh-hhhcccChhhhccCccCcH
Confidence 56789999999999999999999999999999999999987 57899999999987644 4568999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000913 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1226)
Q Consensus 959 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1226)
.|.|.|-|.|+. ++.++.+..++..|+.+++....... ++.||-|++|++.+-.+++++|++++||||+|||
T Consensus 90 ~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 999999999874 56778888899999999999988877 4679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
||.+.+.+.+.+.++.+.|.|||+++|+++ .+.++||++++|++ |+.|..|+.
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 999999999999999999999999999997 68999999999986 799999985
No 143
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.2e-37 Score=355.50 Aligned_cols=205 Identities=27% Similarity=0.392 Sum_probs=175.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1226)
.+|+||||+|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+||
T Consensus 55 ~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 131 (340)
T PRK13536 55 AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTV 131 (340)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 24679999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+||+.|.....+... .+....++.+++.+||++..++.++ +
T Consensus 132 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~-----~ 172 (340)
T PRK13536 132 RENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS-----D 172 (340)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----h
Confidence 999997654432110 0011234567889999988887765 5
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.. . +++|+.++|+..++.++||+|++|++|++
T Consensus 173 LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~i 250 (340)
T PRK13536 173 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGRK 250 (340)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999864 3 44556678899999999999999999999
Q ss_pred EEecChhHHHH
Q 000913 404 VYQGPRELVLE 414 (1226)
Q Consensus 404 v~~G~~~~~~~ 414 (1226)
+++|+.+++..
T Consensus 251 ~~~g~~~~l~~ 261 (340)
T PRK13536 251 IAEGRPHALID 261 (340)
T ss_pred EEEcCHHHHHh
Confidence 99999998864
No 144
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.4e-37 Score=340.61 Aligned_cols=214 Identities=22% Similarity=0.334 Sum_probs=181.7
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+|+++++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56788887763 2469999999999999999999999999999999999876 56899999998764
Q ss_pred h-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 936 Q-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
. ...++.++|++|++.+++.+||+|++.+...... .....+.++.+.++++.++|.+..+.. +..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 2345679999999988889999999987642111 123444556788999999998777765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999987 47788999999986 789999
Q ss_pred CCC
Q 000913 1091 GPL 1093 (1226)
Q Consensus 1091 G~~ 1093 (1226)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 145
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.9e-37 Score=335.93 Aligned_cols=191 Identities=28% Similarity=0.385 Sum_probs=163.7
Q ss_pred eEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhhhcceeeEeecCCC-CCCCCCHH
Q 000913 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDI-HSPFVTIY 959 (1226)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 959 (1226)
+.+|+|+||++++|++++|+|||||||||||++|+|... +.+|+|.++|.+......++.+||++|++. .+..+||+
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999876 568999999987654445567999999974 33467999
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000913 960 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1039 (1226)
Q Consensus 960 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD 1039 (1226)
||+.+..... . . ..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~--~---~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL--D---A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc--C---c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 1 1245789999999988877764 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1040 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1040 ~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i 204 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAI 204 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999777999999999986 47778999999986 554
No 146
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.1e-37 Score=336.58 Aligned_cols=206 Identities=25% Similarity=0.344 Sum_probs=174.7
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ +++.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 56788887763 12469999999999999999999999999999999999876 46899999998764
Q ss_pred h------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
. ..+++.++|++|++.+++.+||+||+.+....+. ......++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1245679999999988889999999998754331 223344567889999999987666653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 577789999999864
No 147
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-37 Score=334.87 Aligned_cols=199 Identities=29% Similarity=0.442 Sum_probs=166.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
++|+|+||.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 14 RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998754332 35799999998889999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.++....+... .+....++.+++.+||++..++.+ ..|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03259 91 ENIAFGLKLRGVPK----------------------------------AEIRARVRELLELVGLEGLLNRYP-----HEL 131 (213)
T ss_pred HHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 99988653221100 001123466788999987666554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+..++.+++|+|++|++|+++
T Consensus 132 SgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~ 210 (213)
T cd03259 132 SGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVMNEGRIV 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 445556788888999999999999999998
Q ss_pred Eec
Q 000913 405 YQG 407 (1226)
Q Consensus 405 ~~G 407 (1226)
+.|
T Consensus 211 ~~g 213 (213)
T cd03259 211 QVG 213 (213)
T ss_pred ecC
Confidence 765
No 148
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-37 Score=349.25 Aligned_cols=218 Identities=22% Similarity=0.307 Sum_probs=181.8
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++... ...+.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 67889988874210 012469999999999999999999999999999999999876 56899999998764
Q ss_pred h-----hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC--cccccccCCCCCCC
Q 000913 936 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN--PLRQSLVGLPGVSG 1007 (1226)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~~g~~~~~~ 1007 (1226)
. ...++.+|||+|++. .+...||+|++.|..... ..+.++..++++++++.++|. +..++. +..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 234578999999963 333579999999865432 234556667789999999996 555655 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1008 LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 999999999986 47788999999986 79
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999874
No 149
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-37 Score=347.09 Aligned_cols=218 Identities=27% Similarity=0.397 Sum_probs=177.0
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-----ccceEEEecCCCC-CC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDN-HI 238 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1226)
+++|+|||++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 35999999999999999999999999999999999999998 999999999886532 2467999999853 44
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc--ccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD--VCADTMV 316 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1226)
..+||+||+.|+....+.. .++....++++++.+||+ +..|+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~-- 140 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKDK-- 140 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhccC--
Confidence 5689999999875432210 011123456789999996 44454
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
.++.|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+. .+++|+.++|+..++..++|+|+
T Consensus 141 ---~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 141 ---SPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ---CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 44579999999999999999999999999999999999999999999998653 34556667888899999999999
Q ss_pred EEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000913 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~ 425 (1226)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23345655544
No 150
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7e-37 Score=341.88 Aligned_cols=214 Identities=26% Similarity=0.359 Sum_probs=181.2
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+||++++|++++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67888887763 2469999999999999999999999999999999999876 46899999997653
Q ss_pred h-----------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 000913 936 Q-----------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1226)
Q Consensus 936 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 1004 (1226)
. ...++.++|++|++.+++..||+||+.+...... ....++..+.++++++.++|.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 2245679999999988888999999987543211 123344556788999999998776665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1005 ~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999999877999999999986 47788999999986
Q ss_pred cEEEEeCCC
Q 000913 1085 GQEIYVGPL 1093 (1226)
Q Consensus 1085 g~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 789988874
No 151
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.5e-36 Score=344.44 Aligned_cols=205 Identities=20% Similarity=0.222 Sum_probs=153.0
Q ss_pred CCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000913 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1226)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1226)
.|..+.+.+|.+.++.. .-+++.+++..++.-...+++|+||+||||+++++.|... +..|-+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 34467888888776521 1168999999999999999999999999999999999655 4567776654
Q ss_pred ccCChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 932 YPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 932 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
++.++|..|...-+-.+.|.+ +.+-...+ +.... +.+++-+..+||..-.- -. .+.+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~--pG~~~----ee~r~hl~~~Gl~g~la---~~-si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNA-VDFMEKSF--PGKTE----EEIRRHLGSFGLSGELA---LQ-SIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHH-HHHHHHhC--CCCCH----HHHHHHHHhcCCCchhh---hc-cccccCCc
Confidence 345889999765444444433 22222222 22222 23566788888864221 11 15689999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
||-||++|.....+|.+|+|||||+.||..+-..+-+.|++. +..||++||+-++ +-..|+++.+.++|...-+.|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999875 4589999999764 777999999999765444555
Q ss_pred C
Q 000913 1092 P 1092 (1226)
Q Consensus 1092 ~ 1092 (1226)
.
T Consensus 563 ~ 563 (582)
T KOG0062|consen 563 G 563 (582)
T ss_pred c
Confidence 4
No 152
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.7e-37 Score=335.16 Aligned_cols=205 Identities=25% Similarity=0.367 Sum_probs=173.8
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ +.+.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4677777763 12469999999999999999999999999999999999866 468999999986532
Q ss_pred ------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 937 ------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
..+++.++|++|++.+++.+|++||+.+....+. ...++.++.++++++.+++.+..+..+ ..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1245679999999999999999999998654332 233444567889999999987776653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|++++|++|
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999777999999999986 477789999999864
No 153
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-37 Score=337.07 Aligned_cols=217 Identities=24% Similarity=0.325 Sum_probs=180.3
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++... ..+.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~~---------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEGS---------VQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCCC---------cceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 378899998874210 11469999999999999999999999999999999999876 5689999999876
Q ss_pred Chh------hh-cceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000913 935 KQE------TF-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1226)
Q Consensus 935 ~~~------~~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1226)
... .+ ++.++|++|++.+++.+|++||+.+....+ ....++.+++++++++.++|.+..++. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 431 12 256999999998888899999999865432 123344456788999999998777665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1008 LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
||||||||++||++|+.+|+||||||||+|||+.++..+++.|+++.+ +|+|||+++|+++. + +.+|++++|.+ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~-~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL-A-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 58999999999863 4 44689999985 78
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
++..|++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9988875
No 154
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-37 Score=334.44 Aligned_cols=204 Identities=29% Similarity=0.390 Sum_probs=171.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 14 EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcH
Confidence 4999999999999999999999999999999999999998 999999998764321 23579999999989999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+||+.+.....+... .+....++.+++.+||++..++.+ ..
T Consensus 91 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 131 (220)
T cd03265 91 WENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLV-----KT 131 (220)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh-----hh
Confidence 999998754322100 001123567889999987766655 46
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++.+++|+|++|++|++
T Consensus 132 LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i 210 (220)
T cd03265 132 YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKE-EFGMTILLTTHYMEEAEQLCDRVAIIDHGRI 210 (220)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999998765 3244566678888999999999999999999
Q ss_pred EEecChhHH
Q 000913 404 VYQGPRELV 412 (1226)
Q Consensus 404 v~~G~~~~~ 412 (1226)
++.|+++++
T Consensus 211 ~~~~~~~~~ 219 (220)
T cd03265 211 IAEGTPEEL 219 (220)
T ss_pred EEeCChHHc
Confidence 999987653
No 155
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-36 Score=337.75 Aligned_cols=209 Identities=30% Similarity=0.401 Sum_probs=171.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+||+
T Consensus 16 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 92 (239)
T cd03296 16 VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVF 92 (239)
T ss_pred EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHH
Confidence 4999999999999999999999999999999999999988 9999999988754332 35799999998888899999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.|+....+...+.. ..+....++.+++.+||++..++.+ ..|
T Consensus 93 e~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 137 (239)
T cd03296 93 DNVAFGLRVKPRSERPP------------------------------EAEIRAKVHELLKLVQLDWLADRYP-----AQL 137 (239)
T ss_pred HHHhhhhhhccccccCC------------------------------HHHHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 99998754321100000 0001123567788999987666554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++...+. +||.++|+..++.+++|+|++|++|+++
T Consensus 138 S~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~-tvii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (239)
T cd03296 138 SGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHV-TTVFVTHDQEEALEVADRVVVMNKGRIE 216 (239)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhCCEEEEEECCeEE
Confidence 999999999999999999999999999999999999999999988653344 4555777888899999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
+.|+++++.
T Consensus 217 ~~~~~~~~~ 225 (239)
T cd03296 217 QVGTPDEVY 225 (239)
T ss_pred EecCHHHHh
Confidence 999988763
No 156
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.5e-37 Score=336.08 Aligned_cols=214 Identities=25% Similarity=0.391 Sum_probs=180.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++. +.+.+|+|+|+++++|+++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 356778777631 11469999999999999999999999999999999999876 56899999998764
Q ss_pred h--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
. ..+++.++|++|++.+++.+||+||+.+....+. ...++..+.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 3 2345679999999988889999999988654432 233344556889999999987776653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999875 699999999987 47788999999986 688888864
No 157
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-37 Score=340.12 Aligned_cols=213 Identities=27% Similarity=0.374 Sum_probs=179.7
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++. .+.+|+|+|++|++|++++|+|||||||||||++|+|... +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 46777777631 1459999999999999999999999999999999999876 468999999987532
Q ss_pred ---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCHH
Q 000913 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~LSgG 1011 (1226)
..+++.++|++|++.+++.+||+||+.+...++. .+..+..+.+.++++.+++.+ ..+.. +..||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 2345679999999999989999999988654331 233444567889999999985 55554 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
|||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999764 899999999986 57788999999986 788888
Q ss_pred CCC
Q 000913 1091 GPL 1093 (1226)
Q Consensus 1091 G~~ 1093 (1226)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 874
No 158
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.7e-37 Score=351.23 Aligned_cols=206 Identities=28% Similarity=0.395 Sum_probs=176.3
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1226)
+++|+||||.|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999998875421 2357999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+||+.|.+++.+... .+....++.+++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998765443110 0011235678999999887776654
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++.+ . +++|+.++|+..++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998764 3 4455667888999999999999999999
Q ss_pred EEEecChhHHHH
Q 000913 403 IVYQGPRELVLE 414 (1226)
Q Consensus 403 iv~~G~~~~~~~ 414 (1226)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988754
No 159
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-37 Score=345.25 Aligned_cols=215 Identities=24% Similarity=0.328 Sum_probs=181.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++. .+.+|+|||+++++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 3778999887741 2359999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ...++.+||++|++. .++..||.||+.|..... ..+.++.++.+.++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 234567999999963 345689999999864322 2344445567889999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 47789999999986 789999
Q ss_pred CCC
Q 000913 1091 GPL 1093 (1226)
Q Consensus 1091 G~~ 1093 (1226)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 875
No 160
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.2e-37 Score=342.23 Aligned_cols=217 Identities=24% Similarity=0.274 Sum_probs=178.1
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++. ++.+|+|+|+++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~------------~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYPN------------GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecCC------------CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 457788776530 2459999999999999999999999999999999999876 46899999998753
Q ss_pred h------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 000913 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLR-----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1226)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr-----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 1004 (1226)
. ..+++.++|++|++.+++.+||+||+.+..... ........+.++++.++++.+++.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 124567999999998888999999998742110 000011233456688999999998776665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1005 ~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ .+.+.||++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 3579999999999999999999999999999999999999999999998754 899999999987 47788999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 688888875
No 161
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-37 Score=345.36 Aligned_cols=203 Identities=25% Similarity=0.306 Sum_probs=173.8
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh---h----hcceeeEeecCCC
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDI 951 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 951 (1226)
+.+.+|+|+|+++++|++++|+||||||||||+++|+|... +.+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 45679999999999999999999999999999999999876 4689999999875421 1 1356999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000913 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1226)
Q Consensus 952 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~L 1031 (1226)
+++.+||+||+.+...... ....+..+.++++++.++|.+..++.+ ..|||||||||+||++|+.+|+||||
T Consensus 113 ~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8889999999988654321 223444567889999999988777764 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1032 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1032 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999986 47788999999986 789888874
No 162
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=5.5e-37 Score=336.55 Aligned_cols=211 Identities=28% Similarity=0.422 Sum_probs=175.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+||++++|+++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 65 (222)
T cd03224 1 LEVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDIT 65 (222)
T ss_pred CEEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcC
Confidence 35677776653 2469999999999999999999999999999999999876 46899999998754
Q ss_pred hh---h-hcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCCH
Q 000913 936 QE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 936 ~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. . .++.++|++|++.+++.+|++||+.+....+. ..+.++.+.++++.+ ++.+..++. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 135 (222)
T cd03224 66 GLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSG 135 (222)
T ss_pred CCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCH
Confidence 21 1 24569999999999999999999988654321 122344567788887 466655554 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 136 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (222)
T cd03224 136 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLE 213 (222)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEe
Confidence 9999999999999999999999999999999999999999999877899999999986 47888999999986 788888
Q ss_pred CCC
Q 000913 1091 GPL 1093 (1226)
Q Consensus 1091 G~~ 1093 (1226)
|+.
T Consensus 214 ~~~ 216 (222)
T cd03224 214 GTA 216 (222)
T ss_pred CCH
Confidence 864
No 163
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.4e-36 Score=348.10 Aligned_cols=205 Identities=28% Similarity=0.405 Sum_probs=173.3
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1226)
++|+||||++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 18 ~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 94 (303)
T TIGR01288 18 VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTV 94 (303)
T ss_pred EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcH
Confidence 4999999999999999999999999999999999999998 999999998864322 24679999999888999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+||+.+.....+... .+....++.+++.+||++..++.++ .
T Consensus 95 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~-----~ 135 (303)
T TIGR01288 95 RENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA-----L 135 (303)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh-----h
Confidence 999987543322100 0011234567889999887777654 5
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|++++. . +++|+.++|+..++.++||+|++|++|++
T Consensus 136 LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~i 213 (303)
T TIGR01288 136 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGRK 213 (303)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999864 3 44566678888999999999999999999
Q ss_pred EEecChhHHHH
Q 000913 404 VYQGPRELVLE 414 (1226)
Q Consensus 404 v~~G~~~~~~~ 414 (1226)
++.|+++++..
T Consensus 214 ~~~g~~~~~~~ 224 (303)
T TIGR01288 214 IAEGRPHALID 224 (303)
T ss_pred EEEcCHHHHHh
Confidence 99999988754
No 164
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.2e-36 Score=343.11 Aligned_cols=215 Identities=19% Similarity=0.290 Sum_probs=181.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+||||++++|++++|+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 478899988763 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Chh------hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000913 935 KQE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1226)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~L 1008 (1226)
... ..++.++|++|++.+++.+||.||+.+...... ..+....++.+.++++.++|.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 234569999999988888999999988543211 1233344556788999999988777663 579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
|||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 47788999999986 799
Q ss_pred EEeCCC
Q 000913 1088 IYVGPL 1093 (1226)
Q Consensus 1088 ~y~G~~ 1093 (1226)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999874
No 165
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=340.00 Aligned_cols=212 Identities=27% Similarity=0.368 Sum_probs=179.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+|+++++|++++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56788877663 2469999999999999999999999999999999999876 46899999998764
Q ss_pred hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000913 936 QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1226)
Q Consensus 936 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqr 1015 (1226)
. ..+.+||++|++.+++.+||+||+.+....+. ....+..+.+.++++.++|.+..+.. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 23458999999988888999999988644321 23344456788999999998776665 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEec-CcEEEEeCCC
Q 000913 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1093 (1226)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~-Gg~~~y~G~~ 1093 (1226)
|+||++|+.+|++|||||||+|||+.++..+++.|+++++ +|+|||+++|++. ++.+.+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999987 57889999999985 5888888764
No 166
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-37 Score=347.44 Aligned_cols=218 Identities=26% Similarity=0.300 Sum_probs=180.9
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++.... ..+.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~~--------~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKTP--------FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCCc--------ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 678999988852110 11359999999999999999999999999999999999876 46899999998763
Q ss_pred h-------hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000913 936 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1226)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1226)
. ..+++.+|||+|++. .+...||+||+.|+.... ..+.++.+++++++++.++|. +..+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 235567999999863 233479999999875332 234445556789999999996 556655 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
.|||||||||+||++|+.+|++|||||||+|||+.++..++++|++++++ |.|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999764 999999999987 57889999999985 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999974
No 167
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=345.69 Aligned_cols=218 Identities=24% Similarity=0.351 Sum_probs=175.2
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-------CccceEEEecCCC-C
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHD-N 236 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~-------~~~~~~~yv~Q~d-~ 236 (1226)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 34999999999999999999999999999999999999998 99999999987531 1235799999985 2
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000913 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1226)
.+...||+||+.|+....+... .+....++.+++.+||+ ...++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 4446799999998754322110 01112456788999996 445544
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 -----PFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 4569999999999999999999999999999999999999999999988653 3455666788889999999999
Q ss_pred EEEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000913 396 ILLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~ 425 (1226)
++|++|++++.|+++++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999887642 33444554443
No 168
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=331.70 Aligned_cols=208 Identities=32% Similarity=0.477 Sum_probs=175.8
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+|+||++++| +++|+||||||||||+++|+|... +.+|+|.++|.++..
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 5677777663 246999999999999 999999999999999999999876 468999999987543
Q ss_pred --hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
...++.++|++|++.+++.+||.||+.+....+. ...++.++.++++++.+++.+..+..+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 2345679999999999899999999988655432 223334566889999999987777653 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999976 599999999986 46778999999986 6777654
No 169
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4.4e-37 Score=390.83 Aligned_cols=253 Identities=24% Similarity=0.328 Sum_probs=195.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.++....++|+.++++.++|. .. +....+.....|+|+||++.++.
T Consensus 418 ~~~~~~~~~ri~~~l~~~~e~-----~~--~~~~~~~~~~~I~~~nvsf~Y~~--------------------------- 463 (686)
T TIGR03797 418 ILAVIPLWERAKPILEALPEV-----DE--AKTDPGKLSGAIEVDRVTFRYRP--------------------------- 463 (686)
T ss_pred HHHHHHHHHHHHHHhcCCccc-----cc--CcCCCCCCCceEEEEEEEEEcCC---------------------------
Confidence 567788888888887765541 00 00001112347999999999842
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
..+++|+|+|++|+||+.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++..+ ++.++||+|+
T Consensus 464 -----~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 535 (686)
T TIGR03797 464 -----DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQN 535 (686)
T ss_pred -----CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccC
Confidence 1134999999999999999999999999999999999999998 9999999999987764 4789999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+| +.|++|||.++.. ...+.+.++++. .++ +.. ...|++..||
T Consensus 536 ~~lf-~gTI~eNi~~~~~-----~~~e~i~~al~~---a~l------------------------~~~--i~~lp~G~dt 580 (686)
T TIGR03797 536 GRLM-SGSIFENIAGGAP-----LTLDEAWEAARM---AGL------------------------AED--IRAMPMGMHT 580 (686)
T ss_pred CccC-cccHHHHHhcCCC-----CCHHHHHHHHHH---cCc------------------------HHH--HHhccccccc
Confidence 7655 5799999998642 112222222221 111 111 2246788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+ .+||||||||++|||||+++|++|+||||||+||+.++..|.+.|+++ ++|+|+ ++|. .++.+.+|+
T Consensus 581 ~ige~G-~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr-~~~i~~~D~ 653 (686)
T TIGR03797 581 VISEGG-GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHR-LSTIRNADR 653 (686)
T ss_pred cccCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecC-hHHHHcCCE
Confidence 999876 469999999999999999999999999999999999999999999863 356555 4444 366788999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+++++|+++++++
T Consensus 654 Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 654 IYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999864
No 170
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1e-36 Score=332.31 Aligned_cols=205 Identities=24% Similarity=0.343 Sum_probs=173.8
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+++||++++|+++||+|||||||||||++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 5677877763 2469999999999999999999999999999999999876 468999999987631
Q ss_pred -----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 937 -----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 937 -----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
..+++.++|++|++.+++.+|++||+.+...... ....++.++.++++++.+++.+..++. +..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHH
Confidence 2345779999999998888999999988643111 123344456788999999998777765 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877999999999986 577889999999864
No 171
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-36 Score=336.47 Aligned_cols=214 Identities=27% Similarity=0.384 Sum_probs=172.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 14 VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 4999999999999999999999999999999999999988 9999999998765432 24699999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.++....+... ..+. . .. ....+....++.+++.+||++..++.+
T Consensus 91 tv~~~l~~~~~~~~~~~-------~~~~-~-----~~-----------~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 91 TVLENVMVAAQARTGSG-------LLLA-R-----AR-----------REEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CHHHHHHHHHhhccccc-------cccc-c-----cc-----------ccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 99999998754321000 0000 0 00 000011234577889999987666544
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++.. .+. +|+.++|+..++.+++|+|++|++|
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tii~vsH~~~~~~~~~d~i~~l~~G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGI-TVLLVEHDMDVVMSLADRVTVLDQG 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCC-EEEEEecCHHHHHHhCCEEEEEeCC
Confidence 46999999999999999999999999999999999999999999998764 444 4556778888999999999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
++++.|+++++.
T Consensus 220 ~i~~~~~~~~~~ 231 (236)
T cd03219 220 RVIAEGTPDEVR 231 (236)
T ss_pred EEEeecCHHHhc
Confidence 999999988763
No 172
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=346.07 Aligned_cols=217 Identities=25% Similarity=0.347 Sum_probs=181.3
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67899998885210 011359999999999999999999999999999999999876 56899999998763
Q ss_pred h-------hhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 000913 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1226)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 1005 (1226)
. ..+++.+|||+|++ .+++ .||.|++.|..... ..+.++.++++.++++.++|. ++.++. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23567799999986 3444 69999999875432 234455667789999999996 455554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 47788999999986 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999985
No 173
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=348.10 Aligned_cols=218 Identities=25% Similarity=0.309 Sum_probs=181.2
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
+.++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceecc
Confidence 67899998885211 011358999999999999999999999999999999999876 45799999886531
Q ss_pred ---------------------------hhhhcceeeEeecCC-CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 000913 936 ---------------------------QETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVM 987 (1226)
Q Consensus 936 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l 987 (1226)
....++.+|||+|++ ..+...||+|++.|+.... ..+.++.++++.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 2334579999999875432 234556667889999
Q ss_pred HHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000913 988 ELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1066 (1226)
Q Consensus 988 ~~l~l~-~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~ 1066 (1226)
+.++|. +..++. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566665 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred CcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1067 PSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1067 p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
+. .+.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 86 47889999999986 689999975
No 174
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=335.27 Aligned_cols=205 Identities=30% Similarity=0.400 Sum_probs=171.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1226)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 5999999999999999999999999999999999999998 9999999998765321 357999999998899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.+.....+... ......++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999988654322100 001123566788999987666544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINREL-GLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999876532 4455557778888999999999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999887653
No 175
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=343.90 Aligned_cols=224 Identities=27% Similarity=0.381 Sum_probs=180.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-------CccceEEEecCCC-CC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHD-NH 237 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~-------~~~~~~~yv~Q~d-~~ 237 (1226)
.+|+|||+.|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 4999999999999999999999999999999999999998 99999999987521 1235799999985 24
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-ccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1226)
+...||.||+.|+....+... .+....+..+++.+||. ...++
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~-- 140 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEK-- 140 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccC--
Confidence 445799999999764432110 01122456778899995 34443
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
.++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|+|+
T Consensus 141 ---~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 141 ---SPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ---CcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 3557999999999999999999999999999999999999999999998754 3 4456667888899999999999
Q ss_pred EEcCCeEEEecChhHHH---HHHHhcCCCCCCCCChHHHH
Q 000913 397 LLSDGQIVYQGPRELVL---EFFASMGFRCPKRKGVADFL 433 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~---~~F~~~Gf~cp~~~~~adfl 433 (1226)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999999874 34556777776655444433
No 176
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.7e-36 Score=330.48 Aligned_cols=199 Identities=30% Similarity=0.418 Sum_probs=167.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 4999999999999999999999999999999999999988 9999999998754432 35799999998888899999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.++.+..+... .+....++.+++.+||++..+..+ +.|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hhC
Confidence 99988654322100 001123566788999987776655 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++...+. +|+.++|+..++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGT-TTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 999999999999999999999999999999999999999999988653344 4555778888999999999999999999
Q ss_pred Eec
Q 000913 405 YQG 407 (1226)
Q Consensus 405 ~~G 407 (1226)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 177
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=338.97 Aligned_cols=215 Identities=20% Similarity=0.259 Sum_probs=181.6
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 478899988774 2469999999999999999999999999999999999876 4679999999765
Q ss_pred Ch----------------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-c
Q 000913 935 KQ----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-Q 997 (1226)
Q Consensus 935 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-~ 997 (1226)
.. ..+++.++|++|++.+++.+||+||+.+...... .....+.++++.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 2345679999999999989999999987542111 123444566788999999997753 4
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCe
Q 000913 998 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1077 (1226)
Q Consensus 998 ~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~ 1077 (1226)
.. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 43 4579999999999999999999999999999999999999999999999877999999999987 47778999
Q ss_pred EEEEecCcEEEEeCCC
Q 000913 1078 LFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1078 v~ll~~Gg~~~y~G~~ 1093 (1226)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999986 789998874
No 178
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7e-37 Score=333.51 Aligned_cols=199 Identities=27% Similarity=0.421 Sum_probs=165.1
Q ss_pred eEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhhhcceeeEeecCCCCC--CCCCH
Q 000913 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHS--PFVTI 958 (1226)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 958 (1226)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. ..+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999876 46899999998653 3456799999998763 33799
Q ss_pred HHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000913 959 YESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1226)
Q Consensus 959 ~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsg 1037 (1226)
+||+.+....... .....+..++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00112233456889999999987776653 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1038 LD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999878999999999987 47788999999975 4 56554
No 179
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-37 Score=313.06 Aligned_cols=206 Identities=30% Similarity=0.444 Sum_probs=175.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc---ceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~---~~~~yv~Q~d~~~~~lT 242 (1226)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|+|++||.+++.+.+. +.-+.++|+..+-+..|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 4999999999999999999999999999999999999998 99999999999888764 56789999988877889
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+|-+.+++.-.+.+.. ..+...+++.+|...++.+.+. +..+
T Consensus 92 v~eVV~mGr~p~~~g~~--------------------------------~~e~~~i~~~ala~~d~~~la~-----R~y~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGRE--------------------------------PEEDERIAAQALAATDLSGLAG-----RDYR 134 (259)
T ss_pred HHHHHHhcccccccCCC--------------------------------chhhHHHHHHHHHHcChhhhhc-----cchh
Confidence 99999998754322111 0012234666777778877665 3456
Q ss_pred CCChhHhhHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 323 GISGGQKKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~------~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
.|||||||||.+||.|+. ++++||||||||+||......+++..|++++. + ..|+++.|+..-+..++|+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhheee
Confidence 799999999999999985 44689999999999999999999999999974 3 566678899999999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000913 397 LLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1226)
+|.+||++..|++++++
T Consensus 213 ll~~Grv~a~g~p~~vl 229 (259)
T COG4559 213 LLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeCCeEeecCCHHHhc
Confidence 99999999999999875
No 180
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.6e-36 Score=332.87 Aligned_cols=208 Identities=24% Similarity=0.317 Sum_probs=175.5
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ +++.+|+|+|+++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56788887763 12369999999999999999999999999999999999876 56899999998653
Q ss_pred h---h---hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 Q---E---TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~---~---~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
. . .+++.++|++|++.+++.+|++||+.+....+ ..+.++..+.++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 2 1 24567999999998888899999998865433 123344455678899999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|+++ ++.+.+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999777899999999987 47778999999986 554
No 181
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.4e-36 Score=334.78 Aligned_cols=217 Identities=24% Similarity=0.280 Sum_probs=173.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
+.++|+++.++... ....+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTGG---------GSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCCC---------cceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 56788887764110 01369999999999999999999999999999999999876 46899999998764
Q ss_pred h------hhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000913 936 Q------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1226)
Q Consensus 936 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1226)
. ..+++.++|++|++ .+.+.+||+||+.+........ ...+..+..++++++.+++. ...+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999998 4567899999998865433211 11111122235788999985 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 46778999999986 6
Q ss_pred EEEEeC
Q 000913 1086 QEIYVG 1091 (1226)
Q Consensus 1086 ~~~y~G 1091 (1226)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 777654
No 182
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-36 Score=332.47 Aligned_cols=194 Identities=25% Similarity=0.374 Sum_probs=163.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 17 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 17 PALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 4999999999999999999999999999999999999998 999999999875432 2357999999998899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.++.+..+... .+....++.+++.+||++..+..+
T Consensus 94 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 136 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP--- 136 (216)
T ss_pred cccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999998754322100 001123566788999987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++..++|+|++|+
T Consensus 137 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~ 212 (216)
T TIGR00960 137 --MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RG-TTVLVATHDINLVETYRHRTLTLS 212 (216)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998754 34 455667888889999999999999
Q ss_pred CCeE
Q 000913 400 DGQI 403 (1226)
Q Consensus 400 ~G~i 403 (1226)
+|++
T Consensus 213 ~G~i 216 (216)
T TIGR00960 213 RGRL 216 (216)
T ss_pred CCcC
Confidence 9975
No 183
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=337.27 Aligned_cols=214 Identities=27% Similarity=0.381 Sum_probs=181.1
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+|+++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788887763 2469999999999999999999999999999999999876 56899999998753
Q ss_pred h----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 936 Q----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 936 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
. ...++.++|++|++.+++.+||+||+.+...++. ..+.++.+..++++++.+++.+..+.. +..||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 2 1234679999999988888999999987643221 123334456788999999998766655 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|||||+||++|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999986 58889999999986 6899888
Q ss_pred CC
Q 000913 1092 PL 1093 (1226)
Q Consensus 1092 ~~ 1093 (1226)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 184
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=343.99 Aligned_cols=215 Identities=26% Similarity=0.381 Sum_probs=182.3
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++. ++.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYSD------------GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeCC------------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 5889999988741 2459999999999999999999999999999999999876 5689999999876
Q ss_pred C-----hhhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000913 935 K-----QETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1226)
Q Consensus 935 ~-----~~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~L 1008 (1226)
. ...+++.+||++|++. .+...||+||+.+..... ..+.++.+++++++++.++|.+..++. +..|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 3 1235567999999974 234579999998864322 234445556789999999998877776 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
|||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999987 46778999999986 689
Q ss_pred EEeCCC
Q 000913 1088 IYVGPL 1093 (1226)
Q Consensus 1088 ~y~G~~ 1093 (1226)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999985
No 185
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.5e-36 Score=336.75 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=178.3
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1226)
++++|+++.++ +..+|+|+|+++++||+++|+|+|||||||||++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788887763 235899999999999999999999999999999999987521 12899999998
Q ss_pred cCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC----cccccccCCC
Q 000913 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGLP 1003 (1226)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~~ 1003 (1226)
+... ...++.++|++|++.+++ .|++||+.+....+. ..+.++.++.++++++.++|. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999988888 999999998654331 123344456788999999997 444444
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|++. ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999876 489999999986 47788999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 689988874
No 186
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-36 Score=330.80 Aligned_cols=201 Identities=29% Similarity=0.397 Sum_probs=168.3
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 45999999999999999999999999999999999999988 9999999988753 246799999998888889999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.++....+... ......++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99998754322100 001123567888999987666554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc--CCe
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~--~G~ 402 (1226)
|||||||++||+||+.+|+++||||||+|||+.++..+.+.|+++....+ ++|+.++|+..++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETG-KTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 99999999999999999999999999999999999999999998754334 455557788888999999999999 799
Q ss_pred EEEecChh
Q 000913 403 IVYQGPRE 410 (1226)
Q Consensus 403 iv~~G~~~ 410 (1226)
+++.++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99988653
No 187
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=348.75 Aligned_cols=218 Identities=25% Similarity=0.342 Sum_probs=181.4
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++... ...+.+|+|||++|++|+++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 589999999885210 012359999999999999999999999999999999999876 5689999999765
Q ss_pred Ch-------------------hhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC
Q 000913 935 KQ-------------------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN 993 (1226)
Q Consensus 935 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~ 993 (1226)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ..+.++..+++.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23567799999987 3454 59999998864322 234445556788999999996
Q ss_pred -cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 000913 994 -PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1072 (1226)
Q Consensus 994 -~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~ 1072 (1226)
+..+.. +..|||||||||+|||+|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455554 4579999999999999999999999999999999999999999999999877999999999986 477
Q ss_pred HhcCeEEEEecCcEEEEeCCC
Q 000913 1073 EAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1073 ~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999986 799999975
No 188
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.4e-36 Score=333.72 Aligned_cols=204 Identities=22% Similarity=0.369 Sum_probs=171.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 14 KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 4999999999999999999999999999999999999998 9999999998754332 24699999999899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 91 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 131 (232)
T cd03218 91 TVEENILAVLEIRGLSK----------------------------------KEREEKLEELLEEFHITHLRKSKA----- 131 (232)
T ss_pred cHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 99999988643221100 001123567888999987666554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+ ++||.++|+..++.+++|+|++|++|
T Consensus 132 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G 209 (232)
T cd03218 132 SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RG-IGVLITDHNVRETLSITDRAYIIYEG 209 (232)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 34 45566778888999999999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
++++.|+.+++.
T Consensus 210 ~i~~~~~~~~~~ 221 (232)
T cd03218 210 KVLAEGTPEEIA 221 (232)
T ss_pred eEEEEeCHHHhh
Confidence 999999987653
No 189
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-36 Score=331.54 Aligned_cols=193 Identities=26% Similarity=0.380 Sum_probs=164.2
Q ss_pred eEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhhcceeeEeecCCC-CCCCC
Q 000913 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDI-HSPFV 956 (1226)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 956 (1226)
+.+|+|+||++++|+++||+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999876 468999999986532 234567999999974 35678
Q ss_pred CHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000913 957 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1226)
Q Consensus 957 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTs 1036 (1226)
|++||+.+....+ .....+.++.++++++.++|.+..++.+ ..|||||||||+||++|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998864332 1223344456888999999987766653 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1037 gLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
|||+.++..+++.|++++++|+|||++||++. ++...||++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 577789999999864
No 190
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-37 Score=322.69 Aligned_cols=206 Identities=27% Similarity=0.378 Sum_probs=181.3
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh----hhcceeeEeecCCCCCC
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDIHSP 954 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 954 (1226)
+...+++|||+++++||++||+||||||||||+|+|+|..+ +..|+|.++|.++... ..+..++.-+|...+|+
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 56789999999999999999999999999999999999887 5689999999987542 23456889999999999
Q ss_pred CCCHHHHHHHHHHhhc--------CCC-CCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhC
Q 000913 955 FVTIYESLLFSAWLRL--------SPE-VDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVAN 1025 (1226)
Q Consensus 955 ~lTv~E~l~f~~~lr~--------~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~ 1025 (1226)
.|||.||+..++..+. +.. ...++..+++.++|+.+||.+.++...| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998765331 111 1245566778999999999999999865 5999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1026 PSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1026 p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|++|+||||.+||.+.....+.+.|+++.+ .|.||+++-|+++. ++.+||||++|+. |+++..|++
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P 234 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTP 234 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCH
Confidence 999999999999999999999999999987 47999999999985 9999999999986 799999986
No 191
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.2e-37 Score=356.19 Aligned_cols=254 Identities=27% Similarity=0.394 Sum_probs=195.4
Q ss_pred hhHHHHHHhhhccccChHHHHHHHHHHhhh-cCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhc
Q 000913 80 ERQRLIDKLVKVTDVDNERFLLKLKNRIDR-VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRII 158 (1226)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 158 (1226)
...+..|+++...+.+++. ...-.. .-...|.++++.+||+|.++.
T Consensus 286 ~g~aa~d~i~~~l~~~~~~-----~~~~~~~~~~~~~~~ei~~~~l~~~y~~---------------------------- 332 (559)
T COG4988 286 AGEAAADKLFTLLESPVAT-----PGSGEKAEVANEPPIEISLENLSFRYPD---------------------------- 332 (559)
T ss_pred hhhhHHHHHHHHhcCCCCC-----CCCccccccccCCCceeeecceEEecCC----------------------------
Confidence 4456666666666655541 111111 122346889999999999853
Q ss_pred CCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCC
Q 000913 159 PSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD 235 (1226)
Q Consensus 159 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d 235 (1226)
. +++++|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+..+ +++++||+|++
T Consensus 333 --g---~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p 404 (559)
T COG4988 333 --G---KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNP 404 (559)
T ss_pred --C---CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCC
Confidence 1 15899999999999999999999999999999999999998 9999999999877754 58999999987
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
.++ ..|+||||.++.. ....+.+.++.++. .+.+.+.-+...||.
T Consensus 405 ~lf-~gTireNi~l~~~----~~s~e~i~~al~~a------------------------------~l~~~v~~p~GLdt~ 449 (559)
T COG4988 405 YLF-AGTIRENILLARP----DASDEEIIAALDQA------------------------------GLLEFVPKPDGLDTV 449 (559)
T ss_pred ccc-cccHHHHhhccCC----cCCHHHHHHHHHHh------------------------------cHHHhhcCCCcccch
Confidence 555 5799999998752 12222222222111 112233336678999
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
+|+.+ ++|||||+|||++||||+.+++++++||||++||.+|+..|.+.|.++++ ++|++++ +| +.+...-+|+|
T Consensus 450 ige~G-~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~i-tH-rl~~~~~~D~I 524 (559)
T COG4988 450 IGEGG-AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVI-TH-RLEDAADADRI 524 (559)
T ss_pred hccCC-CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEE-Ec-ChHHHhcCCEE
Confidence 99865 47999999999999999999999999999999999999999999999864 4565554 44 46777889999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000913 396 ILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1226)
++|++|+++++|.++++.+
T Consensus 525 ~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 525 VVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EEecCCceeccCCHHHHhh
Confidence 9999999999999999853
No 192
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-37 Score=323.58 Aligned_cols=221 Identities=28% Similarity=0.401 Sum_probs=188.1
Q ss_pred ccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCCCCC
Q 000913 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1226)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1226)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...+. .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4567999999999999999999999999999999999999999 99999999999888764 4578899999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
++|||.||+..++..+.. .. .. +... ....+..+....+..+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~---~~--------l~~~--------~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LS---GL--------LGRP--------RARKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hh---hh--------hccc--------cchhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999998754421 00 00 0000 00001123345678899999999999998875
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
||+||+||+.|||||+.+|++|+||||.+||.+..+.++.+.|+++.+ .++++|+.+-|++.-++.+||+|+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEec
Confidence 999999999999999999999999999999999999999999999875 45577777999999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000913 399 SDGQIVYQGPRELVLE 414 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1226)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999864
No 193
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.2e-36 Score=344.62 Aligned_cols=204 Identities=27% Similarity=0.396 Sum_probs=175.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1226)
.+|+|+||.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 16 ~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv 92 (301)
T TIGR03522 16 NALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYV 92 (301)
T ss_pred EEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999998875422 23679999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+||+.|.+++.+... ++....++.+++.+||++..++.++ .
T Consensus 93 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 133 (301)
T TIGR03522 93 REYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG-----Q 133 (301)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----h
Confidence 999998765543110 0011235678999999988776654 6
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||||||+||+||+++|++|||||||+|||+.++..+.+.|+++. .+ ++|+.++|...++.++||+|++|++|++
T Consensus 134 LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~i 210 (301)
T TIGR03522 134 LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGKI 210 (301)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999874 34 5566678889999999999999999999
Q ss_pred EEecChhHHHH
Q 000913 404 VYQGPRELVLE 414 (1226)
Q Consensus 404 v~~G~~~~~~~ 414 (1226)
++.|+.+++..
T Consensus 211 ~~~g~~~~~~~ 221 (301)
T TIGR03522 211 VADKKLDELSA 221 (301)
T ss_pred EEeCCHHHHHH
Confidence 99999998754
No 194
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=344.58 Aligned_cols=217 Identities=22% Similarity=0.326 Sum_probs=180.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++.... ..+.+|+|||++|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~~--------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGTP--------YEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCCc--------cccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 678999988852110 12359999999999999999999999999999999999876 56899999998763
Q ss_pred h-------hhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 000913 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1226)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 1005 (1226)
. ..+++.+|||+|++ .+++ .||.||+.|..... ..+.++..+++.++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23567799999986 3444 59999999864332 234455567789999999996 566654 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
..||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 57999999999999999999999999999999999999999999999975 4899999999987 47789999999986
Q ss_pred cEEEEeCCC
Q 000913 1085 GQEIYVGPL 1093 (1226)
Q Consensus 1085 g~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 799999874
No 195
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.7e-36 Score=333.86 Aligned_cols=203 Identities=25% Similarity=0.367 Sum_probs=167.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCceeEEEEcCccCCCCC-----ccceEEEecCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL-----DPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHD 235 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d 235 (1226)
++|+|+|+++++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 4999999999999999999999999999999999999 777 999999999875432 235799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
.++ .+||+||+.++....+.... .+....++.+++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhcc
Confidence 777 89999999987543221000 00112356678899998765544
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
+. +..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . ++||.++|+..++.+++|+|
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEE
Confidence 20 357999999999999999999999999999999999999999999998754 3 55666788888999999999
Q ss_pred EEEcCCeEEEecChhH
Q 000913 396 ILLSDGQIVYQGPREL 411 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~ 411 (1226)
++|++|++++.|++++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998764
No 196
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-37 Score=354.17 Aligned_cols=256 Identities=22% Similarity=0.308 Sum_probs=198.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.++...+..|+-++.+++++. .. +.-..+.+...++++||+|+++.
T Consensus 303 lgq~~~Sa~Rl~~i~~q~~e~-----~~--~~~~~~~~~~~l~~~~vsF~y~~--------------------------- 348 (573)
T COG4987 303 LGQVIASARRLNDILDQKPEV-----TF--PDEQTATTGQALELRNVSFTYPG--------------------------- 348 (573)
T ss_pred hhHHHHHHHHHhhhccCCccc-----CC--CccccCCccceeeeccceeecCC---------------------------
Confidence 456777788888888888772 11 11112222226999999999864
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
++.++|+|+|+++++||.+||+|+||||||||++.|+|-++|+ +|+|++||.++..... ++.+++++|
T Consensus 349 -----~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Q- 419 (573)
T COG4987 349 -----QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQ- 419 (573)
T ss_pred -----CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhcc-
Confidence 2234999999999999999999999999999999999999999 9999999999877765 468999999
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
..|++..|+|+||.++. ++...|.+.++.++.. .++. ..+.++..||
T Consensus 420 r~hlF~~Tlr~NL~lA~----~~AsDEel~~aL~qvg---------------------------L~~l--~~~~p~gl~t 466 (573)
T COG4987 420 RVHLFSGTLRDNLRLAN----PDASDEELWAALQQVG---------------------------LEKL--LESAPDGLNT 466 (573)
T ss_pred chHHHHHHHHHHHhhcC----CCCCHHHHHHHHHHcC---------------------------HHHH--HHhChhhhhc
Confidence 56788889999999865 2223333333222110 0111 2234567789
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+. .||||||||++|||+|+++.++++|||||.|||+.|+.++++.|.+- ..++|+++ ++|+... .+.||+
T Consensus 467 ~lge~G~-~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~--~~~kTll~-vTHrL~~-le~~dr 541 (573)
T COG4987 467 WLGEGGR-RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEH--AEGKTLLM-VTHRLRG-LERMDR 541 (573)
T ss_pred hhccCCC-cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHH--hcCCeEEE-Eeccccc-HhhcCE
Confidence 9998655 69999999999999999999999999999999999999999999764 35666666 5555444 567999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+++++|.+.++++
T Consensus 542 Iivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 542 IIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEECCeeeecCCHHhhhc
Confidence 99999999999999999864
No 197
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.1e-36 Score=330.65 Aligned_cols=202 Identities=25% Similarity=0.415 Sum_probs=167.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 14 QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988765432 35699999999899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHc-CCcccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1226)
||+||+.++....+ .. + ....++.+++.+ ++++..++.
T Consensus 91 t~~~~l~~~~~~~~--~~-----~-----------------------------~~~~~~~~l~~~~~l~~~~~~~----- 129 (222)
T cd03224 91 TVEENLLLGAYARR--RA-----K-----------------------------RKARLERVYELFPRLKERRKQL----- 129 (222)
T ss_pred cHHHHHHHHhhhcC--ch-----h-----------------------------HHHHHHHHHHHHHhhhhhhhCc-----
Confidence 99999998653321 00 0 011233455566 465555544
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+|++|++
T Consensus 130 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (222)
T cd03224 130 AGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLER 207 (222)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEeeC
Confidence 346999999999999999999999999999999999999999999998764 3 44555577888899999999999999
Q ss_pred CeEEEecChhHHH
Q 000913 401 GQIVYQGPRELVL 413 (1226)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1226)
|++++.|+.+++.
T Consensus 208 G~i~~~~~~~~~~ 220 (222)
T cd03224 208 GRVVLEGTAAELL 220 (222)
T ss_pred CeEEEeCCHHHHh
Confidence 9999999987653
No 198
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.7e-36 Score=330.62 Aligned_cols=203 Identities=31% Similarity=0.443 Sum_probs=170.4
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1226)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 35999999999999999999999999999999999999998 999999999875321 2356999999988888999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+||+.+..+..+.... +....++.+++.+||++..++.+ .
T Consensus 92 v~~~l~~~~~~~~~~~~----------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 132 (220)
T cd03263 92 VREHLRFYARLKGLPKS----------------------------------EIKEEVELLLRVLGLTDKANKRA-----R 132 (220)
T ss_pred HHHHHHHHHHHcCCCHH----------------------------------HHHHHHHHHHHHcCCHHHHhChh-----h
Confidence 99999986544321100 01123466788999987777655 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998753 3 556667788888889999999999999
Q ss_pred EEEecChhHH
Q 000913 403 IVYQGPRELV 412 (1226)
Q Consensus 403 iv~~G~~~~~ 412 (1226)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 199
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.7e-36 Score=330.80 Aligned_cols=211 Identities=25% Similarity=0.321 Sum_probs=173.2
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++.. .+.+.+|+|+|+++++|++++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 5678888776421 012469999999999999999999999999999999999876 46899999998753
Q ss_pred hh---h---hc-ceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000913 936 QE---T---FA-RISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1226)
Q Consensus 936 ~~---~---~~-~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~L 1008 (1226)
.. . ++ +.++|++|++.+++.+||+||+.+....+. ....+..+.+.++++.+++.+..+..+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 21 1 22 569999999988889999999988654331 223334456789999999987776653 579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
|||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 99999999999999999999999999999999999999999999975 4899999999986 34 55799999986 554
Q ss_pred E
Q 000913 1088 I 1088 (1226)
Q Consensus 1088 ~ 1088 (1226)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 3
No 200
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=317.40 Aligned_cols=212 Identities=26% Similarity=0.402 Sum_probs=177.8
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|++..| ++.++|++||+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecC
Confidence 5667776555 45789999999999999999999999999999999999876 45899999999875
Q ss_pred h----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcC-CCcccccccCCCCCCCCCH
Q 000913 936 Q----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE-LNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 936 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~g~~~~~~LSg 1010 (1226)
. ...++.++||||....|+.+||+|||..++..+.. ++..+..++++.+.+= |.+.++...| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 4 23556799999999999999999999988755432 1111222667777663 5556666644 5999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
||||.|+|||||+++|++|+|||||.||-|.-...|.++|+++.++ |.||+.+-+... ...+.+||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 779999988766 47889999999986 79999
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 218 ~G~~ 221 (237)
T COG0410 218 SGTA 221 (237)
T ss_pred ecCH
Confidence 9985
No 201
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=342.74 Aligned_cols=216 Identities=24% Similarity=0.304 Sum_probs=182.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++.. ..+.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 37889999887421 12359999999999999999999999999999999999876 5689999999876
Q ss_pred Ch---hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ...++.+||++|++. .++..||+||+.|..... ..+.++.+++++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 42 235567999999974 567789999999865332 2345555677899999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++.. + ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~-~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE-V-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 9999999999863 5 67999999986 79998
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 202
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-37 Score=366.83 Aligned_cols=222 Identities=27% Similarity=0.425 Sum_probs=185.0
Q ss_pred CCccCC-CCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEE
Q 000913 846 GMVLPF-EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT 924 (1226)
Q Consensus 846 ~~~~~~-~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~ 924 (1226)
|...|. -...++|+||+|.|+..+ +..+|+|+||+++|||.||||||||+||||+.++|..... +.+
T Consensus 455 G~~~p~~~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--Pts 522 (716)
T KOG0058|consen 455 GTLAPDHLQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTS 522 (716)
T ss_pred CccccccccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 433442 345799999999998754 4679999999999999999999999999999999998876 678
Q ss_pred EEEEEcCccCCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHH-----HHHHHHHcCCCccc
Q 000913 925 GNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMF-----IDEVMELVELNPLR 996 (1226)
Q Consensus 925 G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~-----v~~~l~~l~l~~~~ 996 (1226)
|+|.+||+|+++ ..+++.+|+|.|+|.++. -||+|||.|+.. ..+.++.... +.+.+. ++.+-.
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~--~~p~gY 594 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFIT--NFPDGY 594 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHH--hCcccc
Confidence 999999999754 457889999999999986 599999999753 3343332211 222222 345567
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcC
Q 000913 997 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1076 (1226)
Q Consensus 997 ~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D 1076 (1226)
|+.+|..| ..||||||||++|||||++||.||||||+||.||+++...|.++|.++.+ ++|||++.|+.| ..+.+|
T Consensus 595 ~T~VGEkG-~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad 670 (716)
T KOG0058|consen 595 NTVVGEKG-SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHAD 670 (716)
T ss_pred ccccCCcc-ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--Hhhhcc
Confidence 88899876 47999999999999999999999999999999999999999999998864 699999999986 578899
Q ss_pred eEEEEecCcEEEEeCC
Q 000913 1077 ELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1077 ~v~ll~~Gg~~~y~G~ 1092 (1226)
+|+++++ |+++..|.
T Consensus 671 ~Ivvi~~-G~V~E~G~ 685 (716)
T KOG0058|consen 671 QIVVIDK-GRVVEMGT 685 (716)
T ss_pred EEEEEcC-CeEEeccc
Confidence 9999986 79999995
No 203
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=337.50 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=177.0
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 488999998874 2359999999999999999999999999999999999876 4689999998765
Q ss_pred ChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
. ..++.++|++|++.+++.+||+||+.+... . ..++.+.++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~----~-----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK----G-----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc----c-----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 345679999999988888999999987421 0 1234578899999998777665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|++||++|+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999864 5899999999987 47788999999986 688888764
No 204
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-36 Score=339.60 Aligned_cols=215 Identities=23% Similarity=0.340 Sum_probs=173.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCC-CCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD-NHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d-~~~~~l 241 (1226)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 4999999999999999999999999999999999999998 9999999998764322 35799999986 367789
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+|||.|+....+... .+....++.+++.+||++..+..+
T Consensus 98 tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13650 98 TVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP----- 138 (279)
T ss_pred cHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 99999998754322110 011224567889999987666554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++++..+.| |+.++|+..++ ..+|+|++|++|
T Consensus 139 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~t-ilivtH~~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 139 ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMT-VISITHDLDEV-ALSDRVLVMKNG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999986533444 44466777777 589999999999
Q ss_pred eEEEecChhHHHH---HHHhcCCCCC
Q 000913 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1226)
Q Consensus 402 ~iv~~G~~~~~~~---~F~~~Gf~cp 424 (1226)
+++..|+++++.. .++..|+.+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 217 QVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred EEEEECCHHHHHcChHHHHHcCCCCc
Confidence 9999999987653 2334455433
No 205
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4.1e-36 Score=329.81 Aligned_cols=208 Identities=25% Similarity=0.340 Sum_probs=177.5
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4677776653 2469999999999999999999999999999999999876 568999999987643
Q ss_pred hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHH
Q 000913 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1226)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl 1016 (1226)
.. .+.++|++|++.+++.+|++||+.+....+. .. +..+.++++.+++.+..+..+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2569999999988888999999987654332 11 234788999999988777653 56999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 000913 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1226)
Q Consensus 1017 ~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~ 1094 (1226)
+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999877999999999987 47789999999986 7899999864
No 206
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=335.16 Aligned_cols=212 Identities=22% Similarity=0.335 Sum_probs=178.1
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ .+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 478899988763 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Chh----hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCC
Q 000913 935 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~LS 1009 (1226)
... ..++.++|++|++.+++.+||.||+.+..... ...+..+.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 24567999999998888899999998854221 1222334567778887 466555544 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 58899999999986 79999
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9975
No 207
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=6.6e-36 Score=337.13 Aligned_cols=206 Identities=21% Similarity=0.355 Sum_probs=171.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1226)
.+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++
T Consensus 21 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 97 (269)
T PRK11831 21 CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFT 97 (269)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCC
Confidence 4999999999999999999999999999999999999998 9999999988754321 356999999988899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.++...... .. . .+....+..+++.+||++..+..+
T Consensus 98 ~~tv~enl~~~~~~~~~-~~--------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 141 (269)
T PRK11831 98 DMNVFDNVAYPLREHTQ-LP--------A------------------------PLLHSTVMMKLEAVGLRGAAKLMP--- 141 (269)
T ss_pred CCCHHHHHHHHHHHccC-CC--------H------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 99999999886432100 00 0 001123456788999988777654
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++... .+++||.++|+..++.+++|+|++|+
T Consensus 142 --~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l~ 218 (269)
T PRK11831 142 --SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIVA 218 (269)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEEE
Confidence 469999999999999999999999999999999999999999999987653 24455557888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (269)
T PRK11831 219 DKKIVAHGSAQALQ 232 (269)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 208
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-36 Score=334.01 Aligned_cols=214 Identities=29% Similarity=0.401 Sum_probs=171.7
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHI 238 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1226)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 35999999999999999999999999999999999999988 999999999876543 135799999998889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+.+||+||+.++..... . . .... .+.. .......++.+++.+||.+..++.
T Consensus 91 ~~~tv~~~l~~~~~~~~-~-~---~~~~------~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~--- 141 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-S-T---WRSL------FGLF---------------PKEEKQRALAALERVGLLDKAYQR--- 141 (241)
T ss_pred ccCcHHHHHHhhhcccc-h-h---hhhh------cccC---------------cHHHHHHHHHHHHHcCChhhhCCC---
Confidence 99999999987642110 0 0 0000 0000 000122456678899998666554
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
+..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|++++...+ ++||.++|+..++.+++|++++|
T Consensus 142 --~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 142 --ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEG-ITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 456999999999999999999999999999999999999999999998765334 45555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988753
No 209
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-36 Score=337.75 Aligned_cols=203 Identities=26% Similarity=0.327 Sum_probs=169.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC-CCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1226)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 4999999999999999999999999999999999999998 9999999998765332 357999999853 55678
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.|+....+... .+....++.+++.+||.+..++.+
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 99999998754321100 011123567889999987766554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++. .+ .+|+.++|+..++.+++|+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-QG-KTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 34 45566788888999999999999999
Q ss_pred eEEEecChhHH
Q 000913 402 QIVYQGPRELV 412 (1226)
Q Consensus 402 ~iv~~G~~~~~ 412 (1226)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 210
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-36 Score=327.32 Aligned_cols=197 Identities=27% Similarity=0.404 Sum_probs=166.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+|
T Consensus 14 ~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 14 TALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 4999999999999999999999999999999999999988 9999999987653 23567999999998899999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000913 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1226)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1226)
|+.+.....+... .+....++++++.+||++..++.+ ..||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (210)
T cd03269 90 QLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EELS 130 (210)
T ss_pred HHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhCC
Confidence 9988654332100 001123567788999987766554 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEE
Q 000913 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1226)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1226)
|||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ .+ .+|+.++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 131 KGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-AG-KTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 9999999999999999999999999999999999999999998764 34 455667888889999999999999999987
Q ss_pred ec
Q 000913 406 QG 407 (1226)
Q Consensus 406 ~G 407 (1226)
.|
T Consensus 209 ~~ 210 (210)
T cd03269 209 YG 210 (210)
T ss_pred cC
Confidence 65
No 211
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-36 Score=333.63 Aligned_cols=213 Identities=23% Similarity=0.316 Sum_probs=179.9
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 67888887763 2469999999999999999999999999999999999876 56899999998642
Q ss_pred ---------hhhhcceeeEeecCCCCCCCCCHHHHHHHHH-HhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000913 936 ---------QETFARISGYCEQNDIHSPFVTIYESLLFSA-WLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1226)
Q Consensus 936 ---------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~-~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1226)
....++.++|++|++.+++.+||.||+.+.. ... .....+..+.+.++++.+|+.+..+..+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 1234567999999999999999999997532 221 1223344566889999999987777663
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
..||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|.+ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999987 47788999999986 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 89998874
No 212
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.2e-36 Score=335.91 Aligned_cols=214 Identities=22% Similarity=0.303 Sum_probs=180.7
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ .+.+|+||||++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 35788887763 2469999999999999999999999999999999999876 46899999997653
Q ss_pred h----------------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccc
Q 000913 936 Q----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSL 999 (1226)
Q Consensus 936 ~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~ 999 (1226)
. ..+++.++|++|++.+++..|+.||+.+..... ......+..+.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 1 134567999999999898999999998753221 1123444556788999999998777665
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeE
Q 000913 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1226)
Q Consensus 1000 ~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v 1078 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998764 899999999987 477889999
Q ss_pred EEEecCcEEEEeCCC
Q 000913 1079 FLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1079 ~ll~~Gg~~~y~G~~ 1093 (1226)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 789988874
No 213
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.1e-36 Score=331.87 Aligned_cols=212 Identities=26% Similarity=0.381 Sum_probs=177.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 46778877763 2469999999999999999999999999999999999876 46899999998753
Q ss_pred h--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
. ....+.++|++|++.+++.+|++||+.+.+..+ ....++..+.+.++++.++|.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 2 122356999999998888899999998765433 1233344566889999999987776653 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
||++||++|+.+|+||+|||||+|||+.++..+++.|+++++ +|+|||+++|+++. + +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999874 58999999999873 4 45999999986 68888886
Q ss_pred C
Q 000913 1093 L 1093 (1226)
Q Consensus 1093 ~ 1093 (1226)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 214
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-36 Score=333.19 Aligned_cols=205 Identities=27% Similarity=0.411 Sum_probs=170.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 15 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 15 KAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred eEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 4999999999999999999999999999999999999998 9999999988754332 357999999998999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc--cccccccccc
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV--CADTMVGDEM 320 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~~ 320 (1226)
|+||+.++.+..+... .+....+..+++.+||+. ..++ .
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~-----~ 132 (242)
T cd03295 92 VEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADR-----Y 132 (242)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhc-----C
Confidence 9999998654322100 001123566788999975 4443 3
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++||.++|+..++.+++|+|++|++
T Consensus 133 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tvii~sH~~~~~~~~~d~i~~l~~ 211 (242)
T cd03295 133 PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELG-KTIVFVTHDIDEAFRLADRIAIMKN 211 (242)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999998765324 4555577788889999999999999
Q ss_pred CeEEEecChhHHH
Q 000913 401 GQIVYQGPRELVL 413 (1226)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1226)
|++++.|+.+++.
T Consensus 212 G~i~~~~~~~~~~ 224 (242)
T cd03295 212 GEIVQVGTPDEIL 224 (242)
T ss_pred CEEEEecCHHHHH
Confidence 9999999987763
No 215
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.1e-36 Score=387.84 Aligned_cols=258 Identities=25% Similarity=0.392 Sum_probs=198.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.++.+..++|+.++++.+++. .........+.....++|+||++.++.
T Consensus 428 ~~~~~~~~~ri~~il~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~Y~~--------------------------- 475 (694)
T TIGR03375 428 YQQAKTALQSLDELMQLPVER-----PEGTRFLHRPRLQGEIEFRNVSFAYPG--------------------------- 475 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CCCCCCCCCCCccceEEEEEEEEEeCC---------------------------
Confidence 678889999999988876541 000000111112347999999999842
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
...++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 476 -----~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~ 547 (694)
T TIGR03375 476 -----QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQD 547 (694)
T ss_pred -----CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCC
Confidence 1134999999999999999999999999999999999999998 9999999999887654 4789999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+| +.||+|||.++.. ....+.+.++++.. + .+.. +..|++..||
T Consensus 548 ~~lf-~~TI~eNi~~~~~----~~~~~~i~~a~~~~---~------------------------l~~~--i~~lp~gl~T 593 (694)
T TIGR03375 548 PRLF-YGTLRDNIALGAP----YADDEEILRAAELA---G------------------------VTEF--VRRHPDGLDM 593 (694)
T ss_pred hhhh-hhhHHHHHhCCCC----CCCHHHHHHHHHHc---C------------------------hHHH--HHhCcccccc
Confidence 7655 5799999987631 11122222222111 0 0111 2247788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+. .||||||||++|||||+++|++++||||||+||+.++..|.+.|+++. .++|+|++ +|.. ++.+.||+
T Consensus 594 ~i~e~G~-~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~iiI-tHrl-~~~~~~D~ 668 (694)
T TIGR03375 594 QIGERGR-SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVLV-THRT-SLLDLVDR 668 (694)
T ss_pred eecCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEEE-ecCH-HHHHhCCE
Confidence 9998765 699999999999999999999999999999999999999999998764 35566664 4443 56789999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+++++|+++++++
T Consensus 669 iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 669 IIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999865
No 216
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.3e-36 Score=346.21 Aligned_cols=229 Identities=21% Similarity=0.233 Sum_probs=185.6
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|++..++............+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 48899998887532110000000123579999999999999999999999999999999999876 4589999999876
Q ss_pred Chh------hhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 000913 935 KQE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1226)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 1005 (1226)
... .+++.++||+|++ .+++.+||.|++.+...... ...+.++.++.+.++++.++|. ...++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 421 2456799999997 57889999999988644321 1234556677888999999995 355555 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
..|||||||||+||+||+.+|++|+|||||+|||+.++..|+++|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 999999999987 47788999999986
Q ss_pred cEEEEeCCC
Q 000913 1085 GQEIYVGPL 1093 (1226)
Q Consensus 1085 g~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799999985
No 217
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-36 Score=342.19 Aligned_cols=218 Identities=24% Similarity=0.295 Sum_probs=180.4
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++... ...+.+|+|||+++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13641 3 IKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHIT 72 (287)
T ss_pred EEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67888888774210 001459999999999999999999999999999999999876 56899999998753
Q ss_pred h-------hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000913 936 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1226)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1226)
. ...++.+||++|++. .+..+||.||+.|..... ....++..++++++++.++|. +..+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (287)
T PRK13641 73 PETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----PF 144 (287)
T ss_pred cccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----cc
Confidence 2 234567999999963 233579999998865432 233455566789999999997 566665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.||++++|++ |+
T Consensus 145 ~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~ 222 (287)
T PRK13641 145 ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GK 222 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999777999999999987 47889999999986 78
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13641 223 LIKHASP 229 (287)
T ss_pred EEEeCCH
Confidence 9999874
No 218
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.4e-36 Score=377.78 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=194.2
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.+++.+.++|+.++++.+++ ..+... ........+++|+||++.++.
T Consensus 304 ~~~~~~s~~ri~~ll~~~~~-----~~~~~~-~~~~~~~~~i~~~~v~f~y~~--------------------------- 350 (574)
T PRK11160 304 LGQVIASARRINEITEQKPE-----VTFPTT-STAAADQVSLTLNNVSFTYPD--------------------------- 350 (574)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----CCCCcc-cCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 45677788888888776554 111000 011122457999999999742
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
.+.++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|++||.++.+... ++.++||+|+
T Consensus 351 -----~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~ 422 (574)
T PRK11160 351 -----QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQR 422 (574)
T ss_pred -----CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEccc
Confidence 1124899999999999999999999999999999999999998 9999999999887654 4679999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+| +.|++||+.++.. ....+.+.++.+.. ++ +.. .-. ++..||
T Consensus 423 ~~lf-~~ti~~Ni~~~~~----~~~~~~i~~al~~~---~l------------------------~~~--i~~-p~GldT 467 (574)
T PRK11160 423 VHLF-SATLRDNLLLAAP----NASDEALIEVLQQV---GL------------------------EKL--LED-DKGLNA 467 (574)
T ss_pred chhh-cccHHHHhhcCCC----ccCHHHHHHHHHHc---CC------------------------HHH--HcC-ccccCc
Confidence 7655 5799999988642 11122222221111 00 111 123 677899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.||+.+. .||||||||++|||+++++|++|+|||||++||+.++..|.+.|++.. .++|+|++.|++ +....+|+
T Consensus 468 ~vge~g~-~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviiitHr~--~~~~~~d~ 542 (574)
T PRK11160 468 WLGEGGR-QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMITHRL--TGLEQFDR 542 (574)
T ss_pred hhcCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEEecCh--hHHHhCCE
Confidence 9998654 699999999999999999999999999999999999999999998864 356666654443 44567999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|++++.|+++++.+
T Consensus 543 i~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 543 ICVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999998864
No 219
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.8e-36 Score=330.03 Aligned_cols=195 Identities=29% Similarity=0.404 Sum_probs=161.5
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1226)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 45999999999999999999999999999999999999998 9999999998765431 3579999999989
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
++.+||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999998764332100 001123567888999987666544
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEE
Q 000913 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1226)
+.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++++..+ ++||.++|+..++. .+|++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAG-TTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHh-hhcEEEE
Confidence 46999999999999999999999999999999999999999999998865234 44555677777775 9999999
Q ss_pred EcCCeE
Q 000913 398 LSDGQI 403 (1226)
Q Consensus 398 L~~G~i 403 (1226)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 220
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=340.41 Aligned_cols=213 Identities=23% Similarity=0.320 Sum_probs=179.7
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ +++.+|+||||+|++||++||+|||||||||||++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 56788887763 12359999999999999999999999999999999999876 56899999998764
Q ss_pred h----hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 936 Q----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 936 ~----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
. ...++.+||++|++. .+...|+.||+.|..... ..+..+.++.++++++.++|.+..+..+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 234567999999975 356689999998865332 2344455567889999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
|||||++||+||+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++ +.+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999987 35 66999999986 689999
Q ss_pred CCC
Q 000913 1091 GPL 1093 (1226)
Q Consensus 1091 G~~ 1093 (1226)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 975
No 221
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-36 Score=333.36 Aligned_cols=216 Identities=24% Similarity=0.280 Sum_probs=178.8
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1226)
++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67888887763 246999999999999999999999999999999999986521 36899999998
Q ss_pred cCCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc----cccccCCCCC
Q 000913 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL----RQSLVGLPGV 1005 (1226)
Q Consensus 933 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~~g~~~~ 1005 (1226)
++.. ..+++.+||++|++.+++.+||+||+.+....+... ....+..+.++++++.++|.+. .+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLV-KSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhcccc-CCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7532 245567999999998888999999999865332111 1233445668899999998642 3333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999864 899999999987 47788999999986 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 88888874
No 222
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=9.3e-37 Score=346.10 Aligned_cols=256 Identities=27% Similarity=0.386 Sum_probs=203.5
Q ss_pred hhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcC
Q 000913 80 ERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIP 159 (1226)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~ 159 (1226)
.++.+-.|+-+.+.+.++ ..+++.+|-|+..+..|++++-- +
T Consensus 304 ~Ar~s~~Rl~~lL~~~p~--------~~~~m~LP~P~g~L~Ve~l~~~P-P----------------------------- 345 (580)
T COG4618 304 AARQSYKRLNELLAELPA--------AAERMPLPAPQGALSVERLTAAP-P----------------------------- 345 (580)
T ss_pred HHHHHHHHHHHHHHhCcc--------ccCCCCCCCCCceeeEeeeeecC-C-----------------------------
Confidence 344455555555544443 33468888999999999999821 1
Q ss_pred CCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc---ceEEEecCCCC
Q 000913 160 SKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDN 236 (1226)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~---~~~~yv~Q~d~ 236 (1226)
..++++|+|+||.+.+|+-++|+||||||||||.++|.|..+|. +|.|.+||.+++++++. +.+||.||+-.
T Consensus 346 --g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVe 420 (580)
T COG4618 346 --GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVE 420 (580)
T ss_pred --CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccce
Confidence 13356999999999999999999999999999999999999998 99999999999988764 78999999554
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccc
Q 000913 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1226)
+ +..||.|||. |+. .....+.+.|+++....+ + -++.|++.+||.|
T Consensus 421 L-F~GTIaeNIa---Rf~-~~~d~~kIieAA~lAgvH---------------------------e--lIl~lP~GYdT~i 466 (580)
T COG4618 421 L-FDGTIAENIA---RFG-EEADPEKVIEAARLAGVH---------------------------E--LILRLPQGYDTRI 466 (580)
T ss_pred e-cCCcHHHHHH---hcc-ccCCHHHHHHHHHHcChH---------------------------H--HHHhCcCCccCcc
Confidence 4 4579999995 332 112233344444332211 1 1678999999999
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
|+.+. +||||||||+++||||+++|.+++||||-|+||+.....+.+.|.+... .++|+|++ + |++.+...+|+|+
T Consensus 467 G~~G~-~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvvi-a-HRPs~L~~~Dkil 542 (580)
T COG4618 467 GEGGA-TLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVI-A-HRPSALASVDKIL 542 (580)
T ss_pred CCCCC-CCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEE-e-cCHHHHhhcceee
Confidence 98765 6999999999999999999999999999999999999999999988643 45555554 3 4678999999999
Q ss_pred EEcCCeEEEecChhHHHHHH
Q 000913 397 LLSDGQIVYQGPRELVLEFF 416 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~F 416 (1226)
+|++|++-.+|+++|++...
T Consensus 543 vl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 543 VLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred eecCChHHhcCCHHHHHHHh
Confidence 99999999999999998754
No 223
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-36 Score=337.66 Aligned_cols=208 Identities=25% Similarity=0.344 Sum_probs=174.3
Q ss_pred ccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCC
Q 000913 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1226)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d 235 (1226)
..+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3456999999999999999999999999999999999999998 9999999988754321 24699999999
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
.+++.+||+||+.++....+... .+....++.+++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCC
Confidence 88989999999998754322100 00112356678899998777765
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
++ .|||||||||+||+||+.+|++|||||||+|||+.+...+.+.|+++.+..+ ++||.++|+..++.+++|++
T Consensus 158 ~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 PD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQ-KTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEE
Confidence 54 6999999999999999999999999999999999999999999998765334 45555778888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000913 396 ILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1226)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 224
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-36 Score=329.30 Aligned_cols=201 Identities=24% Similarity=0.336 Sum_probs=165.7
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1226)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 45999999999999999999999999999999999999988 9999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
++.+||+||+.|.....+... .+....++.+++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999998654321100 001123567888999987666544
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEE
Q 000913 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1226)
..|||||||||+||++++.+|+++||||||+|||+.++..+.+.|+++.+..+ ++||.++|+..++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQG-TAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCC-CEEEEEeCCHHHHHh-hCEEEE
Confidence 46999999999999999999999999999999999999999999998764334 455556777777665 589999
Q ss_pred EcCCeEEEecCh
Q 000913 398 LSDGQIVYQGPR 409 (1226)
Q Consensus 398 L~~G~iv~~G~~ 409 (1226)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 225
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-36 Score=343.73 Aligned_cols=217 Identities=22% Similarity=0.414 Sum_probs=173.4
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-------------------Ccc
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------------------VPQ 225 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~-------------------~~~ 225 (1226)
.++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999998 99999999886532 123
Q ss_pred ceEEEecCCCC-CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHH
Q 000913 226 RTAAYISQHDN-HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1226)
Q Consensus 226 ~~~~yv~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1226)
+.++||+|++. .+...||+||+.|+....+.. . .+....++.+++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 67999999862 344569999999875322110 0 011124567788
Q ss_pred HcCCc-ccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEec
Q 000913 305 VLGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQ 383 (1226)
Q Consensus 305 ~lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q 383 (1226)
.+||+ ...+. .+..|||||||||+|||+|+.+|++|||||||+|||+.++..+++.|+++.. . +++|+.++|
T Consensus 162 ~~gL~~~~~~~-----~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLER-----SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITH 234 (320)
T ss_pred HcCCChhHhcC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEec
Confidence 99996 34443 3457999999999999999999999999999999999999999999998754 3 445556788
Q ss_pred ChhhHHhhcCcEEEEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000913 384 PAPETYDLFDDIILLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1226)
Q Consensus 384 ~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~ 425 (1226)
+..++.+++|+|++|++|++++.|+++++.. .++..|+.+|.
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 8888999999999999999999999987742 34455655544
No 226
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.6e-36 Score=351.19 Aligned_cols=208 Identities=26% Similarity=0.429 Sum_probs=174.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1226)
++|+|+||.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|.++..... ++.++||+|+..+++.+|
T Consensus 17 ~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~t 93 (402)
T PRK09536 17 TVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFD 93 (402)
T ss_pred EEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 467999999998889999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+||+.++...... . +.. ...+....++++++.+||.+..++.+ +
T Consensus 94 v~e~v~~~~~~~~~--~---------------~~~-------------~~~~~~~~v~~~le~vgl~~~~~~~~-----~ 138 (402)
T PRK09536 94 VRQVVEMGRTPHRS--R---------------FDT-------------WTETDRAAVERAMERTGVAQFADRPV-----T 138 (402)
T ss_pred HHHHHHhccchhcc--c---------------ccC-------------CCHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 99999986421100 0 000 00011235678899999988777654 5
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||.|||||+++|++|||||||+|||+.++..+++.|+++++ .+ ++|+.++|+..++.+++|++++|++|+
T Consensus 139 ~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G~ 216 (402)
T PRK09536 139 SLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADGR 216 (402)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999875 44 456667889999999999999999999
Q ss_pred EEEecChhHHH
Q 000913 403 IVYQGPRELVL 413 (1226)
Q Consensus 403 iv~~G~~~~~~ 413 (1226)
+++.|++++++
T Consensus 217 iv~~G~~~ev~ 227 (402)
T PRK09536 217 VRAAGPPADVL 227 (402)
T ss_pred EEEecCHHHHh
Confidence 99999998864
No 227
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-36 Score=339.29 Aligned_cols=214 Identities=25% Similarity=0.366 Sum_probs=181.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++. .+.+|+||||++++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 678888887731 2358999999999999999999999999999999999876 56899999998754
Q ss_pred h---hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 936 Q---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
. ..+++.+|||+|++. .+...||.||+.+..... ..+.+..++.++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 2 235567899999974 334579999998765322 2344455567899999999988777763 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999765 899999999987 57789999999986 689999
Q ss_pred CCC
Q 000913 1091 GPL 1093 (1226)
Q Consensus 1091 G~~ 1093 (1226)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 975
No 228
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=335.88 Aligned_cols=213 Identities=25% Similarity=0.353 Sum_probs=179.3
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 67788887763 2469999999999999999999999999999999999866 56899999998653
Q ss_pred h---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000913 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1226)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGq 1012 (1226)
. ..+++.++|++|++.+++.+||+|++.+...... ...++.++.++++++.+++.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 2344679999999888788999999988543211 122333456889999999988777664 5799999
Q ss_pred HHHHHHHHHHh------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1013 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1013 rqrl~ia~~L~------~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
||||+||++|+ .+|++|+|||||+|||+.++..+++.|+++. ++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 67999999999986 47789999999986 6
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 88888875
No 229
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.1e-36 Score=332.39 Aligned_cols=219 Identities=23% Similarity=0.263 Sum_probs=176.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35678877763 24699999999999999999999999999999999998411146899999998754
Q ss_pred h---hhh-cceeeEeecCCCCCCCCCHHHHHHHHHHhhcC--C--CCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000913 936 Q---ETF-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLS--P--EVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1226)
Q Consensus 936 ~---~~~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~--~--~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1226)
. ... +..++|++|++.+++.+|++|++.+....... . ..+..+..+.+.++++.++|. .+.+..++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 2 122 23489999999999999999999876432211 0 112233446688999999997 45554432 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCeEEEEecCc
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1085 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~-~D~v~ll~~Gg 1085 (1226)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ .+.+. +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999877999999999986 46666 799999985 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 89998874
No 230
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-36 Score=342.23 Aligned_cols=205 Identities=26% Similarity=0.374 Sum_probs=169.1
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC----------------------
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF---------------------- 222 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~---------------------- 222 (1226)
..+|+|||+.|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999998 99999998764210
Q ss_pred -----CccceEEEecCCC-CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhH
Q 000913 223 -----VPQRTAAYISQHD-NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEAN 296 (1226)
Q Consensus 223 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 296 (1226)
..++.+|||+|++ ..++..||+|||.|+....+... ++..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 1135799999985 34556899999998764332110 0112
Q ss_pred HHHHHHHHHcCCc-ccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCC
Q 000913 297 VITDYYLKVLGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSG 375 (1226)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~ 375 (1226)
..++.+++.+||+ +..+.. +..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.. . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 2456788999996 455544 457999999999999999999999999999999999999999999998763 3 4
Q ss_pred eEEEEEecChhhHHhhcCcEEEEcCCeEEEecChhHHH
Q 000913 376 TAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 376 t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
++||.++|+..++.+++|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 45666888999999999999999999999999998864
No 231
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.2e-37 Score=311.96 Aligned_cols=210 Identities=22% Similarity=0.379 Sum_probs=180.8
Q ss_pred ccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCCCCC
Q 000913 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1226)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1226)
+++++++|||+.+++||+++|+|||||||||.+.++.|+..|+ +|+|.+||.+++.+... .-+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4566999999999999999999999999999999999999999 99999999999887643 4589999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
-.|||+|||....+.+.... ...+.+...+.+|+.|++.++++..-
T Consensus 92 r~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr~~~a-- 137 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLRDSKA-- 137 (243)
T ss_pred hcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHhcCcc--
Confidence 99999999987665432110 00122345678999999999998653
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
-.||||||+|+.|||||+.+|+.++||||++|+||.+..+|.+.++.+.. . +.-|+..-|...|+...+||.+++
T Consensus 138 ---~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-r-giGvLITDHNVREtL~i~dRaYIi 212 (243)
T COG1137 138 ---YSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-R-GIGVLITDHNVRETLDICDRAYII 212 (243)
T ss_pred ---cccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-C-CceEEEccccHHHHHhhhheEEEE
Confidence 35999999999999999999999999999999999999999999998865 3 444555678899999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000913 399 SDGQIVYQGPRELVLE 414 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1226)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999998864
No 232
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-36 Score=334.16 Aligned_cols=215 Identities=21% Similarity=0.237 Sum_probs=177.1
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
.++++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999988774 235899999999999999999999999999999999986531 2479999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC----cccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++ +||+||+.|....+. .......++.+.++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234667999999988774 899999998654321 112333456688889998874 233433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999996 4799999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 6 789988874
No 233
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-36 Score=335.96 Aligned_cols=217 Identities=22% Similarity=0.267 Sum_probs=180.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 478889988763 2469999999999999999999999999999999999876 5689999999876
Q ss_pred Chh---h-hcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC----------C--CCCHHHHHHHHHHHHHHcCCCccccc
Q 000913 935 KQE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLS----------P--EVDSETRKMFIDEVMELVELNPLRQS 998 (1226)
Q Consensus 935 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~----------~--~~~~~~~~~~v~~~l~~l~l~~~~~~ 998 (1226)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.+.++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233589999999999999999999986432110 0 00112234567888999999877776
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCe
Q 000913 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1077 (1226)
Q Consensus 999 ~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~ 1077 (1226)
.+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 53 579999999999999999999999999999999999999999999999765 899999999987 57788999
Q ss_pred EEEEecCcEEEEeCCC
Q 000913 1078 LFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1078 v~ll~~Gg~~~y~G~~ 1093 (1226)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999986 789998875
No 234
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-36 Score=333.82 Aligned_cols=217 Identities=24% Similarity=0.265 Sum_probs=179.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 377889988774 246999999999999999999999999999999999986532 3589999999
Q ss_pred ccCC-----hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ....++.++.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8763 123456799999999999999999999886543211 1123344456888999999853 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 699999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 6 789998874
No 235
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=8.3e-36 Score=343.85 Aligned_cols=208 Identities=23% Similarity=0.246 Sum_probs=173.9
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCC--C
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d--~ 236 (1226)
..+|+|||+.|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 56999999999999999999999999999999999999987 9999999998865432 35799999986 5
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000913 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1226)
+++.+||.||+.+..+....+.. ..+....+..+++.+||. ...+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~~--------------------------------~~~~~~~~~~~l~~vgl~~~~~~-- 156 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKLS--------------------------------RQEVKDRVKAMMLKVGLLPNLIN-- 156 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCCC--------------------------------HHHHHHHHHHHHHHcCCChHHhc--
Confidence 88899999999987543210000 001123456788999994 3444
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
..+..|||||||||+||+||+.+|++||+||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 157 ---~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 157 ---RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 445679999999999999999999999999999999999999999999988653 3456666899999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000913 396 ILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1226)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998874
No 236
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.3e-36 Score=376.04 Aligned_cols=253 Identities=19% Similarity=0.226 Sum_probs=195.3
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.++.....+|+.++++.+++. . +....+....+++|+|+++.++.
T Consensus 308 ~~~~~~s~~ri~~~l~~~~~~------~--~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 352 (592)
T PRK10790 308 LQQAVVAGERVFELMDGPRQQ------Y--GNDDRPLQSGRIDIDNVSFAYRD--------------------------- 352 (592)
T ss_pred HHHHHHHHHHHHHHhcCCCcc------C--CCCccCCCCCeEEEEEEEEEeCC---------------------------
Confidence 467778888888877655431 0 00011112346999999998731
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
+ .++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++..+ ++.++||+|+
T Consensus 353 ---~---~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~ 423 (592)
T PRK10790 353 ---D---NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQD 423 (592)
T ss_pred ---C---CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccC
Confidence 1 23999999999999999999999999999999999999998 9999999999887654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+|+ .|++|||.++.. ...+.+.++++. .+ .++.++ .|++..||
T Consensus 424 ~~lF~-~Ti~~NI~~~~~-----~~d~~i~~a~~~---~g------------------------l~~~i~--~lp~Gldt 468 (592)
T PRK10790 424 PVVLA-DTFLANVTLGRD-----ISEEQVWQALET---VQ------------------------LAELAR--SLPDGLYT 468 (592)
T ss_pred Ccccc-chHHHHHHhCCC-----CCHHHHHHHHHH---cC------------------------cHHHHH--hccccccc
Confidence 87666 599999998631 111222222211 11 011122 36778899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+. .||||||||++|||||+++|+|++||||||+||+.++..|.+.|++.. .++|+|++.|++ +....+|+
T Consensus 469 ~i~e~g~-~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIivtHr~--~~l~~~D~ 543 (592)
T PRK10790 469 PLGEQGN-NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVVIAHRL--STIVEADT 543 (592)
T ss_pred cccCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--HHHHhCCE
Confidence 9998654 699999999999999999999999999999999999999999998864 346666654443 66778999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+++..|+++++.+
T Consensus 544 ii~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 544 ILVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred EEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999864
No 237
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.3e-36 Score=388.13 Aligned_cols=261 Identities=22% Similarity=0.273 Sum_probs=196.6
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCC-CCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI-DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1226)
.++....++|+.++++.+++.-......+...... +.....++|+||++.++.
T Consensus 436 ~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~-------------------------- 489 (710)
T TIGR03796 436 LQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSP-------------------------- 489 (710)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCC--------------------------
Confidence 56788889999988877655100000000000000 112357999999999842
Q ss_pred hcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecC
Q 000913 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1226)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q 233 (1226)
..+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||.+++++.. ++.++||+|
T Consensus 490 ------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q 560 (710)
T TIGR03796 490 ------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQ 560 (710)
T ss_pred ------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEec
Confidence 1134999999999999999999999999999999999999998 9999999999877654 578999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000913 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1226)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1226)
++.+| +.|++|||.++. +....+.+.++++.. + .+.. +..|+...|
T Consensus 561 ~~~lf-~gTi~eNi~l~~----~~~~~~~i~~al~~~---~------------------------l~~~--i~~lp~gl~ 606 (710)
T TIGR03796 561 DIFLF-EGTVRDNLTLWD----PTIPDADLVRACKDA---A------------------------IHDV--ITSRPGGYD 606 (710)
T ss_pred CChhh-hccHHHHhhCCC----CCCCHHHHHHHHHHh---C------------------------CHHH--HHhCcCccc
Confidence 77655 679999998752 111222222222211 1 0111 224677889
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcC
Q 000913 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1226)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1226)
|.+|+.+ .+||||||||++|||||+++|++|+||||||+||+.++..|.+.|++ .++|+|+ ++|. .++...+|
T Consensus 607 t~i~e~G-~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHr-l~~i~~~D 679 (710)
T TIGR03796 607 AELAEGG-ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHR-LSTIRDCD 679 (710)
T ss_pred ceeccCC-CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecC-HHHHHhCC
Confidence 9999876 47999999999999999999999999999999999999999999975 3556665 4444 35667799
Q ss_pred cEEEEcCCeEEEecChhHHHH
Q 000913 394 DIILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1226)
+|++|++|+++++|+++++++
T Consensus 680 ~Iivl~~G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 680 EIIVLERGKVVQRGTHEELWA 700 (710)
T ss_pred EEEEEeCCEEEEecCHHHHHH
Confidence 999999999999999999875
No 238
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=379.09 Aligned_cols=257 Identities=22% Similarity=0.360 Sum_probs=193.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.++.+...+|+.++.+.+++. ..+....+.+..+|+++||++.++.
T Consensus 308 ~~~~~~~~~ri~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 353 (582)
T PRK11176 308 FQRGMAACQTLFAILDLEQEK-------DEGKRVIERAKGDIEFRNVTFTYPG--------------------------- 353 (582)
T ss_pred HHHHHHHHHHHHHHhcCCCcC-------CCCCcCCCCCCCeEEEEEEEEecCC---------------------------
Confidence 455666777777766544330 0011111222346999999998742
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
..+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 354 -----~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 425 (582)
T PRK11176 354 -----KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQN 425 (582)
T ss_pred -----CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccC
Confidence 1134999999999999999999999999999999999999998 9999999999877654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+| +.|++|||.++..- ....+.+.++++.. + .+..+ -.|++..||
T Consensus 426 ~~lf-~~Ti~~Ni~~~~~~---~~~~~~i~~al~~~---~------------------------l~~~i--~~lp~Gldt 472 (582)
T PRK11176 426 VHLF-NDTIANNIAYARTE---QYSREQIEEAARMA---Y------------------------AMDFI--NKMDNGLDT 472 (582)
T ss_pred ceee-cchHHHHHhcCCCC---CCCHHHHHHHHHHh---C------------------------cHHHH--HhcccccCc
Confidence 7666 57999999876310 01122222222111 0 11111 236788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+ +.||||||||++|||||+++|++++||||||+||+.++..+++.|++.. .++|+|++ +|. .+..+.||+
T Consensus 473 ~ig~~g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~V-tHr-~~~~~~~D~ 547 (582)
T PRK11176 473 VIGENG-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLVI-AHR-LSTIEKADE 547 (582)
T ss_pred eeCCCC-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEE-ecc-hHHHHhCCE
Confidence 999875 4699999999999999999999999999999999999999999998753 34566554 444 367788999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+++++|+++++.+
T Consensus 548 Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 548 ILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred EEEEECCEEEEeCCHHHHHh
Confidence 99999999999999998864
No 239
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.2e-36 Score=334.19 Aligned_cols=212 Identities=27% Similarity=0.379 Sum_probs=170.3
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1226)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 16 QALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 4999999999999999999999999999999999999988 999999998875432 2457999999988899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.++..... ... .... .. ...+....++.+++.+||.+..+..
T Consensus 93 ~~tv~~~l~~~~~~~~--~~~---~~~~------~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~---- 142 (243)
T TIGR02315 93 RLTVLENVLHGRLGYK--PTW---RSLL------GR---------------FSEEDKERALSALERVGLADKAYQR---- 142 (243)
T ss_pred cccHHHHHhhcccccc--cch---hhhh------cc---------------ccHHHHHHHHHHHHHcCcHhhhcCC----
Confidence 9999999987532110 000 0000 00 0001123456778899998766654
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
+..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.+.. +++|+.++|+..++.+++|++++|+
T Consensus 143 -~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~l~ 220 (243)
T TIGR02315 143 -ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVGLK 220 (243)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEE
Confidence 45699999999999999999999999999999999999999999999876533 4455557788888999999999999
Q ss_pred CCeEEEecChhHH
Q 000913 400 DGQIVYQGPRELV 412 (1226)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1226)
+|++++.|+++++
T Consensus 221 ~G~i~~~~~~~~~ 233 (243)
T TIGR02315 221 AGEIVFDGAPSEL 233 (243)
T ss_pred CCEEEecCCHHHh
Confidence 9999999998765
No 240
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.3e-36 Score=387.81 Aligned_cols=257 Identities=24% Similarity=0.310 Sum_probs=197.1
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.++.+..++|+.++++.++|. .+..+....+....+|+|+||++.++.
T Consensus 438 ~~~~~~~~~ri~~~l~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~y~~--------------------------- 485 (708)
T TIGR01193 438 LQAARVANNRLNEVYLVDSEF-----INKKKRTELNNLNGDIVINDVSYSYGY--------------------------- 485 (708)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cccccccCCCCCCCcEEEEEEEEEcCC---------------------------
Confidence 567888889998888766551 110000111223457999999999831
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
.+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||.++++... ++.++||+|+
T Consensus 486 ------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 556 (708)
T TIGR01193 486 ------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQE 556 (708)
T ss_pred ------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecC
Confidence 124899999999999999999999999999999999999998 9999999999877654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+| +.||+|||.++.+. ....+.+.++++... .++. +..|+...||
T Consensus 557 ~~lf-~gTI~eNi~l~~~~---~~~~~~i~~a~~~a~---------------------------l~~~--i~~lp~gldt 603 (708)
T TIGR01193 557 PYIF-SGSILENLLLGAKE---NVSQDEIWAACEIAE---------------------------IKDD--IENMPLGYQT 603 (708)
T ss_pred ceeh-hHHHHHHHhccCCC---CCCHHHHHHHHHHhC---------------------------CHHH--HHhcccccCc
Confidence 7655 56999999986321 111222222222111 0111 2247788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.||+.+ .+||||||||++||||++++|++|+||||||+||+.++..+.+.|+++ .++|+|+ ++|.. ++.+.+|+
T Consensus 604 ~i~e~G-~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~Ii-itHr~-~~~~~~D~ 677 (708)
T TIGR01193 604 ELSEEG-SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIF-VAHRL-SVAKQSDK 677 (708)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEE-Eecch-HHHHcCCE
Confidence 999865 469999999999999999999999999999999999999999999863 3456555 44443 56788999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|++++.|+++++.+
T Consensus 678 i~~l~~G~i~~~G~~~~L~~ 697 (708)
T TIGR01193 678 IIVLDHGKIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999864
No 241
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.3e-35 Score=328.63 Aligned_cols=205 Identities=26% Similarity=0.367 Sum_probs=169.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc--cceEEEecCCCCCCCCCCH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP--QRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~--~~~~~yv~Q~d~~~~~lTV 243 (1226)
++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+||
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 15 RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 4999999999999999999999999999999999999998 9999999988754322 2579999999888899999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+||+.+.....+... .+....++.+++.+||+...++.++ .
T Consensus 92 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 132 (236)
T TIGR03864 92 RQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR-----E 132 (236)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----h
Confidence 999987653321100 0011234667888999877666554 6
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++++..+.| |+.++|+..++. .+|+|++|++|++
T Consensus 133 LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~t-iii~sH~~~~~~-~~d~i~~l~~G~i 210 (236)
T TIGR03864 133 LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLS-VLWATHLVDEIE-ADDRLVVLHRGRV 210 (236)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCE-EEEEecChhhHh-hCCEEEEEeCCeE
Confidence 99999999999999999999999999999999999999999999876433444 555677777775 5999999999999
Q ss_pred EEecChhHHHH
Q 000913 404 VYQGPRELVLE 414 (1226)
Q Consensus 404 v~~G~~~~~~~ 414 (1226)
++.|+.+++.+
T Consensus 211 ~~~~~~~~~~~ 221 (236)
T TIGR03864 211 LADGAAAELRG 221 (236)
T ss_pred EEeCCHHHHHH
Confidence 99999887653
No 242
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-36 Score=339.21 Aligned_cols=206 Identities=21% Similarity=0.315 Sum_probs=169.3
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCC-C
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHD-N 236 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~-------~~~~~~yv~Q~d-~ 236 (1226)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 34999999999999999999999999999999999999998 999999999875421 246799999985 2
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000913 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1226)
.+...||+||+.|+....+... .+....++.+++.+||. ...++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3334699999998753321100 01122456788899996 455544
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 -----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred -----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 4579999999999999999999999999999999999999999999987643 3455666788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000913 396 ILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1226)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999988764
No 243
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.1e-36 Score=332.12 Aligned_cols=215 Identities=25% Similarity=0.315 Sum_probs=178.8
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ .+.+|+|+||++++|++++|+|+|||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56788877763 2469999999999999999999999999999999999866 46899999998754
Q ss_pred hh----hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC--C---CCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS--P---EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~--~---~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.. ..++.++|++|++.+++.+||+||+.+....... . ....+..+++++++++.+++.+..+..+ .
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 21 1234699999999999999999999886432100 0 0112334567889999999988776653 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999875 799999999987 47788999999986 68
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 8888874
No 244
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=6.6e-36 Score=324.62 Aligned_cols=194 Identities=26% Similarity=0.390 Sum_probs=164.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-CccceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-VPQRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~-~~~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.+||+
T Consensus 14 ~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 14 RVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred EeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 4999999999999999999999999999999999999988 99999999876542 1235799999998889999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.+.....+. ....++.+++.+||++..++.+ ..|
T Consensus 91 e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 127 (208)
T cd03268 91 ENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV-----KGF 127 (208)
T ss_pred HHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH-----hhC
Confidence 999886532210 0112456788899987666554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.+ .+. +|+.++|+..++.+++|++++|++|+++
T Consensus 128 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tii~~tH~~~~~~~~~d~v~~l~~g~i~ 205 (208)
T cd03268 128 SLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGI-TVLISSHLLSEIQKVADRIGIINKGKLI 205 (208)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCC-EEEEEcCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998764 344 4555778888999999999999999998
Q ss_pred Eec
Q 000913 405 YQG 407 (1226)
Q Consensus 405 ~~G 407 (1226)
+.|
T Consensus 206 ~~g 208 (208)
T cd03268 206 EEG 208 (208)
T ss_pred ecC
Confidence 765
No 245
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=333.78 Aligned_cols=214 Identities=24% Similarity=0.292 Sum_probs=177.6
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1226)
.++++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588899988763 24699999999999999999999999999999999998652 13589999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++ +|++||+.|....+ ..+.++.++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 234567999999988877 89999999865432 1233444556888999998843 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|+++.+ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 899999999986 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 6 789999874
No 246
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-36 Score=326.42 Aligned_cols=208 Identities=25% Similarity=0.339 Sum_probs=172.0
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
.++|+++.++ .+. .|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~ 64 (211)
T cd03298 2 RLDKIRFSYG-------------EQP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTA 64 (211)
T ss_pred EEEeEEEEeC-------------CEe--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCc
Confidence 4677777663 122 29999999999999999999999999999999876 568999999987643
Q ss_pred h-hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000913 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1226)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqr 1015 (1226)
. ..++.++|++|++.+++.+||+||+.+....+. .. .++.++.++++++.+++.+..+..+ ..||||||||
T Consensus 65 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (211)
T cd03298 65 APPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQR 136 (211)
T ss_pred CCHhHccEEEEecccccCCCCcHHHHHhccccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHH
Confidence 1 234679999999998889999999987543211 11 1233456889999999988777663 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
++||++|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 v~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 137 VALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999875 4899999999986 47788999999986 6776543
No 247
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=7.2e-36 Score=326.79 Aligned_cols=198 Identities=30% Similarity=0.444 Sum_probs=166.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 5999999999999999999999999999999999999998 999999998875421 23679999999988999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+||+.+.....+... .+....++.+++.+||++..+..+ +.
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 999987654322100 001224567889999987766554 46
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+ .+||.++|+..++..++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LG-KCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 34 4555577888899999999999999999
Q ss_pred EEec
Q 000913 404 VYQG 407 (1226)
Q Consensus 404 v~~G 407 (1226)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 248
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-36 Score=339.04 Aligned_cols=215 Identities=26% Similarity=0.299 Sum_probs=181.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++. ..+.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3788999887742 12359999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ...++.+||++|++. .++..||.||+.+..... ..+.++.++++.++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 234567999999973 566789999998865433 1234455667899999999988877764 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||++||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|++.. + +.+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 8999999999863 5 46999999986 68999
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9975
No 249
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-36 Score=334.70 Aligned_cols=216 Identities=25% Similarity=0.344 Sum_probs=180.3
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+||++++|++++|+|+|||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 66788887763 2469999999999999999999999999999999999865 46899999998653
Q ss_pred h---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHh--hcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWL--RLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l--r~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
. ..+++.++|++|+..+++.+|+.|++.++... .... ...+..++.++++++.+++.+..++. +..|||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 141 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWG-RLSAEDNARVNQAMEQTRINHLADRR-----LTDLSG 141 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhcc-CCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCH
Confidence 2 23455699999998888889999999875311 1111 11123345678899999998777766 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (255)
T PRK11231 142 GQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQ 219 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEE
Confidence 9999999999999999999999999999999999999999998777999999999987 58889999999986 688888
Q ss_pred CCCC
Q 000913 1091 GPLG 1094 (1226)
Q Consensus 1091 G~~~ 1094 (1226)
|+..
T Consensus 220 ~~~~ 223 (255)
T PRK11231 220 GTPE 223 (255)
T ss_pred cCHH
Confidence 8753
No 250
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-36 Score=322.02 Aligned_cols=195 Identities=41% Similarity=0.733 Sum_probs=166.9
Q ss_pred eEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHH
Q 000913 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1226)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1226)
.+.|+||++.++.. +..+.+|+|+|+.+++|++++|+|||||||||||++
T Consensus 3 ~~~~~~~~~~~~~~------------------------------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~ 52 (202)
T cd03233 3 TLSWRNISFTTGKG------------------------------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKA 52 (202)
T ss_pred eEEEEccEEEeccC------------------------------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHH
Confidence 47899999998641 133569999999999999999999999999999999
Q ss_pred HhcCCC---CCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHh
Q 000913 198 LAGKLD---PTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKA 272 (1226)
Q Consensus 198 L~G~~~---~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~ 272 (1226)
|+|.++ |+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++.+..
T Consensus 53 l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~------------------ 111 (202)
T cd03233 53 LANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK------------------ 111 (202)
T ss_pred hcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc------------------
Confidence 999998 66 999999999876432 2467999999999999999999998754210
Q ss_pred cCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCC
Q 000913 273 AGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEIST 352 (1226)
Q Consensus 273 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEpts 352 (1226)
.+..+..||||||||++||++|+.+|+++||||||+
T Consensus 112 --------------------------------------------~~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~ 147 (202)
T cd03233 112 --------------------------------------------GNEFVRGISGGERKRVSIAEALVSRASVLCWDNSTR 147 (202)
T ss_pred --------------------------------------------cccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCc
Confidence 112334699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEec
Q 000913 353 GLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1226)
Q Consensus 353 gLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1226)
|||+.++..+.+.|+++....+.++|+++||+..++.+.+|++++|++|++++.|
T Consensus 148 ~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 148 GLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999865335677887888888999999999999999998765
No 251
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.4e-35 Score=342.21 Aligned_cols=213 Identities=21% Similarity=0.244 Sum_probs=175.5
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCC--
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD-- 235 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d-- 235 (1226)
..+|+||||+|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 459999999999999999999999999999999999998742238999999998865432 14799999987
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
.+.+.+||.+++.+......... ..+....+..+|+.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~---------------------------------~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMS---------------------------------KAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHcCCCChHHH-
Confidence 68899999999987653321000 00112345667889999754332
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
+ ++.+.+|||||||||+||+||+.+|++||+||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 2 3567789999999999999999999999999999999999999999999998653 3556677889999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000913 396 ILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1226)
++|++|+|++.|+.+++.
T Consensus 233 ~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999999875
No 252
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.7e-36 Score=385.24 Aligned_cols=256 Identities=22% Similarity=0.337 Sum_probs=191.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.++.....+|+.+.++.+++. .+. .....+.....|+|+||++.++.
T Consensus 444 ~~~~~~a~~ri~~~l~~~~~~-----~~~-~~~~~~~~~~~I~~~nVsf~Y~~--------------------------- 490 (711)
T TIGR00958 444 MMQAVGASEKVFEYLDRKPNI-----PLT-GTLAPLNLEGLIEFQDVSFSYPN--------------------------- 490 (711)
T ss_pred HHHHHHHHHHHHHHhCCCCCC-----CCC-CCCCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 567778888888887765441 000 00000112346999999999842
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
+ +++++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|++||+++++... ++.++||+|+
T Consensus 491 ---~-~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 563 (711)
T TIGR00958 491 ---R-PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQE 563 (711)
T ss_pred ---C-CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecC
Confidence 1 1235999999999999999999999999999999999999998 9999999999877654 4789999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+| +.||||||.++..- ...+.+.++++.. ++ +..+ -.|++..||
T Consensus 564 ~~lF-~gTIreNI~~g~~~----~~~e~i~~al~~a---~l------------------------~~~i--~~lp~GldT 609 (711)
T TIGR00958 564 PVLF-SGSVRENIAYGLTD----TPDEEIMAAAKAA---NA------------------------HDFI--MEFPNGYDT 609 (711)
T ss_pred cccc-ccCHHHHHhcCCCC----CCHHHHHHHHHHc---CC------------------------HHHH--HhCCCccCC
Confidence 7555 57999999986421 1112222222111 10 1111 236778899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+. .||||||||++||||++++|+|++||||||+||+.++..|.+ ... ..++|+|+ ++|.. ++.+.+|+
T Consensus 610 ~ige~G~-~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIi-ItHrl-~~i~~aD~ 682 (711)
T TIGR00958 610 EVGEKGS-QLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLL-IAHRL-STVERADQ 682 (711)
T ss_pred cccCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEE-EeccH-HHHHhCCE
Confidence 9998654 699999999999999999999999999999999999999988 221 23455555 55543 56788999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+|+++|+++++.+
T Consensus 683 IivL~~G~ive~Gt~~eL~~ 702 (711)
T TIGR00958 683 ILVLKKGSVVEMGTHKQLME 702 (711)
T ss_pred EEEEECCEEEEeeCHHHHHh
Confidence 99999999999999999864
No 253
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-35 Score=329.52 Aligned_cols=204 Identities=20% Similarity=0.343 Sum_probs=170.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-----ccceEEEecCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHIGE 240 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~~~~ 240 (1226)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 15 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 15 QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 4999999999999999999999999999999999999988 999999999875421 13579999999888899
Q ss_pred CCHHHHHHHHhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
+||+||+.|+.. ..+... .+....++++++.+||+...+..+
T Consensus 92 ~tv~~~l~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 134 (240)
T PRK09493 92 LTALENVMFGPLRVRGASK----------------------------------EEAEKQARELLAKVGLAERAHHYP--- 134 (240)
T ss_pred CcHHHHHHhHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChHHHhcCh---
Confidence 999999988642 111000 001123567888999987666544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
+.|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++.. .+ ++||.++|+..++.+++|++++|+
T Consensus 135 --~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~ 210 (240)
T PRK09493 135 --SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EG-MTMVIVTHEIGFAEKVASRLIFID 210 (240)
T ss_pred --hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 56999999999999999999999999999999999999999999998754 34 455567788889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (240)
T PRK09493 211 KGRIAEDGDPQVLI 224 (240)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988764
No 254
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-36 Score=337.43 Aligned_cols=213 Identities=25% Similarity=0.372 Sum_probs=178.2
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+|+++++|++++|+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 56788887763 2358999999999999999999999999999999999876 56899999998753
Q ss_pred h-----hhhcceeeEeecCCCC-CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 Q-----ETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
. ...++.++|++|++.. ....|+.||+.+....+ ....++..+.++++++.+++.+..++. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 2345679999999753 34568999998764332 123344456688999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 47788999999986 78999
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 9874
No 255
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=336.43 Aligned_cols=215 Identities=27% Similarity=0.400 Sum_probs=174.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCC-CCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD-NHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d-~~~~~l 241 (1226)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|+++|+++..... ++.++|++|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 4999999999999999999999999999999999999998 9999999998765432 35799999986 367788
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+|||.|+....+... .+....++++++.+||++..++.+
T Consensus 98 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13635 98 TVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREP----- 138 (279)
T ss_pred cHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----
Confidence 99999998754321100 011224577888999987776654
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
..|||||||||+||++|+.+|++|||||||+|||+.++..+++.|+++.... +++|+.++|+..++. .+|+|++|++|
T Consensus 139 ~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~-~~tilivsH~~~~~~-~~d~i~~l~~G 216 (279)
T PRK13635 139 HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQK-GITVLSITHDLDEAA-QADRVIVMNKG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHH-cCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999886532 444555667777775 59999999999
Q ss_pred eEEEecChhHHHH---HHHhcCCCCC
Q 000913 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1226)
Q Consensus 402 ~iv~~G~~~~~~~---~F~~~Gf~cp 424 (1226)
++++.|+.+++.. .+...|+.+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 217 EILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred EEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 9999999987753 3444455443
No 256
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-36 Score=307.42 Aligned_cols=216 Identities=27% Similarity=0.386 Sum_probs=183.5
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
|+.+|++|++. .+.+|++||++++|||++||+|||||||||||++|+|... +..|++.++|.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 46688998874 4679999999999999999999999999999999999876 45899999999875
Q ss_pred h---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000913 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1226)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGq 1012 (1226)
. ....+.-+.+||+..+....||+|-+.++..-.... -...+..+.++++|+..++.++..+.. ..|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~g-~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRSG-REPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcccccccC-CCchhhHHHHHHHHHHcChhhhhccch-----hhcCchH
Confidence 4 345677799999998877789999999975332111 112244456789999999999887763 5799999
Q ss_pred HHHHHHHHHHhhC------CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1013 RKRLTIAVELVAN------PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1013 rqrl~ia~~L~~~------p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
||||.+||.|+.- +++||||||||.||...+..++++.|+++++|..|+|+-||.+. ...++|||++|++ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 9999999999753 45899999999999999999999999999999999999999986 7789999999986 79
Q ss_pred EEEeCCCC
Q 000913 1087 EIYVGPLG 1094 (1226)
Q Consensus 1087 ~~y~G~~~ 1094 (1226)
++..|++.
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 99999863
No 257
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.6e-36 Score=405.64 Aligned_cols=263 Identities=21% Similarity=0.287 Sum_probs=200.7
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCC-----CCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHH
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGID-----LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDIL 152 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 152 (1226)
.+.+++..+|+.++++..++ +..+ +.-+.+ ....+|+|+||+|.|+.
T Consensus 1126 ~~~a~~a~~ri~~ll~~~~~-----~~~~-~~~~~~~~~~~~~~g~I~f~nVsF~Y~~---------------------- 1177 (1466)
T PTZ00265 1126 SENAKLSFEKYYPLIIRKSN-----IDVR-DNGGIRIKNKNDIKGKIEIMDVNFRYIS---------------------- 1177 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCCc-----CCCC-CCcccccccCCCCCceEEEEEEEEECCC----------------------
Confidence 56788888898888876543 1000 011111 12357999999999842
Q ss_pred hHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC---------------------------
Q 000913 153 NYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--------------------------- 205 (1226)
Q Consensus 153 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------- 205 (1226)
+ ...+||+|+|++|+||+.+||+||||||||||+++|.|+++|+
T Consensus 1178 --------~-~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 (1466)
T PTZ00265 1178 --------R-PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQ 1248 (1466)
T ss_pred --------C-CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence 1 1235999999999999999999999999999999999999982
Q ss_pred ------------------------CCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCc
Q 000913 206 ------------------------LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 258 (1226)
Q Consensus 206 ------------------------~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~ 258 (1226)
...+|+|++||+++.++.. ++.++||+|++.+| +.||+|||.|+.. ..
T Consensus 1249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~----~a 1323 (1466)
T PTZ00265 1249 NVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE----DA 1323 (1466)
T ss_pred ccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC----CC
Confidence 0138999999999987764 57899999987655 6899999999742 22
Q ss_pred hhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHH
Q 000913 259 RYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMM 338 (1226)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al 338 (1226)
..+.+.++++.... +.. +..|++.+||.||+.+. .||||||||++|||||
T Consensus 1324 t~eeI~~A~k~A~l---------------------------~~f--I~~LP~GydT~VGe~G~-~LSGGQkQRIaIARAL 1373 (1466)
T PTZ00265 1324 TREDVKRACKFAAI---------------------------DEF--IESLPNKYDTNVGPYGK-SLSGGQKQRIAIARAL 1373 (1466)
T ss_pred CHHHHHHHHHHcCC---------------------------HHH--HHhCccccCCccCCCCC-cCCHHHHHHHHHHHHH
Confidence 33333333332211 111 33689999999998765 5999999999999999
Q ss_pred hcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC----CeEE-EecChhHHH
Q 000913 339 VGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD----GQIV-YQGPRELVL 413 (1226)
Q Consensus 339 ~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~----G~iv-~~G~~~~~~ 413 (1226)
+++|+||+||||||+||+.++..|.+.|+++....++|+|+ +.|. .++.+.||+|++|++ |+++ ++|++++++
T Consensus 1374 lr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIi-IaHR-lsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl 1451 (1466)
T PTZ00265 1374 LREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIIT-IAHR-IASIKRSDKIVVFNNPDRTGSFVQAHGTHEELL 1451 (1466)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEE-Eech-HHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHH
Confidence 99999999999999999999999999998864223556655 4443 477888999999999 9955 899999986
Q ss_pred H
Q 000913 414 E 414 (1226)
Q Consensus 414 ~ 414 (1226)
+
T Consensus 1452 ~ 1452 (1466)
T PTZ00265 1452 S 1452 (1466)
T ss_pred h
Confidence 3
No 258
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.6e-35 Score=330.92 Aligned_cols=204 Identities=25% Similarity=0.386 Sum_probs=169.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-----------CccceEEEecCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----------VPQRTAAYISQH 234 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~-----------~~~~~~~yv~Q~ 234 (1226)
++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 4999999999999999999999999999999999999988 99999999887532 123579999999
Q ss_pred CCCCCCCCHHHHHHHHhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000913 235 DNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1226)
+.+++.+||+||+.++... ++. .. .+....++.+++.+||+...|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGE-PK---------------------------------EEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCC-CH---------------------------------HHHHHHHHHHHHHcCCcchhh
Confidence 8889899999999885421 110 00 001123566788899987666
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcC
Q 000913 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1226)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1226)
+. ++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.. .+ .+||.++|+..++.+++|
T Consensus 140 ~~-----~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SY-----PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EK-RTMVIVTHEMSFARDVAD 212 (250)
T ss_pred CC-----hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhcC
Confidence 54 456999999999999999999999999999999999999999999998764 34 445557888889999999
Q ss_pred cEEEEcCCeEEEecChhHHH
Q 000913 394 DIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1226)
+|++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 259
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-36 Score=335.59 Aligned_cols=218 Identities=21% Similarity=0.274 Sum_probs=181.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.+.++|+++.++ ++.+|+|+|+++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 578899998874 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Ch---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ..+++.++|++|++.+++..|++|++.+....... .....+..++.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 32 23445799999999888889999999875211100 0001123345688999999998777765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999987 58899999999986 78999
Q ss_pred eCCCC
Q 000913 1090 VGPLG 1094 (1226)
Q Consensus 1090 ~G~~~ 1094 (1226)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 98753
No 260
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-36 Score=335.22 Aligned_cols=217 Identities=27% Similarity=0.373 Sum_probs=180.6
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 488899988763 2469999999999999999999999999999999999876 4689999999765
Q ss_pred C---hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 K---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
. ...+++.++|++|+..+++.+|+.||+.+....... ........++.++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 3 223456799999998888889999999875321110 00111233456889999999987777664 46999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 899999999987 57789999999986 78898
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 8875
No 261
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=9.9e-36 Score=327.38 Aligned_cols=203 Identities=34% Similarity=0.544 Sum_probs=164.4
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1226)
+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGL 96 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCC
Confidence 559999999999999999999999999999999999998 76 999999998875433457899999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHH-HHHHcCCcccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDY-YLKVLGLDVCADTMVGDEM 320 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~~ 320 (1226)
||+||+.|+.......... ... .....+. .++.+++++..++.
T Consensus 97 tv~enl~~~~~~~~~~~~~---~~~----------------------------~~~~~~~~~l~~~~l~~~~~~~----- 140 (226)
T cd03234 97 TVRETLTYTAILRLPRKSS---DAI----------------------------RKKRVEDVLLRDLALTRIGGNL----- 140 (226)
T ss_pred cHHHHHHHHHHhhcccccc---hHH----------------------------HHHHHHHHHHHhhcchhhhccc-----
Confidence 9999999876433211000 000 0011233 67788887655544
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++..++.+++|++++|++
T Consensus 141 ~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~~ 219 (226)
T cd03234 141 VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLSS 219 (226)
T ss_pred ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEeC
Confidence 456999999999999999999999999999999999999999999998754 3556666544444689999999999999
Q ss_pred CeEEEec
Q 000913 401 GQIVYQG 407 (1226)
Q Consensus 401 G~iv~~G 407 (1226)
|+++++|
T Consensus 220 G~i~~~g 226 (226)
T cd03234 220 GEIVYSG 226 (226)
T ss_pred CEEEecC
Confidence 9999876
No 262
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=330.64 Aligned_cols=219 Identities=21% Similarity=0.284 Sum_probs=176.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCC---CCceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 931 (1226)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888887763 246999999999999999999999999999999999962 2112479999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.++.. ..+++.++|++|++.+++ .|++||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 234567999999988776 6999999886543311 12233445688999999986432111111 145
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 5899999999987 47789999999986 78
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999974
No 263
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=331.52 Aligned_cols=220 Identities=23% Similarity=0.307 Sum_probs=177.2
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC---CceEEEEEEEc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNITIS 930 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~---~~~~~G~i~i~ 930 (1226)
..++++|+++.++ ++.+|+|+|+++++||+++|+|+|||||||||++|+|... ..+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3588999998874 2359999999999999999999999999999999999742 11358999999
Q ss_pred CccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000913 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1226)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1226)
|.++.. ..+++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.+........ .+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-SA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-Cc
Confidence 987632 234567999999988877 5999999987543311 12233456688899999985422111111 14
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++. +|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 6799999999999999999999999999999999999999999999985 4799999999986 47788999999986 6
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 88888864
No 264
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-36 Score=350.40 Aligned_cols=202 Identities=24% Similarity=0.300 Sum_probs=175.4
Q ss_pred ceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hh----hcceeeEeecCCCC
Q 000913 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ET----FARISGYCEQNDIH 952 (1226)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~~~~ 952 (1226)
...+|+|+||+|++||+++|+|||||||||||++|+|... +.+|+|.++|.++.. .. .++.+|||+|++.+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3468999999999999999999999999999999999876 568999999987642 11 23569999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000913 953 SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1226)
Q Consensus 953 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LD 1032 (1226)
++.+||+||+.|....+. ...++.++++.++++.++|.+..++.+ ..|||||||||+|||||+.+|+|||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765432 234455567889999999998877763 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1033 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1033 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999875 5899999999987 57889999999986 689998874
No 265
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=348.69 Aligned_cols=206 Identities=24% Similarity=0.337 Sum_probs=175.2
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1226)
..+|+|+||.|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|+..+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 45899999999999999999999999999999999999998 9999999998765432 2479999999999
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
++.+||+||+.|+....+... .+....++++++.+||++..+..+
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc-
Confidence 999999999999765432110 001123567889999987666544
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEE
Q 000913 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1226)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++....+ ++||.++|+..++.+++|+|++
T Consensus 163 ----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g-~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 163 ----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQ-RTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCC-CeEEEEECCHHHHHHhCCEEEE
Confidence 56999999999999999999999999999999999999999999998765334 4555578888999999999999
Q ss_pred EcCCeEEEecChhHHH
Q 000913 398 LSDGQIVYQGPRELVL 413 (1226)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1226)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999988764
No 266
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=332.33 Aligned_cols=217 Identities=19% Similarity=0.247 Sum_probs=179.3
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
.++++|+++.++ .+.+|+|+|+++++||++||+|||||||||||++|+|...+. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 377889988874 246999999999999999999999999999999999986532 2589999999
Q ss_pred ccCC-----hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++. ...+++.++|++|++.+++.+||+||+.+....+. ....++.++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 8753 12345679999999988999999999988654332 1123444567888999999842 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 467999999999999999999999999999999999999999999999864 699999999986 4778999999997
Q ss_pred c-----CcEEEEeCCC
Q 000913 1083 R-----GGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~-----Gg~~~y~G~~ 1093 (1226)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4799999874
No 267
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=335.98 Aligned_cols=214 Identities=28% Similarity=0.356 Sum_probs=179.5
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ +++.+|+|||+++++||++||+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56788888763 12358999999999999999999999999999999999876 45899999998763
Q ss_pred h-----hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
. ...++.++|++|++. .+...||.|++.+..... ....++..+.+.++++.++|.++.++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 124567999999963 333479999998764321 2334455567889999999988887764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 47788999999986 78999
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 9875
No 268
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-36 Score=324.12 Aligned_cols=196 Identities=30% Similarity=0.452 Sum_probs=165.3
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1226)
++|+|+|+.+++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 4999999999999 99999999999999999999999998 999999998875432 24679999999989999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000913 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1226)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1226)
+||+.+.....+... .+....++.+++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKI-----GS 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCch-----hh
Confidence 999998654322100 001123566788999987777655 46
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeE
Q 000913 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1226)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1226)
|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + ++|+.++|+..++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 5566678888889999999999999999
Q ss_pred EEec
Q 000913 404 VYQG 407 (1226)
Q Consensus 404 v~~G 407 (1226)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 269
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.3e-35 Score=334.02 Aligned_cols=223 Identities=23% Similarity=0.296 Sum_probs=179.9
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
+.++|+++.++...... ..+++.+|+|+|+++++||++||+|+|||||||||++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67888888874210000 0113579999999999999999999999999999999999876 56899999998754
Q ss_pred hh------hhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000913 936 QE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1226)
Q Consensus 936 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1226)
.. .+++.++|++|++ .+.+.+||+|++.+..... ........++.+.++++.+++. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 1356799999996 4667899999998754321 1122334456788999999996 556655 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999987 47778999999985 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999875
No 270
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=337.37 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=177.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++... ...+.+|+|||+++++|++++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67888988874210 001358999999999999999999999999999999999876 46899999998753
Q ss_pred h-------hhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 000913 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1226)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 1005 (1226)
. ..+++.++|++|++ .+++ .||+||+.|..... ..+.++.++.++++++.++|.+ ..+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23456799999996 3444 69999998864332 1233444566888999999973 45554 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 47788999999986 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 88888874
No 271
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.4e-36 Score=323.94 Aligned_cols=191 Identities=27% Similarity=0.369 Sum_probs=160.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCC-CCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDN-HIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~-~~~~lTV~ 244 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .++.+||+
T Consensus 14 ~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 14 EILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred ceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 4999999999999999999999999999999999999998 9999999988754333467999999863 35578999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.++....+. ....++.+++.+||++..++.+ ..|
T Consensus 91 e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 127 (205)
T cd03226 91 EELLLGLKELDA--------------------------------------GNEQAETVLKDLDLYALKERHP-----LSL 127 (205)
T ss_pred HHHhhhhhhcCc--------------------------------------cHHHHHHHHHHcCCchhcCCCc-----hhC
Confidence 999876432100 0013456788999987766554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+ .+|+.++|+..++.+++|++++|++|+++
T Consensus 128 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 128 SGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QG-KAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999999999999999999998764 34 44555778888899999999999999975
No 272
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.7e-35 Score=326.06 Aligned_cols=213 Identities=25% Similarity=0.361 Sum_probs=176.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++... ....+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~~---------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQGE---------HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCCC---------cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 478999988774210 01359999999999999999999999999999999999876 5689999999875
Q ss_pred Chh---h---h-cceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000913 935 KQE---T---F-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1226)
Q Consensus 935 ~~~---~---~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1226)
... . . ++.++|++|++.+++.+|+.||+.+....+. ....+.++++.++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 421 1 1 2569999999988888999999988654321 233444567889999999987776653 57
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1008 LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++. + +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQL-A-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 8999999999873 4 56999999986 56
Q ss_pred EEE
Q 000913 1087 EIY 1089 (1226)
Q Consensus 1087 ~~y 1089 (1226)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 653
No 273
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=332.46 Aligned_cols=220 Identities=21% Similarity=0.258 Sum_probs=180.3
Q ss_pred CCCCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEE
Q 000913 850 PFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGN 926 (1226)
Q Consensus 850 ~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~ 926 (1226)
|.+...++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+
T Consensus 8 ~~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~ 74 (260)
T PRK10744 8 ATAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGE 74 (260)
T ss_pred cCCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceE
Confidence 33445689999998874 2359999999999999999999999999999999999854 1 135899
Q ss_pred EEEcCccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccc
Q 000913 927 ITISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQ 997 (1226)
Q Consensus 927 i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~ 997 (1226)
|.++|.++.. ..+++.++|++|++.+++ .||+||+.+...... ..+.++.+++++++++.+++.+ ..+
T Consensus 75 i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 151 (260)
T PRK10744 75 ILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLH 151 (260)
T ss_pred EEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHh
Confidence 9999987531 234567999999988777 899999988653221 1233444567889999999843 233
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCe
Q 000913 998 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1077 (1226)
Q Consensus 998 ~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~ 1077 (1226)
.. +..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|+
T Consensus 152 ~~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~ 224 (260)
T PRK10744 152 QS-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDY 224 (260)
T ss_pred cC-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCE
Confidence 33 45799999999999999999999999999999999999999999999986 4789999999986 47788999
Q ss_pred EEEEecCcEEEEeCCC
Q 000913 1078 LFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1078 v~ll~~Gg~~~y~G~~ 1093 (1226)
+++|++ |+++..|+.
T Consensus 225 i~~l~~-G~i~~~g~~ 239 (260)
T PRK10744 225 TAFMYL-GELIEFGNT 239 (260)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999986 789998874
No 274
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-36 Score=301.34 Aligned_cols=200 Identities=27% Similarity=0.407 Sum_probs=178.6
Q ss_pred EEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhhhcceeeEeecCCCCCCCCCHHHH
Q 000913 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYES 961 (1226)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~ 961 (1226)
.+|+|||+++.+||.++++||||||||||||+++|..+ +..|.|.+||.+++..... -|.|+|++.++|.+||.||
T Consensus 19 ~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPgae--rgvVFQ~~~LlPWl~~~dN 94 (259)
T COG4525 19 SALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGAE--RGVVFQNEALLPWLNVIDN 94 (259)
T ss_pred hhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCcc--ceeEeccCccchhhHHHHH
Confidence 58999999999999999999999999999999999987 5689999999987654333 4899999999999999999
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000913 962 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1226)
Q Consensus 962 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~ 1041 (1226)
+.|+..++. +++.++.+.+.+.+..+||.+..++.+ -.||||||||+.|||||+.+|++|+||||++.||+-
T Consensus 95 vafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~ 166 (259)
T COG4525 95 VAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDAL 166 (259)
T ss_pred HHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHHH
Confidence 999988874 678899999999999999999988774 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCeEEEEecC-cEEEEeCCCC
Q 000913 1042 AAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG-GQEIYVGPLG 1094 (1226)
Q Consensus 1042 ~~~~i~~~l~~~~-~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G-g~~~y~G~~~ 1094 (1226)
+++.++++|-++. .+|+.++++||+.. +..-+++++++|+.| |+++..-|++
T Consensus 167 tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 167 TREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 9999999999986 46999999999976 455567999999865 6777766653
No 275
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.1e-35 Score=333.25 Aligned_cols=216 Identities=28% Similarity=0.405 Sum_probs=179.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 46778877763 2469999999999999999999999999999999999876 46899999998753
Q ss_pred h---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
. ...++.++|++|++.+++.+||+||+.+....... ......+..+.+.++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 2 23345689999998777889999999875311100 00111233456889999999987777663 569999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
||||++||++|+.+|++++|||||+|||+.+...+++.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999997 57789999999986 6889888
Q ss_pred CC
Q 000913 1092 PL 1093 (1226)
Q Consensus 1092 ~~ 1093 (1226)
+.
T Consensus 220 ~~ 221 (256)
T TIGR03873 220 PP 221 (256)
T ss_pred CH
Confidence 75
No 276
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=335.57 Aligned_cols=206 Identities=25% Similarity=0.346 Sum_probs=170.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC--C---CccceEEEecCCCC-CCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--F---VPQRTAAYISQHDN-HIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~--~---~~~~~~~yv~Q~d~-~~~ 239 (1226)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 4999999999999999999999999999999999999998 9999999998741 1 12357999999863 345
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
..||+||+.++....+... .+....++.+++.+||.+..++.
T Consensus 97 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~---- 138 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKP---- 138 (283)
T ss_pred cccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCC----
Confidence 6899999988653321100 00112456788999998766654
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+..++..++|+|++|+
T Consensus 139 -~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 139 -THCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELG-LTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhCCEEEEEE
Confidence 456999999999999999999999999999999999999999999998865334 455557888889999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000913 400 DGQIVYQGPRELVLE 414 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1226)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999988753
No 277
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=333.53 Aligned_cols=220 Identities=26% Similarity=0.343 Sum_probs=180.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1226)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 477888887763 246999999999999999999999999999999999986532 236999999986
Q ss_pred CCh--------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHcCCCccccccc
Q 000913 934 KKQ--------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-----PEVDSETRKMFIDEVMELVELNPLRQSLV 1000 (1226)
Q Consensus 934 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 1000 (1226)
... ...++.++|++|++.+++.+||+||+.+......+ .....++.+.+++++++.+++.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 22355689999999988999999999875321000 01112334567889999999987777653
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEE
Q 000913 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELF 1079 (1226)
Q Consensus 1001 g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ 1079 (1226)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.+ +|+|||+++|++. .+.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 56999999999999999999999999999999999999999999999975 4899999999986 4788999999
Q ss_pred EEecCcEEEEeCCCC
Q 000913 1080 LMKRGGQEIYVGPLG 1094 (1226)
Q Consensus 1080 ll~~Gg~~~y~G~~~ 1094 (1226)
+|.+ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9986 6889988753
No 278
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-35 Score=327.81 Aligned_cols=211 Identities=26% Similarity=0.318 Sum_probs=174.2
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 35677877663 2469999999999999999999999999999999999876 56899999998753
Q ss_pred hh----hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcC-CCcccccccCCCCCCCCCH
Q 000913 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE-LNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ..++.++|++|++.+++.+|++|++.+....+. .. ..+.++++++.++ +.+..+.. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCH
Confidence 21 134569999999999999999999988654321 11 1233567777776 45555554 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 47778999999986 78999
Q ss_pred eCCCC
Q 000913 1090 VGPLG 1094 (1226)
Q Consensus 1090 ~G~~~ 1094 (1226)
.|+..
T Consensus 213 ~~~~~ 217 (230)
T TIGR03410 213 SGAGD 217 (230)
T ss_pred ECCHH
Confidence 88753
No 279
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=319.75 Aligned_cols=196 Identities=30% Similarity=0.581 Sum_probs=163.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1226)
.++|+|++|.++.+. +++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~~---------~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKGR---------SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccCC---------CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 578999999997531 3457999999999999999999999999999999999986532 568999999987
Q ss_pred CCh--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
... ...++.++|++|++.+++.+||+|++.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 235567999999999999999999998753211 1222 3569999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777766643468889999999986 688776
Q ss_pred C
Q 000913 1091 G 1091 (1226)
Q Consensus 1091 G 1091 (1226)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 280
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=330.79 Aligned_cols=194 Identities=21% Similarity=0.294 Sum_probs=164.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 4999999999999999999999999999999999999998 9999999987543 2467999999988888899999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000913 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1226)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1226)
|+.++... . ....++.+++.+||.+..+.. +..||
T Consensus 101 nl~~~~~~----~------------------------------------~~~~~~~~l~~~gl~~~~~~~-----~~~LS 135 (257)
T PRK11247 101 NVGLGLKG----Q------------------------------------WRDAALQALAAVGLADRANEW-----PAALS 135 (257)
T ss_pred HHHhcccc----h------------------------------------HHHHHHHHHHHcCChhHhcCC-----hhhCC
Confidence 99875310 0 001245678889998766554 45699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEE
Q 000913 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1226)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1226)
|||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.+..+ .+||.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHG-FTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999999999999999999999998765334 445557888888999999999999999999
Q ss_pred ecChh
Q 000913 406 QGPRE 410 (1226)
Q Consensus 406 ~G~~~ 410 (1226)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 281
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.5e-35 Score=344.88 Aligned_cols=208 Identities=25% Similarity=0.294 Sum_probs=175.6
Q ss_pred ccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCc----cCCCCCc-------cceEEEe
Q 000913 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH----DMDEFVP-------QRTAAYI 231 (1226)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~----~~~~~~~-------~~~~~yv 231 (1226)
....+|+|+||.|++||+++|+|||||||||||++|+|+++|+ +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999998 999999996 3333221 2479999
Q ss_pred cCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc
Q 000913 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1226)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1226)
+|+..+++.+||+||+.|+....+... .+....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865433210 0112245678999999877
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhh
Q 000913 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1226)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1226)
.|..+ ..|||||||||+|||+|+.+|+||||||||+|||+.++.++.+.|+++.... +.+|+.++|+..++.++
T Consensus 158 ~~~~~-----~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKP-----GELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHh
Confidence 77655 4699999999999999999999999999999999999999999999876533 45555578889999999
Q ss_pred cCcEEEEcCCeEEEecChhHHH
Q 000913 392 FDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 282
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=329.46 Aligned_cols=200 Identities=26% Similarity=0.370 Sum_probs=166.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ...++|++|++.+++.+||+|
T Consensus 15 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 15 PALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHH
Confidence 4999999999999999999999999999999999999998 99999999987542 345899999988889999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000913 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1226)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1226)
|+.++....+... .+....++.+++.+||++..++.+ ..||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS 130 (255)
T PRK11248 90 NVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQLS 130 (255)
T ss_pred HHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhCC
Confidence 9988653321100 001123567888999987666544 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc--CCeE
Q 000913 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQI 403 (1226)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~--~G~i 403 (1226)
|||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++...+ ++||.++|+..++..++|+|++|+ +|++
T Consensus 131 gGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l~~~~G~i 209 (255)
T PRK11248 131 GGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETG-KQVLLITHDIEEAVFMATELVLLSPGPGRV 209 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCCcEE
Confidence 9999999999999999999999999999999999999999998754334 445557888889999999999998 5999
Q ss_pred EEecChh
Q 000913 404 VYQGPRE 410 (1226)
Q Consensus 404 v~~G~~~ 410 (1226)
+..++.+
T Consensus 210 ~~~~~~~ 216 (255)
T PRK11248 210 VERLPLN 216 (255)
T ss_pred EEEecCC
Confidence 9988654
No 283
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=317.43 Aligned_cols=190 Identities=59% Similarity=0.947 Sum_probs=162.6
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++.+. .++.+|+|+|+++++|++++|+||||||||||+++|+|.....+.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 477899988875210 12469999999999999999999999999999999999743224689999999876
Q ss_pred ChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
. ..+++.++|++|++.+++.+||+||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 5 345567999999998889999999998753110 39999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998744678899999998657888875
No 284
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=339.81 Aligned_cols=225 Identities=24% Similarity=0.247 Sum_probs=184.4
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.|+.+|+++.++...... ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 478899998875321100 00123579999999999999999999999999999999999876 4589999999876
Q ss_pred Ch------hhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 000913 935 KQ------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1226)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 1005 (1226)
.. ..+++.++||+|++ .+.+.+||.+++.+..... ......+.++++.++++.++|.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 32 13456799999997 5788899999987754332 12345556678999999999963 45554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
..||||||||++||+||+.+|+|||+||||+|||..++..|+++|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 999999999986 46678999999986
Q ss_pred cEEEEeCCC
Q 000913 1085 GQEIYVGPL 1093 (1226)
Q Consensus 1085 g~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 799999985
No 285
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-35 Score=326.03 Aligned_cols=212 Identities=27% Similarity=0.395 Sum_probs=180.1
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
.++|+++.++ .+.+|+|+|++++||++++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5677877763 2469999999999999999999999999999999999876 457999999987643
Q ss_pred h-hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000913 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1226)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqr 1015 (1226)
. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.+++.+..+..+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 1 234679999999998888999999988654332 223344556889999999988777663 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999998764 899999999986 47889999999986 688888863
No 286
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.3e-35 Score=345.46 Aligned_cols=203 Identities=22% Similarity=0.316 Sum_probs=176.5
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc----cCC---hhh---h-cceeeEee
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY----PKK---QET---F-ARISGYCE 947 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~----~~~---~~~---~-~~~~gyv~ 947 (1226)
+...+|+|+||+|++||+++|||+||||||||+++|+|... +..|+|.++|. ++. ... + ++.++||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45679999999999999999999999999999999999876 56899999995 221 111 2 24699999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000913 948 QNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1226)
Q Consensus 948 Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~ 1027 (1226)
|++.+++.+||+||+.|+...+ ..+..++++++.++++.++|.+..+..+ ..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999875443 2345566678899999999998887764 4699999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1028 il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999764 999999999987 57899999999986 799999985
No 287
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.5e-35 Score=324.76 Aligned_cols=201 Identities=27% Similarity=0.346 Sum_probs=162.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCC--CC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--NH 237 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5999999999999999999999999999999999999998 999999999876543 235799999987 46
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-ccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1226)
++.+||+||+.+.....+.....+ ......+.+++.++|. ...+..
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKKE--------------------------------ARKEAVLLLLVGVGLPEEVLNRY- 142 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHHH--------------------------------HHHHHHHHHHHHCCCChhHhhCC-
Confidence 678999999988654321100000 0011124567888885 444544
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++...+ ++||.++|+..++.+++|+|+
T Consensus 143 ----~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 143 ----PHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELG-LTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEE
Confidence 456999999999999999999999999999999999999999999998765224 455557778888888999999
Q ss_pred EEcCCeEEEec
Q 000913 397 LLSDGQIVYQG 407 (1226)
Q Consensus 397 lL~~G~iv~~G 407 (1226)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 288
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.9e-35 Score=326.14 Aligned_cols=201 Identities=26% Similarity=0.352 Sum_probs=165.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 14 HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 4999999999999999999999999999999999999998 9999999988754432 35699999999899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcC-Ccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDEM 320 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~~ 320 (1226)
||+||+.++....+.. . ....+.+++.++ +.+..++.
T Consensus 91 tv~~~l~~~~~~~~~~-~------------------------------------~~~~~~~l~~~~~l~~~~~~~----- 128 (230)
T TIGR03410 91 TVEENLLTGLAALPRR-S------------------------------------RKIPDEIYELFPVLKEMLGRR----- 128 (230)
T ss_pred cHHHHHHHHHHhcCcc-h------------------------------------HHHHHHHHHHHHhHHHHhhCC-----
Confidence 9999998875432110 0 001234455554 44444443
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
++.||||||||++||++|+.+|++++|||||+|||+.+..++.+.|+++.+. .+++|+.++|+..++.+++|+|++|++
T Consensus 129 ~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~ 207 (230)
T TIGR03410 129 GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVMER 207 (230)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4569999999999999999999999999999999999999999999987643 244555577888899999999999999
Q ss_pred CeEEEecChhHH
Q 000913 401 GQIVYQGPRELV 412 (1226)
Q Consensus 401 G~iv~~G~~~~~ 412 (1226)
|++++.|+.+++
T Consensus 208 g~i~~~~~~~~~ 219 (230)
T TIGR03410 208 GRVVASGAGDEL 219 (230)
T ss_pred CEEEEECCHHHc
Confidence 999999998876
No 289
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=333.94 Aligned_cols=215 Identities=24% Similarity=0.309 Sum_probs=180.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 5889999887631 12468999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ..+++.++|++|++. .++.+||+||+.+..... ..+.++.++.++++++.++|.+..++.+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 235667999999974 566789999998864322 1233445567889999999988777763 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ ++|||+++|+++. + ..+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 5999999999873 4 47999999986 78888
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8874
No 290
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=9.6e-36 Score=328.11 Aligned_cols=198 Identities=23% Similarity=0.376 Sum_probs=167.5
Q ss_pred eecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhhhcceeeEeecCCCCCCCCCHHHHHH
Q 000913 884 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 963 (1226)
Q Consensus 884 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 963 (1226)
|+|+|+++++|++++|+||||||||||+++|+|... +.+|+|.++|.++..... ..+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 568999999987643211 2489999999999999999998
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000913 964 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1226)
Q Consensus 964 f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~ 1043 (1226)
+...... .....++.++.+.++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7532111 12333444566889999999987777653 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1044 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1044 ~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999987 57888999999986 688887753
No 291
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=327.67 Aligned_cols=205 Identities=19% Similarity=0.335 Sum_probs=169.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|+++|.++....+ ++.++|++|++.+++.+
T Consensus 17 ~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (241)
T PRK10895 17 RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRL 93 (241)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccC
Confidence 4999999999999999999999999999999999999998 9999999998755432 35799999998889999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.+..+....... .+....++.+++.+||++..+.. +
T Consensus 94 tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 135 (241)
T PRK10895 94 SVYDNLMAVLQIRDDLSA---------------------------------EQREDRANELMEEFHIEHLRDSM-----G 135 (241)
T ss_pred cHHHHHhhhhhcccccCH---------------------------------HHHHHHHHHHHHHcCCHHHhhcc-----h
Confidence 999999876432110000 00112356678899997655544 4
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.. .+. +|+.++|+..++.+++|++++|++|
T Consensus 136 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~-tiii~sH~~~~~~~~~d~v~~l~~G 213 (241)
T PRK10895 136 QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGL-GVLITDHNVRETLAVCERAYIVSQG 213 (241)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCC-EEEEEEcCHHHHHHhcCEEEEEeCC
Confidence 56999999999999999999999999999999999999999999988753 344 4555677888999999999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
++++.|+++++.
T Consensus 214 ~i~~~~~~~~~~ 225 (241)
T PRK10895 214 HLIAHGTPTEIL 225 (241)
T ss_pred eEEeeCCHHHHh
Confidence 999999988763
No 292
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-36 Score=322.88 Aligned_cols=221 Identities=26% Similarity=0.359 Sum_probs=191.2
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1226)
..-++|+|+.++.||+..|||=||||||||+++|.++.+|+ +|+|+++|.++...+. ++.++.|+|...+
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaL 117 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFAL 117 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcc
Confidence 44689999999999999999999999999999999999998 9999999999876653 3679999999999
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
+|..||.||..|+.+.+|.... +.+.++.+.|+..||+...+.+
T Consensus 118 lPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~y-- 161 (386)
T COG4175 118 LPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKY-- 161 (386)
T ss_pred ccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcC--
Confidence 9999999999999999886421 1223466789999999888755
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEE
Q 000913 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1226)
+.+||||+||||.|||||+.+|+||+||||+|+|||--+.++.+-|.++-...++ +|+.++|+..|++++.|||.+
T Consensus 162 ---p~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~K-TIvFitHDLdEAlriG~rIai 237 (386)
T COG4175 162 ---PNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKK-TIVFITHDLDEALRIGDRIAI 237 (386)
T ss_pred ---cccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCC-eEEEEecCHHHHHhccceEEE
Confidence 4579999999999999999999999999999999999999999988887665444 556689999999999999999
Q ss_pred EcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHh
Q 000913 398 LSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEV 436 (1226)
Q Consensus 398 L~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v 436 (1226)
|.+|+||..|+++|++. .|...-+++|...+
T Consensus 238 mkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 238 MKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred ecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 99999999999999874 34444455666544
No 293
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=339.01 Aligned_cols=213 Identities=21% Similarity=0.237 Sum_probs=172.6
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCCCc-------cceEEEecCCC-
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFVP-------QRTAAYISQHD- 235 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d- 235 (1226)
..+|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 469999999999999999999999999999999999997421 128999999998865432 13699999987
Q ss_pred -CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 236 -NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
.+.|.+||.+++........... ..+....++.+|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 47899999999876543221000 0111234677899999974211
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
+-++.+.+|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++... .+.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 123456679999999999999999999999999999999999999999999998653 345666688999999999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000913 395 IILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1226)
|++|++|++++.|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998875
No 294
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-35 Score=330.40 Aligned_cols=225 Identities=23% Similarity=0.261 Sum_probs=182.3
Q ss_pred cCCCCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC---ceEEE
Q 000913 849 LPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITG 925 (1226)
Q Consensus 849 ~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G 925 (1226)
+|..+..+.++|+++.++ .+.+|+|||+++++||++||+|+|||||||||++|+|...+ .+.+|
T Consensus 14 ~~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G 80 (267)
T PRK14237 14 FPEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTG 80 (267)
T ss_pred cCCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcce
Confidence 344455789999998873 24699999999999999999999999999999999998642 14689
Q ss_pred EEEEcCccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccccccc
Q 000913 926 NITISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLV 1000 (1226)
Q Consensus 926 ~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 1000 (1226)
+|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....++.++.+.++++.++|.+..+...
T Consensus 81 ~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 157 (267)
T PRK14237 81 QILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDL 157 (267)
T ss_pred EEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhh
Confidence 99999987632 234567999999988777 69999998864322 11233344566888999999864322222
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEE
Q 000913 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1080 (1226)
Q Consensus 1001 g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~l 1080 (1226)
+. .+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|+++ ++.+.||++++
T Consensus 158 ~~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~ 234 (267)
T PRK14237 158 HK-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAF 234 (267)
T ss_pred cC-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEE
Confidence 22 246799999999999999999999999999999999999999999999985 4799999999987 57889999999
Q ss_pred EecCcEEEEeCCC
Q 000913 1081 MKRGGQEIYVGPL 1093 (1226)
Q Consensus 1081 l~~Gg~~~y~G~~ 1093 (1226)
|++ |++++.|+.
T Consensus 235 l~~-G~i~~~g~~ 246 (267)
T PRK14237 235 FYL-GDLIEYDKT 246 (267)
T ss_pred EEC-CEEEEeCCH
Confidence 985 799999875
No 295
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-35 Score=322.54 Aligned_cols=215 Identities=26% Similarity=0.337 Sum_probs=180.3
Q ss_pred cceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-C-CCCceeEEEEcCccCCCCCc-------cceEEEecCC
Q 000913 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-P-TLKVSGTVTYNGHDMDEFVP-------QRTAAYISQH 234 (1226)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~ 234 (1226)
...+++||||.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.|+|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4569999999999999999999999999999999999998 4 33568999999998755543 2579999998
Q ss_pred C--CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccc
Q 000913 235 D--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1226)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1226)
+ .+-|.+||.+.+.-..+.+.... ..++...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 5 68899999998876554321100 0112334567789999998632
Q ss_pred cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhc
Q 000913 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1226)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 392 (1226)
.+.+.++.+|||||||||.||.||+.+|++||.|||||+||..++.+|++.|+++.+ ..++.++.|+|+..-+.++|
T Consensus 145 --~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 --RRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred --HHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 234567889999999999999999999999999999999999999999999999987 56777888999999999999
Q ss_pred CcEEEEcCCeEEEecChhHHH
Q 000913 393 DDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~ 413 (1226)
|+|+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 296
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-35 Score=331.43 Aligned_cols=216 Identities=23% Similarity=0.266 Sum_probs=178.0
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1226)
.++++|+++.++ ++.+|+|+|++|++|++++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999998874 24699999999999999999999999999999999997642 13689999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc----cccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL----RQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++. ||.||+.|....+.. .....+..+.++++++.+++.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87632 2345679999999887774 999999987543321 11223345568899999999642 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 789999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 6 789998864
No 297
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=326.88 Aligned_cols=202 Identities=25% Similarity=0.387 Sum_probs=165.3
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (237)
T PRK11614 19 QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRM 95 (237)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 35699999998889999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHc-CCcccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1226)
||+||+.++..... . + +. ...++.+++.+ ++.+..++.
T Consensus 96 tv~~~l~~~~~~~~---~-~---~~-----------------------------~~~~~~~l~~~~~l~~~~~~~----- 134 (237)
T PRK11614 96 TVEENLAMGGFFAE---R-D---QF-----------------------------QERIKWVYELFPRLHERRIQR----- 134 (237)
T ss_pred cHHHHHHHhhhccC---h-h---HH-----------------------------HHHHHHHHHHHHHHHHHHhCc-----
Confidence 99999988642110 0 0 00 01123345555 355444433
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+.| ||.++|+..++.+++|++++|++
T Consensus 135 ~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~t-iii~sH~~~~~~~~~d~i~~l~~ 212 (237)
T PRK11614 135 AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMT-IFLVEQNANQALKLADRGYVLEN 212 (237)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCE-EEEEeCcHHHHHhhCCEEEEEeC
Confidence 456999999999999999999999999999999999999999999998764 3445 55577888899999999999999
Q ss_pred CeEEEecChhHHH
Q 000913 401 GQIVYQGPRELVL 413 (1226)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1226)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (237)
T PRK11614 213 GHVVLEDTGDALL 225 (237)
T ss_pred CEEEeeCCHHHHh
Confidence 9999999988764
No 298
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=338.36 Aligned_cols=220 Identities=18% Similarity=0.237 Sum_probs=180.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC-c-eEEEEEEEcCcc
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGNITISGYP 933 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-~-~~~G~i~i~g~~ 933 (1226)
++++|+++.++... +...+|+||||+|++||++||+|+||||||||+++|+|...+ + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDES---------APFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCCC---------ccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 68899988875321 125699999999999999999999999999999999997642 2 368999999987
Q ss_pred CCh---hhh----cceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc---cccccC
Q 000913 934 KKQ---ETF----ARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL---RQSLVG 1001 (1226)
Q Consensus 934 ~~~---~~~----~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~~g 1001 (1226)
+.. ..+ ++.++||+|++ .+.|.+||.+++........ ....++.++++.++++.++|.+. .+..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 642 111 23699999998 47888999988876543321 23445566788999999999753 3333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEE
Q 000913 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFL 1080 (1226)
Q Consensus 1002 ~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~l 1080 (1226)
+..|||||||||+||+||+.+|+||++||||+|||+.++..++++|+++.+ .|.|||++|||++ .+.+.+|++++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 457999999999999999999999999999999999999999999999976 5999999999987 47788999999
Q ss_pred EecCcEEEEeCCC
Q 000913 1081 MKRGGQEIYVGPL 1093 (1226)
Q Consensus 1081 l~~Gg~~~y~G~~ 1093 (1226)
|.. |+++..|+.
T Consensus 227 m~~-G~ive~g~~ 238 (326)
T PRK11022 227 MYA-GQVVETGKA 238 (326)
T ss_pred EEC-CEEEEECCH
Confidence 985 799999985
No 299
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=338.20 Aligned_cols=208 Identities=20% Similarity=0.251 Sum_probs=174.3
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCC--C
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d--~ 236 (1226)
..+|+|||+.|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999999987 9999999998765432 35799999987 5
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-ccccc
Q 000913 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTM 315 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1226)
+.+.+||.+++.+..+...... ..+....+..+++.+||+. .+++
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~gL~~~~~~~- 150 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------------------------------AAERREKALAMMAKVGLRPEHYDR- 150 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------------------------------HHHHHHHHHHHHHHCCCChHHhcC-
Confidence 8899999999987654321000 0011234677899999963 4554
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
.+..|||||||||+||+||+.+|++||+||||+|||..++.+|++.|+++.+. .+++|+.++|+...+.+++|+|
T Consensus 151 ----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 151 ----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 45579999999999999999999999999999999999999999999987653 3556666899999999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000913 396 ILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1226)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988753
No 300
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.3e-35 Score=326.72 Aligned_cols=206 Identities=24% Similarity=0.390 Sum_probs=168.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ ...+|+|+++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 3899999999999999999999999999999999999863 22389999999987542 1246799999998888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc----ccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1226)
+ +||+||+.+.....+.... .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 9999999987543221000 00112356678889997 44444
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
. +..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .+||.++|+..++.+++|+
T Consensus 141 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 S-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 3 456999999999999999999999999999999999999999999998754 3 4556678888899999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000913 395 IILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1226)
|++|++|+++++|+++++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988763
No 301
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.1e-35 Score=328.88 Aligned_cols=205 Identities=22% Similarity=0.322 Sum_probs=170.3
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC----------------ccceEE
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----------------PQRTAA 229 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~----------------~~~~~~ 229 (1226)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 14 TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 4999999999999999999999999999999999999998 999999998875321 146799
Q ss_pred EecCCCCCCCCCCHHHHHHHHhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCC
Q 000913 230 YISQHDNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1226)
Q Consensus 230 yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1226)
|++|++.+++.+||+||+.++... .+.. . .+....++.+++.+|+
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl 136 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVLGMA-R---------------------------------AEAEKRAMELLDMVGL 136 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCC
Confidence 999998889999999999875321 1100 0 0011234667889999
Q ss_pred cccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhH
Q 000913 309 DVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1226)
Q Consensus 309 ~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~ 388 (1226)
++..+.. ++.||||||||++||++|+.+|+++||||||+|||+.+...+.+.|+++... .+++|+.++|+..++
T Consensus 137 ~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~ 210 (252)
T TIGR03005 137 ADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGFA 210 (252)
T ss_pred hhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHH
Confidence 8766544 4569999999999999999999999999999999999999999999987653 345556678888899
Q ss_pred HhhcCcEEEEcCCeEEEecChhHHH
Q 000913 389 YDLFDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
.+++|++++|++|++++.|+.+++.
T Consensus 211 ~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 211 REFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999988763
No 302
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.7e-35 Score=322.94 Aligned_cols=196 Identities=24% Similarity=0.356 Sum_probs=160.2
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1226)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 45999999999999999999999999999999999999998 9999999998765432 1469999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
++.+||+||+.+......... .+....+..+++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999998653221100 001123456788999987666544
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEE
Q 000913 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1226)
..|||||||||+||++|+.+|++|||||||+|||..++..+.+.|+++++..+.| |+.++|+..++. .+|+|++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~t-ii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTS-FLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHh-hcCEEEE
Confidence 4699999999999999999999999999999999999999999999876533445 455667766664 5799999
Q ss_pred EcCCeEE
Q 000913 398 LSDGQIV 404 (1226)
Q Consensus 398 L~~G~iv 404 (1226)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 303
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3e-35 Score=325.50 Aligned_cols=233 Identities=24% Similarity=0.311 Sum_probs=181.9
Q ss_pred EEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHH
Q 000913 119 VRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLAL 198 (1226)
Q Consensus 119 v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L 198 (1226)
|+.+|++.++.... .-+++.|.+.+.+ ..+...+++|+|+|+.+++|++++|+|||||||||||++|
T Consensus 1 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i 67 (236)
T cd03267 1 IEVSNLSKSYRVYS---KEPGLIGSLKSLF----------KRKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKIL 67 (236)
T ss_pred CceecchhhccCcC---CccccchhHHHHH----------hcccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 35678888886532 2233444444332 1233446799999999999999999999999999999999
Q ss_pred hcCCCCCCCceeEEEEcCccCCCC--CccceEEEec-CCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCC
Q 000913 199 AGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYIS-QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1226)
Q Consensus 199 ~G~~~~~~~~~G~I~~nG~~~~~~--~~~~~~~yv~-Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1226)
+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++.+||+||+.+.....+...
T Consensus 68 ~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~~~----------------- 127 (236)
T cd03267 68 SGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDLPP----------------- 127 (236)
T ss_pred hCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCCCH-----------------
Confidence 9999998 99999999875332 1245799997 55667889999999988654332110
Q ss_pred CCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCC
Q 000913 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLD 355 (1226)
Q Consensus 276 ~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD 355 (1226)
++....++.+++.+||++..|+.++ .||||||||++||++|+.+|++++|||||+|||
T Consensus 128 -----------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD 185 (236)
T cd03267 128 -----------------ARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLD 185 (236)
T ss_pred -----------------HHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 0011234567888999888887654 599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEec
Q 000913 356 SSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1226)
Q Consensus 356 s~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1226)
+.++..+.+.|+++++..+ ++|+.++|+..++.+++|++++|.+|++++.|
T Consensus 186 ~~~~~~l~~~l~~~~~~~~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 186 VVAQENIRNFLKEYNRERG-TTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHHhcCC-CEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999998765334 45555778888899999999999999998765
No 304
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=332.29 Aligned_cols=218 Identities=26% Similarity=0.356 Sum_probs=177.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc------eEEEEEEE
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGNITI 929 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~------~~~G~i~i 929 (1226)
++++|+++.++ ++.+|+|+|++|++|++++|+|||||||||||++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56788887763 246999999999999999999999999999999999986521 12799999
Q ss_pred cCccCCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000913 930 SGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1226)
Q Consensus 930 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1226)
+|.+... ..+++.++|++|++..++.+||+||+.+....... .....++.++.++++++.+++.+..++. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987532 23456689999998766669999999875321110 0111123345688999999998776655 3
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhc
Q 000913 1006 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1075 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~---------~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~ 1075 (1226)
..|||||||||+||++|+ .+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999998765 899999999987 477889
Q ss_pred CeEEEEecCcEEEEeCCC
Q 000913 1076 DELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1076 D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|++++|++ |++++.|+.
T Consensus 223 d~i~~l~~-G~i~~~g~~ 239 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAP 239 (272)
T ss_pred CEEEEEEC-CeEEEecCH
Confidence 99999986 789999875
No 305
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2e-35 Score=322.24 Aligned_cols=194 Identities=27% Similarity=0.391 Sum_probs=162.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1226)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 15 ~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 15 AALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 4999999999999999999999999999999999999998 999999999875432 2357999999998999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.++....+.. . ++....++.+++.+||++..++.+
T Consensus 92 ~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (214)
T cd03292 92 DRNVYENVAFALEVTGVP--P--------------------------------REIRKRVPAALELVGLSHKHRALP--- 134 (214)
T ss_pred CCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHhhCCh---
Confidence 999999999875432210 0 001123566788899987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+ .+ ++||.++|+..++.+++|++++|+
T Consensus 135 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tiiivtH~~~~~~~~~d~i~~l~ 210 (214)
T cd03292 135 --AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AG-TTVVVATHAKELVDTTRHRVIALE 210 (214)
T ss_pred --hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998754 34 455557788888989999999999
Q ss_pred CCeE
Q 000913 400 DGQI 403 (1226)
Q Consensus 400 ~G~i 403 (1226)
+|++
T Consensus 211 ~G~~ 214 (214)
T cd03292 211 RGKL 214 (214)
T ss_pred CCcC
Confidence 9974
No 306
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.8e-35 Score=322.34 Aligned_cols=198 Identities=23% Similarity=0.298 Sum_probs=167.7
Q ss_pred EeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hhhcceeeEeecCCCCCCCCCHHHH
Q 000913 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTIYES 961 (1226)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 961 (1226)
+++|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3579999999999999999999999999999999876 468999999987642 2345679999999999888999999
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000913 962 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1226)
Q Consensus 962 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~ 1041 (1226)
+.+...... ... ...++.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987532211 111 22345678899999998777766 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 000913 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1226)
Q Consensus 1042 ~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~ 1092 (1226)
++..+++.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999986 47788999999985 78888774
No 307
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=335.10 Aligned_cols=219 Identities=22% Similarity=0.292 Sum_probs=181.1
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.+.++|+++.++.... ...+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 3788999988752100 012469999999999999999999999999999999999876 5689999999876
Q ss_pred Ch----hhhcceeeEeecCCCC-CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 935 KQ----ETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
.. ...++.+||++|++.. +...||.|++.|..... .....+.+++++++++.++|.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 2346679999999742 33469999999875432 2334455667899999999998887764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~ 1088 (1226)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++. +. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-AV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-Hh-cCCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999976 49999999999873 54 4999999986 7899
Q ss_pred EeCCC
Q 000913 1089 YVGPL 1093 (1226)
Q Consensus 1089 y~G~~ 1093 (1226)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 99875
No 308
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=332.18 Aligned_cols=216 Identities=24% Similarity=0.291 Sum_probs=181.0
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 5889999988742 11358999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ...++.++|++|++. +++..|+.+++.|..... ....++..+.++++++.+++.+..+.. +..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 42 245667999999974 677789999998864322 123444456788999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|++.. +.. +|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~-~~~-~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE-AME-ADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH-Hhc-CCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 8999999999873 554 999999986 79999
Q ss_pred eCCCC
Q 000913 1090 VGPLG 1094 (1226)
Q Consensus 1090 ~G~~~ 1094 (1226)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 98753
No 309
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=363.34 Aligned_cols=221 Identities=21% Similarity=0.304 Sum_probs=185.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+||||++++||+++|+||||||||||+++|+|...+++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378899988773 2469999999999999999999999999999999999876433689999999876
Q ss_pred Chh----hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
... ..++.+|||+|++.+++.+||+||+.|....+.....+.++..++++++++.+++.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 421 234569999999988899999999988653321111223344567889999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999878999999999986 47788999999986 789999
Q ss_pred CCCCc
Q 000913 1091 GPLGR 1095 (1226)
Q Consensus 1091 G~~~~ 1095 (1226)
|+...
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 98653
No 310
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.9e-35 Score=320.58 Aligned_cols=189 Identities=23% Similarity=0.370 Sum_probs=162.5
Q ss_pred eEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC---h----hhhcceeeEeecCCCCC
Q 000913 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK---Q----ETFARISGYCEQNDIHS 953 (1226)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 953 (1226)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999876 56899999998742 1 12456799999999988
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000913 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1226)
Q Consensus 954 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDE 1033 (1226)
+.+|++||+.+....+ .....+..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8899999999865432 1233444567889999999988777663 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000913 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1226)
Q Consensus 1034 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll 1081 (1226)
||+|||+.++..+.+.|+++.++|.|||+++|++. +.+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777999999999986 34689999875
No 311
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.6e-35 Score=338.70 Aligned_cols=224 Identities=19% Similarity=0.288 Sum_probs=182.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1226)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47899998877532 12356999999999999999999999999999999999987531 238999999987
Q ss_pred CCh---hh---hc-ceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 000913 934 KKQ---ET---FA-RISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1226)
Q Consensus 934 ~~~---~~---~~-~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 1004 (1226)
+.. .. ++ +.++||+|++ .+.+.+|+.+++.+...... ..+.++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 642 11 22 4699999998 57889999999887544332 234455567788999999997533221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1005 ~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
+.+||||||||++||+||+.+|+||++||||+|||+.++..|+++|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999999765 899999999987 46778999999985
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 799999985
No 312
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.1e-34 Score=364.82 Aligned_cols=209 Identities=28% Similarity=0.379 Sum_probs=178.4
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++++||+|+|+. .++.+|+|+|++++|||.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999877 568999999988
Q ss_pred CC---hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
+. ...+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~-----~-~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA-----P-LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC-----C-CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 65 3567888999999998876 59999998742 1 22 23477888888887643 4455544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|++++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 3689999999999999999999999999999999999999999999886 589999999985 5678999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 799999984
No 313
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-35 Score=327.47 Aligned_cols=219 Identities=21% Similarity=0.264 Sum_probs=176.3
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC-ceEEEEEEEcCccC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 934 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 934 (1226)
++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56788887773 24699999999999999999999999999999999997532 24689999999876
Q ss_pred Ch---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
.. ..+++.++|++|++.+++ .||+||+.+....+.... .....+++++++++.+++.+........ .+..||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQ-NALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcC-CcccCCHH
Confidence 43 234567999999988887 699999998654332111 1233445678899999995422111111 14579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ |+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999986 47789999999986 7999988
Q ss_pred CC
Q 000913 1092 PL 1093 (1226)
Q Consensus 1092 ~~ 1093 (1226)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 74
No 314
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=327.88 Aligned_cols=209 Identities=25% Similarity=0.344 Sum_probs=175.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+|+++++|++++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 367888888763 2469999999999999999999999999999999999865 4689999999875
Q ss_pred Ch---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSg 1010 (1226)
.. ...++.++|++|++.+++ .||+||+.+....+ . . ..+++.++++.+++. +..++. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G--E--KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C--c--HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999988776 69999998753321 1 1 124578899999996 455554 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 999999999987 47788999999986 68888
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8874
No 315
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=334.59 Aligned_cols=205 Identities=24% Similarity=0.358 Sum_probs=169.0
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCCC-
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDN- 236 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~-------~~~~~~yv~Q~d~- 236 (1226)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 35999999999999999999999999999999999999998 999999999875321 1357999999862
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000913 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1226)
.+..+||+||+.|+....+... .+....++.+++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFSE----------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 3446899999998654321100 01112356788899996 455554
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+|
T Consensus 143 -----~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 -----PFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 456999999999999999999999999999999999999999999998753 3 455666888999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000913 396 ILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1226)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 316
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.5e-35 Score=326.09 Aligned_cols=201 Identities=29% Similarity=0.401 Sum_probs=169.5
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhcceeeEee-cCCCCCCC
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCE-QNDIHSPF 955 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~ 955 (1226)
+.+.+|+|+||++++|++++|+|+|||||||||++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 44679999999999999999999999999999999999876 568999999976432 23456799997 55667788
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000913 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1226)
Q Consensus 956 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPT 1035 (1226)
+|++|++.+...++. ...++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 999999988654432 233444556788999999988777764 569999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1036 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999986 47788999999986 6777654
No 317
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.8e-35 Score=321.17 Aligned_cols=193 Identities=29% Similarity=0.415 Sum_probs=161.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1226)
.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 16 AALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 4999999999999999999999999999999999999988 999999999876542 2357999999988888
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.++....+... ......++.+++.+||++..++.+
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 135 (214)
T TIGR02673 93 DRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP--- 135 (214)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999998754322100 001123567788999986656554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++.+++|++++|+
T Consensus 136 --~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l~ 211 (214)
T TIGR02673 136 --EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVIILD 211 (214)
T ss_pred --hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEEec
Confidence 46999999999999999999999999999999999999999999998754 34 455557788889999999999999
Q ss_pred CCe
Q 000913 400 DGQ 402 (1226)
Q Consensus 400 ~G~ 402 (1226)
+|+
T Consensus 212 ~G~ 214 (214)
T TIGR02673 212 DGR 214 (214)
T ss_pred CCC
Confidence 985
No 318
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=336.23 Aligned_cols=219 Identities=21% Similarity=0.301 Sum_probs=178.0
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++... .....+|+||||++++||++||+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 588999998874210 001358999999999999999999999999999999999876 4689999999765
Q ss_pred C--------hhhhcceeeEeecCCCC-CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCC
Q 000913 935 K--------QETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPG 1004 (1226)
Q Consensus 935 ~--------~~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~ 1004 (1226)
. ...+++.++|++|++.. ....||+||+.|..... ....++..+.++++++.++|. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999742 22369999998864322 123344456688899999994 566655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1005 ~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
+..||||||||++||+||+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999875 4899999999987 57889999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 689988874
No 319
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=331.68 Aligned_cols=204 Identities=26% Similarity=0.366 Sum_probs=167.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCCCC-CCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.+
T Consensus 23 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (271)
T PRK13632 23 NALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGA 99 (271)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcc
Confidence 4899999999999999999999999999999999999998 999999999876432 2467999999863 67789
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.++....+... ++....++.+++.+||++..++.+
T Consensus 100 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (271)
T PRK13632 100 TVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP----- 140 (271)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc-----
Confidence 99999988653221100 001124567888999987766654
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++....+.|+|+ ++|+..++. .+|++++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii-~sH~~~~~~-~~d~v~~l~~G 218 (271)
T PRK13632 141 QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLIS-ITHDMDEAI-LADKVIVFSEG 218 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEE-EEechhHHh-hCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999876532345444 566666664 79999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (271)
T PRK13632 219 KLIAQGKPKEIL 230 (271)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 320
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.5e-35 Score=325.27 Aligned_cols=212 Identities=26% Similarity=0.386 Sum_probs=179.9
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ .+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +..|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5677777663 2469999999999999999999999999999999999876 468999999987643
Q ss_pred h-hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000913 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1226)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqr 1015 (1226)
. ..++.++|++|++.+++.+|+.||+.+....+. .......+.++++++.+++.+..++.. ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234679999999988888999999987654331 223334466789999999987777653 5699999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
++||++|+.+|++++|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 899999999986 47888999999985 789999875
No 321
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=334.54 Aligned_cols=217 Identities=24% Similarity=0.283 Sum_probs=180.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCce-EEEEEEEcCcc
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGNITISGYP 933 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~-~~G~i~i~g~~ 933 (1226)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788999887741 12358999999999999999999999999999999999865311 13899999987
Q ss_pred CCh---hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 934 KKQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
... ...++.+|||+|++. .++..||.||+.|....+ ..+.++.+++++++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567999999974 566789999998764322 234555567789999999998877766 45799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~ 1088 (1226)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + +.+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 8999999999874 4 57999999986 7899
Q ss_pred EeCCC
Q 000913 1089 YVGPL 1093 (1226)
Q Consensus 1089 y~G~~ 1093 (1226)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99975
No 322
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=328.22 Aligned_cols=205 Identities=33% Similarity=0.509 Sum_probs=170.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (258)
T PRK13548 16 TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFT 92 (258)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCC
Confidence 4999999999999999999999999999999999999988 9999999988754332 356999999988878899
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+||+.++....+.. . ++....++.+++.+||++..++.+ .
T Consensus 93 v~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 133 (258)
T PRK13548 93 VEEVVAMGRAPHGLS-R---------------------------------AEDDALVAAALAQVDLAHLAGRDY-----P 133 (258)
T ss_pred HHHHHHhhhcccCCC-c---------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----c
Confidence 999998864221100 0 001123566788999987666654 4
Q ss_pred CCChhHhhHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 323 GISGGQKKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~------~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
.|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+..+ ++||.++|+..++.+++|+|+
T Consensus 134 ~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~ 212 (258)
T PRK13548 134 QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLAARYADRIV 212 (258)
T ss_pred cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhcCEEE
Confidence 69999999999999999 59999999999999999999999999998763334 455557788889999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000913 397 LLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1226)
+|++|++++.|+.+++.
T Consensus 213 ~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 213 LLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEECCEEEeeCCHHHHh
Confidence 99999999999987764
No 323
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-35 Score=330.50 Aligned_cols=215 Identities=22% Similarity=0.258 Sum_probs=176.3
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 930 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 930 (1226)
..+.++|+++.++ .+.+|+|+||+|++||+++|+|||||||||||++|+|.... .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3588999998874 24699999999999999999999999999999999997542 1368999999
Q ss_pred CccCC-----hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccC
Q 000913 931 GYPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVG 1001 (1226)
Q Consensus 931 g~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g 1001 (1226)
|.++. ...+++.++|++|++.+++ .||+||+.+.+..+. ... ..++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98753 2234567999999998887 499999998754332 111 23455778888888742 23332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000913 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1226)
Q Consensus 1002 ~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll 1081 (1226)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.||++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999999854 799999999987 588899999999
Q ss_pred ec----------CcEEEEeCCC
Q 000913 1082 KR----------GGQEIYVGPL 1093 (1226)
Q Consensus 1082 ~~----------Gg~~~y~G~~ 1093 (1226)
++ +|++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 86 3678888875
No 324
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-35 Score=326.78 Aligned_cols=220 Identities=21% Similarity=0.278 Sum_probs=178.5
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1226)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478899988774 2469999999999999999999999999999999999854 21 2579999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.++.. ..+++.++|++|++.+++.+|++||+.+...... ..+..+.++.++++++.+++.......... .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87532 2356679999999999999999999987643321 122333445678899999986421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.||++++|.+ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999986 57789999999985 78
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9998874
No 325
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=338.32 Aligned_cols=223 Identities=16% Similarity=0.202 Sum_probs=179.4
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC--ceEEEEEEEcCc
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNITISGY 932 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~ 932 (1226)
-|+++|+++.++.. .+...+|+||||+|++||++||+|+||||||||+++|+|.... .+..|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 36788998877532 1235799999999999999999999999999999999998642 246799999998
Q ss_pred cCCh---hh----hcceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCC---CCHHHHHHHHHHHHHHcCCCcc---cc
Q 000913 933 PKKQ---ET----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPE---VDSETRKMFIDEVMELVELNPL---RQ 997 (1226)
Q Consensus 933 ~~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~---~~~~~~~~~v~~~l~~l~l~~~---~~ 997 (1226)
++.. .. .++.++||+|++. +.+.+||.+++.+......... ....+.++.+.++++.++|.+. .+
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 7532 11 1246999999975 5788999999976422111000 1123445678899999999753 23
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcC
Q 000913 998 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFD 1076 (1226)
Q Consensus 998 ~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D 1076 (1226)
.. +..|||||||||+||+||+.+|+||||||||+|||+.++..|+++|+++.++ |.|||++|||++ .+.+.+|
T Consensus 154 ~~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~d 227 (330)
T PRK15093 154 SF-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWAD 227 (330)
T ss_pred CC-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCC
Confidence 43 4579999999999999999999999999999999999999999999999864 999999999986 4778999
Q ss_pred eEEEEecCcEEEEeCCC
Q 000913 1077 ELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1077 ~v~ll~~Gg~~~y~G~~ 1093 (1226)
++++|.+ |++++.|+.
T Consensus 228 ri~vm~~-G~ive~g~~ 243 (330)
T PRK15093 228 KINVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEEC-CEEEEECCH
Confidence 9999985 799999975
No 326
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.6e-36 Score=293.36 Aligned_cols=211 Identities=25% Similarity=0.381 Sum_probs=178.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
|+.++++..+... .+...||++|++.|++||.+||+|||||||||||-+|+|... +.+|+|.+.|++..
T Consensus 7 i~~~~l~ktvg~~---------~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~ 75 (228)
T COG4181 7 IEVHHLSKTVGQG---------EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLH 75 (228)
T ss_pred eehhhhhhhhcCC---------CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchh
Confidence 4555665554322 345789999999999999999999999999999999999876 56899999999864
Q ss_pred h---h---h-hcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000913 936 Q---E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1226)
Q Consensus 936 ~---~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~L 1008 (1226)
+ + . ..+.+|+|+|...+.|++|..||+.....++.... .+......+.++.+||.+-.+.+ +..|
T Consensus 76 ~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qL 147 (228)
T COG4181 76 KLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHY-----PAQL 147 (228)
T ss_pred hcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccC-----cccc
Confidence 3 1 1 34679999999999999999999999988876432 22334567889999998877766 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
||||+|||+||||++..|+|||.||||-+||..+...|.+++-.+. +.|.|.|++||||. +...|||.+-|.. |++
T Consensus 148 SGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l 224 (228)
T COG4181 148 SGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRL 224 (228)
T ss_pred CchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-cee
Confidence 9999999999999999999999999999999999999999999886 45999999999986 6788999999986 566
Q ss_pred E
Q 000913 1088 I 1088 (1226)
Q Consensus 1088 ~ 1088 (1226)
+
T Consensus 225 ~ 225 (228)
T COG4181 225 V 225 (228)
T ss_pred c
Confidence 5
No 327
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=330.47 Aligned_cols=204 Identities=23% Similarity=0.349 Sum_probs=166.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCCC-C
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDN-H 237 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~-------~~~~~~yv~Q~d~-~ 237 (1226)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .
T Consensus 21 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 21 RALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 4999999999999999999999999999999999999998 999999999875421 2356999999852 3
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-cccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMV 316 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 316 (1226)
+...||+||+.|.....+... ++....++.+++.+||.. ..+..
T Consensus 98 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (280)
T PRK13649 98 LFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN- 142 (280)
T ss_pred hccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC-
Confidence 345799999988653321100 001123466788899963 44443
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.+ . +++||.++|+..++.+++|+++
T Consensus 143 ----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i~ 216 (280)
T PRK13649 143 ----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFVY 216 (280)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEEE
Confidence 456999999999999999999999999999999999999999999998754 3 4455557788888999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000913 397 LLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1226)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 217 VLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999988764
No 328
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-35 Score=326.86 Aligned_cols=206 Identities=21% Similarity=0.301 Sum_probs=164.3
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 38999999999999999999999999999999999998620 1289999999876421 1246799999988777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc----ccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1226)
.+||+||+.|+....+.... .+....++.+++.+|+. +..++
T Consensus 101 -~~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 -LMSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred -cCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 49999999987543211000 00112345566777763 33444
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.++.|||||||||+|||+|+.+|++|||||||+|||+.+...+++.|+++. .+ ++||.++|+..++.+++|+
T Consensus 147 -----~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 -----NALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred -----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCE
Confidence 345799999999999999999999999999999999999999999999874 24 4555578888899999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000913 395 IILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1226)
|++|++|+++..|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 329
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=331.83 Aligned_cols=205 Identities=26% Similarity=0.352 Sum_probs=168.7
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC----ccceEEEecCCCC-CCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHDN-HIG 239 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1226)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 45999999999999999999999999999999999999998 999999999875422 2467999999863 344
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
..||.||+.|+....+... .+....++++++.+||+...++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5799999998754322100 011224577899999988777655
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++.+..+.| |+.++|+..++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-illvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGIT-IILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecChHHHhc-CCEEEEEE
Confidence 4699999999999999999999999999999999999999999999876533445 4556777777765 99999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|+++++|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 330
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-35 Score=330.70 Aligned_cols=205 Identities=25% Similarity=0.361 Sum_probs=170.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC-CCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1226)
.+|+|||+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 3999999999999999999999999999999999999998 9999999998754322 356999999863 34568
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.++....+... .+....++.+++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 99999987654321100 011224567889999987776654
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.||||||||++||+||+.+|++|||||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+.+|+|++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 469999999999999999999999999999999999999999999987653 2455566778888999999999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998874
No 331
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-35 Score=326.98 Aligned_cols=220 Identities=22% Similarity=0.303 Sum_probs=172.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.+
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (255)
T PRK11300 19 LAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREM 95 (255)
T ss_pred EEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 23589999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.++....... +...... .. + ..+ ....+....++.+++.+||++..+..+
T Consensus 96 tv~enl~~~~~~~~~~---~~~~~~~------~~-~--~~~-------~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 151 (255)
T PRK11300 96 TVIENLLVAQHQQLKT---GLFSGLL------KT-P--AFR-------RAESEALDRAATWLERVGLLEHANRQA----- 151 (255)
T ss_pred cHHHHHHHhhhccccc---hhhhhhc------cc-c--ccc-------cchhHHHHHHHHHHHhCChhhhhhCCh-----
Confidence 9999999864311000 0000000 00 0 000 000011234567788999987666544
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.|||||||||+||++|+.+|++|||||||+|||..+...+.+.|+++.+ ..+++||.++|+..++.+++|++++|++|
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998765 32445566788889999999999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
++++.|+.+++.
T Consensus 231 ~i~~~~~~~~~~ 242 (255)
T PRK11300 231 TPLANGTPEEIR 242 (255)
T ss_pred eEEecCCHHHHh
Confidence 999999988763
No 332
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-35 Score=329.43 Aligned_cols=215 Identities=23% Similarity=0.318 Sum_probs=172.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCCCC-CCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1226)
.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999998 999999999875432 2357999999864 68888
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||++|+.|.....+... .+....++.+++.+||.+..++. +
T Consensus 100 ~v~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVPY----------------------------------DEMHRRVSEALKQVDMLERADYE-----P 140 (269)
T ss_pred cHHHHHHhhHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC-----c
Confidence 99999988754321100 00112356678899998766654 4
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.||||||||++||+|++.+|+++||||||+|||+.++..+.+.|+++....+.|+ +.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~ti-iivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITI-ISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEE-EEEecCchHHhc-CCEEEEEECC
Confidence 56999999999999999999999999999999999999999999998754334454 446666677765 9999999999
Q ss_pred eEEEecChhHHHH---HHHhcCCCCC
Q 000913 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1226)
Q Consensus 402 ~iv~~G~~~~~~~---~F~~~Gf~cp 424 (1226)
++++.|+++++.+ .+...|+++|
T Consensus 219 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 244 (269)
T PRK13648 219 TVYKEGTPTEIFDHAEELTRIGLDLP 244 (269)
T ss_pred EEEEecCHHHHhcCHHHHHhcCCCCC
Confidence 9999999887643 3344454444
No 333
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=330.99 Aligned_cols=203 Identities=27% Similarity=0.388 Sum_probs=168.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCC-CCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDN-HIGE 240 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~-~~~~ 240 (1226)
.+|+||||+|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 3999999999999999999999999999999999999998 9999999998764322 357999999864 4677
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000913 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1226)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1226)
+||+||+.|+....+... .+....++.+++.+||++..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLPP----------------------------------IEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 899999998654321100 011123567788999987777654
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
..|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g-~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KG-KTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCHHHH-hhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998754 34 4455567777777 56999999999
Q ss_pred CeEEEecChhHHH
Q 000913 401 GQIVYQGPRELVL 413 (1226)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1226)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 334
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.1e-35 Score=324.11 Aligned_cols=210 Identities=23% Similarity=0.346 Sum_probs=170.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1226)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 16 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 16 KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988754432 24699999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.++..... ..+...... ...+....++.+++.+|+++..++.+
T Consensus 93 tv~~nl~~~~~~~~--~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (242)
T TIGR03411 93 TVFENLELALPRDK--SVFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLA----- 141 (242)
T ss_pred CHHHHHHHhhhccc--ccccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999998643110 000000000 00011234677889999987666554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. + .+||.++|+..++.+++|+|++|++|
T Consensus 142 ~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g 218 (242)
T TIGR03411 142 GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQG 218 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998753 3 45555778888999999999999999
Q ss_pred eEEEecChhHH
Q 000913 402 QIVYQGPRELV 412 (1226)
Q Consensus 402 ~iv~~G~~~~~ 412 (1226)
+++++|+.+++
T Consensus 219 ~~~~~~~~~~~ 229 (242)
T TIGR03411 219 SVLAEGSLDQV 229 (242)
T ss_pred eEEeeCCHHHH
Confidence 99999998775
No 335
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.7e-35 Score=330.66 Aligned_cols=224 Identities=21% Similarity=0.257 Sum_probs=180.4
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.+..+... ...+.+.+|+|+|+++++|+++||+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~~----~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGW----FRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCCc----ccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 37889999887421100 00012469999999999999999999999999999999999876 5689999999876
Q ss_pred Ch---hhhcceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCC
Q 000913 935 KQ---ETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGL 1008 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~L 1008 (1226)
.. ...++.++|++|++. +.+.+|+.|++.+...... .....+..+.++++++.++|. ...+.. +..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhc
Confidence 42 123456999999975 5677899999988654332 223344456788999999994 555554 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
||||||||+||++|+.+|+||+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i 228 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEV 228 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999764 899999999987 57778999999985 788
Q ss_pred EEeCCC
Q 000913 1088 IYVGPL 1093 (1226)
Q Consensus 1088 ~y~G~~ 1093 (1226)
++.|+.
T Consensus 229 ~~~~~~ 234 (267)
T PRK15112 229 VERGST 234 (267)
T ss_pred EecCCH
Confidence 888864
No 336
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.8e-35 Score=327.01 Aligned_cols=204 Identities=25% Similarity=0.349 Sum_probs=168.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC----------------CccceEE
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF----------------VPQRTAA 229 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~----------------~~~~~~~ 229 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|+++|.++... ..++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (257)
T PRK10619 19 EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLT 95 (257)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceE
Confidence 4999999999999999999999999999999999999988 99999999876421 1135799
Q ss_pred EecCCCCCCCCCCHHHHHHHHhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCC
Q 000913 230 YISQHDNHIGEMTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1226)
Q Consensus 230 yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1226)
||+|++.+++.+||+||+.++.. ..+.. ..+....+..+++.+||
T Consensus 96 ~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl 141 (257)
T PRK10619 96 MVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVGI 141 (257)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcCC
Confidence 99999989999999999987541 11100 00011235667889999
Q ss_pred cccc-cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhh
Q 000913 309 DVCA-DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPE 387 (1226)
Q Consensus 309 ~~~~-dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~ 387 (1226)
.+.. +. .+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. . +.+|+.++|+..+
T Consensus 142 ~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~~ 214 (257)
T PRK10619 142 DERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMGF 214 (257)
T ss_pred ChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHH
Confidence 7643 43 3457999999999999999999999999999999999999999999998754 3 4555567888889
Q ss_pred HHhhcCcEEEEcCCeEEEecChhHHH
Q 000913 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 388 ~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
+..++|+|++|++|++++.|+++++.
T Consensus 215 ~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 215 ARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 99999999999999999999988763
No 337
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-35 Score=319.67 Aligned_cols=191 Identities=25% Similarity=0.385 Sum_probs=163.3
Q ss_pred cccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hhhcceeeEeecCCCCCCCCCH
Q 000913 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1226)
Q Consensus 886 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 958 (1226)
|||+++++ |+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999876 468999999976531 1245679999999988889999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000913 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1226)
Q Consensus 959 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1226)
+||+.+..... .....++++.++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 2233445688899999998766665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999986 47788999999986 6777654
No 338
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-35 Score=323.29 Aligned_cols=199 Identities=27% Similarity=0.391 Sum_probs=171.7
Q ss_pred EeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh-hhcceeeEeecCCCCCCCCCHHHH
Q 000913 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYES 961 (1226)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~ 961 (1226)
+|+|+|++|++||+++|+|+||||||||+++|+|... +..|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999876 5689999999876431 234579999999998989999999
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000913 962 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1226)
Q Consensus 962 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~ 1041 (1226)
+.+..... .....+..+.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1233444556788999999988777664 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1042 ~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998764 999999999986 47788999999986 789988874
No 339
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7.2e-35 Score=328.10 Aligned_cols=206 Identities=26% Similarity=0.342 Sum_probs=169.8
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCC--C
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d--~ 236 (1226)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|+++|.++..... ++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999999998 9999999998764322 35699999986 4
Q ss_pred CCCCCCHHHHHHHHhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-ccccc
Q 000913 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1226)
+++.+||+||+.+..... ... ..+....++.+++.+||+ ...+.
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTSLD----------------------------------ESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhhC
Confidence 667899999998754211 000 000112356778899995 45554
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
. ++.|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++.+.. +++||.++|+...+.+++|+
T Consensus 147 ~-----~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 L-----PRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhcE
Confidence 4 45699999999999999999999999999999999999999999999876532 44556678888899999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000913 395 IILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1226)
+++|++|++++.|+++++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998764
No 340
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-35 Score=327.17 Aligned_cols=219 Identities=19% Similarity=0.247 Sum_probs=176.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1226)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478999988763 24699999999999999999999999999999999997542 1 1479999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.++.. ...++.+||++|++.+++. ||+||+.|....+. ....++..++++++++.+++.+........ .+.
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~-~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHT-QAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhC-Ccc
Confidence 87631 2345679999999888775 99999988643321 112334455678899999985421111111 146
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
+||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 799999999987 57889999999985 79
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9999874
No 341
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=325.67 Aligned_cols=205 Identities=20% Similarity=0.307 Sum_probs=165.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 49999999999999999999999999999999999987510 1289999999886432 1245799999988777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc----ccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1226)
+ +||+||+.|+.+..+... + +....++.+++.+|+. +..++
T Consensus 106 ~-~tv~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 150 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGANK--K--------------------------------DLDGVVENALRSAALWDETSDRLKS 150 (258)
T ss_pred c-ccHHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCCcchhhhhcC
Confidence 7 899999998754322100 0 0112345677888874 22333
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+..|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+++|+
T Consensus 151 -----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~--~~-~tiiivsH~~~~~~~~~d~ 222 (258)
T PRK14268 151 -----PALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK--KD-YTIVIVTHNMQQAARISDY 222 (258)
T ss_pred -----ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--hC-CEEEEEECCHHHHHHhCCE
Confidence 345799999999999999999999999999999999999999999999874 24 4556678888899999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000913 395 IILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1226)
|++|++|++++.|+++++.
T Consensus 223 i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 223 TGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988763
No 342
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.6e-35 Score=364.93 Aligned_cols=256 Identities=23% Similarity=0.327 Sum_probs=195.1
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.+++....+|+.++++.+++. . +....+.+...++++|+++.++.
T Consensus 284 ~~~~~~~~~ri~~~l~~~~~~-----~---~~~~~~~~~~~i~~~~v~~~y~~--------------------------- 328 (544)
T TIGR01842 284 FSGARQAYKRLNELLANYPSR-----D---PAMPLPEPEGHLSVENVTIVPPG--------------------------- 328 (544)
T ss_pred HHHHHHHHHHHHHHHhCCccc-----c---CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 578888899998888765541 0 01112223457999999998742
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
.++++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|+
T Consensus 329 -----~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~ 400 (544)
T TIGR01842 329 -----GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQD 400 (544)
T ss_pred -----CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCC
Confidence 1134899999999999999999999999999999999999998 9999999999876543 4689999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+++ .|++||+.+... ....+...++++.. ..+..++ .|++..||
T Consensus 401 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~~---------------------------~~~~~i~--~l~~gl~t 446 (544)
T TIGR01842 401 VELFP-GTVAENIARFGE----NADPEKIIEAAKLA---------------------------GVHELIL--RLPDGYDT 446 (544)
T ss_pred ccccc-ccHHHHHhccCC----CCCHHHHHHHHHHh---------------------------ChHHHHH--hCcccccc
Confidence 77665 599999985421 11112222221110 1122333 35667789
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+ ..||||||||++||||++++|++++|||||+|||+.++..+.+.|+++.. .++|+|++ +|... ..+.+|+
T Consensus 447 ~~~~~g-~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~i-th~~~-~~~~~d~ 522 (544)
T TIGR01842 447 VIGPGG-ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVVI-THRPS-LLGCVDK 522 (544)
T ss_pred ccCCCc-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEEE-eCCHH-HHHhCCE
Confidence 998764 56999999999999999999999999999999999999999999987642 34566654 44443 5678999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|++++.|+++++.+
T Consensus 523 i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 523 ILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred EEEEECCEEEeeCCHHHHhh
Confidence 99999999999999988753
No 343
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-35 Score=323.86 Aligned_cols=200 Identities=25% Similarity=0.393 Sum_probs=165.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 4999999999999999999999999999999999999998 999999998875432 2457999999887776 69
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccccccccc
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGDEMI 321 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1226)
|+||+.++....+ . ....++.+++.+||+ +..++ .+
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----DV 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----Cc
Confidence 9999987542210 0 001245578888996 34443 34
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
..|||||||||+||+|++.+|+++||||||+|||+.+...+.+.|+++....+. +|+.++|+..++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~-tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNL-TVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCC-EEEEEeccHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999987653344 5555788888999999999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
++++.|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988763
No 344
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-35 Score=325.97 Aligned_cols=215 Identities=26% Similarity=0.300 Sum_probs=175.3
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1226)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478899988774 2469999999999999999999999999999999999732 1 12479999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.+.++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87531 234567999999988877 899999988643321 1122334456788899998753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999986 5788999999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 689998874
No 345
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-35 Score=325.45 Aligned_cols=215 Identities=21% Similarity=0.237 Sum_probs=176.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
-+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467888887763 246999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++.. ...++.++|++|++.+++ .|++||+.|....... ....+.+++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 234567999999998887 8999999986543211 123344556788999998753 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||+|||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 467999999999999999999999999999999999999999999999876 699999999986 5788899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 6 789999875
No 346
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=324.18 Aligned_cols=211 Identities=21% Similarity=0.289 Sum_probs=176.3
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++. + ..||||++++|+++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 567888887741 1 238999999999999999999999999999999876 56899999998754
Q ss_pred hh-hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 936 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..+++++++++.+++.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 31 22456999999999999899999998753211 111 1234556899999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998754 899999999987 47788999999986 789999874
No 347
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=6.8e-35 Score=319.91 Aligned_cols=195 Identities=24% Similarity=0.335 Sum_probs=163.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1226)
.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 16 QALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 4999999999999999999999999999999999999988 999999999875432 1357999999988889
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.+.....+... ++....++.+++.+||.+..++.+
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 135 (222)
T PRK10908 93 DRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP--- 135 (222)
T ss_pred cccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc---
Confidence 9999999998654322100 001123456788899987665543
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||++++.+|++|+|||||+|||+.+...+.+.|+++.+ . +++|+.++|+..++...+|+|++|+
T Consensus 136 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 211 (222)
T PRK10908 136 --IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTLS 211 (222)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4556667888899999999999999
Q ss_pred CCeEE
Q 000913 400 DGQIV 404 (1226)
Q Consensus 400 ~G~iv 404 (1226)
+|+++
T Consensus 212 ~G~i~ 216 (222)
T PRK10908 212 DGHLH 216 (222)
T ss_pred CCEEc
Confidence 99985
No 348
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=4e-35 Score=342.42 Aligned_cols=194 Identities=23% Similarity=0.376 Sum_probs=169.3
Q ss_pred cccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hhhcceeeEeecCCCCCCCCCH
Q 000913 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1226)
Q Consensus 886 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 958 (1226)
|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999876 468999999987532 1345679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000913 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1226)
Q Consensus 959 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1226)
+||+.|+.... ...+.+++++++++.++|.+..++.+ ..|||||||||+||+||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 12334556889999999988887764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |++++.|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999765 899999999987 57888999999986 789999874
No 349
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-35 Score=324.44 Aligned_cols=203 Identities=26% Similarity=0.341 Sum_probs=167.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC------C---CccceEEEecCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE------F---VPQRTAAYISQHDN 236 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~------~---~~~~~~~yv~Q~d~ 236 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 4999999999999999999999999999999999999988 9999999987631 1 11357999999998
Q ss_pred CCCCCCHHHHHHHH-hHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 237 HIGEMTVRETLAFS-ARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
+++.+||+||+.+. ....+... .+....++.+++.+||+...+..
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 99999999999753 22211100 00112356778899998766654
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
+ +.|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++.. .+ ++|+.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TG-ITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEE
Confidence 4 46999999999999999999999999999999999999999999998753 34 45556778888999999999
Q ss_pred EEEcCCeEEEecChhHH
Q 000913 396 ILLSDGQIVYQGPRELV 412 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~ 412 (1226)
++|.+|++++.|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999988764
No 350
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-35 Score=325.06 Aligned_cols=215 Identities=21% Similarity=0.290 Sum_probs=175.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
.++++|+++.++ ++.+|+|+||+|++||+++|+|||||||||||++|+|..... +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 377889988773 235999999999999999999999999999999999965311 2579999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ...++.++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 234567999999988877 8999999986543211 123344566888899988753 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999985 4899999999986 4788899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 688888864
No 351
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6e-35 Score=313.12 Aligned_cols=190 Identities=49% Similarity=0.849 Sum_probs=162.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCC--CCceEEEEEEEcCc
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGNITISGY 932 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~--~~~~~~G~i~i~g~ 932 (1226)
.++++|+++.++.... ...+.+|+|+|+++++|++++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 4788999988752100 01246999999999999999999999999999999999987 5 56899999998
Q ss_pred cCChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000913 933 PKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1226)
Q Consensus 933 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGq 1012 (1226)
+......++.++|++|++.+++.+|++||+.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8765445677999999998888899999998642110 399999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999777999999999987567888999999986 6877654
No 352
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-36 Score=334.12 Aligned_cols=255 Identities=24% Similarity=0.336 Sum_probs=200.3
Q ss_pred hhHHHHHHhhhccccChHHHHHHHHHHhhhcCCC-CCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhc
Q 000913 80 ERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGID-LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRII 158 (1226)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 158 (1226)
+...-+|+.++..+...+ +.++.+...+. .-...|.|+|+++.+++
T Consensus 228 q~ltdme~mfdLl~~~~~-----v~d~pda~~L~~~~~g~v~F~~V~F~y~~---------------------------- 274 (497)
T COG5265 228 QALTDMEKMFDLLDVEAE-----VSDAPDAPPLWPVRLGAVAFINVSFAYDP---------------------------- 274 (497)
T ss_pred HhhhhHHHHHHhhccchh-----hccCCCCccccccccceEEEEEEEeeccc----------------------------
Confidence 344445555555555554 44555444443 33567999999999864
Q ss_pred CCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCCC
Q 000913 159 PSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHD 235 (1226)
Q Consensus 159 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~---~~~~~~yv~Q~d 235 (1226)
.++||+++|+.+++|++++++||+|+||||++++|-++++++ +|.|+++|+++.+.. .++.||.|||+.
T Consensus 275 -----~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~---sG~I~id~qdir~vtq~slR~aIg~VPQDt 346 (497)
T COG5265 275 -----RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVN---SGSITIDGQDIRDVTQQSLRRAIGIVPQDT 346 (497)
T ss_pred -----cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCc---CceEEEcchhHHHhHHHHHHHHhCcCcccc
Confidence 234999999999999999999999999999999999999999 999999999986654 357899999965
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
++| +.|+..|+.|+. +....+....+++..+.. .. +..|++.+||.
T Consensus 347 vLF-NDti~yni~ygr----~~at~eev~aaa~~aqi~---------------------------~f--i~~lP~gy~t~ 392 (497)
T COG5265 347 VLF-NDTIAYNIKYGR----PDATAEEVGAAAEAAQIH---------------------------DF--IQSLPEGYDTG 392 (497)
T ss_pred eeh-hhhHHHHHhccC----ccccHHHHHHHHHHhhhh---------------------------HH--HHhCchhhhcc
Confidence 555 569999999875 223333333222222111 11 33589999999
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
||+++.+ |||||||||+|||+++.+|+||++||.||+||+.|.+.|...|+..+ .++|+++.. |+..+.--+|.|
T Consensus 393 Vgerglk-lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~--~~rttlvia--hrlsti~~adei 467 (497)
T COG5265 393 VGERGLK-LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVS--AGRTTLVIA--HRLSTIIDADEI 467 (497)
T ss_pred cchheee-ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh--CCCeEEEEe--ehhhhccCCceE
Confidence 9999997 99999999999999999999999999999999999999999999876 345554433 466777789999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000913 396 ILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1226)
+||++|+|++.|++++++.
T Consensus 468 ivl~~g~i~erg~h~~ll~ 486 (497)
T COG5265 468 IVLDNGRIVERGTHEELLA 486 (497)
T ss_pred EEeeCCEEEecCcHHHHHH
Confidence 9999999999999999975
No 353
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=341.52 Aligned_cols=190 Identities=23% Similarity=0.379 Sum_probs=167.4
Q ss_pred cccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hhhcceeeEeecCCCCCCCCCH
Q 000913 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1226)
Q Consensus 886 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 958 (1226)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+|||+|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 568999999976532 2245679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000913 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1226)
Q Consensus 959 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1226)
+||+.|+.. ...+++++++++.++|.+..++.+ ..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988532 112346889999999988877764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999998765 899999999986 58889999999986 799999975
No 354
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=327.14 Aligned_cols=204 Identities=28% Similarity=0.398 Sum_probs=168.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC--C---ccceEEEecCCCC-CCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--V---PQRTAAYISQHDN-HIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~--~---~~~~~~yv~Q~d~-~~~ 239 (1226)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++... . .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 4999999999999999999999999999999999999998 99999999987421 1 2357999999853 345
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+||+||+.|+....+.. . .+....+..+++.+||.+..++.+
T Consensus 93 ~~tv~e~i~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~--- 135 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLS-K---------------------------------EEVEKRVKEALKAVGMEGFENKPP--- 135 (275)
T ss_pred cccHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCchhhcCCh---
Confidence 679999998764221110 0 001123566888999987777654
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
+.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+ . +++|+.++|+..++.+++|++++|+
T Consensus 136 --~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 136 --HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998764 3 4555667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998874
No 355
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-34 Score=319.99 Aligned_cols=205 Identities=28% Similarity=0.338 Sum_probs=171.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-ccceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-PQRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
++|+|+|+.++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.... .++.++|++|++..++.+||+
T Consensus 14 ~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 14 VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 4999999999999999999999999999999999999998 999999999876533 246799999998888899999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.++....+... ......++.+++.+||++..++.+ ..|
T Consensus 91 ~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (232)
T cd03300 91 ENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQL 131 (232)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hhC
Confidence 99988654322100 001123567888999987766554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++....+.|+ +.++|+..++.+++|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~ti-ii~sh~~~~~~~~~d~i~~l~~G~~~ 210 (232)
T cd03300 132 SGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITF-VFVTHDQEEALTMSDRIAVMNKGKIQ 210 (232)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEE-EEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998765334454 44677778899999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (232)
T cd03300 211 QIGTPEEIY 219 (232)
T ss_pred ecCCHHHHH
Confidence 999887663
No 356
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=9.5e-35 Score=320.13 Aligned_cols=197 Identities=27% Similarity=0.332 Sum_probs=162.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5999999999999999999999999999999999999998 9999999998765432 24699999998889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+.+||+||+.+.....+.. . .+....++.+++.+||.+..+..+
T Consensus 101 ~~~tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 144 (228)
T PRK10584 101 PTLNALENVELPALLRGES-S---------------------------------RQSRNGAKALLEQLGLGKRLDHLP-- 144 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCCHhHhhCCh--
Confidence 9999999998865332110 0 001123567788999987666554
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|++++...+.| |+.++|+..++ +.+|++++|
T Consensus 145 ---~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~t-ii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 145 ---AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTT-LILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999876533444 44466776666 559999999
Q ss_pred cCCeEEEe
Q 000913 399 SDGQIVYQ 406 (1226)
Q Consensus 399 ~~G~iv~~ 406 (1226)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 357
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=327.61 Aligned_cols=204 Identities=27% Similarity=0.373 Sum_probs=167.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC--C---CccceEEEecCCCC-CCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--F---VPQRTAAYISQHDN-HIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~--~---~~~~~~~yv~Q~d~-~~~ 239 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++||+|++. .++
T Consensus 15 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 15 PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 3899999999999999999999999999999999999998 9999999998742 1 11357999999864 345
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
..|+.||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 92 ~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI--- 134 (271)
T ss_pred cccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc---
Confidence 6789999988643321100 001123466788899987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.. .+ ++||.++|+..++.+++|++++|+
T Consensus 135 --~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l~ 210 (271)
T PRK13638 135 --QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVLR 210 (271)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998764 34 455667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (271)
T PRK13638 211 QGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 358
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-35 Score=329.83 Aligned_cols=207 Identities=26% Similarity=0.342 Sum_probs=168.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCCCC-CCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1226)
++|+|||++|++|++++|+||||||||||+++|+|.++|+...+|+|+++|.++.... .++.++||+|++. .++.+
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 4899999999999999999999999999999999999887112399999999876432 2357999999864 67789
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
||+||+.|..+..+.. .++....++.+++.+||++..++. +
T Consensus 101 tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~-----~ 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSE-----P 141 (282)
T ss_pred CHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCC-----c
Confidence 9999998865332110 001122456778899998766654 4
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++....+.| |+.++|+..++ ..+|++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-vli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLT-VISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999999999876533445 44466676776 579999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
++++.|+++++.
T Consensus 220 ~i~~~g~~~~~~ 231 (282)
T PRK13640 220 KLLAQGSPVEIF 231 (282)
T ss_pred EEEEeCCHHHHh
Confidence 999999998874
No 359
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-35 Score=325.25 Aligned_cols=218 Identities=18% Similarity=0.243 Sum_probs=174.2
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcCcc
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISGYP 933 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g~~ 933 (1226)
+++|+++.++ .+.+|+|+||++++||+++|+|+||||||||+++|+|.... . +.+|+|.++|.+
T Consensus 7 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~ 73 (251)
T PRK14244 7 SVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGID 73 (251)
T ss_pred EeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEe
Confidence 4677777663 24699999999999999999999999999999999997541 1 358999999987
Q ss_pred CCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000913 934 KKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1226)
Q Consensus 934 ~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~L 1008 (1226)
+.. ..+++.++|++|++.+++. ||+||+.+....+.. .......++.++++++.+++.+........ .+..|
T Consensus 74 i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~L 150 (251)
T PRK14244 74 VYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFEL 150 (251)
T ss_pred hHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhC
Confidence 532 1345679999999887775 999999886433311 112233445678899999986522111111 14579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 000913 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1226)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~ 1088 (1226)
|||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |+++
T Consensus 151 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~ 227 (251)
T PRK14244 151 SGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIV 227 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999985 4899999999987 57788999999986 6899
Q ss_pred EeCCC
Q 000913 1089 YVGPL 1093 (1226)
Q Consensus 1089 y~G~~ 1093 (1226)
+.|+.
T Consensus 228 ~~~~~ 232 (251)
T PRK14244 228 EYNTT 232 (251)
T ss_pred EeCCH
Confidence 88874
No 360
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-35 Score=324.58 Aligned_cols=218 Identities=23% Similarity=0.317 Sum_probs=176.0
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1226)
++++|+++.++ ++.+|+|+||++++||+++|+|+|||||||||++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888888763 246899999999999999999999999999999999975421 25899999998
Q ss_pred cCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000913 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1226)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1226)
++.. ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+..... .+.+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNK-PGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhC-Chhh
Confidence 7532 234567999999998887 899999988653321 112233445678889999886421111111 1467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1008 LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999986 47888999999986 688
Q ss_pred EEeCCC
Q 000913 1088 IYVGPL 1093 (1226)
Q Consensus 1088 ~y~G~~ 1093 (1226)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 888874
No 361
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=323.88 Aligned_cols=212 Identities=24% Similarity=0.288 Sum_probs=168.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCCC---ccceEEEecCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGE 240 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~~---~~~~~~yv~Q~d~~~~~ 240 (1226)
.+|+|+|+.|++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 4999999999999999999999999999999999998741 012899999999875432 23579999999888999
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000913 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1226)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1226)
+||+||+.++.+..+..... .+....++.+++.+||.+..+.. -+..
T Consensus 97 ~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~~~ 143 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKSK--------------------------------KELQERVRWALEKAQLWDEVKDR-LDAP 143 (250)
T ss_pred CcHHHHHHHHHHhccccCCH--------------------------------HHHHHHHHHHHHHcCCCcchhhh-hcCC
Confidence 99999999875432110000 00112356678888885421111 1234
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+++|+|++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--KD-MTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 55799999999999999999999999999999999999999999999874 24 4566677888889999999999999
Q ss_pred CeEEEecChhHHH
Q 000913 401 GQIVYQGPRELVL 413 (1226)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1226)
|++++.|+.+++.
T Consensus 221 G~i~~~g~~~~~~ 233 (250)
T PRK14247 221 GQIVEWGPTREVF 233 (250)
T ss_pred CeEEEECCHHHHH
Confidence 9999999988764
No 362
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=334.42 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=168.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++.++
T Consensus 96 ~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~ 175 (329)
T PRK14257 96 HVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF 175 (329)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC
Confidence 4999999999999999999999999999999999998631 01289999999998532 2356799999988766
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
..||+||+.|+....+... .+ .....+..+++.++|.+..++.++.
T Consensus 176 -~~ti~eNi~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~~ 221 (329)
T PRK14257 176 -EMSIFDNVAYGPRNNGIND-RK--------------------------------ILEKIVEKSLKSAALWDEVKDDLDK 221 (329)
T ss_pred -CCcHHHHHHhHHHhcCCCh-HH--------------------------------HHHHHHHHHHHHcCCcchhhhhhhC
Confidence 5899999998754321100 00 0111234556777776555566654
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
....|||||||||+||||++.+|+||+|||||+|||+.+...+.++|+++.+ + .+|+.++|....+.+.+|+|++|
T Consensus 222 -~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driivl 297 (329)
T PRK14257 222 -AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVFF 297 (329)
T ss_pred -CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 4557999999999999999999999999999999999999999999998753 3 45666788888889999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+++++.
T Consensus 298 ~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 298 YQGWIEEAGETKTIF 312 (329)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999874
No 363
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=9.2e-35 Score=323.45 Aligned_cols=212 Identities=26% Similarity=0.333 Sum_probs=168.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|++|++.+++
T Consensus 14 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (243)
T TIGR01978 14 EILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEIP 90 (243)
T ss_pred EEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccccC
Confidence 4999999999999999999999999999999999995 566 9999999998765432 234899999999999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-cccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMVGD 318 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg~ 318 (1226)
.+|++|++.+.......... . ... ...+....++.+++.+||+. ..++.++
T Consensus 91 ~~t~~~~~~~~~~~~~~~~~----------~--------~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~- 142 (243)
T TIGR01978 91 GVSNLEFLRSALNARRSARG----------E--------EPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN- 142 (243)
T ss_pred CcCHHHHHHHHHHHhhcccc----------c--------ccc---------cHHHHHHHHHHHHHHcCCchhhcccccc-
Confidence 99999999886532110000 0 000 00011234577889999973 4554432
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhh-cCcEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL-FDDIIL 397 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~-~D~iil 397 (1226)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++||.++|+..++... +|++++
T Consensus 143 ---~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~~~~d~i~~ 217 (243)
T TIGR01978 143 ---EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNYIKPDYVHV 217 (243)
T ss_pred ---cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHhhcCCeEEE
Confidence 14999999999999999999999999999999999999999999998754 34 4555577788888888 899999
Q ss_pred EcCCeEEEecChhHHH
Q 000913 398 LSDGQIVYQGPRELVL 413 (1226)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1226)
|++|++++.|+++++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 218 LLDGRIVKSGDVELAK 233 (243)
T ss_pred EeCCEEEEecCHHHhc
Confidence 9999999999988653
No 364
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=325.77 Aligned_cols=216 Identities=21% Similarity=0.286 Sum_probs=177.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc-e--EEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~--~~G~i~i~g 931 (1226)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478899988774 246999999999999999999999999999999999976532 2 479999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++ .||+||+.+....+. ..+..+.++.+.++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999988654332 1223334456788899998843 33332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 467999999999999999999999999999999999999999999999865 699999999997 5888999999998
Q ss_pred c----CcEEEEeCCC
Q 000913 1083 R----GGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~----Gg~~~y~G~~ 1093 (1226)
. .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 4 4899999975
No 365
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=7.4e-35 Score=319.09 Aligned_cols=211 Identities=23% Similarity=0.336 Sum_probs=176.3
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.+... .+.+.+|+|+||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5678888776311 012579999999999999999999999999999999999876 56899999998753
Q ss_pred h------hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000913 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LS 1009 (1226)
. ...++.++|++|++.+++.+|+.||+.+...... ....++..+.+.++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 2 1345679999999988888999999998654321 123444556789999999998777765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
+|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ +|+|||+++|+++ +.+.+|++++|++ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 5899999999985 4689999999986 443
No 366
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1e-33 Score=361.20 Aligned_cols=211 Identities=25% Similarity=0.369 Sum_probs=177.6
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++++||+|.|+. ++.+|+|+|++|+||+.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 46999999999852 2358999999999999999999999999999999999877 568999999987
Q ss_pred CC---hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
+. ...+++.+|||+|++.+++. |++||+.++. .++.+. +.++++++..++.+.. |+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~----~~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGA----KENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehhH-HHHHHHhccC----CCCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 64 34677889999999988764 9999998752 112232 3467777777775533 4556554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4679999999999999999999999999999999999999999999985 4899999999986 5678999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 799999974
No 367
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-35 Score=329.91 Aligned_cols=216 Identities=24% Similarity=0.303 Sum_probs=180.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++.. ....+|+|||+++++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47889999887421 12358999999999999999999999999999999999876 5689999999876
Q ss_pred Ch---hhhcceeeEeecCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ...++.+||++|++. .++..||.||+.+..... ....++..++++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234667999999974 566789999998764322 123444456788999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 9999999999874 4 46999999986 68888
Q ss_pred eCCC
Q 000913 1090 VGPL 1093 (1226)
Q Consensus 1090 ~G~~ 1093 (1226)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8874
No 368
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-35 Score=345.12 Aligned_cols=213 Identities=26% Similarity=0.419 Sum_probs=181.3
Q ss_pred CCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000913 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1226)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1226)
++..++.+|++|.++. .+++++|+|+++++|+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 4556777799998863 2379999999999999999999999999999999999987 4689999999
Q ss_pred ccC---ChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccccc------ccCC
Q 000913 932 YPK---KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS------LVGL 1002 (1226)
Q Consensus 932 ~~~---~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~------~~g~ 1002 (1226)
.+. +...+++.++||+|++.+++ -|++||+.++. .+.+ ++.+.++++..+|.++.+. .+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 875 44678899999999998876 59999999852 1222 3447888898888876654 3343
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+.++|||||+|||++||||+.+++++++||||++||.++.+.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4578999999999999999999999999999999999999999999999986 599999999975 567789999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 6 789998874
No 369
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=325.26 Aligned_cols=221 Identities=20% Similarity=0.261 Sum_probs=178.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
.++++|+++.+. ...+|+|+||++++|+++||+|+||||||||+++|+|...+. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 488999998874 235899999999999999999999999999999999986531 1369999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.++.. ...++.++|++|++.+++ .|++||+.+....... .+..+..+.+.++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87521 234567999999988887 8999999886433211 12233445688899999986432222222 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecC-
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1084 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~G- 1084 (1226)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++. +|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999864 4899999999987 588899999999864
Q ss_pred ---cEEEEeCCC
Q 000913 1085 ---GQEIYVGPL 1093 (1226)
Q Consensus 1085 ---g~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 799999875
No 370
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.1e-34 Score=318.34 Aligned_cols=196 Identities=26% Similarity=0.341 Sum_probs=166.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+|
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 14 TAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 4999999999999999999999999999999999999998 999999998765322 357999999988899999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000913 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1226)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1226)
|+.+.....+.. ...+..+++.+||++..|..+ ..||
T Consensus 90 ~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~LS 126 (223)
T TIGR03740 90 NLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKA-----KQFS 126 (223)
T ss_pred HHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhH-----hhCC
Confidence 998765332100 012455678899987666544 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEE
Q 000913 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1226)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1226)
||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+.| |+.++|+..++.+.+|+|++|++|++++
T Consensus 127 ~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~t-iii~sH~~~~~~~~~d~i~~l~~g~i~~ 204 (223)
T TIGR03740 127 LGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGIT-VILSSHILSEVQQLADHIGIISEGVLGY 204 (223)
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCE-EEEEcCCHHHHHHhcCEEEEEeCCEEEE
Confidence 9999999999999999999999999999999999999999998754 3444 5556777888999999999999999999
Q ss_pred ecChh
Q 000913 406 QGPRE 410 (1226)
Q Consensus 406 ~G~~~ 410 (1226)
.|++.
T Consensus 205 ~~~~~ 209 (223)
T TIGR03740 205 QGKIN 209 (223)
T ss_pred ecChh
Confidence 99865
No 371
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.6e-35 Score=374.76 Aligned_cols=257 Identities=24% Similarity=0.378 Sum_probs=197.0
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.++++..++|+.++++.+++. +..+....+.....++|+||++.++.
T Consensus 421 ~~~~~~~~~ri~~~l~~~~e~------~~~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 467 (694)
T TIGR01846 421 FQQTGIALERLGDILNSPTEP------RSAGLAALPELRGAITFENIRFRYAP--------------------------- 467 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCc------cCCCCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 568888899999888776651 00011111222457999999999842
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
..+.+|+|+|+.++||+.++|+|+||||||||+++|+|.++|+ +|+|++||++++++.. ++.++||+|+
T Consensus 468 -----~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~ 539 (694)
T TIGR01846 468 -----DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQE 539 (694)
T ss_pred -----CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccC
Confidence 1124899999999999999999999999999999999999998 9999999999887654 4689999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.++ +.|++|||.++. +....+.+.++++... .++.+ ..|+...||
T Consensus 540 ~~lf-~~ti~eNi~~~~----~~~~~~~i~~a~~~~~---------------------------l~~~i--~~lp~gl~t 585 (694)
T TIGR01846 540 NVLF-SRSIRDNIALCN----PGAPFEHVIHAAKLAG---------------------------AHDFI--SELPQGYNT 585 (694)
T ss_pred Ceeh-hhhHHHHHhcCC----CCCCHHHHHHHHHHcC---------------------------hHHHH--HhCcCccCc
Confidence 6555 579999998753 1112222222222110 11122 246778899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+ .+||||||||++|||||+++|++++|||||++||+.++..+.+.|++.. .+.|+|+ ++|.. +....+|+
T Consensus 586 ~i~~~g-~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~-itH~~-~~~~~~d~ 660 (694)
T TIGR01846 586 EVGEKG-ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC--RGRTVII-IAHRL-STVRACDR 660 (694)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEE-EeCCh-HHHHhCCE
Confidence 999865 5799999999999999999999999999999999999999999998863 3456555 45544 45567999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+++++|+++++.+
T Consensus 661 ii~l~~G~i~~~g~~~~l~~ 680 (694)
T TIGR01846 661 IIVLEKGQIAESGRHEELLA 680 (694)
T ss_pred EEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999998864
No 372
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.4e-35 Score=316.69 Aligned_cols=195 Identities=24% Similarity=0.366 Sum_probs=162.7
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000913 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1226)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1226)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999998 9999999998755432 357999999998899999999998
Q ss_pred HHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhH
Q 000913 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1226)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1226)
++..... ... . +....++.+++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~-~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KLT-----A----------------------------EDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-Ccc-----H----------------------------HHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7642110 000 0 01123567888999987666554 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEec
Q 000913 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1226)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1226)
|||++||++++.+|++++|||||+|||..++..+.+.|+++.... +.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999876433 445555788889999999999999999998764
No 373
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=323.31 Aligned_cols=219 Identities=22% Similarity=0.245 Sum_probs=175.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467888887763 246999999999999999999999999999999999976521 3579999999
Q ss_pred ccCC----hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000913 932 YPKK----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1226)
Q Consensus 932 ~~~~----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1226)
.++. ....++.++|++|++.+++ .||.||+.+...... ....+..++.+.++++.+++.+........ .+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 8753 1234567999999998887 899999987643221 112233445678888888875321111111 1457
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1008 LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 699999999987 57888999999986 789
Q ss_pred EEeCCC
Q 000913 1088 IYVGPL 1093 (1226)
Q Consensus 1088 ~y~G~~ 1093 (1226)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 998874
No 374
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.3e-33 Score=358.40 Aligned_cols=210 Identities=26% Similarity=0.388 Sum_probs=177.3
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++++||+|+|+. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEe
Confidence 46999999999863 12468999999999999999999999999999999999876 568999999988
Q ss_pred CCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
+.+ ..+++.+|||+|++.++. .|++||+.++. ++.+. +.++++++..++.+.. |+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 643 457889999999998875 59999998641 12232 3467788888876543 4455544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999986 4677999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 799999974
No 375
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-35 Score=339.02 Aligned_cols=212 Identities=27% Similarity=0.427 Sum_probs=178.1
Q ss_pred CCceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000913 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1226)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1226)
.+..++|+||+++|. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999999986 23459999999999999999999999999999999998765 589999999
Q ss_pred ccCCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccC
Q 000913 932 YPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVG 1001 (1226)
Q Consensus 932 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g 1001 (1226)
.++++ +.+|+.+||||||..++. -||.+|+.|+. ++.+.+ .|-++.+..++.+.- ++.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 98654 568899999999988775 59999999863 334443 355666666665433 34566
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000913 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1226)
Q Consensus 1002 ~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll 1081 (1226)
..| ..|||||||||+||||++.+|+|+++|||||.||.++...+++.+++. ..|+|+|++.|+.+ ..+.||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l~--ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRLD--LLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecch--hHhcCCEEEEE
Confidence 654 569999999999999999999999999999999999999999999994 45899999999874 68899999999
Q ss_pred ecCcEEEEeCCC
Q 000913 1082 KRGGQEIYVGPL 1093 (1226)
Q Consensus 1082 ~~Gg~~~y~G~~ 1093 (1226)
++ |++...|+-
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 97 678888874
No 376
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=326.54 Aligned_cols=217 Identities=22% Similarity=0.253 Sum_probs=178.2
Q ss_pred CceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEE
Q 000913 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITI 929 (1226)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i 929 (1226)
...++++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|.... .+.+|+|.+
T Consensus 23 ~~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i 89 (272)
T PRK14236 23 QTALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRL 89 (272)
T ss_pred CcEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEE
Confidence 34689999998874 23689999999999999999999999999999999998642 136899999
Q ss_pred cCccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccc
Q 000913 930 SGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLV 1000 (1226)
Q Consensus 930 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~ 1000 (1226)
+|.+... ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+ ..+..
T Consensus 90 ~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~- 165 (272)
T PRK14236 90 DGQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN- 165 (272)
T ss_pred CCEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC-
Confidence 9987642 2346679999999888875 99999988653321 1122233456888999998864 22332
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEE
Q 000913 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1080 (1226)
Q Consensus 1001 g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~l 1080 (1226)
+..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++++ +.|||+++|+++ ++.+.+|++++
T Consensus 166 ----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~ 239 (272)
T PRK14236 166 ----AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAF 239 (272)
T ss_pred ----cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEE
Confidence 457999999999999999999999999999999999999999999999975 799999999986 47788999999
Q ss_pred EecCcEEEEeCCC
Q 000913 1081 MKRGGQEIYVGPL 1093 (1226)
Q Consensus 1081 l~~Gg~~~y~G~~ 1093 (1226)
|++ |++++.|+.
T Consensus 240 l~~-G~i~~~g~~ 251 (272)
T PRK14236 240 MYM-GKLVEYGDT 251 (272)
T ss_pred EEC-CEEEecCCH
Confidence 986 789998874
No 377
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=330.86 Aligned_cols=205 Identities=20% Similarity=0.294 Sum_probs=166.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC----C----CccceEEEecCCCC-
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----F----VPQRTAAYISQHDN- 236 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~----~----~~~~~~~yv~Q~d~- 236 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 4999999999999999999999999999999999999998 9999999987642 1 12357999999863
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000913 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1226)
.+...||+||+.|+....+.. . ++....++.+++.++|+ ...++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN-K---------------------------------QEAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCChhHhcCC
Confidence 233469999999865322110 0 00112345678889995 455544
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++||.++|+..++.+++|+|
T Consensus 148 -----~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 -----PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred -----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999876533 445555788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000913 396 ILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1226)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 378
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.4e-35 Score=357.64 Aligned_cols=218 Identities=26% Similarity=0.330 Sum_probs=183.9
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|++++++ ++.+|+|+||++.+|+++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 78889988773 2469999999999999999999999999999999999876 45899999998753
Q ss_pred h----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 936 Q----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 936 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
. ...++.++|++|++.+++.+||+|++.|+...+.. ...+..+.++++.++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 2 11245699999999888999999999886432210 11223344566889999999988777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
||||||+||++|+.+|++|||||||+|||+.++..+++.|+++.++|.|||+++|++. ++.+.||++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57789999999986 789999
Q ss_pred CCCCc
Q 000913 1091 GPLGR 1095 (1226)
Q Consensus 1091 G~~~~ 1095 (1226)
|+...
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 88653
No 379
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=323.41 Aligned_cols=212 Identities=21% Similarity=0.303 Sum_probs=167.3
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCC--CCC---ccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMD--EFV---PQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~--~~~---~~~~~~yv~Q~d~~~ 238 (1226)
++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ ...+|+|+++|+++. ... .++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 4999999999999999999999999999999999998762 013899999999875 221 235799999999899
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+.+||+||+.++....+..... ++....++.+++.+||....... -+
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSK--------------------------------KELDERVEWALKKAALWDEVKDR-LN 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCH--------------------------------HHHHHHHHHHHHHcCCccchhhh-hc
Confidence 9999999999865432110000 00112345667788874311111 12
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + .+||.++|+..++..++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45556778888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 380
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=326.48 Aligned_cols=209 Identities=24% Similarity=0.372 Sum_probs=170.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1226)
++|+|+||.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 4999999999999999999999999999999999999988 9999999988654322 357999999888889999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|.||+.++.... .... .. . .......++.+++.+||++..++.++
T Consensus 102 v~e~l~~~~~~~-~~~~--------------~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~----- 146 (265)
T PRK10575 102 VRELVAIGRYPW-HGAL--------------GR-F--------------GAADREKVEEAISLVGLKPLAHRLVD----- 146 (265)
T ss_pred HHHHHHhCcccc-cccc--------------cC-C--------------CHHHHHHHHHHHHHcCCHHHhcCCcc-----
Confidence 999998753110 0000 00 0 00011235678889999876666554
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||+||++|+.+|++|||||||+|||..++..+.+.|++++...+ ++|+.++|+..++.+++|+|++|++|+
T Consensus 147 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~-~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 147 SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERG-LTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 6999999999999999999999999999999999999999999998765334 445557788889999999999999999
Q ss_pred EEEecChhHHH
Q 000913 403 IVYQGPRELVL 413 (1226)
Q Consensus 403 iv~~G~~~~~~ 413 (1226)
+++.|+.+++.
T Consensus 226 i~~~~~~~~~~ 236 (265)
T PRK10575 226 MIAQGTPAELM 236 (265)
T ss_pred EEEecCHHHhc
Confidence 99999887653
No 381
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=326.34 Aligned_cols=208 Identities=24% Similarity=0.396 Sum_probs=170.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 21 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 97 (265)
T PRK10253 21 TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDIT 97 (265)
T ss_pred EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCc
Confidence 4999999999999999999999999999999999999988 9999999998754332 356999999988888999
Q ss_pred HHHHHHHHhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000913 243 VRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1226)
Q Consensus 243 V~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1226)
|+||+.++..-. ...... .+.....++.+++.+||++..++. +
T Consensus 98 v~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (265)
T PRK10253 98 VQELVARGRYPHQPLFTRW-------------------------------RKEDEEAVTKAMQATGITHLADQS-----V 141 (265)
T ss_pred HHHHHHhCcccccccccCC-------------------------------CHHHHHHHHHHHHHcCCHHHhcCC-----c
Confidence 999998753100 000000 000112356788899998766654 4
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCC
Q 000913 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1226)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1226)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.... +++||.++|+..++.+++|+|++|++|
T Consensus 142 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 142 DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999876533 445566778888999999999999999
Q ss_pred eEEEecChhHHH
Q 000913 402 QIVYQGPRELVL 413 (1226)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1226)
++++.|+++++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 382
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=322.80 Aligned_cols=207 Identities=22% Similarity=0.315 Sum_probs=164.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCC-----CccceEEEecCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d 235 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++ |+ +|+|.++|+++... ..++.++|++|++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 49999999999999999999999999999999999864 34 89999999887532 1145799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
.+++ .||+||+.|+....+.... + .....++.+++.+||.+...+.
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~ 142 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGVKDK-A--------------------------------YLAERVERSLRHAALWDEVKDR 142 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhhHH
Confidence 7777 5999999987543221100 0 0012345567777875422122
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
. ++.++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+++|+|
T Consensus 143 ~-~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~~d~v 218 (253)
T PRK14242 143 L-HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARVSDVT 218 (253)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHhCCEE
Confidence 2 23456799999999999999999999999999999999999999999999873 24 45555778888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000913 396 ILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1226)
++|++|++++.|+++++.
T Consensus 219 ~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 219 AFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 383
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-35 Score=293.47 Aligned_cols=206 Identities=27% Similarity=0.411 Sum_probs=176.8
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
..+|+|||+.|.+||.++++||||||||||||+++|+.+|. .|+|.+||.+++. |...-|.|+|++.++|.+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 44899999999999999999999999999999999999998 9999999998764 334568999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
+|++|+.++.|.+.. .+ ..++.+.+...||++..+.. +-+|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~~~-----i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEHKY-----IWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCcccccccc-----eEee
Confidence 999999999886421 11 23456778899999776644 4569
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc--CCe
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~--~G~ 402 (1226)
||||||||.|||||..+|+.|+||||+.+||.-|+.++.+.|-++.+..++. ++.++|+..|+.-++++++||+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~-~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQ-VLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCe-EEEEeccHHHHHhhhheeEEecCCCce
Confidence 9999999999999999999999999999999999999999998887755544 5558899999999999999998 589
Q ss_pred EEEecChhHHHHH
Q 000913 403 IVYQGPRELVLEF 415 (1226)
Q Consensus 403 iv~~G~~~~~~~~ 415 (1226)
|+..=+.+-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9987776644433
No 384
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.7e-35 Score=364.98 Aligned_cols=256 Identities=21% Similarity=0.302 Sum_probs=193.7
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.+.+....+|+.++++.+++. .+ +....+....+++|+|+++.++.
T Consensus 280 ~~~~~~a~~ri~~ll~~~~~~-----~~--~~~~~~~~~~~I~~~~v~~~y~~--------------------------- 325 (569)
T PRK10789 280 VERGSAAYSRIRAMLAEAPVV-----KD--GSEPVPEGRGELDVNIRQFTYPQ--------------------------- 325 (569)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cC--CCCCCCCCCCcEEEEEEEEECCC---------------------------
Confidence 566777888888887665431 00 00011112346999999998732
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
.+..+|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++.+... ++.++||+|+
T Consensus 326 -----~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 397 (569)
T PRK10789 326 -----TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQT 397 (569)
T ss_pred -----CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccC
Confidence 1134899999999999999999999999999999999999998 9999999999876543 4679999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.+++ .|++|||.++.. ....+...++.+. .++ +. ....|++..||
T Consensus 398 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~---~~l------------------------~~--~i~~lp~gl~t 443 (569)
T PRK10789 398 PFLFS-DTVANNIALGRP----DATQQEIEHVARL---ASV------------------------HD--DILRLPQGYDT 443 (569)
T ss_pred Ceecc-ccHHHHHhcCCC----CCCHHHHHHHHHH---cCC------------------------HH--HHHhCcCcccc
Confidence 76665 699999987631 1111111211111 000 00 12357788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+. .||||||||++|||+++++|++++|||||++||+.++..+.+.|+++. .++|+|++.|++ +....+|+
T Consensus 444 ~~~~~g~-~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tii~itH~~--~~~~~~d~ 518 (569)
T PRK10789 444 EVGERGV-MLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRTVIISAHRL--SALTEASE 518 (569)
T ss_pred eecCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--hHHHcCCE
Confidence 9998654 699999999999999999999999999999999999999999998853 456666654443 45677999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+++.+|+++++.+
T Consensus 519 i~~l~~G~i~~~g~~~~l~~ 538 (569)
T PRK10789 519 ILVMQHGHIAQRGNHDQLAQ 538 (569)
T ss_pred EEEEeCCEEEEecCHHHHHH
Confidence 99999999999999998864
No 385
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6.1e-35 Score=321.91 Aligned_cols=201 Identities=24% Similarity=0.316 Sum_probs=166.9
Q ss_pred EeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc--eEEEEEEEcCccCChhhh-cceeeEeecCCC--CCCCCC
Q 000913 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGYPKKQETF-ARISGYCEQNDI--HSPFVT 957 (1226)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 957 (1226)
+|+|+|+++++|++++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999987620 168999999987654322 357999999984 556789
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC---cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000913 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN---PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1226)
Q Consensus 958 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~---~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEP 1034 (1226)
+.|++.+....... .....++.++++++.+++. +..+.. +..|||||||||+||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999875433211 1233456688999999997 344444 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1035 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1035 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|+|||+.++..+.+.|+++.++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999987 57788999999986 788888874
No 386
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=319.24 Aligned_cols=204 Identities=27% Similarity=0.422 Sum_probs=171.1
Q ss_pred EeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHHH
Q 000913 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRE 245 (1226)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1226)
+|+|+|++|+||++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998765332 467999999988899999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000913 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1226)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1226)
|+.++....+... .+....+..+++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9988653221100 001123456788899987776654 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEE
Q 000913 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1226)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1226)
|||||||+||+|++.+|++++|||||+|||..++..+.+.|++++...+.| |+.++|+..++.+++|+|++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~t-ili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVT-VLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999876533444 5556777888999999999999999999
Q ss_pred ecChhHHH
Q 000913 406 QGPRELVL 413 (1226)
Q Consensus 406 ~G~~~~~~ 413 (1226)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 387
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=322.30 Aligned_cols=216 Identities=23% Similarity=0.277 Sum_probs=175.5
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCce---EEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~---~~G~i~i~g 931 (1226)
.+.++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 467888887763 2469999999999999999999999999999999999865322 379999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 2345679999999999998999999987643221 1122333455677777777642 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 689998874
No 388
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-35 Score=358.71 Aligned_cols=218 Identities=25% Similarity=0.302 Sum_probs=183.1
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+||||++++||++||+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 378899988763 2469999999999999999999999999999999999876 4689999999876
Q ss_pred Chh----hhcceeeEeecCCCCCCCCCHHHHHHHHHHhh----cCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 935 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLR----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
... ..++.+|||+|++.+++.+||+||+.++.... .....+.++.+++++++++.++|.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 421 12356999999998889999999998753211 1001123344567889999999988777764 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
+|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|++. .+.+.||++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999888999999999986 47788999999986 78
Q ss_pred EEEeCCCC
Q 000913 1087 EIYVGPLG 1094 (1226)
Q Consensus 1087 ~~y~G~~~ 1094 (1226)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 99999864
No 389
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=332.80 Aligned_cols=222 Identities=18% Similarity=0.220 Sum_probs=179.7
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 930 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 930 (1226)
..++++|+++.++. +.+.+|+||||+|++||++||+|+|||||||||++|+|.... .+.+|+|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 36899999988752 124699999999999999999999999999999999997541 2457999999
Q ss_pred CccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000913 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1226)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1226)
|.++.. ...++.++||+|++.+++ .|++||+.|+.... ...+.+..++.+.++++.++|.+-.+..++.. +
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~--~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN--GINDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc--CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 998742 235677999999998775 79999999864322 11112223445778899988754323333332 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 699999999987 47778999999986 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
+++..|++
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999985
No 390
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=319.58 Aligned_cols=201 Identities=22% Similarity=0.382 Sum_probs=167.9
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000913 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1226)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1226)
|||+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999998 9999999998764332 357999999998999999999998
Q ss_pred HHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhH
Q 000913 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1226)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1226)
++.... .... . .....++.+++.+||++..++.+ +.|||||
T Consensus 94 ~~~~~~-~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 134 (232)
T PRK10771 94 LGLNPG-LKLN-----A----------------------------AQREKLHAIARQMGIEDLLARLP-----GQLSGGQ 134 (232)
T ss_pred cccccc-cCCC-----H----------------------------HHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHH
Confidence 753210 0000 0 01123567889999987777655 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecC
Q 000913 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1226)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1226)
||||+||++++.+|++++|||||+|||..++..+.+.|+++.+..+. +||.++|+..++.+++|+|++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~-tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQL-TLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999987653344 45557788889999999999999999999999
Q ss_pred hhHHH
Q 000913 409 RELVL 413 (1226)
Q Consensus 409 ~~~~~ 413 (1226)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88764
No 391
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=333.70 Aligned_cols=217 Identities=18% Similarity=0.189 Sum_probs=171.1
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCCCc-------cceEEEecCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~ 236 (1226)
..+|+|||+.|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 459999999999999999999999999999999999986311 128999999998765432 246999999864
Q ss_pred --CCCCCCHHHHHHHHhHhcCC-CchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000913 237 --HIGEMTVRETLAFSARCQGV-GTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1226)
Q Consensus 237 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1226)
+.+.+||.+++.+....... +... . ...+....+..+|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~-------------~~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------Q-------------RFGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------c-------------cHHHHHHHHHHHHHHCCCCChHH
Confidence 67889999999764321100 0000 0 00011234567899999975321
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcC
Q 000913 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1226)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1226)
+.+..+..|||||||||+||+||+.+|++|||||||+|||+.++.++++.|+++.+ ..+++||.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ-NNNTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCC
Confidence 12344567999999999999999999999999999999999999999999999865 334566668999999999999
Q ss_pred cEEEEcCCeEEEecChhHHH
Q 000913 394 DIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1226)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999998774
No 392
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.4e-34 Score=323.78 Aligned_cols=214 Identities=21% Similarity=0.283 Sum_probs=175.0
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc--eEEEEEEEcC
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISG 931 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~--~~~G~i~i~g 931 (1226)
..++++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3588899988762 24899999999999999999999999999999999987531 1689999999
Q ss_pred ccCChhhh-cceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc---ccccccCCCCC
Q 000913 932 YPKKQETF-ARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP---LRQSLVGLPGV 1005 (1226)
Q Consensus 932 ~~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~~g~~~~ 1005 (1226)
.++..... ++.++||+|++. +.+..|+.+++.+.+.... ... .++.++++++.++|.+ ..+.. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87643222 356999999974 4466899998876433221 111 2256789999999976 33443 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999986 47788999999986
Q ss_pred cEEEEeCCC
Q 000913 1085 GQEIYVGPL 1093 (1226)
Q Consensus 1085 g~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 689998874
No 393
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8e-35 Score=316.85 Aligned_cols=194 Identities=31% Similarity=0.459 Sum_probs=159.8
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC-CCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGE 240 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1226)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 45999999999999999999999999999999999999998 9999999988754321 357999999864 4678
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000913 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1226)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1226)
+||+||+.++....+... .+....++.+++.+||++..+..+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999988653221100 001123566788899986666544
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++..++|+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998765 3 44566678888899999999999999
Q ss_pred Ce
Q 000913 401 GQ 402 (1226)
Q Consensus 401 G~ 402 (1226)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 394
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.3e-34 Score=324.87 Aligned_cols=215 Identities=24% Similarity=0.261 Sum_probs=175.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 933 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 933 (1226)
.++++|+++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 478899988774 2359999999999999999999999999999999999876 468999999986
Q ss_pred ----CCh---hh----hcceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000913 934 ----KKQ---ET----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSL 999 (1226)
Q Consensus 934 ----~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 999 (1226)
+.. .. .++.++|++|++. +.+.+|+.|++.+...... .....+.+..+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 432 11 2346999999974 5677899999876432111 1122334556789999999963 45544
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeE
Q 000913 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1226)
Q Consensus 1000 ~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v 1078 (1226)
+..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998764 899999999986 466789999
Q ss_pred EEEecCcEEEEeCCC
Q 000913 1079 FLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1079 ~ll~~Gg~~~y~G~~ 1093 (1226)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799999874
No 395
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=324.60 Aligned_cols=208 Identities=26% Similarity=0.404 Sum_probs=169.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1226)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|+..+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (255)
T PRK11231 16 RILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGIT 92 (255)
T ss_pred EEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCcc
Confidence 4999999999999999999999999999999999999988 9999999987654322 356999999988888899
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|.||+.|+..-.. ... ... ..+....++.+++.+||++..++.+ .
T Consensus 93 v~~~i~~~~~~~~--~~~-------------~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 137 (255)
T PRK11231 93 VRELVAYGRSPWL--SLW-------------GRL---------------SAEDNARVNQAMEQTRINHLADRRL-----T 137 (255)
T ss_pred HHHHHHhccchhh--hhc-------------cCC---------------CHHHHHHHHHHHHHcCCHHHHcCCc-----c
Confidence 9999988631000 000 000 0001123567788999987666654 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.|+++.. .+ ++|+.++|+..++.+++|++++|++|+
T Consensus 138 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~-~tiii~tH~~~~~~~~~d~i~~l~~G~ 215 (255)
T PRK11231 138 DLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-QG-KTVVTVLHDLNQASRYCDHLVVLANGH 215 (255)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHhcCEEEEEECCe
Confidence 6999999999999999999999999999999999999999999998754 34 455557788889999999999999999
Q ss_pred EEEecChhHHH
Q 000913 403 IVYQGPRELVL 413 (1226)
Q Consensus 403 iv~~G~~~~~~ 413 (1226)
+++.|+.+++.
T Consensus 216 i~~~~~~~~~~ 226 (255)
T PRK11231 216 VMAQGTPEEVM 226 (255)
T ss_pred EEEEcCHHHhc
Confidence 99999987653
No 396
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=322.65 Aligned_cols=219 Identities=20% Similarity=0.238 Sum_probs=175.0
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
.++++|+++.+. ++.+|+|+|++|.+|++++|+||||||||||+++|+|...+. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 377888888763 245999999999999999999999999999999999986521 2369999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.++.. ..+++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHK-SGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhC-Ccc
Confidence 87532 2346779999999988875 999999987543321 11223345577788888875321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999987 47788999999985 68
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9998874
No 397
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.3e-34 Score=318.75 Aligned_cols=205 Identities=27% Similarity=0.410 Sum_probs=170.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1226)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 4999999999999999999999999999999999999988 9999999998765433 36799999998888899999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000913 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1226)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1226)
||+.+.....+... . .....++.+++.+++....++.+ +.|
T Consensus 91 enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (237)
T TIGR00968 91 DNIAFGLEIRKHPK--A--------------------------------KIKARVEELLELVQLEGLGDRYP-----NQL 131 (237)
T ss_pred HHHHhHHHhcCCCH--H--------------------------------HHHHHHHHHHHHcCCHhHhhCCh-----hhC
Confidence 99988654321100 0 00123456788889976666544 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEE
Q 000913 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1226)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1226)
|||||||++||++|+.+|++++|||||+|||..+...+.+.|+++.. ..+.+|+.++|...++.+++|+|++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~ 210 (237)
T TIGR00968 132 SGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKIE 210 (237)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998754 32344445677778899999999999999999
Q ss_pred EecChhHHH
Q 000913 405 YQGPRELVL 413 (1226)
Q Consensus 405 ~~G~~~~~~ 413 (1226)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (237)
T TIGR00968 211 QIGSPDEVY 219 (237)
T ss_pred EecCHHHHH
Confidence 999988764
No 398
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=339.45 Aligned_cols=195 Identities=24% Similarity=0.360 Sum_probs=168.3
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-------CccceEEEecCCCCCCCCCC
Q 000913 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1226)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999998 99999999886431 12467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+||+.|+.+.. ....++.+++.+||++..+..+ .
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999999864200 0113466788999987766554 5
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999886533 4455667888899999999999999999
Q ss_pred EEEecChhHHH
Q 000913 403 IVYQGPRELVL 413 (1226)
Q Consensus 403 iv~~G~~~~~~ 413 (1226)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999874
No 399
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.2e-34 Score=315.79 Aligned_cols=201 Identities=23% Similarity=0.294 Sum_probs=172.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+++|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 488899987763 2369999999999999999999999999999999999876 4689999999876
Q ss_pred ChhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
.....++.++|++|++.+++.+|++||+.+....+. .. .++.++++++.++|.+..+..+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999988888999999988654321 11 2345678899999987777663 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999987 5889999999986
No 400
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=325.27 Aligned_cols=215 Identities=24% Similarity=0.320 Sum_probs=170.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--------ccceEEEecCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--------PQRTAAYISQHDNH 237 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~--------~~~~~~yv~Q~d~~ 237 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+...+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (262)
T PRK09984 18 QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNL 97 (262)
T ss_pred EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEcccccc
Confidence 4999999999999999999999999999999999999875223699999998864321 13569999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
++.+||+||+.++..... . ..... ... ...+....++.+++.+||++..|..+
T Consensus 98 ~~~~tv~e~l~~~~~~~~--~-------~~~~~--~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~- 150 (262)
T PRK09984 98 VNRLSVLENVLIGALGST--P-------FWRTC--FSW---------------FTREQKQRALQALTRVGMVHFAHQRV- 150 (262)
T ss_pred ccCCcHHHHHHhhhcccc--c-------chhhh--ccc---------------ccHHHHHHHHHHHHHcCCHHHHhCCc-
Confidence 999999999987642100 0 00000 000 00011234577899999987666554
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEE
Q 000913 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1226)
..|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+.. +++||.++|+..++.+++|+|++
T Consensus 151 ----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~~ 225 (262)
T PRK09984 151 ----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIVA 225 (262)
T ss_pred ----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 4699999999999999999999999999999999999999999999986533 45556678888889999999999
Q ss_pred EcCCeEEEecChhHH
Q 000913 398 LSDGQIVYQGPRELV 412 (1226)
Q Consensus 398 L~~G~iv~~G~~~~~ 412 (1226)
|++|++++.|+++++
T Consensus 226 l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 226 LRQGHVFYDGSSQQF 240 (262)
T ss_pred EECCEEEEeCCHHHh
Confidence 999999999998764
No 401
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.7e-34 Score=323.71 Aligned_cols=207 Identities=29% Similarity=0.416 Sum_probs=169.3
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 15 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (256)
T TIGR03873 15 LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLT 91 (256)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 346999999987788899
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+||+.++..... ... . .+ ..+....++.+++.+||.+..++.+ .
T Consensus 92 v~e~l~~~~~~~~---------~~~------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 136 (256)
T TIGR03873 92 VRDVVALGRIPHR---------SLW------A-GD--------------SPHDAAVVDRALARTELSHLADRDM-----S 136 (256)
T ss_pred HHHHHHhcchhhh---------hhc------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCc-----c
Confidence 9999988531000 000 0 00 0001123567788999976666554 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+ ++||.++|+..++.+++|+|++|++|+
T Consensus 137 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (256)
T TIGR03873 137 TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-TG-VTVVAALHDLNLAASYCDHVVVLDGGR 214 (256)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 6999999999999999999999999999999999999999999998753 34 456667888889999999999999999
Q ss_pred EEEecChhHH
Q 000913 403 IVYQGPRELV 412 (1226)
Q Consensus 403 iv~~G~~~~~ 412 (1226)
+++.|+.+++
T Consensus 215 i~~~g~~~~~ 224 (256)
T TIGR03873 215 VVAAGPPREV 224 (256)
T ss_pred EEEecCHHHh
Confidence 9999998775
No 402
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.1e-35 Score=366.32 Aligned_cols=257 Identities=23% Similarity=0.363 Sum_probs=194.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.++.+...+|+.++++.+++. .. +....+.....++++||++.++.
T Consensus 297 ~~~~~~~~~ri~~~l~~~~~~-----~~--~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 342 (571)
T TIGR02203 297 MQRGLAAAESLFTLLDSPPEK-----DT--GTRAIERARGDVEFRNVTFRYPG--------------------------- 342 (571)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CC--CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 667788888888887665441 00 00011112346999999999842
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
...++|+|+|+.++||+.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 343 -----~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 414 (571)
T TIGR02203 343 -----RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQD 414 (571)
T ss_pred -----CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccC
Confidence 1124999999999999999999999999999999999999998 9999999999876653 4679999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+. +++.|++|||.++..- ....+.+.++.+.. + .++.+ -.|++..||
T Consensus 415 ~~-lf~~Ti~~Ni~~~~~~---~~~~~~i~~~l~~~---~------------------------l~~~i--~~lp~gldt 461 (571)
T TIGR02203 415 VV-LFNDTIANNIAYGRTE---QADRAEIERALAAA---Y------------------------AQDFV--DKLPLGLDT 461 (571)
T ss_pred cc-cccccHHHHHhcCCCC---CCCHHHHHHHHHHc---C------------------------hHHHH--HhCcCcccc
Confidence 64 5567999999876310 11112222221110 0 11111 236677899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.||+.+ +.||||||||++|||+++++|+|++||||||+||..++..|.+.|++.. .++|+|++ +|+ ....+.||+
T Consensus 462 ~i~~~g-~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~--~~~tiIii-tH~-~~~~~~~D~ 536 (571)
T TIGR02203 462 PIGENG-VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM--QGRTTLVI-AHR-LSTIEKADR 536 (571)
T ss_pred eecCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh--CCCEEEEE-ehh-hHHHHhCCE
Confidence 999875 4699999999999999999999999999999999999999999998753 35566654 444 366889999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+++..|+++++.+
T Consensus 537 ii~l~~g~i~~~g~~~~l~~ 556 (571)
T TIGR02203 537 IVVMDDGRIVERGTHNELLA 556 (571)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999998753
No 403
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=7.1e-35 Score=364.55 Aligned_cols=223 Identities=22% Similarity=0.367 Sum_probs=177.3
Q ss_pred ceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHH
Q 000913 117 VEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLL 196 (1226)
Q Consensus 117 ~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~ 196 (1226)
..++++|+++.++. + .++|+|+|+.++||+.++|+|+||||||||++
T Consensus 333 ~~I~~~~vsf~y~~------------------------------~---~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~ 379 (588)
T PRK13657 333 GAVEFDDVSFSYDN------------------------------S---RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLIN 379 (588)
T ss_pred CeEEEEEEEEEeCC------------------------------C---CceecceeEEECCCCEEEEECCCCCCHHHHHH
Confidence 36999999999842 1 23899999999999999999999999999999
Q ss_pred HHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhc
Q 000913 197 ALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1226)
Q Consensus 197 ~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1226)
+|+|+++|+ +|+|.+||.++++... ++.++||+|++.+| +.|++|||.++.. ....+.+.++.+..
T Consensus 380 lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~Ti~~Ni~~~~~----~~~d~~i~~al~~~--- 448 (588)
T PRK13657 380 LLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLF-NRSIEDNIRVGRP----DATDEEMRAAAERA--- 448 (588)
T ss_pred HHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCcccc-cccHHHHHhcCCC----CCCHHHHHHHHHHh---
Confidence 999999998 9999999999887654 46899999987655 5799999988631 11112222221110
Q ss_pred CCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCC
Q 000913 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1226)
Q Consensus 274 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsg 353 (1226)
-.+..+ -.|++..||.+|+.+ +.||||||||++|||+|+++|+|++||||||+
T Consensus 449 ------------------------~l~~~i--~~lp~gldt~i~~~g-~~LSgGq~QRialARall~~~~iliLDEpts~ 501 (588)
T PRK13657 449 ------------------------QAHDFI--ERKPDGYDTVVGERG-RQLSGGERQRLAIARALLKDPPILILDEATSA 501 (588)
T ss_pred ------------------------CHHHHH--HhCcccccchhcCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccC
Confidence 011112 236777899999864 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecChhHHHH
Q 000913 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 354 LDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 414 (1226)
||+.++..|.+.|++.. .++|+|++ +|.. +..+.+|+|++|++|+++..|+++++.+
T Consensus 502 LD~~t~~~i~~~l~~~~--~~~tvIii-tHr~-~~~~~~D~ii~l~~G~i~~~g~~~~l~~ 558 (588)
T PRK13657 502 LDVETEAKVKAALDELM--KGRTTFII-AHRL-STVRNADRILVFDNGRVVESGSFDELVA 558 (588)
T ss_pred CCHHHHHHHHHHHHHHh--cCCEEEEE-EecH-HHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 99999999999998753 34566664 4443 5678899999999999999999998864
No 404
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.6e-35 Score=314.35 Aligned_cols=199 Identities=23% Similarity=0.291 Sum_probs=165.9
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ .+.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 45678877763 2469999999999999999999999999999999999876 46899999998754
Q ss_pred h--hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000913 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1226)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqr 1013 (1226)
. ..+++.++|++|++.+++.+|+.|++.+....+. . ..++.++++++.++|.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 2345678999999988889999999988654321 1 1235678999999998777765 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000913 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1226)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll 1081 (1226)
||++||++|+++|++|+|||||+|||+.++..+++.|+++.++|.|||+++|+++. +.+.-+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~-i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLP-VASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhh-hccCCceEEec
Confidence 99999999999999999999999999999999999999987778999999999863 44433566554
No 405
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=322.95 Aligned_cols=229 Identities=17% Similarity=0.242 Sum_probs=177.5
Q ss_pred CCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHH
Q 000913 113 DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKT 192 (1226)
Q Consensus 113 ~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKS 192 (1226)
+.|...++++|+++.+. ..++|+|+|+.|++|++++|+||||||||
T Consensus 8 ~~~~~~l~~~~l~~~~~----------------------------------~~~il~~isl~i~~Ge~~~i~G~nGsGKS 53 (260)
T PRK10744 8 ATAPSKIQVRNLNFYYG----------------------------------KFHALKNINLDIAKNQVTAFIGPSGCGKS 53 (260)
T ss_pred cCCCceEEEEEEEEEeC----------------------------------CeEEeeceeEEEcCCCEEEEECCCCCCHH
Confidence 45667789999998762 12499999999999999999999999999
Q ss_pred HHHHHHhcCCC--CCCCceeEEEEcCccCCCC--C---ccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHH
Q 000913 193 TLLLALAGKLD--PTLKVSGTVTYNGHDMDEF--V---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTE 265 (1226)
Q Consensus 193 TLL~~L~G~~~--~~~~~~G~I~~nG~~~~~~--~---~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 265 (1226)
|||++|+|.++ |....+|+|.++|.++... . .++.++|++|+..+++ +||+||+.++...... ...
T Consensus 54 TLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~-~~~----- 126 (260)
T PRK10744 54 TLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFEK-LSR----- 126 (260)
T ss_pred HHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcCC-CCH-----
Confidence 99999999986 2101289999999887421 1 2467999999887777 8999999886532210 000
Q ss_pred HHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccc
Q 000913 266 LARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALAL 345 (1226)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vl 345 (1226)
.+....++.+++.+|+........ +.....|||||||||+||++|+.+|++|
T Consensus 127 ---------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p~ll 178 (260)
T PRK10744 127 ---------------------------AEMDERVEWALTKAALWNEVKDKL-HQSGYSLSGGQQQRLCIARGIAIRPEVL 178 (260)
T ss_pred ---------------------------HHHHHHHHHHHHHcCCChhhHHHH-hcCCCCCCHHHHHHHHHHHHHHCCCCEE
Confidence 001123456778888742111111 2334579999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecChhHHH
Q 000913 346 FMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 346 lLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
+|||||+|||..+...+.+.|+++. .+ ++||.++|+..++.+++|++++|++|+++..|+.+++.
T Consensus 179 lLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 179 LLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999874 34 45566778888899999999999999999999988764
No 406
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=322.73 Aligned_cols=219 Identities=19% Similarity=0.229 Sum_probs=177.7
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITIS 930 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~ 930 (1226)
..+..+.+++.+. ++.+|+|+||++++||++||+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 4567777776652 35799999999999999999999999999999999998652 1 258999999
Q ss_pred CccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000913 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1226)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1226)
|.++.. ..+++.++|++|++.++ .+|+.||+.+....+. . ..+.++.++++++.++|.+......+. .+
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Cc
Confidence 987532 23456799999998877 5999999998754332 1 123345688899999986433222221 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe---
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK--- 1082 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~--- 1082 (1226)
..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 6799999999999999999999999999999999999999999999985 4799999999987 4788999999996
Q ss_pred ----cCcEEEEeCCC
Q 000913 1083 ----RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ----~Gg~~~y~G~~ 1093 (1226)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 45899999974
No 407
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=323.04 Aligned_cols=208 Identities=22% Similarity=0.307 Sum_probs=165.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC-----CCCceeEEEEcCccCCCC-----CccceEEEecCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP-----TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~-----~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d 235 (1226)
.+|+|+|+.|+||++++|+|||||||||||++|+|.++| + +|+|+++|.++... ..++.++|++|++
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 109 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRV---TGKITLDGEDIYDPRLDVVELRARVGMVFQKP 109 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---ceEEEECCEECcccccchHHHhhceEEEecCC
Confidence 499999999999999999999999999999999999874 5 89999999887531 1245799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
.+++ .||+||+.|+....+..... .+....++.+++.+||.+.....
T Consensus 110 ~~~~-~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 156 (267)
T PRK14235 110 NPFP-KSIYENVAYGPRIHGLARSK--------------------------------AELDEIVETSLRKAGLWEEVKDR 156 (267)
T ss_pred CCCC-CcHHHHHHHHHHhcccccch--------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7777 49999999875432210000 00112356678888886421111
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
. +..++.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ +. +|+.++|+..++..++|++
T Consensus 157 ~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~-tiiivtH~~~~~~~~~d~v 232 (267)
T PRK14235 157 L-HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NY-TIVIVTHSMQQAARVSQRT 232 (267)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CC-eEEEEEcCHHHHHhhCCEE
Confidence 1 233567999999999999999999999999999999999999999999998743 44 5555778888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000913 396 ILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1226)
++|++|+++.+|+.+++.
T Consensus 233 ~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 233 AFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 408
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.8e-34 Score=314.51 Aligned_cols=199 Identities=21% Similarity=0.347 Sum_probs=164.8
Q ss_pred EeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-ccceEEEecCCCCCCCCCCHHH
Q 000913 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-PQRTAAYISQHDNHIGEMTVRE 245 (1226)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1226)
+++|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 357999999999999999999999999999999999998 999999999875432 2467999999998999999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000913 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1226)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1226)
|+.+..... .... .+....++.+++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~-~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPG-LKLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhcc-CCcc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 998753211 0000 000123466788999987666544 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEE
Q 000913 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1226)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1226)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.. ..+++|+.++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCS-ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999999999999999999999999999999998764 334555557888888999999999999999999
Q ss_pred ecC
Q 000913 406 QGP 408 (1226)
Q Consensus 406 ~G~ 408 (1226)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 409
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.7e-35 Score=316.68 Aligned_cols=194 Identities=23% Similarity=0.380 Sum_probs=160.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-----CccceEEEecCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGE 240 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~~~ 240 (1226)
.+|+|+|+.++||++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.
T Consensus 14 ~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 14 HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 4999999999999999999999999999999999999988 99999999887421 123679999999888989
Q ss_pred CCHHHHHHHHhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
+||+||+.++.. .++... .+....++.+++.+||++..++.+
T Consensus 91 ~t~~e~l~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 133 (213)
T cd03262 91 LTVLENITLAPIKVKGMSK----------------------------------AEAEERALELLEKVGLADKADAYP--- 133 (213)
T ss_pred CcHHHHHHhHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhhCc---
Confidence 999999988642 111000 001123466788899987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..|||||||||+||++++.+|+++||||||+|||+.+...+.+.|+++.. .+. +||.++|+..++.+++|+|++|+
T Consensus 134 --~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~-tvi~~sh~~~~~~~~~d~i~~l~ 209 (213)
T cd03262 134 --AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGM-TMVVVTHEMGFAREVADRVIFMD 209 (213)
T ss_pred --cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHhCCEEEEEe
Confidence 56999999999999999999999999999999999999999999998764 344 45557888899999999999999
Q ss_pred CCeE
Q 000913 400 DGQI 403 (1226)
Q Consensus 400 ~G~i 403 (1226)
+|++
T Consensus 210 ~g~i 213 (213)
T cd03262 210 DGRI 213 (213)
T ss_pred CCcC
Confidence 9974
No 410
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.6e-34 Score=317.03 Aligned_cols=193 Identities=26% Similarity=0.347 Sum_probs=160.9
Q ss_pred cCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhhhcceeeEeecCCCCCCCCC
Q 000913 878 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVT 957 (1226)
Q Consensus 878 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 957 (1226)
++++.+|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+|
T Consensus 32 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~t 100 (224)
T cd03220 32 VGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELT 100 (224)
T ss_pred cCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCc
Confidence 345679999999999999999999999999999999999876 568999999976421 111233456789
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000913 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1226)
Q Consensus 958 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsg 1037 (1226)
|+||+.+....+. ....+.++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 101 v~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~g 172 (224)
T cd03220 101 GRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAV 172 (224)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999988654321 233444556888999999988777664 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1038 LD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 173 LD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 173 GDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 9999999999999998777899999999986 47778999999986 6877654
No 411
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=8.2e-35 Score=314.05 Aligned_cols=195 Identities=27% Similarity=0.333 Sum_probs=166.4
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4677776653 2468999999999999999999999999999999999876 468999999987532
Q ss_pred --hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
..+++.++|++|++.+++.+|++||+.+.... . .+++++++++.+++.+..++. +..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHH
Confidence 23556799999998888889999999875311 1 234578899999998877665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll 1081 (1226)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998777999999999986 577888999876
No 412
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-34 Score=316.54 Aligned_cols=224 Identities=23% Similarity=0.327 Sum_probs=181.9
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC-C--ceEEEEEEEcCc
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G--GYITGNITISGY 932 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~--~~~~G~i~i~g~ 932 (1226)
++.+|++.++.... +...+++||||++++||++||+|.||||||||.++|.|... + ...+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 46778876665431 24579999999999999999999999999999999999765 2 346689999998
Q ss_pred cC---Chhh----hcceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCC
Q 000913 933 PK---KQET----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLP 1003 (1226)
Q Consensus 933 ~~---~~~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 1003 (1226)
++ +.+. +.+.++|++|++. +.|.+||.+-+.=......... ..++..+++.++|+.++|.+-....-..
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y- 150 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSY- 150 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhC-
Confidence 64 2221 2356999999975 6788999887765444332111 3456677889999999998643222222
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+.+|||||||||.||.||+.+|++||.||||++||...++.|+++|+++.+ .|.|+|++|||+.. +.+.||||+||.
T Consensus 151 -PhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMY 228 (316)
T COG0444 151 -PHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMY 228 (316)
T ss_pred -CcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEE
Confidence 468999999999999999999999999999999999999999999999986 69999999999985 899999999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
. |++|..|+.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 899999985
No 413
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.8e-33 Score=355.03 Aligned_cols=122 Identities=24% Similarity=0.302 Sum_probs=102.0
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhhCC---CEEEE
Q 000913 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIFM 1031 (1226)
Q Consensus 956 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p---~il~L 1031 (1226)
+||.|++.|...+.. .....+.++.++|... .+.. ...||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~~---------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIPK---------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhchh---------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 789999888654321 1124578999999753 4444 3579999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe-----cCcEEEEeCCC
Q 000913 1032 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1093 (1226)
Q Consensus 1032 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~-----~Gg~~~y~G~~ 1093 (1226)
||||+|||+.....+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999985 346899999995 57899999974
No 414
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=4.4e-33 Score=365.33 Aligned_cols=134 Identities=22% Similarity=0.267 Sum_probs=108.6
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000913 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1027 (1226)
Q Consensus 952 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~LSgGqrqrl~ia~~L~---~~p~ 1027 (1226)
.+...||.|+|.++..-......+.++..+.+ ++++.++|..+ .+.. ...||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44567999999887643221112233444556 58889999875 4555 3579999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe-----cCcEEEEeCCC
Q 000913 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1093 (1226)
Q Consensus 1028 il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~-----~Gg~~~y~G~~ 1093 (1226)
+++|||||+|||+.+...+++.|+++.++|.|||+++|++.. + +.+|++++|. .||+++..|+.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~-i-~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHV-V-KVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 999999999999999999999999998889999999999863 4 8999999996 36899999975
No 415
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-36 Score=301.58 Aligned_cols=206 Identities=25% Similarity=0.391 Sum_probs=181.2
Q ss_pred CceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhhcceeeEeecCCCCCCC
Q 000913 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPF 955 (1226)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 955 (1226)
+.+.+|+++|..|++|.+++|+|||||||||||.+++++.. ..+|+|.++|.++.. ..+++.++..-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 45789999999999999999999999999999999998766 568999999988643 4567778888998888888
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000913 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1226)
Q Consensus 956 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPT 1035 (1226)
+||+|-+.|+.......... ++.+..++++++.++|+++.|+.. .+||||||||..||+.|+.+.+.++||||.
T Consensus 90 lTV~dLv~FGRfPYSqGRlt-~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEPL 163 (252)
T COG4604 90 LTVRDLVGFGRFPYSQGRLT-KEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEPL 163 (252)
T ss_pred eEHHHHhhcCCCcccCCCCc-hHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCcc
Confidence 99999999985544333333 455677999999999999999985 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 000913 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1226)
Q Consensus 1036 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~ 1094 (1226)
++||...+..+|+.||+++++ |+|||++.||.++ .-.+.|+++.|++ |+++..|++.
T Consensus 164 NNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~ 221 (252)
T COG4604 164 NNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPD 221 (252)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHH
Confidence 999999999999999999866 9999999999985 5567899999996 7999999974
No 416
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8.5e-35 Score=317.09 Aligned_cols=200 Identities=28% Similarity=0.443 Sum_probs=160.1
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCC--CCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHI--GEMT 242 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1226)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 35999999999999999999999999999999999999998 9999999987642 346799999987653 3489
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+||+.++...... ..... ..+....++.+++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~~--~~~~~----------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 131 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRRL----------------------------SKADKAKVDEALERVGLSELADRQI-----G 131 (213)
T ss_pred HHHHHHhccccccc--cccCC----------------------------CHHHHHHHHHHHHHcCCHHHHhCCc-----c
Confidence 99999886421100 00000 0001123567888999987666554 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++||.++|+..++.+++|+|++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999998765 3 445666788888999999999999886
Q ss_pred EEEec
Q 000913 403 IVYQG 407 (1226)
Q Consensus 403 iv~~G 407 (1226)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 417
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-34 Score=324.37 Aligned_cols=205 Identities=22% Similarity=0.287 Sum_probs=168.4
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCCCC-CCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGE 240 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1226)
..+|+|+|+.+++|++++|+|+||||||||+++|+|.++|+ +|+|+++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 34999999999999999999999999999999999999998 999999999875432 2467999999863 6778
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000913 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1226)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1226)
.||.||+.++....+.. + .+....++.+++.+||.+..++.
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 137 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTRE----- 137 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCC-----
Confidence 99999998865322110 0 00112356778889998766654
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
+..|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++....+.| |+.++|+..++. .+|+|++|++
T Consensus 138 ~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~t-iil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 138 PARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLT-VLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHH-hCCEEEEEEC
Confidence 45699999999999999999999999999999999999999999999876532444 555777777775 6999999999
Q ss_pred CeEEEecChhHHH
Q 000913 401 GQIVYQGPRELVL 413 (1226)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1226)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 418
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=325.22 Aligned_cols=215 Identities=20% Similarity=0.253 Sum_probs=174.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1226)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+|||||||||++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 488999998874 2469999999999999999999999999999999999642 1 13579999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++.. ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87632 2345679999999888774 99999987643221 1122233455778888888852 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 4778999999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 6 789999874
No 419
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=326.99 Aligned_cols=215 Identities=20% Similarity=0.270 Sum_probs=175.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1226)
.+.++++++.++ .+.+|+|+|++|++||+++|+|+|||||||||++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578999988874 2359999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC----cccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++. ||+||+.|....+.. .+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1345679999999888774 999999986533211 12233345677888888874 233332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |++++.|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 6 789998874
No 420
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=324.37 Aligned_cols=219 Identities=23% Similarity=0.280 Sum_probs=178.6
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1226)
.+.++|+++.++ .+.+|+||||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 478999998874 24699999999999999999999999999999999998652 13689999999
Q ss_pred ccCCh----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000913 932 YPKKQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1226)
Q Consensus 932 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1226)
.++.. ..+++.++|++|++.+++ .|++||+.+...... ..+.++....+.++++.+++.+..+..... .+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~-~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLSD-SPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhhC-Cccc
Confidence 87532 234667999999988887 899999987643221 123344445677889999986532211111 2467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 000913 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1226)
Q Consensus 1008 LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~ 1087 (1226)
||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57889999999986 799
Q ss_pred EEeCCC
Q 000913 1088 IYVGPL 1093 (1226)
Q Consensus 1088 ~y~G~~ 1093 (1226)
++.|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999874
No 421
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.5e-34 Score=318.88 Aligned_cols=207 Identities=24% Similarity=0.302 Sum_probs=167.1
Q ss_pred EeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCceeEEEEcCccCCCCCcc-ceEEEecCCCC--CCC
Q 000913 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDN--HIG 239 (1226)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~I~~nG~~~~~~~~~-~~~~yv~Q~d~--~~~ 239 (1226)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++.....+ +.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999988 6 99999999987654332 57999999874 556
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.+|+.|++.+.....+... .+....++.+++.+||++. +...+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~--~~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDP--EEVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCch--HHHHhC
Confidence 7899999987643221100 0011235678899999732 011123
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
.+..|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++.+ ..+++|+.++|+..++..++|+|++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQ-LFGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4456999999999999999999999999999999999999999999998765 334455557788889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|+++..|+++++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999988764
No 422
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=321.46 Aligned_cols=219 Identities=24% Similarity=0.252 Sum_probs=175.8
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478899988763 246999999999999999999999999999999999974321 2479999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.++.. ...++.++|++|++.+++. ||+||+.|....+.. ....+.++.+.++++.+++.+........ .+.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHD-SAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhc-Chh
Confidence 87642 2345679999999988874 999999987544321 12233445678889988875321111111 145
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 689999999986 47788999999986 78
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 9988874
No 423
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.8e-34 Score=323.54 Aligned_cols=207 Identities=22% Similarity=0.258 Sum_probs=169.0
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC--CCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN--HIG 239 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1226)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 45999999999999999999999999999999999999998 9999999988753221 246999999864 577
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-ccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGD 318 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1226)
.+||.+++.+..+....... .+....++.+++.+||. ...++.
T Consensus 103 ~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 146 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLEP---------------------------------EQREKQIIETLRQVGLLPDHASYY--- 146 (267)
T ss_pred chhHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCChHHHhcC---
Confidence 88999999886543210000 00112356788999994 455544
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
+..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++.+.. +++||.++|+..++..++|++++|
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 147 --PHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred --chhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 34699999999999999999999999999999999999999999999976533 445555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 424
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.3e-34 Score=319.18 Aligned_cols=202 Identities=27% Similarity=0.326 Sum_probs=165.7
Q ss_pred eeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHH
Q 000913 168 LKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETL 247 (1226)
Q Consensus 168 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1226)
|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999988 9999999998765432 248999999899999999999
Q ss_pred HHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChh
Q 000913 248 AFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGG 327 (1226)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1226)
.++......... ..+....++.+++.+||++..++.+ ..||||
T Consensus 76 ~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDLS--------------------------------KSERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccCCC--------------------------------HHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 886321000000 0001123566788999987766654 469999
Q ss_pred HhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEec
Q 000913 328 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1226)
Q Consensus 328 qrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1226)
|||||+||++|+.+|+++||||||+|||+.++..+.+.|+++++..+ .+|+.++|+..++.+++|+|++|++|++++.|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHR-VTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 99999999999999999999999999999999999999998765334 45555788888999999999999999999988
Q ss_pred ChhHH
Q 000913 408 PRELV 412 (1226)
Q Consensus 408 ~~~~~ 412 (1226)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 425
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.7e-34 Score=337.19 Aligned_cols=199 Identities=24% Similarity=0.403 Sum_probs=169.1
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-------CccceEEEecCCCCCCCCCC
Q 000913 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1226)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999998 99999999887432 12467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
|+||+.|+.+... . . +....++.+++.+||++..+..+ .
T Consensus 92 v~enl~~~~~~~~--~-----~-----------------------------~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P-----S-----------------------------ERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h-----h-----------------------------HHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998753210 0 0 01123567889999987776554 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCe
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1226)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+..+ ++||.++|+..++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFG-IPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 6999999999999999999999999999999999999999999999865334 455567888899999999999999999
Q ss_pred EEEecChhHHH
Q 000913 403 IVYQGPRELVL 413 (1226)
Q Consensus 403 iv~~G~~~~~~ 413 (1226)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988764
No 426
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=321.67 Aligned_cols=230 Identities=20% Similarity=0.273 Sum_probs=179.9
Q ss_pred CCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcH
Q 000913 112 IDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGK 191 (1226)
Q Consensus 112 ~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 191 (1226)
.+.+...++++||++.+. .+++|+|||+++++|++++|+|||||||
T Consensus 14 ~~~~~~~l~~~nl~~~~~----------------------------------~~~il~~vsl~i~~Ge~~~I~G~nGsGK 59 (267)
T PRK14237 14 FPEEEIALSTKDLHVYYG----------------------------------KKEAIKGIDMQFEKNKITALIGPSGSGK 59 (267)
T ss_pred cCCCCeEEEEeeEEEEEC----------------------------------CeeeEeeeEEEEcCCCEEEEECCCCCCH
Confidence 344556799999998762 1249999999999999999999999999
Q ss_pred HHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhH
Q 000913 192 TTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLT 264 (1226)
Q Consensus 192 STLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~ 264 (1226)
||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+++ .||+||+.++....+....
T Consensus 60 STLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~----- 133 (267)
T PRK14237 60 STYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDK----- 133 (267)
T ss_pred HHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCH-----
Confidence 99999999998631 01289999999987532 12457999999887776 6999999987532211000
Q ss_pred HHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCcc
Q 000913 265 ELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALA 344 (1226)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~v 344 (1226)
++....+..+++.++|.++.+... +..++.||||||||++||++|+.+|++
T Consensus 134 ----------------------------~~~~~~~~~~l~~~~l~~~i~~~~-~~~~~~LS~G~~qrl~laral~~~p~l 184 (267)
T PRK14237 134 ----------------------------KVLDEIVETSLKQAALWDQVKDDL-HKSALTLSGGQQQRLCIARAIAVKPDI 184 (267)
T ss_pred ----------------------------HHHHHHHHHHHHHcCCCchhhhhh-cCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 001123456778888864332222 345668999999999999999999999
Q ss_pred ceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcCCeEEEecChhHHH
Q 000913 345 LFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 345 llLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+++|++++|++|++++.|+.+++.
T Consensus 185 llLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 185 LLMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999874 34 45566778888999999999999999999999988763
No 427
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=321.47 Aligned_cols=211 Identities=22% Similarity=0.339 Sum_probs=166.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCC--C---CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDE--F---VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~nG~~~~~--~---~~~~~~~yv~Q~d~~~ 238 (1226)
++|+|+|+.|++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 49999999999999999999999999999999999987410 128999999988642 1 1235799999998899
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+.+||+||+.++....+.... .+....++.+++.+||........ +
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL-D 143 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 999999999887543211000 001123456777888742111111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +. +||.++|+..++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~-tviivsH~~~~~~~~~d~i~~l 220 (258)
T PRK14241 144 KPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DY-TIVIVTHNMQQAARVSDQTAFF 220 (258)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CC-EEEEEecCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998742 34 5555788888999999999999
Q ss_pred c------CCeEEEecChhHHH
Q 000913 399 S------DGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~------~G~iv~~G~~~~~~ 413 (1226)
+ +|++++.|+++++.
T Consensus 221 ~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 221 NLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred ecccCCCCceEEecCCHHHHH
Confidence 6 79999999988764
No 428
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=326.41 Aligned_cols=218 Identities=22% Similarity=0.391 Sum_probs=175.5
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ +++.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 588899988773 12469999999999999999999999999999999999876 5689999999876
Q ss_pred ChhhhcceeeEeecCCCCC--CCCCHHHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 935 KQETFARISGYCEQNDIHS--PFVTIYESLLFSAWLRL-SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~--~~lTv~E~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
.....++.++|++|++.+. ...+++|++.+...... .........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4332234699999997653 23478888865421100 001111233456788999999988777764 469999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G 1091 (1226)
||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 477899999777 4 7999998
Q ss_pred CCC
Q 000913 1092 PLG 1094 (1226)
Q Consensus 1092 ~~~ 1094 (1226)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 753
No 429
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=320.83 Aligned_cols=215 Identities=24% Similarity=0.319 Sum_probs=174.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1226)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|...+ . +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478899988873 24699999999999999999999999999999999998641 1 2589999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 234567999999988776 799999987643221 1122333456788899998842 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 467999999999999999999999999999999999999999999999854 799999999987 4788899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 6 688888874
No 430
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.6e-34 Score=314.49 Aligned_cols=201 Identities=19% Similarity=0.294 Sum_probs=153.7
Q ss_pred CceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc
Q 000913 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1226)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1226)
|..+-.+||+|.++ +.++++++++|-|.--..+||+||||.||||||++|.|... +..|+.+-|.
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKnh- 648 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKNH- 648 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhccc-
Confidence 44577889988875 45689999999999999999999999999999999999877 4456654331
Q ss_pred cCChhhhcceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 933 PKKQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 933 ~~~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
+-.+|+..|+.. +-..-|.-|.|.-. .+ .+.+ .....|-.+||...++++- +..|||
T Consensus 649 -------rL~iG~FdQh~~E~L~~Eetp~EyLqr~----FN--lpyq----~ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 649 -------RLRIGWFDQHANEALNGEETPVEYLQRK----FN--LPYQ----EARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred -------eeeeechhhhhHHhhccccCHHHHHHHh----cC--CChH----HHHHHhhhhhhhhccceEe----eeecCC
Confidence 234788888643 34455766766421 11 2222 2345778888988887753 568999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
|||-||++|-.-+..|+||||||||++||.++...+-++|+.+ ...||+++||-.. |.+--+.+.++.+.|.---.
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eId 783 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEID 783 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhcc
Confidence 9999999999999999999999999999999999999999876 4579999999764 55666778888776654445
Q ss_pred CCC
Q 000913 1091 GPL 1093 (1226)
Q Consensus 1091 G~~ 1093 (1226)
|..
T Consensus 784 GdF 786 (807)
T KOG0066|consen 784 GDF 786 (807)
T ss_pred ccH
Confidence 543
No 431
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-35 Score=315.33 Aligned_cols=201 Identities=25% Similarity=0.306 Sum_probs=182.0
Q ss_pred eEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---h---h-hcceeeEeecCCCCC
Q 000913 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---E---T-FARISGYCEQNDIHS 953 (1226)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~-~~~~~gyv~Q~~~~~ 953 (1226)
..-++|+|++++.||++.|||-||||||||+++|.++.. +..|+|.++|.++.. . . .++.++.|+|...++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 457999999999999999999999999999999999887 678999999987532 1 2 345699999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000913 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1226)
Q Consensus 954 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDE 1033 (1226)
|+.||.||..|+..++ .++++++++++.++|+.+||.++.++++ .+||||+||||.|||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999997776 3678899999999999999999999984 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1034 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1034 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|+|.|||--+..+++-|.++.+ -.+|||++|||.+ |.++.-|||.+|+ +|+++..|.+
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp 249 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTP 249 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCH
Confidence 9999999999999999888854 4899999999998 7899999999998 5899999986
No 432
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.3e-33 Score=315.41 Aligned_cols=173 Identities=24% Similarity=0.296 Sum_probs=137.3
Q ss_pred eecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhhhcceeeEeecCCCCCCCCCHHHHHH
Q 000913 884 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 963 (1226)
Q Consensus 884 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 963 (1226)
|.==.+.|..||+++++||||-||||+.++|+|..+ +.+|. .. .-.++|=||--.-....||++.|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 444467899999999999999999999999999876 44565 11 113678888755556789999776
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000913 964 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1226)
Q Consensus 964 f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~ 1043 (1226)
-...-+... .-...++++-|.|.++.+..+ .+|||||.|||+||.+|..+.+|.+||||++.||.+.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 433221111 123457888999999998875 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1044 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1044 ~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
..+-+.||+... +++|.+++-||..+ +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999999875 47899999999864 445678888875
No 433
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=318.83 Aligned_cols=210 Identities=20% Similarity=0.313 Sum_probs=165.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCCC-----ccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|++|++|++++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14270 18 QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPF 97 (251)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcC
Confidence 4899999999999999999999999999999999998751 013899999999875321 245799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+ +||+||+.|.....+.... .+....++.+++.+||....... -+
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~ 142 (251)
T PRK14270 98 P-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDD-LK 142 (251)
T ss_pred C-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhH-hh
Confidence 7 8999999987543221000 00112345567788774211111 12
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..++.|||||||||+||++++.+|++++|||||+|||+.++.++.+.|+++.. +. +|+.++|+..++.+++|+|++|
T Consensus 143 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~-tiiivsH~~~~~~~~~d~v~~l 219 (251)
T PRK14270 143 KSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EY-TIVIVTHNMQQASRVSDYTAFF 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CC-eEEEEEcCHHHHHHhcCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 34 4555777888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 220 LMGDLIEFNKTEKIF 234 (251)
T ss_pred ECCeEEEeCCHHHHh
Confidence 999999999998764
No 434
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=319.52 Aligned_cols=215 Identities=24% Similarity=0.299 Sum_probs=173.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1226)
.+.++|+++.++ .+.+|+|+|+++++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478899988764 2469999999999999999999999999999999999743 1 12479999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87531 234567999999988887 6999999886443321 122223345677888887642 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 589999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 788888874
No 435
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.4e-34 Score=354.84 Aligned_cols=211 Identities=21% Similarity=0.312 Sum_probs=181.4
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+||++++|+++||+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488899998874 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Ch---hh-hcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ---ET-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. .. .++.+||++|++.+++.+||+|++.|... . ..+.++.+.++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 42 11 23458999999999999999999988531 1 1233456889999999988777764 56999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999986 47789999999986 689999
Q ss_pred CCCC
Q 000913 1091 GPLG 1094 (1226)
Q Consensus 1091 G~~~ 1094 (1226)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 9864
No 436
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.9e-34 Score=353.84 Aligned_cols=220 Identities=22% Similarity=0.340 Sum_probs=181.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ ++.+|+||||++++|+++||+||||||||||+++|+|...+++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788887763 24699999999999999999999999999999999998753235899999998764
Q ss_pred hh----hhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCC
Q 000913 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLR-QSLVGLPGVSGLS 1009 (1226)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~~g~~~~~~LS 1009 (1226)
.. ..++.+|||+|++.+++.+||+|++.+........ ....++.+++++++++.+++.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 31 12356999999998889999999998864332111 122334456788999999997654 343 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||||+||++|+.+|+||||||||+|||+.+...+++.|++++++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999987 47788999999986 68999
Q ss_pred eCCCCc
Q 000913 1090 VGPLGR 1095 (1226)
Q Consensus 1090 ~G~~~~ 1095 (1226)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 887653
No 437
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.4e-34 Score=322.91 Aligned_cols=224 Identities=25% Similarity=0.330 Sum_probs=179.6
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++... ..+. ..++.+|+|+||++++|++++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888888774210 0000 013569999999999999999999999999999999999866 56899999998653
Q ss_pred h------hhhcceeeEeecCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000913 936 Q------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1226)
Q Consensus 936 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1226)
. ...++.++|++|++ .+.+..|+.|++.+..... ......+....++++++.+++. ...+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 2 12456799999997 3567789999987643211 1123344456789999999996 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
.||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999986 47778999999985 7
Q ss_pred EEEEeCCCC
Q 000913 1086 QEIYVGPLG 1094 (1226)
Q Consensus 1086 ~~~y~G~~~ 1094 (1226)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 899998753
No 438
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-34 Score=318.94 Aligned_cols=209 Identities=19% Similarity=0.275 Sum_probs=165.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcC---CCCCCCceeEEEEcCccCCCCC-----ccceEEEecCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGK---LDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNH 237 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~---~~~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1226)
++|+|+|+.+++|++++|+|||||||||||++|+|. +++. ..+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 17 HALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred eEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 499999999999999999999999999999999997 3331 12899999999875421 23579999999877
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
++ .||+||+.++.+..+.... + .....++++++.+||.+...+..
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 140 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKDN-A--------------------------------FIRQRVEETLKGAALWDEVKDKL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 6999999887543221000 0 01123466788888864322222
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEE
Q 000913 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1226)
+..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++||.++|+..++.+++|+|++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~v~~ 217 (250)
T PRK14245 141 KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVSDKTAF 217 (250)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhCCEEEE
Confidence 23455799999999999999999999999999999999999999999999873 34 4555577888899999999999
Q ss_pred EcCCeEEEecChhHHH
Q 000913 398 LSDGQIVYQGPRELVL 413 (1226)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1226)
|++|++++.|+++++.
T Consensus 218 l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 218 FYMGEMVEYDDTKKIF 233 (250)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999998874
No 439
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.7e-35 Score=392.60 Aligned_cols=257 Identities=19% Similarity=0.227 Sum_probs=198.0
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhh-hcCCC-CC-cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhH
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRID-RVGID-LP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1226)
.+.....+||+.++++.++|. ....+ ....+ -| ..+|+|+||++.|..
T Consensus 1199 ~e~~~~sveRi~e~~~~~~E~-----~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~------------------------ 1249 (1622)
T PLN03130 1199 AENSLNAVERVGTYIDLPSEA-----PLVIENNRPPPGWPSSGSIKFEDVVLRYRP------------------------ 1249 (1622)
T ss_pred HHHHHHHHHHHHHHhCCCCcc-----cccccCCCCCCCCCCCCcEEEEEEEEEeCC------------------------
Confidence 367788899999988766551 00000 00011 12 357999999999842
Q ss_pred hhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEe
Q 000913 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1226)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv 231 (1226)
...++|+|||++|+|||.+||+|++|||||||+++|.|+++|+ +|+|++||.++.+... |+.++||
T Consensus 1250 --------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~---~G~I~IDG~dI~~i~l~~LR~~IsiV 1318 (1622)
T PLN03130 1250 --------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELE---RGRILIDGCDISKFGLMDLRKVLGII 1318 (1622)
T ss_pred --------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCEecccCCHHHHHhccEEE
Confidence 1124999999999999999999999999999999999999998 9999999999987754 4789999
Q ss_pred cCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc
Q 000913 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1226)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1226)
||++.+|. .||||||.++.. ...+.+.+++++... +.. +..|+..
T Consensus 1319 pQdp~LF~-GTIreNLd~~~~-----~tdeei~~Al~~a~l---------------------------~~~--I~~lp~G 1363 (1622)
T PLN03130 1319 PQAPVLFS-GTVRFNLDPFNE-----HNDADLWESLERAHL---------------------------KDV--IRRNSLG 1363 (1622)
T ss_pred CCCCcccc-ccHHHHhCcCCC-----CCHHHHHHHHHHcCc---------------------------HHH--HHhCccc
Confidence 99887665 699999986431 122333333322110 111 2246778
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhh
Q 000913 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1226)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1226)
.||.||+.+. .||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++|+ |++.|.. ++...
T Consensus 1364 Ldt~Vge~G~-nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~--~~~Tv-I~IAHRL-~tI~~ 1438 (1622)
T PLN03130 1364 LDAEVSEAGE-NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTM-LIIAHRL-NTIID 1438 (1622)
T ss_pred cCccccCCCC-CCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC--CCCEE-EEEeCCh-HHHHh
Confidence 8999998665 599999999999999999999999999999999999999999999753 34454 4455544 55667
Q ss_pred cCcEEEEcCCeEEEecChhHHHH
Q 000913 392 FDDIILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1226)
+|+|++|++|+|+++|+++++++
T Consensus 1439 ~DrIlVLd~G~IvE~Gt~~eLl~ 1461 (1622)
T PLN03130 1439 CDRILVLDAGRVVEFDTPENLLS 1461 (1622)
T ss_pred CCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999874
No 440
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=353.51 Aligned_cols=216 Identities=27% Similarity=0.337 Sum_probs=181.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+||||++++|++++|+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 377889988773 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Ch----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000913 935 KQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSg 1010 (1226)
.. ..+++.+||++|++.+++.+||+||+.+..........+..+.+++++++++.++|.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 32 224567999999998889999999999853211111123344456788999999998766665 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~ 1090 (1226)
||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.||++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999987 47788999999986 688776
Q ss_pred CC
Q 000913 1091 GP 1092 (1226)
Q Consensus 1091 G~ 1092 (1226)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 65
No 441
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.4e-34 Score=360.38 Aligned_cols=257 Identities=22% Similarity=0.346 Sum_probs=190.5
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1226)
.+++...++|+.++.+.+++ ..+..+....+.+..+++|+||++.++.
T Consensus 299 ~~~~~~~~~ri~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~v~~~y~~--------------------------- 346 (585)
T TIGR01192 299 IFEARAKLEDFFDLEDSVFQ-----REEPADAPELPNVKGAVEFRHITFEFAN--------------------------- 346 (585)
T ss_pred HHHHHHHHHHHHHHHcCCcc-----ccCCccCCCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 45666777777777665433 1100010111122346999999998731
Q ss_pred cCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000913 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1226)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~ 234 (1226)
+ .++|+|+|+.+++|+.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|+
T Consensus 347 ---~---~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 417 (585)
T TIGR01192 347 ---S---SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQD 417 (585)
T ss_pred ---C---CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccC
Confidence 1 23899999999999999999999999999999999999998 9999999998876543 4689999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000913 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1226)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1226)
+.++ +.|++|||.++.. ....+...++++.. + .+.. ...++...||
T Consensus 418 ~~lf-~~ti~~Ni~~~~~----~~~~~~~~~a~~~~---~------------------------~~~~--i~~l~~g~~t 463 (585)
T TIGR01192 418 AGLF-NRSIRENIRLGRE----GATDEEVYEAAKAA---A------------------------AHDF--ILKRSNGYDT 463 (585)
T ss_pred CccC-cccHHHHHhcCCC----CCCHHHHHHHHHHh---C------------------------cHHH--HHhccccccc
Confidence 7665 5799999988631 11111122211110 0 0111 2235667789
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.+|+.+ ..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++.. .++|+|+ ++|.... ...+|+
T Consensus 464 ~~~~~~-~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~--~~~tvI~-isH~~~~-~~~~d~ 538 (585)
T TIGR01192 464 LVGERG-NRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR--KNRTTFI-IAHRLST-VRNADL 538 (585)
T ss_pred hhcCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh--CCCEEEE-EEcChHH-HHcCCE
Confidence 998764 4699999999999999999999999999999999999999999998753 3556555 5555444 467999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000913 395 IILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1226)
|++|++|+++..|+++++.+
T Consensus 539 i~~l~~G~i~~~g~~~~l~~ 558 (585)
T TIGR01192 539 VLFLDQGRLIEKGSFQELIQ 558 (585)
T ss_pred EEEEECCEEEEECCHHHHHH
Confidence 99999999999999998864
No 442
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=318.62 Aligned_cols=211 Identities=21% Similarity=0.307 Sum_probs=166.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++ |+...+|+|.++|.++... ..++.++|++|+..++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14256 18 HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPF 97 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCC
Confidence 49999999999999999999999999999999999986 3111289999999887432 1246799999998899
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+.+||+||+.++.+..+.... + +....++.+++.+|+........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14256 98 PAMSIYDNVIAGYKLNGRVNR-S--------------------------------EADEIVESSLKRVALWDEVKDRL-K 143 (252)
T ss_pred CcCcHHHHHHhHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 999999999876532210000 0 01123456777888754211111 1
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..+..|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++.. + ++||.++|+..++.+++|++++|
T Consensus 144 ~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l 220 (252)
T PRK14256 144 SNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAFF 220 (252)
T ss_pred CCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999999753 3 45566778888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 221 YMGDLVECGETKKIF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 443
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.3e-34 Score=319.99 Aligned_cols=206 Identities=25% Similarity=0.383 Sum_probs=167.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCcc-----CCCCCc-------cceEEEecC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~-----~~~~~~-------~~~~~yv~Q 233 (1226)
.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 4999999999999999999999999999999999999998 9999999987 654322 246999999
Q ss_pred CC--CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-
Q 000913 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1226)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1226)
++ .+++.+|+.||+.+.....+.. .. .+....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~--------------------------------~~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGAR-HY--------------------------------GDIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccC-cH--------------------------------HHHHHHHHHHHHHcCCChh
Confidence 86 3677889999997643211100 00 001123566788999963
Q ss_pred cccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHh
Q 000913 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1226)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 390 (1226)
..++. +..|||||||||+|||+|+.+|++|||||||+|||+.+...+.+.|+++.. ..+.+||.++|+..++.+
T Consensus 144 ~~~~~-----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDL-----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVR-ELGLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCC-----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHH
Confidence 44443 456999999999999999999999999999999999999999999998765 334556667888899999
Q ss_pred hcCcEEEEcCCeEEEecChhHHH
Q 000913 391 LFDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
.+|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999988763
No 444
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=318.22 Aligned_cols=208 Identities=19% Similarity=0.277 Sum_probs=166.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCceeEEEEcCccCCCCC---ccceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~I~~nG~~~~~~~---~~~~~~yv~Q~d~~~~ 239 (1226)
.+|+|+|+++++|++++|+||||||||||+++|+|.++ |+ +|+|+++|+++.... .++.++|++|++.+++
T Consensus 16 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~ 92 (246)
T PRK14269 16 QALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKI---DGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV 92 (246)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCC---ceEEEECCEecccCCHHHHhhhEEEEecCCcccc
Confidence 49999999999999999999999999999999999975 45 899999999876532 2457999999987776
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.||+||+.++...++.... .......++.+++.+||........ ++
T Consensus 93 -~tv~eni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~ 138 (246)
T PRK14269 93 -KSIYENISYAPKLHGMIKN--------------------------------KDEEEALVVDCLQKVGLFEEVKDKL-KQ 138 (246)
T ss_pred -ccHHHHhhhHHhhcCcccC--------------------------------hHHHHHHHHHHHHHcCCChhhhHHh-cC
Confidence 6999999986543221000 0001123456788888853211111 23
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
..+.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+++|+|++|+
T Consensus 139 ~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~ 215 (246)
T PRK14269 139 NALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--HN-LSMIMVTHNMQQGKRVADYTAFFH 215 (246)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--CC-CEEEEEecCHHHHHhhCcEEEEEE
Confidence 456799999999999999999999999999999999999999999999874 24 455667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~g~~~~~~ 229 (246)
T PRK14269 216 LGELIEFGESKEFF 229 (246)
T ss_pred CCEEEEECCHHHHH
Confidence 99999999988763
No 445
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=322.34 Aligned_cols=216 Identities=19% Similarity=0.231 Sum_probs=175.4
Q ss_pred CceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEE
Q 000913 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITI 929 (1226)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i 929 (1226)
+..+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..... +.+|+|.+
T Consensus 18 ~~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (274)
T PRK14265 18 HSVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLY 84 (274)
T ss_pred CceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEE
Confidence 33688999998874 246999999999999999999999999999999999975321 24799999
Q ss_pred cCccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccc
Q 000913 930 SGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLV 1000 (1226)
Q Consensus 930 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~ 1000 (1226)
+|.++.. ..+++.++|++|++.+++. ||.||+.+....+. .. ...++.+.++++.+++.. ..+..
T Consensus 85 ~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~- 158 (274)
T PRK14265 85 RDRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK- 158 (274)
T ss_pred CCEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC-
Confidence 9987531 2345679999999887764 99999988643321 11 122344677888888742 22332
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEE
Q 000913 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1080 (1226)
Q Consensus 1001 g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~l 1080 (1226)
+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++
T Consensus 159 ----~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~ 232 (274)
T PRK14265 159 ----GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAF 232 (274)
T ss_pred ----cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEE
Confidence 467999999999999999999999999999999999999999999999865 799999999987 58889999999
Q ss_pred Ee--------cCcEEEEeCCC
Q 000913 1081 MK--------RGGQEIYVGPL 1093 (1226)
Q Consensus 1081 l~--------~Gg~~~y~G~~ 1093 (1226)
|+ +.|++++.|+.
T Consensus 233 l~~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 233 FNTEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred EecccccccccCceEEEeCCH
Confidence 97 25899999986
No 446
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.5e-33 Score=354.30 Aligned_cols=213 Identities=27% Similarity=0.411 Sum_probs=178.0
Q ss_pred CceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc
Q 000913 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1226)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1226)
...++++||+|.|+. +++.+|+|+|++++||+.+||+|+||||||||+++|+|... +.+|+|.+||.
T Consensus 453 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~ 519 (694)
T TIGR01846 453 RGAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGV 519 (694)
T ss_pred CCeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCE
Confidence 346999999999852 22458999999999999999999999999999999999876 56899999999
Q ss_pred cCCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCC
Q 000913 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGL 1002 (1226)
Q Consensus 933 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~ 1002 (1226)
++.+ ..+++.++||+|++.+++ .|++||+.++. ++.+. +.+.++++..++.+. .|+.+|.
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCH----HHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 8653 457788999999988876 59999998641 12222 346677777776554 3445555
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
. ..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +|+|+|+++|+++ ..+.+|++++|+
T Consensus 590 ~-g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~ 665 (694)
T TIGR01846 590 K-GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE 665 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe
Confidence 4 46899999999999999999999999999999999999999999999984 5899999999986 456799999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |+++..|+.
T Consensus 666 ~-G~i~~~g~~ 675 (694)
T TIGR01846 666 K-GQIAESGRH 675 (694)
T ss_pred C-CEEEEeCCH
Confidence 6 799999974
No 447
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=6.1e-35 Score=323.57 Aligned_cols=209 Identities=25% Similarity=0.394 Sum_probs=162.5
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++. +.+.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 56778777631 12458999999999999999999999999999999999876 468999999986532
Q ss_pred ---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHH-----HHHHHHHHHc--CCCcccccccCCCCCC
Q 000913 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRK-----MFIDEVMELV--ELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~g~~~~~ 1006 (1226)
..+++.++|++|++.+++ .||.||+.+... ........ ...++.++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 334567999999987765 699999987421 11111110 0112233333 333222222 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++.. + +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLST-V-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-HhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999986 48999999999873 4 56999999986 78
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9999874
No 448
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2e-34 Score=316.70 Aligned_cols=209 Identities=22% Similarity=0.347 Sum_probs=170.2
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478899988763 2469999999999999999999999999999999999865 5689999999765
Q ss_pred Ch---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCH
Q 000913 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLST 1010 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~LSg 1010 (1226)
.. ..+++.++|++|++.+++ .||+||+.+....+.. . ..++.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 234567899999988876 4999999885433221 1 1134577899999995 355554 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 000913 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1226)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y 1089 (1226)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|.|||+++|+++. + +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHh
Confidence 999999999999999999999999999999999999999999875 48999999999863 4 56999999964443343
Q ss_pred eC
Q 000913 1090 VG 1091 (1226)
Q Consensus 1090 ~G 1091 (1226)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 33
No 449
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=324.19 Aligned_cols=213 Identities=22% Similarity=0.270 Sum_probs=174.4
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1226)
.++++++++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999988773 24699999999999999999999999999999999998642 13589999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++. ||+||+.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87531 2346679999999887775 99999988654332 122 23456889999999853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEE-EE
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LM 1081 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~-ll 1081 (1226)
+..|||||||||+||++|+.+|+||||||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 457999999999999999999999999999999999999999999999976 489999999986 4777899975 56
Q ss_pred ecCcEEEEeCCC
Q 000913 1082 KRGGQEIYVGPL 1093 (1226)
Q Consensus 1082 ~~Gg~~~y~G~~ 1093 (1226)
++ |+++..|+.
T Consensus 254 ~~-G~i~~~g~~ 264 (285)
T PRK14254 254 TG-GELVEFDDT 264 (285)
T ss_pred eC-CEEEEeCCH
Confidence 65 789988874
No 450
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.4e-35 Score=365.36 Aligned_cols=210 Identities=24% Similarity=0.401 Sum_probs=176.2
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++|+||++.++ +++.+|+|+|++++||+++||+|+||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999986543 1246899999999999999999999999999999999987 3 47999999987
Q ss_pred CCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 000913 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 1003 (1226)
+.+ ..+++.++||+|++.++. -|++||+.++. ++.++ +.++++++..++.+. .|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 643 567888999999998886 59999998852 22333 346777777777653 35566665
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
| ..||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 3 5799999999999999999999999999999999999999999999885 5899999999985 5678999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 799988873
No 451
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=8.1e-34 Score=317.67 Aligned_cols=202 Identities=23% Similarity=0.273 Sum_probs=165.2
Q ss_pred EeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCceeEEEEcCccCCCCCc-cceEEEecCCCC--CCC
Q 000913 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDN--HIG 239 (1226)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~--~~~ 239 (1226)
+|+|+|+.+++|++++|+||||||||||+++|+|.++| + +|+|.++|.++..... ++.++||+|++. +.+
T Consensus 18 il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~ 94 (254)
T PRK10418 18 LVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNP 94 (254)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccCc
Confidence 89999999999999999999999999999999999988 6 9999999998754322 257999999864 446
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc---cccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV---CADTMV 316 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~v 316 (1226)
.+|+.+++.+.+...+... ....+..+++.+||.+ ..++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-- 136 (254)
T PRK10418 95 LHTMHTHARETCLALGKPA------------------------------------DDATLTAALEAVGLENAARVLKL-- 136 (254)
T ss_pred cccHHHHHHHHHHHcCCCh------------------------------------HHHHHHHHHHHcCCCChhhhhhc--
Confidence 6899999876443221100 0023456788889875 2333
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEE
Q 000913 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1226)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1226)
.+..|||||||||+||+||+.+|++|||||||+|||+.+...+.+.|+++++. .+++|+.++|+..++.+++|+++
T Consensus 137 ---~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~ 212 (254)
T PRK10418 137 ---YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVA 212 (254)
T ss_pred ---CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEE
Confidence 34579999999999999999999999999999999999999999999987653 34455567788888999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000913 397 LLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1226)
+|++|++++.|+.+++.
T Consensus 213 ~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 213 VMSHGRIVEQGDVETLF 229 (254)
T ss_pred EEECCEEEEecCHHHHh
Confidence 99999999999988764
No 452
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=319.17 Aligned_cols=210 Identities=20% Similarity=0.311 Sum_probs=164.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+...+|+|+++|.++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 49999999999999999999999999999999999987 3212389999999987431 1235799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+. ||+||+.|.....+..... +....++.+++.+|+.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~~---------------------------------~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNKK---------------------------------KLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCHH---------------------------------HHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 9999998865432210000 01123455677778753211111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
...+.||||||||++||++|+.+|+++||||||+|||+.++..+.+.|+++. .+. +||.++|+..++.+++|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~~-tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--EKY-TIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--cCC-EEEEEEcCHHHHHHhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999874 244 4555777888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999998764
No 453
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=351.91 Aligned_cols=206 Identities=25% Similarity=0.333 Sum_probs=174.3
Q ss_pred eEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhcceeeEeecCCCCCCCC
Q 000913 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQNDIHSPFV 956 (1226)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~~l 956 (1226)
+.+|+||||++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++.+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 469999999999999999999999999999999999876 468999999987532 22346799999999888899
Q ss_pred CHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000913 957 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1226)
Q Consensus 957 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTs 1036 (1226)
||+||+.+..........+.++..+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++|||||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123344567889999999987777663 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCc
Q 000913 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1226)
Q Consensus 1037 gLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~~~ 1095 (1226)
|||+.++..+++.|++++++|+|||+++|++. ++.+.||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999888999999999986 57788999999986 79999998643
No 454
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.6e-34 Score=309.10 Aligned_cols=179 Identities=26% Similarity=0.332 Sum_probs=151.5
Q ss_pred ceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hhhcceeeEeecCCC-CC
Q 000913 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-----ETFARISGYCEQNDI-HS 953 (1226)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~ 953 (1226)
++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3469999999999999999999999999999999999876 468999999987531 134567999999973 23
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000913 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1226)
Q Consensus 954 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDE 1033 (1226)
...||+||+.+..... ..+.++..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3479999999865332 1233444566889999999988777763 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCc
Q 000913 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1068 (1226)
Q Consensus 1034 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~ 1068 (1226)
||+|||+.++..+.+.|+++.++|+|||+++|++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999975
No 455
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-34 Score=317.63 Aligned_cols=210 Identities=21% Similarity=0.342 Sum_probs=165.2
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 17 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14262 17 KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPF 96 (250)
T ss_pred eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccC
Confidence 4899999999999999999999999999999999998741 01289999999887532 1246799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+ +||+||+.++....+.... + .....++.+++.+|+....+.. .+
T Consensus 97 ~-~tv~e~l~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~-~~ 141 (250)
T PRK14262 97 P-MSIYDNVAFGPRIHGVKSK-H--------------------------------KLDRIVEESLKKAALWDEVKSE-LN 141 (250)
T ss_pred c-ccHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCchhHHH-Hh
Confidence 7 8999999986533211000 0 0011245567777775321111 23
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..+.+||||||||++||+||+.+|++++|||||+|||..+...+.+.|+++.. + ++|+.++|+..++.+++|+|++|
T Consensus 142 ~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~~l 218 (250)
T PRK14262 142 KPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIAFM 218 (250)
T ss_pred CChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEEEE
Confidence 44567999999999999999999999999999999999999999999998742 4 45566778888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 219 YRGELIEYGPTREIV 233 (250)
T ss_pred ECCEEEEecCHHHHH
Confidence 999999999988764
No 456
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=322.24 Aligned_cols=215 Identities=21% Similarity=0.216 Sum_probs=173.7
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1226)
.+.++|+++.++ ++.+|+|+|++|++|+++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 588999998874 2358999999999999999999999999999999999754 1 13689999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC----cccccccCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 1002 (1226)
.++.. ..+++.++|++|++.+++ .||+||+.+....+. ..+.+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87631 234567999999988777 499999998653321 112222344567777777543 222332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1003 ~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 799999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000913 1083 RGGQEIYVGPL 1093 (1226)
Q Consensus 1083 ~Gg~~~y~G~~ 1093 (1226)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 6 689998874
No 457
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=7.3e-34 Score=317.92 Aligned_cols=220 Identities=25% Similarity=0.316 Sum_probs=175.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++++++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478899988763 2469999999999999999999999999999999999621124689999999875
Q ss_pred Ch---hhhcc-eeeEeecCCCCCCCCCHHHHHHHHHHhhcC----CCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 000913 935 KQ---ETFAR-ISGYCEQNDIHSPFVTIYESLLFSAWLRLS----PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1226)
Q Consensus 935 ~~---~~~~~-~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 1005 (1226)
.. ....+ .++|++|++.+++.+|+.|++.+....... ......+..+.+.++++.+++. ...+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 43 12223 478999999999999999998875432110 1112223345678899999996 34554432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCeEEEEecC
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1084 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~-~D~v~ll~~G 1084 (1226)
..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|+++. +... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEeC-
Confidence 2499999999999999999999999999999999999999999999998779999999999863 5555 899999985
Q ss_pred cEEEEeCCC
Q 000913 1085 GQEIYVGPL 1093 (1226)
Q Consensus 1085 g~~~y~G~~ 1093 (1226)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 799999975
No 458
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-34 Score=317.10 Aligned_cols=210 Identities=21% Similarity=0.348 Sum_probs=164.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++||+|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 49999999999999999999999999999999999853 4212389999999887431 1245799999988777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+ +||+||+.++....+.... + .....++.+++.+++.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK-Q--------------------------------VLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCchhHHHHH-h
Confidence 6 8999999987543221000 0 00122445677777643211111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
+.+..|||||||||+||++|+.+|++|||||||+|||..+...+.+.|+++.+ + ++|+.++|+..++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998743 3 45566778888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 459
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.6e-34 Score=319.69 Aligned_cols=215 Identities=26% Similarity=0.285 Sum_probs=173.5
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 933 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 933 (1226)
.++++|+++.++ .+.+|+|+|+++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 377888888763 2358999999999999999999999999999999999876 468999999876
Q ss_pred ----CCh---hh----hcceeeEeecCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000913 934 ----KKQ---ET----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSL 999 (1226)
Q Consensus 934 ----~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 999 (1226)
... .. .++.++|++|++. +.+.+|+.|++.+..... .. ....+.++.++++++.+++.+ ..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 321 11 2346899999974 345679999987542211 11 111233466889999999963 55554
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeE
Q 000913 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1226)
Q Consensus 1000 ~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v 1078 (1226)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998654 899999999986 477789999
Q ss_pred EEEecCcEEEEeCCC
Q 000913 1079 FLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1079 ~ll~~Gg~~~y~G~~ 1093 (1226)
++|++ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99986 789998874
No 460
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.4e-32 Score=350.19 Aligned_cols=212 Identities=27% Similarity=0.429 Sum_probs=179.2
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++|+||+|+|+. +++.+|+|+|++++|||.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999999852 12468999999999999999999999999999999999877 568999999988
Q ss_pred CCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
+.+ ..+++.++||+|++.+++ .|++||+.++. ++.+. +.++++++..++.+.. |+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYADD----EEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCCH----HHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 653 457888999999998887 59999998741 12332 3467778887776543 4455554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 36799999999999999999999999999999999999999999999886 4899999999986 4678999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 799999973
No 461
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-34 Score=391.77 Aligned_cols=257 Identities=19% Similarity=0.237 Sum_probs=196.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhh-cCC-CCC-cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhH
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDR-VGI-DLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1226)
.+.....+||+.++++.++|.- ...+. ... .-| ..+|+|+||++.|..
T Consensus 1196 ~~~~~~s~eRi~e~~~~~~e~~-----~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~------------------------ 1246 (1495)
T PLN03232 1196 AENSLNSVERVGNYIDLPSEAT-----AIIENNRPVSGWPSRGSIKFEDVHLRYRP------------------------ 1246 (1495)
T ss_pred HHHHHHHHHHHHHHhcCCcccc-----ccccCCCCCCCCCCCCcEEEEEEEEEECC------------------------
Confidence 4567788899999887665510 00000 001 112 357999999999842
Q ss_pred hhhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEe
Q 000913 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1226)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv 231 (1226)
...++|+|+|++|+|||.++|+||+|||||||+++|.|+++|+ +|+|++||.++.+... ++.++||
T Consensus 1247 --------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~IdG~di~~i~~~~lR~~i~iV 1315 (1495)
T PLN03232 1247 --------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELE---KGRIMIDDCDVAKFGLTDLRRVLSII 1315 (1495)
T ss_pred --------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCC---CceEEECCEEhhhCCHHHHHhhcEEE
Confidence 1134999999999999999999999999999999999999998 9999999999987654 5789999
Q ss_pred cCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc
Q 000913 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1226)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1226)
||++.+|. .||||||.++.. ...+.+.++.++. ++ ... +-.++..
T Consensus 1316 pQdp~LF~-gTIr~NL~~~~~-----~sdeei~~al~~a---~l------------------------~~~--I~~lp~G 1360 (1495)
T PLN03232 1316 PQSPVLFS-GTVRFNIDPFSE-----HNDADLWEALERA---HI------------------------KDV--IDRNPFG 1360 (1495)
T ss_pred CCCCeeeC-ccHHHHcCCCCC-----CCHHHHHHHHHHc---CC------------------------HHH--HHhCcCC
Confidence 99887765 699999986421 1222233322221 11 011 1246778
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhh
Q 000913 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1226)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1226)
.||.||+.+. +||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++|+| ++.|.. ++...
T Consensus 1361 Ldt~v~e~G~-~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~--~~~TvI-~IAHRl-~ti~~ 1435 (1495)
T PLN03232 1361 LDAEVSEGGE-NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF--KSCTML-VIAHRL-NTIID 1435 (1495)
T ss_pred CCceecCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CCCEEE-EEeCCH-HHHHh
Confidence 8999998665 599999999999999999999999999999999999999999998753 345554 455554 56667
Q ss_pred cCcEEEEcCCeEEEecChhHHHH
Q 000913 392 FDDIILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1226)
+|+|++|++|+|+++|+++++++
T Consensus 1436 ~DrIlVL~~G~ivE~Gt~~eLl~ 1458 (1495)
T PLN03232 1436 CDKILVLSSGQVLEYDSPQELLS 1458 (1495)
T ss_pred CCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999864
No 462
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=320.77 Aligned_cols=218 Identities=19% Similarity=0.240 Sum_probs=173.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1226)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478899988774 24689999999999999999999999999999999997431 1 2579999999
Q ss_pred ccCC-----hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.++. ...+++.++|++|++.+++ .||+||+.+....+. .. ...++.+.++++.+++.+..+..... .+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQ-SGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcC-Ccc
Confidence 8652 2234567999999988777 499999988653321 11 12334567778888874311111111 145
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec---
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1083 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~--- 1083 (1226)
.||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.||++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999875 589999999987 58899999999982
Q ss_pred -----CcEEEEeCCC
Q 000913 1084 -----GGQEIYVGPL 1093 (1226)
Q Consensus 1084 -----Gg~~~y~G~~ 1093 (1226)
.|++++.|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4799999874
No 463
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=321.32 Aligned_cols=205 Identities=21% Similarity=0.313 Sum_probs=162.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCC-----CccceEEEecCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d 235 (1226)
.+|+|+||+|++|++++|+|||||||||||++|+|.++ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~---~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 103 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSL---KGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQP 103 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCC---ceEEEECCEEcccccCCHHHHhhceEEEccCC
Confidence 49999999999999999999999999999999999987 35 99999999876421 1235699999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
.+++ .||+||+.+++...+... + ....++.+++.+++....+..
T Consensus 104 ~l~~-~tv~enl~~~~~~~~~~~------~-----------------------------~~~~~~~~l~~~~l~~~l~~~ 147 (269)
T PRK14259 104 NPFP-KSIYENIAFGARINGYTG------D-----------------------------MDELVERSLRKAAVWDECKDK 147 (269)
T ss_pred ccch-hhHHHHHhhhhhhcCCcH------H-----------------------------HHHHHHHHHHHhCCcchhhhh
Confidence 8787 599999998764332100 0 001233456666653211111
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
-+..+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++. .+ .+||.++|+..++.+++|++
T Consensus 148 -~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i 223 (269)
T PRK14259 148 -LNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK--KN-FTIVIVTHNMQQAVRVSDMT 223 (269)
T ss_pred -hCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEE
Confidence 123456799999999999999999999999999999999999999999999874 24 45666788889999999999
Q ss_pred EEEcC-----------CeEEEecChhHHH
Q 000913 396 ILLSD-----------GQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~-----------G~iv~~G~~~~~~ 413 (1226)
++|++ |++++.|+++++.
T Consensus 224 ~~l~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 224 AFFNAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred EEEeccccccccccccceEEEeCCHHHHH
Confidence 99996 6789999998874
No 464
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-34 Score=302.28 Aligned_cols=168 Identities=27% Similarity=0.417 Sum_probs=149.0
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ...+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEccc
Confidence 5677777663 2358999999999999999999999999999999999876 468999999987543
Q ss_pred --hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
..+++.++|++|++.+++.+|+.|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888899999863 8999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++. ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877999999999986 477789999999875
No 465
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6.2e-34 Score=305.27 Aligned_cols=170 Identities=41% Similarity=0.673 Sum_probs=148.0
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCC
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1226)
.++|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 45999999999999999999999999999999999999 887 9999999998765334567999999988899999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1226)
++||+.++.++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999764210 0
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecCh-hhHHhhcCcEEEEcCC
Q 000913 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPA-PETYDLFDDIILLSDG 401 (1226)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~-~~~~~~~D~iilL~~G 401 (1226)
.||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++.. .+.|+|+ ++|+. .++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 4999999999999999999999999999999999999999999998754 3556555 45554 4788999999999999
Q ss_pred eEEEec
Q 000913 402 QIVYQG 407 (1226)
Q Consensus 402 ~iv~~G 407 (1226)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 466
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.5e-34 Score=361.35 Aligned_cols=259 Identities=24% Similarity=0.398 Sum_probs=191.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhhhcCCCCC-cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHhh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1226)
.++++..++|+.+.++.+++ .....+....+.+ ...++|+||++.++..
T Consensus 301 ~~~~~~~~~ri~~~l~~~~~-----~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------------------- 350 (576)
T TIGR02204 301 LQRAAGAAERLIELLQAEPD-----IKAPAHPKTLPVPLRGEIEFEQVNFAYPAR------------------------- 350 (576)
T ss_pred HHHHHHHHHHHHHHhCCCCc-----CCCCCCCccCCcCCCceEEEEEEEEECCCC-------------------------
Confidence 45677788888887765433 0000000011112 2359999999998420
Q ss_pred hcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecC
Q 000913 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1226)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q 233 (1226)
..+.+|+|+|++++|||.++|+||||||||||+++|+|.++|. +|+|.+||.++++..+ ++.++||+|
T Consensus 351 ------~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~~~Q 421 (576)
T TIGR02204 351 ------PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ---SGRILLDGVDLRQLDPAELRARMALVPQ 421 (576)
T ss_pred ------CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHHhceEEcc
Confidence 1135999999999999999999999999999999999999998 9999999999877654 367999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000913 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1226)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1226)
++. +.+.|++|||.++.. ....+...++.+. .+ ..+.++ .+++..|
T Consensus 422 ~~~-lf~~Ti~~Ni~~~~~----~~~~~~~~~~l~~---~~------------------------l~~~i~--~l~~gl~ 467 (576)
T TIGR02204 422 DPV-LFAASVMENIRYGRP----DATDEEVEAAARA---AH------------------------AHEFIS--ALPEGYD 467 (576)
T ss_pred CCc-cccccHHHHHhcCCC----CCCHHHHHHHHHH---cC------------------------cHHHHH--hCCCCCC
Confidence 765 556799999987531 1111222221111 00 011222 3566778
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcC
Q 000913 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1226)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1226)
|.+|+.+ ..||||||||++|||+++++|++++||||||+||+.++..+++.|+++. .++|+|+ ++|.. +....+|
T Consensus 468 t~i~~~g-~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~--~~~t~Ii-itH~~-~~~~~~d 542 (576)
T TIGR02204 468 TYLGERG-VTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLM--KGRTTLI-IAHRL-ATVLKAD 542 (576)
T ss_pred ceeCCCC-CcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCC
Confidence 9999864 4699999999999999999999999999999999999999999999863 3455555 45543 5568899
Q ss_pred cEEEEcCCeEEEecChhHHHH
Q 000913 394 DIILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1226)
+|++|++|+++..|+++++.+
T Consensus 543 ~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 543 RIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred EEEEEECCEEEeeecHHHHHH
Confidence 999999999999999988753
No 467
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=4.5e-34 Score=318.35 Aligned_cols=197 Identities=25% Similarity=0.373 Sum_probs=168.3
Q ss_pred EeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhhcceeeEeecCCCCCCCCCHH
Q 000913 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIY 959 (1226)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 959 (1226)
+|+||||++++|++++|+|+||||||||+++|+|... . +|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~--~-~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP--G-SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--C-CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999864 3 7999999987532 23445689999998888889999
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 000913 960 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1032 (1226)
Q Consensus 960 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqrl~ia~~L~~-------~p~il~LD 1032 (1226)
||+.+.... ....++..+.++++++.++|.+..++.+ ..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1122333566889999999987766653 5799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 000913 1033 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1033 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~~~y~G~~ 1093 (1226)
|||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999986 47889999999986 689998875
No 468
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=317.93 Aligned_cols=207 Identities=18% Similarity=0.272 Sum_probs=162.1
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCCC-----ccceEEEecCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHD 235 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d 235 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++ |+ +|+|.++|.++.... .++.++|++|++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 111 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQKP 111 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecCC
Confidence 49999999999999999999999999999999999864 45 899999999875321 235799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1226)
.+++. ||+||+.++....+.... . ..+..+...++.+++.......
T Consensus 112 ~~~~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~ 157 (268)
T PRK14248 112 NPFPK-SIYNNITHALKYAGERRK-S--------------------------------VLDEIVEESLTKAALWDEVKDR 157 (268)
T ss_pred ccCcc-cHHHHHHHHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCcchHHH
Confidence 77774 999999886432211000 0 0011234456667764211111
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
-+..+..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.. + ++|+.++|+..++.+++|+|
T Consensus 158 -~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v 233 (268)
T PRK14248 158 -LHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRT 233 (268)
T ss_pred -HhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEE
Confidence 1234557999999999999999999999999999999999999999999998743 3 45666778888899999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000913 396 ILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1226)
++|++|++++.|+.+++.
T Consensus 234 ~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 234 AFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 469
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-34 Score=319.68 Aligned_cols=212 Identities=28% Similarity=0.372 Sum_probs=168.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCceeEEEEcCccCCCCCc---cceEEEecCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT-----LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNH 237 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~ 237 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++..
T Consensus 15 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~~ 94 (272)
T PRK13547 15 AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQP 94 (272)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCCC
Confidence 4999999999999999999999999999999999999874 1137999999998754332 3468999998776
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000913 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1226)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1226)
++.+||+||+.++......... . . ..+....++.+++.+||+...++.
T Consensus 95 ~~~~tv~e~l~~~~~~~~~~~~--~-------------~---------------~~~~~~~~~~~l~~~~l~~~~~~~-- 142 (272)
T PRK13547 95 AFAFSAREIVLLGRYPHARRAG--A-------------L---------------THRDGEIAWQALALAGATALVGRD-- 142 (272)
T ss_pred CCCCcHHHHHhhcccccccccc--c-------------C---------------CHHHHHHHHHHHHHcCcHhhhcCC--
Confidence 6779999999875311000000 0 0 000112356788899998655544
Q ss_pred ccccCCCChhHhhHHHHHHHHh---------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhH
Q 000913 318 DEMIRGISGGQKKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1226)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~---------~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~ 388 (1226)
+..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+..+ ++|+.++|+..++
T Consensus 143 ---~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tviiisH~~~~~ 218 (272)
T PRK13547 143 ---VTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN-LGVLAIVHDPNLA 218 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHH
Confidence 4569999999999999999 59999999999999999999999999998765324 4455577888889
Q ss_pred HhhcCcEEEEcCCeEEEecChhHHH
Q 000913 389 YDLFDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
.+++|++++|++|++++.|+.+++.
T Consensus 219 ~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 219 ARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHhCCEEEEEECCeEEEecCHHHHc
Confidence 9999999999999999999988763
No 470
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=316.04 Aligned_cols=210 Identities=22% Similarity=0.346 Sum_probs=163.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
++|+|+|++|++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 489999999999999999999999999999999998763 111389999999987531 1245799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+ +||+||+.++....+..... +....++.+++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~~---------------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDKK---------------------------------KLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCHH---------------------------------HHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 89999999875433210000 01122445566666642111111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+. +|+.++|+..++.+++|+|++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~-tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--KDY-TIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cCC-eEEEEEeCHHHHHhhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999874 244 4555777888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 471
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=317.35 Aligned_cols=216 Identities=22% Similarity=0.297 Sum_probs=175.1
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC--ce--EEEEEEEc
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GY--ITGNITIS 930 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~~--~~G~i~i~ 930 (1226)
.+.++++++.++ ++.+|+|+||++.+||+++|+|+||||||||+++|+|...+ |. +.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 378889888763 34689999999999999999999999999999999997652 21 23666666
Q ss_pred CccCC---hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCCC
Q 000913 931 GYPKK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGLP 1003 (1226)
Q Consensus 931 g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~~ 1003 (1226)
|.+.. ...+++.++|++|++.+++.+|++||+.+...... ....++.++.+.++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 66542 22356679999999999889999999998643321 1123344566889999999864 23332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. .+.+.||++++|++
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999864 699999999986 47789999999985
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 799988874
No 472
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=317.00 Aligned_cols=219 Identities=21% Similarity=0.263 Sum_probs=176.0
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1226)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+|||||||||++|+|..... +.+|+|.++|
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367888887763 246999999999999999999999999999999999974311 2589999999
Q ss_pred ccCCh-----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000913 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1226)
.++.. ...++.++|++|++.+++. |+.||+.+...... ..+.+..++.+.++++.+++.+........ .+.
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Ccc
Confidence 87532 2345679999999888874 99999987643221 112233456788899999885422122222 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLK-EDYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 799999999999999999999999999999999999999999999986 4899999999987 58889999999986 79
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9999874
No 473
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.8e-34 Score=310.34 Aligned_cols=197 Identities=28% Similarity=0.376 Sum_probs=164.8
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|++..++ ++.+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 56788877663 2469999999999999999999999999999999999866 46899999998753
Q ss_pred hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000913 936 QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1226)
Q Consensus 936 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrqr 1015 (1226)
...+++.++|++|++.+++.+||.||+.+....+. .. ++.+.++++.++|.+..+..+ ..||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22256678999999888888999999987543321 11 234788999999987666553 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++.+ |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~--~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLPG--ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhcc--CcEEeec
Confidence 99999999999999999999999999999999999998878999999999986 3443 8887774
No 474
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.5e-34 Score=316.68 Aligned_cols=205 Identities=27% Similarity=0.428 Sum_probs=157.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1226)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++ ..|
T Consensus 16 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~t 91 (237)
T cd03252 16 VILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NRS 91 (237)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cch
Confidence 4899999999999999999999999999999999999998 9999999987654322 35799999987665 579
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHc--CCcccccccccccc
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL--GLDVCADTMVGDEM 320 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~~ 320 (1226)
|+||+.+... . ...+...+.... ...+.+++.+ +++...+ ..
T Consensus 92 v~~nl~~~~~--~--~~~~~~~~~~~~---------------------------~~~~~~l~~l~~~~~~~~~-----~~ 135 (237)
T cd03252 92 IRDNIALADP--G--MSMERVIEAAKL---------------------------AGAHDFISELPEGYDTIVG-----EQ 135 (237)
T ss_pred HHHHhhccCC--C--CCHHHHHHHHHH---------------------------cCcHHHHHhCcccccchhh-----cC
Confidence 9999987532 1 111111110000 0112234444 4433223 34
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEcC
Q 000913 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1226)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1226)
+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+.| |+.++|+..++ ..+|++++|++
T Consensus 136 ~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~t-iii~sH~~~~~-~~~d~v~~l~~ 211 (237)
T cd03252 136 GAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--AGRT-VIIIAHRLSTV-KNADRIIVMEK 211 (237)
T ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCE-EEEEeCCHHHH-HhCCEEEEEEC
Confidence 56799999999999999999999999999999999999999999999874 3445 55566676776 46999999999
Q ss_pred CeEEEecChhHHHH
Q 000913 401 GQIVYQGPRELVLE 414 (1226)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1226)
|++++.|+.+++.+
T Consensus 212 G~i~~~~~~~~~~~ 225 (237)
T cd03252 212 GRIVEQGSHDELLA 225 (237)
T ss_pred CEEEEEcCHHHHHh
Confidence 99999999887643
No 475
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.3e-34 Score=315.27 Aligned_cols=209 Identities=26% Similarity=0.408 Sum_probs=168.4
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++. ..+.+|+|+|+++++|++++|+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 667888776631 12458999999999999999999999999999999999875 45799999998653
Q ss_pred h---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccC------CCCCC
Q 000913 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVG------LPGVS 1006 (1226)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g------~~~~~ 1006 (1226)
. ...++.++|++|++.+++ .||.|++.+... ... ++.+.++++.+++.+..+..+. ...+.
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 234567999999988776 699999976421 111 2235678888888776665431 01235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++.. .+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~--~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL--LDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH--HHhCCEEEEEeC-Ce
Confidence 79999999999999999999999999999999999999999999998764 899999999863 479999999986 67
Q ss_pred EEEeC
Q 000913 1087 EIYVG 1091 (1226)
Q Consensus 1087 ~~y~G 1091 (1226)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 77654
No 476
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=315.22 Aligned_cols=207 Identities=23% Similarity=0.334 Sum_probs=163.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
++|+|+|+.|++|++++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14272 18 QAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNPF 97 (252)
T ss_pred EeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCccC
Confidence 49999999999999999999999999999999999987631 1379999999887531 1245799999999899
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc----ccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1226)
+.+||+||+.++....+... .+. ....++.+++.+++. +..++
T Consensus 98 ~~~t~~enl~~~~~~~~~~~-~~~--------------------------------~~~~~~~~l~~~~l~~~l~~~~~~ 144 (252)
T PRK14272 98 PTMSVFDNVVAGLKLAGIRD-RDH--------------------------------LMEVAERSLRGAALWDEVKDRLKT 144 (252)
T ss_pred cCCCHHHHHHHHHHhcCCCC-HHH--------------------------------HHHHHHHHHHHcCcchhhhhhhcC
Confidence 99999999987653221100 000 011223344455443 22333
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
.++.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++. .+ ++|+.++|+..++.+.+|+
T Consensus 145 -----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~ 216 (252)
T PRK14272 145 -----PATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK--KV-TTIIIVTHNMHQAARVSDT 216 (252)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCE
Confidence 345799999999999999999999999999999999999999999999874 24 5556677888899999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000913 395 IILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1226)
|++|++|++++.|+++++.
T Consensus 217 i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 217 TSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 477
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=318.61 Aligned_cols=210 Identities=25% Similarity=0.330 Sum_probs=167.0
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCCC----ccceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV----PQRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~~----~~~~~~yv~Q~d~~~~ 239 (1226)
++|+|+|+.|++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++.+.. .++.++|++|++.+++
T Consensus 35 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~~ 114 (276)
T PRK14271 35 TVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFP 114 (276)
T ss_pred EEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccCC
Confidence 4999999999999999999999999999999999998751 012899999998875431 2467999999887777
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
+||+||+.++...... ... .+....+..+++.+||....++.. +.
T Consensus 115 -~tv~eni~~~~~~~~~-~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~~ 159 (276)
T PRK14271 115 -MSIMDNVLAGVRAHKL-VPR--------------------------------KEFRGVAQARLTEVGLWDAVKDRL-SD 159 (276)
T ss_pred -ccHHHHHHHHHHhccC-CCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-hC
Confidence 8999999886432110 000 001112355677888865332222 23
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
.+..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.. + ++||.++|+..++.+++|++++|+
T Consensus 160 ~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l~ 236 (276)
T PRK14271 160 SPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALFF 236 (276)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4567999999999999999999999999999999999999999999998753 3 455667888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000913 400 DGQIVYQGPRELVL 413 (1226)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1226)
+|++++.|+++++.
T Consensus 237 ~G~i~~~g~~~~~~ 250 (276)
T PRK14271 237 DGRLVEEGPTEQLF 250 (276)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999998774
No 478
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.2e-33 Score=315.49 Aligned_cols=219 Identities=26% Similarity=0.311 Sum_probs=171.2
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1226)
++++|+++.++ .+.+|+|+|+.|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.++.
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56788887764 24699999999999999999999999999999999998421146899999998753
Q ss_pred h---hh-hcceeeEeecCCCCCCCCCHHHHHHHHH-HhhcC-C--CCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000913 936 Q---ET-FARISGYCEQNDIHSPFVTIYESLLFSA-WLRLS-P--EVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1226)
Q Consensus 936 ~---~~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~-~lr~~-~--~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1226)
. .. .++.++|++|++.+++.+|+.+++.+.. .++.. . .....+..++++++++.+++. +..+..+ ..
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 2 11 2346999999998888888777654321 11110 0 012223356678899999984 3444432 13
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCeEEEEecCc
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1085 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~-~D~v~ll~~Gg 1085 (1226)
.|||||||||+||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|++.. +... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEEEEEEC-C
Confidence 699999999999999999999999999999999999999999999998778999999999863 5555 899999985 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 89999875
No 479
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=319.68 Aligned_cols=209 Identities=24% Similarity=0.324 Sum_probs=164.0
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++. .++.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhh
Confidence 56777776631 11358999999999999999999999999999999999876 468999999976532
Q ss_pred ---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHH-----HHHHHHHHHc--CCCcccccccCCCCCC
Q 000913 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRK-----MFIDEVMELV--ELNPLRQSLVGLPGVS 1006 (1226)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~g~~~~~ 1006 (1226)
...++.++|++|++.+++ .||+||+.+.... ....... ..+++.++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 334567999999988776 6999999875321 1111111 1233444444 444444433 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|.|||+++|++. ++. .+|++++|++ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~~-~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TIE-NADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HHh-hCCEEEEecC-Ce
Confidence 799999999999999999999999999999999999999999999986 4899999999986 354 5999999987 68
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
+++.|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 8888764
No 480
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.7e-34 Score=321.75 Aligned_cols=210 Identities=19% Similarity=0.283 Sum_probs=173.9
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++. +...+|+|||++|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4788999988852 12358999999999999999999999999999999999874 369999999876
Q ss_pred Ch---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCC------CCC
Q 000913 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGL------PGV 1005 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~------~~~ 1005 (1226)
.. ...++.++||+|++.+++ .||+||+.... ... ++.++++++.++|.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 345677999999998887 49999996321 111 23467888999998766655431 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|+++. .++|||+++|+++ .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 5899999999985 34 45999999986 7
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|++
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 99999985
No 481
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=317.27 Aligned_cols=210 Identities=21% Similarity=0.316 Sum_probs=164.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
++|+|+|+.|++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 4899999999999999999999999999999999998740 01289999999987531 1246799999998878
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+. ||+||+.+.....+.... + .....++.+++.+++.....+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINNR-R--------------------------------VLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 999999887543321000 0 00112455667777753211111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..+..|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|++++. +. +|+.++|+..++.+.+|+|++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~~-tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--KY-TIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CC-eEEEEeCCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 44 4555778888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+.+++.
T Consensus 241 ~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 241 YMGKLVEYGDTDTLF 255 (272)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988763
No 482
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=314.70 Aligned_cols=210 Identities=20% Similarity=0.330 Sum_probs=163.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
++|+|+|+.|++|++++|+|||||||||||++|+|.++ |....+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14251 18 EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTPF 97 (251)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCccC
Confidence 49999999999999999999999999999999999986 2111289999999886431 1245799999988777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+ .||+||+.++....+.... + .....++.+++.+++........ +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14251 98 P-FSVYDNVAYGLKIAGVKDK-----E----------------------------LIDQRVEESLKQAAIWKETKDNL-D 142 (251)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-----H----------------------------HHHHHHHHHHHHcCCCcchHHHh-c
Confidence 5 7999999886533211100 0 00122455677778742110011 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
.....||||||||++||++|+.+|+++||||||+|||+.+...+.+.|+++. .+ ++||.++|+..++.+++|+|++|
T Consensus 143 ~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 219 (251)
T PRK14251 143 RNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK--HQ-YTFIMVTHNLQQAGRISDQTAFL 219 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH--cC-CeEEEEECCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 23 45666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|+++..|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 220 MNGDLIEAGPTEEMF 234 (251)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 483
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-34 Score=302.64 Aligned_cols=170 Identities=29% Similarity=0.423 Sum_probs=149.8
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ ++.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5677776653 2469999999999999999999999999999999999876 468999999987532
Q ss_pred -----hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000913 937 -----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1226)
Q Consensus 937 -----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgG 1011 (1226)
..+++.++|++|++.+++..|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23567799999999888889999987642 8999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEecC
Q 000913 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1226)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~p~~~i~~~~D~v~ll~~G 1084 (1226)
||||++||++|+.+|++++|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877 899999999986 467789999999864
No 484
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=316.31 Aligned_cols=217 Identities=21% Similarity=0.240 Sum_probs=175.8
Q ss_pred CceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEE
Q 000913 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITI 929 (1226)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i 929 (1226)
+..++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ + +.+|+|.+
T Consensus 14 ~~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~ 80 (265)
T PRK14252 14 QQKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIIL 80 (265)
T ss_pred CceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEE
Confidence 34588999998874 24699999999999999999999999999999999998652 1 26899999
Q ss_pred cCccCC-------hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccc
Q 000913 930 SGYPKK-------QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQS 998 (1226)
Q Consensus 930 ~g~~~~-------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~ 998 (1226)
+|.+.. ...+++.++|++|++.+++. ||+||+.+....... ......++.+.++++.+++.+ ..+.
T Consensus 81 ~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~ 157 (265)
T PRK14252 81 HPDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGV--KRRSILEERVENALRNAALWDEVKDRLGD 157 (265)
T ss_pred cCccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCC--ChHHHHHHHHHHHHHHcCCchhhhHHHhC
Confidence 987542 12345679999999988875 999999876432211 111223456778888888742 2233
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeE
Q 000913 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1078 (1226)
Q Consensus 999 ~~g~~~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v 1078 (1226)
. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++
T Consensus 158 ~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i 230 (265)
T PRK14252 158 L-----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYT 230 (265)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEE
Confidence 3 357999999999999999999999999999999999999999999999865 699999999986 477899999
Q ss_pred EEEecCcEEEEeCCC
Q 000913 1079 FLMKRGGQEIYVGPL 1093 (1226)
Q Consensus 1079 ~ll~~Gg~~~y~G~~ 1093 (1226)
++|++ |+++..|+.
T Consensus 231 ~~l~~-G~i~~~g~~ 244 (265)
T PRK14252 231 AYMYM-GELIEFGAT 244 (265)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 789988874
No 485
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=314.94 Aligned_cols=209 Identities=22% Similarity=0.326 Sum_probs=162.9
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCC-C---CccceEEEecCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDE-F---VPQRTAAYISQHDNHIG 239 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~nG~~~~~-~---~~~~~~~yv~Q~d~~~~ 239 (1226)
.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++.. . ..++.++|++|++.+++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 96 (249)
T PRK14253 17 QALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPFP 96 (249)
T ss_pred eeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcCc
Confidence 49999999999999999999999999999999999987520 128999999987642 1 12457999999988787
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000913 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1226)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1226)
.||+||+.++....+.... + .....++..++.+|+.+...... +.
T Consensus 97 -~tv~~~l~~~~~~~~~~~~-~--------------------------------~~~~~~~~~~~~~~l~~~~~~~~-~~ 141 (249)
T PRK14253 97 -MSIYENVAYGLRAQGIKDK-K--------------------------------VLDEVVERSLRGAALWDEVKDRL-KS 141 (249)
T ss_pred -ccHHHHHHhHHHhcCCCch-H--------------------------------HHHHHHHHHHHHcCCchhhhHHh-hc
Confidence 8999999886533211000 0 00112344566666643211111 23
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEEc
Q 000913 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1226)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1226)
....|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.+ + ++|+.++|+..++.+.+|++++|+
T Consensus 142 ~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l~ 218 (249)
T PRK14253 142 HAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFFL 218 (249)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999998753 3 455557778889999999999999
Q ss_pred CCeEEEecChhHH
Q 000913 400 DGQIVYQGPRELV 412 (1226)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1226)
+|++++.|+.+++
T Consensus 219 ~G~i~~~g~~~~~ 231 (249)
T PRK14253 219 MGELVEHDDTQVI 231 (249)
T ss_pred CCEEEEeCCHHHH
Confidence 9999999998765
No 486
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2e-34 Score=319.74 Aligned_cols=210 Identities=28% Similarity=0.404 Sum_probs=162.3
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++.. +++.+|+|+||++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~~----------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPSR----------PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCCC----------CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 467777765311 12458999999999999999999999999999999999876 468999999976532
Q ss_pred ---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccc-------cCCCCCC
Q 000913 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSL-------VGLPGVS 1006 (1226)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~-------~g~~~~~ 1006 (1226)
...++.++|++|++.+++ .||+|++.+....+ ..+ .+++.++..++.+..+.+ .. ..+.
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 234566999999988776 69999998742111 111 122333333333221111 11 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 000913 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1226)
Q Consensus 1007 ~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg~ 1086 (1226)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++.. + +.||++++|++ |+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~-~-~~~d~v~~l~~-G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLST-I-RNADLIAVLQN-GQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-hhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999987 79999999999863 4 48999999987 68
Q ss_pred EEEeCCC
Q 000913 1087 EIYVGPL 1093 (1226)
Q Consensus 1087 ~~y~G~~ 1093 (1226)
+++.|+.
T Consensus 215 i~~~~~~ 221 (238)
T cd03249 215 VVEQGTH 221 (238)
T ss_pred EEEeCCH
Confidence 8988874
No 487
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=318.91 Aligned_cols=203 Identities=21% Similarity=0.353 Sum_probs=162.7
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCC-----CccceEEEecCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d 235 (1226)
.+|+|+|+.|++|++++|+|||||||||||++|+|..+ |+ +|+|.++|.++... ..++.++||+|++
T Consensus 53 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 129 (286)
T PRK14275 53 EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQKP 129 (286)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCCC
Confidence 39999999999999999999999999999999999854 35 99999999886432 1245799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc----cc
Q 000913 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VC 311 (1226)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~ 311 (1226)
.+++ .||+||+.|+....+.... + .....+..+++.+|+. +.
T Consensus 130 ~l~~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~ 175 (286)
T PRK14275 130 NPFP-KSIFDNIAYGPRLHGINDK-K--------------------------------QLEEIVEKSLRKAALWDEVSDR 175 (286)
T ss_pred CCCc-cCHHHHHHhHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHhCCccchhhH
Confidence 7777 4999999987543221000 0 0011234556667763 22
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhh
Q 000913 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1226)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1226)
.+ ..+..|||||||||+||+||+.+|++|||||||+|||+.+...+.+.|+++.. + .+||.++|+..++.++
T Consensus 176 ~~-----~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tvIivsH~~~~~~~~ 247 (286)
T PRK14275 176 LD-----KNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--S-YTIMIVTHNMQQASRV 247 (286)
T ss_pred hh-----CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHh
Confidence 23 33557999999999999999999999999999999999999999999998743 3 4566678888999999
Q ss_pred cCcEEEEcCCeEEEecChhHHH
Q 000913 392 FDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
+|++++|++|++++.|+++++.
T Consensus 248 ~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 248 SDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988764
No 488
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=5.2e-34 Score=307.23 Aligned_cols=194 Identities=24% Similarity=0.292 Sum_probs=161.2
Q ss_pred EEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000913 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1226)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1226)
+++|+++.++ .+.+|+|+|+++++|++++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEccc
Confidence 4667776653 3469999999999999999999999999999999999876 468999999987532
Q ss_pred --hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000913 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1226)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~LSgGqrq 1014 (1226)
..+++.++|++|++.+++.+||.|++.+....+. . + ++.+.++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2345678999999888888999999987643321 1 1 235788999999988776654 569999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEE
Q 000913 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1080 (1226)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~l 1080 (1226)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|++.. + .+++++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~-~--~~~~~~~ 197 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLG-L--VEARELR 197 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccc-c--cceEEee
Confidence 9999999999999999999999999999999999999987789999999999852 2 3466553
No 489
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=314.14 Aligned_cols=211 Identities=21% Similarity=0.324 Sum_probs=165.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCCC-----ccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1226)
++|+|+||.|++|++++|+||||||||||+++|+|..+ |+...+|+|+++|.++.... .++.++|++|++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 98 (251)
T PRK14244 19 QILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNPF 98 (251)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcccc
Confidence 49999999999999999999999999999999999976 21112899999998764321 246799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+. ||+||+.++....+..... .+....++.+++.+||.+...+.+ +
T Consensus 99 ~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (251)
T PRK14244 99 PK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRL-K 144 (251)
T ss_pred cC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-h
Confidence 75 9999998864322110000 001123456788889865322222 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..+..|||||||||+||++|+.+|+++||||||+|||..+...+.+.|+++. .+ .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 221 (251)
T PRK14244 145 DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--KN-FTIIVVTHSMKQAKKVSDRVAFF 221 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999873 34 45555778888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000913 399 SDGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1226)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 222 QSGRIVEYNTTQEIF 236 (251)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988763
No 490
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=314.94 Aligned_cols=212 Identities=22% Similarity=0.297 Sum_probs=167.6
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|+..++
T Consensus 21 ~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l~ 100 (261)
T PRK14258 21 KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNLF 100 (261)
T ss_pred eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCccC
Confidence 4899999999999999999999999999999999999873 12479999999886321 1245799999988777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+ +||+||+.+.....+.... .+....+..+++.+++.+..+... +
T Consensus 101 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 145 (261)
T PRK14258 101 P-MSVYDNVAYGVKIVGWRPK---------------------------------LEIDDIVESALKDADLWDEIKHKI-H 145 (261)
T ss_pred c-ccHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCcchhhhHh-c
Confidence 7 8999999886432211000 001123456777888754222111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
+.+..||||||||++||++|+.+|++++|||||+|||..+...+.+.|++++...+ ++||.++|+..++.+++|+|++|
T Consensus 146 ~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~-~tiiivsH~~~~i~~~~d~i~~l 224 (261)
T PRK14258 146 KSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSE-LTMVIVSHNLHQVSRLSDFTAFF 224 (261)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCC-CEEEEEECCHHHHHHhcCEEEEE
Confidence 34567999999999999999999999999999999999999999999998764334 45555778889999999999999
Q ss_pred cC-----CeEEEecChhHHH
Q 000913 399 SD-----GQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~~-----G~iv~~G~~~~~~ 413 (1226)
++ |+++++|+++++.
T Consensus 225 ~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 225 KGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred ccCCCcCceEEEeCCHHHHH
Confidence 99 9999999999874
No 491
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=359.23 Aligned_cols=213 Identities=22% Similarity=0.319 Sum_probs=179.1
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++++|++|.++. .++.+|+|+|++|++|+++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999877 568999999988
Q ss_pred CCh---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 000913 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1226)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 1003 (1226)
.++ ..+++.++||+|++.+++ -|++||+.++. +...+ ++.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 653 456788999999998886 69999998741 11122 2346778888876553 35556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
...||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|||+++|+++ ..+.||++++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 36799999999999999999999999999999999999999999999885 4799999999985 5778999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 799999874
No 492
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-34 Score=317.34 Aligned_cols=211 Identities=25% Similarity=0.375 Sum_probs=166.5
Q ss_pred eeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000913 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1226)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1226)
.++++|+++.++. .+.+|+|+|+++++|++++|+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYDE------------KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecCC------------CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 4678888877631 2358999999999999999999999999999999999876 4689999999765
Q ss_pred Ch---hhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccccccc-C-----CCCC
Q 000913 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLV-G-----LPGV 1005 (1226)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~-g-----~~~~ 1005 (1226)
.. ..+++.++|++|++.+++. |++||+.+... ... ...+.+.++.+++.+..+... | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2356679999999887775 99999987421 111 122444555555544333221 0 0124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEecCc
Q 000913 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1226)
Q Consensus 1006 ~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~Gg 1085 (1226)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||++.. + +.+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLST-I-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999985 58999999999863 4 56999999986 6
Q ss_pred EEEEeCCC
Q 000913 1086 QEIYVGPL 1093 (1226)
Q Consensus 1086 ~~~y~G~~ 1093 (1226)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88888763
No 493
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-35 Score=294.35 Aligned_cols=212 Identities=25% Similarity=0.358 Sum_probs=183.5
Q ss_pred cccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc---ceEEEecCCCCCC
Q 000913 162 KRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHI 238 (1226)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~~---~~~~yv~Q~d~~~ 238 (1226)
...+.||+|+|..|++|.+|+++|||||||||||.+++++++.+ +|+|+++|.++.....+ +.++.+-|+....
T Consensus 11 y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~ 87 (252)
T COG4604 11 YGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQENHIN 87 (252)
T ss_pred hCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhhchhh
Confidence 35567999999999999999999999999999999999999988 99999999998776543 6788899988888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
..+||+|-+.|+.--..-|. ...+.+..++..++.|.|++..|.
T Consensus 88 ~rlTV~dLv~FGRfPYSqGR--------------------------------lt~eD~~~I~~aieyl~L~~l~dr---- 131 (252)
T COG4604 88 SRLTVRDLVGFGRFPYSQGR--------------------------------LTKEDRRIINEAIEYLHLEDLSDR---- 131 (252)
T ss_pred heeEHHHHhhcCCCcccCCC--------------------------------CchHHHHHHHHHHHHhcccchHHH----
Confidence 89999999999852211110 112234467888999999887774
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
+..+||||||||.-||..++++.+.++||||.++||...+.++++.|+++++..++|+|+ +.|+-..+..++|.|+-|
T Consensus 132 -yLd~LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~YsD~IVAl 209 (252)
T COG4604 132 -YLDELSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYSDHIVAL 209 (252)
T ss_pred -hHHhcccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhhhheeee
Confidence 456799999999999999999999999999999999999999999999999988888777 567889999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000913 399 SDGQIVYQGPRELVLE 414 (1226)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1226)
.+|+++.+|+++++.+
T Consensus 210 K~G~vv~~G~~~eii~ 225 (252)
T COG4604 210 KNGKVVKQGSPDEIIQ 225 (252)
T ss_pred cCCEEEecCCHHHhcC
Confidence 9999999999998863
No 494
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.6e-33 Score=317.35 Aligned_cols=206 Identities=25% Similarity=0.320 Sum_probs=168.8
Q ss_pred ceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCC--C
Q 000913 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1226)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d--~ 236 (1226)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 46999999999999999999999999999999999999987 9999999998765432 35799999986 3
Q ss_pred CCCCCCHHHHHHHHhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-ccccc
Q 000913 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1226)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1226)
+.+..|++|++.+..... ... ..+....++.+++.+|+. ...++
T Consensus 102 ~~~~~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 147 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLLSLD----------------------------------KAERLARASEMLRAVDLDDSVLDK 147 (268)
T ss_pred cCCCCCHHHHHHHHHHhhccCC----------------------------------HHHHHHHHHHHHHHcCCChhHhhC
Confidence 667899999997653210 000 001112456778899996 34444
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCc
Q 000913 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1226)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1226)
..+.||||||||++||++|+.+|++|||||||+|||..+...+.+.|+++.+.. +++||.++|+..++.+++|+
T Consensus 148 -----~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiiivsH~~~~i~~~~d~ 221 (268)
T PRK10419 148 -----RPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQF-GTACLFITHDLRLVERFCQR 221 (268)
T ss_pred -----CCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHc-CcEEEEEECCHHHHHHhCCE
Confidence 345699999999999999999999999999999999999999999999876533 45556678888899999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000913 395 IILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1226)
+++|++|++++.|+.+++.
T Consensus 222 i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 222 VMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEEECCEEeeeCChhhcc
Confidence 9999999999999988764
No 495
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.2e-33 Score=310.63 Aligned_cols=210 Identities=23% Similarity=0.274 Sum_probs=167.3
Q ss_pred eEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEc--Cc-
Q 000913 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS--GY- 932 (1226)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~--g~- 932 (1226)
++++|+++.++.... ...++.+|+|+|++|++||+++|+|+||||||||+++|+|... +..|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCc
Confidence 567888877742100 0012469999999999999999999999999999999999876 457999998 42
Q ss_pred -cCCh---hh----hcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCC
Q 000913 933 -PKKQ---ET----FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLP 1003 (1226)
Q Consensus 933 -~~~~---~~----~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~ 1003 (1226)
+... .. .++.++|++|++.+++.+||+|++.+..... ........+.+.++++.+++.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3211 11 2346899999998999999999998864322 12333445567889999999753 3443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEe
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~ 1082 (1226)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|+++.+.
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 4579999999999999999999999999999999999999999999999877999999999975 3667899998764
No 496
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=8.5e-34 Score=318.81 Aligned_cols=198 Identities=23% Similarity=0.233 Sum_probs=159.4
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1226)
.+|+|||+.|++||+++|+|||||||||||++|+|.++ . +|+|.++|.++..... ++.++||+|++.+++ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 38999999999999999999999999999999999997 5 8999999998765432 467999999988876 59
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCC-------ccccccc
Q 000913 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL-------DVCADTM 315 (1226)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~dt~ 315 (1226)
|+||+.+... ...+.. ...++.+|| +..+|+.
T Consensus 93 v~~nl~~~~~-----~~~~~~------------------------------------~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGK-----WSDEEI------------------------------------WKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccC-----CCHHHH------------------------------------HHHHHHcCCHHHHHhCcccccce
Confidence 9999963211 011111 112222333 3456677
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcE
Q 000913 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1226)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1226)
+++ ....||||||||++||||++.+|+|++|||||++||+.+...+.+.|++.. .+ ++||.++|+...+. .+|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~~-~tii~isH~~~~i~-~~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--AD-CTVILSEHRIEAML-ECQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--CC-CEEEEEECCHHHHH-hCCEE
Confidence 776 456799999999999999999999999999999999999999999999752 34 45566777776665 59999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000913 396 ILLSDGQIVYQGPRELVLE 414 (1226)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1226)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999864
No 497
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.1e-32 Score=344.45 Aligned_cols=213 Identities=24% Similarity=0.348 Sum_probs=178.0
Q ss_pred ceeEEeceeeEEeccchhhhcccccCceEEeecccccccCCeEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000913 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1226)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1226)
..++++||+|+++. .++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 329 ~~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~--~~~G~I~i~g~~ 395 (571)
T TIGR02203 329 GDVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYE--PDSGQILLDGHD 395 (571)
T ss_pred CeEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCeEEECCEe
Confidence 46999999999852 12358999999999999999999999999999999999876 568999999987
Q ss_pred CC---hhhhcceeeEeecCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000913 934 KK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1226)
Q Consensus 934 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1226)
++ ...+++.++||+|++.+++ -|++|||.++. +.+.+ ++.++++++.+++.+.. |+.+|..
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~ 466 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQAD----RAEIERALAAAYAQDFVDKLPLGLDTPIGEN 466 (571)
T ss_pred HHhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCCC----HHHHHHHHHHcChHHHHHhCcCcccceecCC
Confidence 54 3456778999999998775 59999998752 11223 23477888888886543 3445544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEec
Q 000913 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1226)
Q Consensus 1004 ~~~~LSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~p~~~i~~~~D~v~ll~~ 1083 (1226)
...||||||||++|||+|+++|+||+||||||+||+.+++.+++.|+++. +++|||++||+++ ..+.||++++|++
T Consensus 467 -g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~--~~~~~D~ii~l~~ 542 (571)
T TIGR02203 467 -GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLS--TIEKADRIVVMDD 542 (571)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999885 4799999999985 5788999999986
Q ss_pred CcEEEEeCCC
Q 000913 1084 GGQEIYVGPL 1093 (1226)
Q Consensus 1084 Gg~~~y~G~~ 1093 (1226)
|+++..|+.
T Consensus 543 -g~i~~~g~~ 551 (571)
T TIGR02203 543 -GRIVERGTH 551 (571)
T ss_pred -CEEEeeCCH
Confidence 788888863
No 498
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=315.39 Aligned_cols=210 Identities=21% Similarity=0.275 Sum_probs=163.8
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1226)
++|+|+|+++++|++++|+|+|||||||||++|+|.++++. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 48999999999999999999999999999999999987531 1389999999887431 1235799999998878
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000913 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1226)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1226)
+ +||+||+.++....+.... .+....++.+++.+|+....... -+
T Consensus 101 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~-~~ 145 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKLPQ---------------------------------ADLDEIVESALKGAALWQEVKDK-LN 145 (259)
T ss_pred C-ccHHHHHHHHHHHhcCCCH---------------------------------HHHHHHHHHHHHHcCCcchhhhH-hc
Confidence 7 8999999886543210000 00112244556777763211111 12
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHhhcCcEEEE
Q 000913 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1226)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1226)
..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+++|++++|
T Consensus 146 ~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~i~~~~d~i~~l 222 (259)
T PRK14260 146 KSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHNMQQATRVSDFTAFF 222 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 34567999999999999999999999999999999999999999999998742 3 45566788889999999999999
Q ss_pred c-----CCeEEEecChhHHH
Q 000913 399 S-----DGQIVYQGPRELVL 413 (1226)
Q Consensus 399 ~-----~G~iv~~G~~~~~~ 413 (1226)
+ +|+++++|+++++.
T Consensus 223 ~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 223 STDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred eccCCCCceEEEeCCHHHHh
Confidence 8 59999999998863
No 499
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2e-34 Score=356.39 Aligned_cols=227 Identities=25% Similarity=0.369 Sum_probs=171.4
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHhh--hcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHhHh
Q 000913 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRID--RVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1226)
.++.....+|+.++++.+++ ..+... ....+....+++|+||+|.++.
T Consensus 297 ~~~~~~~~~ri~~~l~~~~~-----~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~------------------------- 346 (529)
T TIGR02868 297 LTRVRAAAERIEEVTGAKGP-----RPEGVVPAAGALGLGKPTLELRDLSFGYPG------------------------- 346 (529)
T ss_pred HHHHHHHHHHHHHHhcCCCC-----cCCCCCCCCcccCCCCceEEEEEEEEecCC-------------------------
Confidence 56778888999888876554 111000 0001112357999999999832
Q ss_pred hhcCCCcccceEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEec
Q 000913 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1226)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~ 232 (1226)
+ .++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++. . ++.++||+
T Consensus 347 -----~---~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~---~G~I~i~g~~i~~~-~~~lr~~i~~V~ 414 (529)
T TIGR02868 347 -----S---PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPL---QGEVTLDGVSVSSL-QDELRRRISVFA 414 (529)
T ss_pred -----C---CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEhhhH-HHHHHhheEEEc
Confidence 1 13999999999999999999999999999999999999998 99999999998877 4 36899999
Q ss_pred CCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccc
Q 000913 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1226)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1226)
|++.+| +.||+|||.++.. ....+.+.++++... + ++. +..|++..
T Consensus 415 Q~~~lF-~~TI~eNI~~g~~----~~~~e~i~~al~~a~---l------------------------~~~--i~~lp~Gl 460 (529)
T TIGR02868 415 QDAHLF-DTTVRDNLRLGRP----DATDEELWAALERVG---L------------------------ADW--LRSLPDGL 460 (529)
T ss_pred cCcccc-cccHHHHHhccCC----CCCHHHHHHHHHHcC---C------------------------HHH--HHhCcccc
Confidence 977655 5699999998631 112222333222211 0 111 23478889
Q ss_pred cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEec
Q 000913 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQ 383 (1226)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q 383 (1226)
||.||+.+. .||||||||++||||++++|+||+||||||+||+.++..|.+.|++.. .++|+|++.|+
T Consensus 461 dT~ige~G~-~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~--~~~TvIiItHr 528 (529)
T TIGR02868 461 DTVLGEGGA-RLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL--SGKTVVVITHH 528 (529)
T ss_pred cchhccccC-cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCEEEEEecC
Confidence 999998765 599999999999999999999999999999999999999999998742 45666665443
No 500
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.6e-33 Score=313.64 Aligned_cols=206 Identities=25% Similarity=0.358 Sum_probs=164.5
Q ss_pred eEeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCcc-----CCCCCc-------cceEEEecC
Q 000913 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1226)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~nG~~-----~~~~~~-------~~~~~yv~Q 233 (1226)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 17 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~q 93 (253)
T TIGR02323 17 KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPD---HGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVHQ 93 (253)
T ss_pred eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEEecccccccccccCCHHHHHHhhhcceEEEEe
Confidence 3899999999999999999999999999999999999998 9999999976 543321 245899999
Q ss_pred CCC--CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-
Q 000913 234 HDN--HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1226)
Q Consensus 234 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1226)
++. ..+.+|+.||+.+....... .... +....++.+++.+|+..
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~--------------------------------~~~~~~~~~l~~l~l~~~ 140 (253)
T TIGR02323 94 NPRDGLRMRVSAGANIGERLMAIGA-RHYG--------------------------------NIRAAAHDWLEEVEIDPT 140 (253)
T ss_pred CcccccCccccHHHHHHHHHHHhcc-cchH--------------------------------HHHHHHHHHHHHcCCChh
Confidence 864 45667999999764311100 0000 01123567788999963
Q ss_pred cccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHccCCeEEEEEecChhhHHh
Q 000913 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1226)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 390 (1226)
..++. ++.|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++....+ .+||.++|+..++..
T Consensus 141 ~~~~~-----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~vsH~~~~~~~ 214 (253)
T TIGR02323 141 RIDDL-----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLG-LAVIIVTHDLGVARL 214 (253)
T ss_pred hhhcC-----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHH
Confidence 44544 456999999999999999999999999999999999999999999998765334 455557788889999
Q ss_pred hcCcEEEEcCCeEEEecChhHHH
Q 000913 391 LFDDIILLSDGQIVYQGPRELVL 413 (1226)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1226)
.+|++++|++|++++.|+.+++.
T Consensus 215 ~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 215 LAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred hcCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988764
Done!