Your job contains 1 sequence.
>000915
MESMLEEQTFQVDNTENDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITN
LCPLCQGEFQLITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYIDENAVIC
LDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV
PQNSSIDLTQSTNDQSGPENANGDHLAESLFPRKVSVSVADAGETAVVVSMIGEEPNENF
QSMLEIEKGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEPELSFSQDASFCLPSTSL
GSSEVKTDSADEKLNEQSSCGGVKSFLGKTFNEPYPGNKPSDCISNVDLHLGLSMSKSVA
DTNKYLTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNHDNCSGINKEIT
TKKVTEVPAKKIRAEKLTQTNPHKDEANASILANSKKFPTLIAGRRHEKSKLCPEKVDVT
SDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELR
KEIREAVRNRSSKDCDENLFDPKLLAAFRAAIAGPKCEPVKQPAHLAVKVKKSMLEKGKV
RESLTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATKTEKIGTLKSVLDLLRNNSQSSD
TEQSTECQETNPILSRLYLADTSVFPRKDNIMPLSALKATDNSEQSKEQAISMEKPLKLS
SDNCASKVAETNKVSSKVGVLSAYEKGTRNMSCSKSNAALSKVHPIQLGDPKVNSLKGTA
TSDDVKVDKRKWALEILARKTAVACKSATHEKPEDTAMLKRNYPLLARLPADMKPVLAPS
HHNKIPISVRQTQLYRLTEFFLRKANLPVIRRTAETELAVADAVNIEKEVADRSNSKLVY
LNLCSHEISCRSDNKKSTRATESNSSAPPAVPIDELERATDKLSTDHSVEEALRNAGLLS
DSPPNSPHHPTEVPSEVDISSMETGEGEPDNVFEMESHAEMDIYGDFEYDLEDEDFIGVS
AMKVSNLQPEEVSKVKVVFSTLNSEKLNNVVDNKVGGGLEKNEHKDSTCLLESHSDAVIR
SSTTEDGTSKPCIPLESLPCEEGEDLSLAECEELYGPDKEPLVSKFPEVSQKPCGLLDGE
AQAENKCAGEASDIGNEQHDEDISCGKEKLTDDVQTGDGTLRKESESSTSTEKRHDGVNL
VSRKVLFVQFVNATVLIYYFCFPMK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000915
(1225 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123431 - symbol:AT4G10930 species:3702 "Arabi... 758 1.3e-83 3
TAIR|locus:2123446 - symbol:AT4G10940 "AT4G10940" species... 616 4.5e-59 1
TAIR|locus:2078092 - symbol:AT3G05670 "AT3G05670" species... 176 3.1e-09 1
TAIR|locus:2098443 - symbol:AT3G28770 "AT3G28770" species... 139 8.2e-07 2
UNIPROTKB|E2RKG5 - symbol:SCAF11 "Uncharacterized protein... 113 7.2e-06 3
FB|FBgn0052251 - symbol:Claspin "Claspin" species:7227 "D... 123 1.1e-05 3
UNIPROTKB|E1BTQ2 - symbol:RNF8 "Uncharacterized protein" ... 103 1.6e-05 2
ZFIN|ZDB-GENE-030131-624 - symbol:phrf1 "PHD and ring fin... 96 1.9e-05 4
DICTYBASE|DDB_G0294609 - symbol:polD3 "DNA polymerase del... 137 3.5e-05 1
FB|FBgn0259108 - symbol:futsch "futsch" species:7227 "Dro... 145 5.2e-05 1
UNIPROTKB|F8W6K1 - symbol:SCAF11 "Protein SCAF11" species... 110 5.2e-05 1
FB|FBgn0037344 - symbol:CG2926 species:7227 "Drosophila m... 143 9.2e-05 4
DICTYBASE|DDB_G0281183 - symbol:DDB_G0281183 "RING zinc f... 135 0.00011 3
UNIPROTKB|F1NFF0 - symbol:Gga.41084 "Uncharacterized prot... 112 0.00027 3
UNIPROTKB|F1NGH5 - symbol:Gga.41084 "Uncharacterized prot... 112 0.00028 3
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 102 0.00037 1
TAIR|locus:2037294 - symbol:AT1G74990 species:3702 "Arabi... 102 0.00037 1
UNIPROTKB|E9PJ24 - symbol:PHRF1 "PHD and RING finger doma... 96 0.00039 4
UNIPROTKB|F8WEF5 - symbol:PHRF1 "PHD and RING finger doma... 96 0.00039 4
UNIPROTKB|Q9P1Y6 - symbol:PHRF1 "PHD and RING finger doma... 96 0.00039 4
RGD|1598325 - symbol:Scaf11 "SR-related CTD-associated fa... 114 0.00056 2
RGD|2319802 - symbol:LOC100365068 "rCG50794-like" species... 114 0.00057 2
ZFIN|ZDB-GENE-041210-22 - symbol:scaf11 "SR-related CTD-a... 121 0.00073 3
POMBASE|SPCC162.08c - symbol:nup211 "nucleoporin nup211" ... 129 0.00082 1
>TAIR|locus:2123431 [details] [associations]
symbol:AT4G10930 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161518 EMBL:AF080118
EMBL:AL049525 PIR:T01884 EMBL:AY133683 IPI:IPI00543344
RefSeq:NP_567370.1 UniGene:At.33598 IntAct:Q8L7I1 STRING:Q8L7I1
PaxDb:Q8L7I1 PRIDE:Q8L7I1 EnsemblPlants:AT4G10930.1 GeneID:826692
KEGG:ath:AT4G10930 TAIR:At4g10930 eggNOG:NOG314269
HOGENOM:HOG000155314 InParanoid:Q8L7I1 OMA:KVRENLT PhylomeDB:Q8L7I1
ProtClustDB:CLSN2917529 Genevestigator:Q8L7I1 Uniprot:Q8L7I1
Length = 984
Score = 758 (271.9 bits), Expect = 1.3e-83, Sum P(3) = 1.3e-83
Identities = 201/452 (44%), Positives = 269/452 (59%)
Query: 682 TSVFPRKDNIMPLSALKATDNSEQSKEQAIS-MEKPLKLSSDNCASKVAETNKVSSKVGV 740
+S P+ N + LS L D S + + + P ++ + K E +K K+
Sbjct: 395 SSETPQASNPI-LSRLYLADTSVFPRNDNLKPLLAPKEMGNSQNNGKPTEASKTLPKI-- 451
Query: 741 LSAYEKGTRNMSCSKSNAALSKVHPIQLGDPKVNSLKGTATSDDVKVDKRKWALEILARK 800
SA + + + SK N+ +K Q NS + DD+K DKRKWAL++LARK
Sbjct: 452 -SAAKGSSVKAAGSKLNSG-NKQSDGQPNLTSSNSKEMVENPDDLKKDKRKWALQVLARK 509
Query: 801 TAVACKSATHEKPEDTAMLKRNYPLLARLPADMKPVLAPSHHNKIPISVRQTQLYRLTEF 860
A+A ++T +K E + LK NYPLLA+LPADM+P LA S HNK+P++VRQTQLYRLTE
Sbjct: 510 KALAGNNSTQDK-EGSPELKGNYPLLAQLPADMRPSLATSRHNKVPVAVRQTQLYRLTEH 568
Query: 861 FLRKANLPVIRRTAETELAVADAVNIEKEVADRSNSKLVYLNLCSHEISCRSDNKKSTRA 920
L+K NL IRR+A TELAVADA+NIEK +AD+S+SK+VYLNLCS EI S++K A
Sbjct: 569 LLKKENLLTIRRSAATELAVADAINIEKAIADKSSSKVVYLNLCSQEILHHSESKTMDNA 628
Query: 921 TESNSSAPPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPPNSPHHPTEV-PSEVDI 979
E NSS+P A E ER + K S + +V EALR AGL +DSPPNSP EV P + D
Sbjct: 629 VEPNSSSPMAD--SESERISSKDSDNPAVLEALRAAGL-ADSPPNSPTRSVEVLPEKGDS 685
Query: 980 SSMETGEGEPDNVFEMESHAEMDIYGDFEYDLEDEDFIGVS-AMKVSNLQPEE-VSKVKV 1037
S +T E P NVF+M+S + DI+GDFEY+L++ED+ G + A K S +QP+E ++KVKV
Sbjct: 686 SLDKTRETGPYNVFDMDSVPDTDIFGDFEYELDEEDYFGATMAKKASVMQPDESLTKVKV 745
Query: 1038 VFSTLNSEK-LN--NVVDNKVGGGLEKNEHKDSTCLLESHSDAVIRSSTTE-DGTSKPCI 1093
V ST+ K LN VV+++ NE + E V E +G +
Sbjct: 746 VLSTVQPGKSLNPSEVVEDEETTTENLNETTNGK---EDGKSFVPMELVPEAEGEGEGEG 802
Query: 1094 PLESLPCEEGEDLSLAECEELYGPDKEPLVSK 1125
E GE LS+AECEELYGP E LV +
Sbjct: 803 EGEGEGEGGGEILSVAECEELYGPGTEKLVER 834
Score = 679 (244.1 bits), Expect = 7.8e-68, Sum P(3) = 7.8e-68
Identities = 155/293 (52%), Positives = 197/293 (67%)
Query: 467 HEKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMKRP 526
H +S+ P + T DI SIVKGT + K L N D+SS + EN +GLRVKKI + P
Sbjct: 202 HHESR-SPSN-NTTVDIFSIVKGTGRR--KNLMRSNPTDKSS-EAENAAGLRVKKIKRTP 256
Query: 527 AEDKDSSELVQELRKEIREAVRNRSSKDCDENLFDPKLLAAFRAAIAGPKC-EPVKQPAH 585
++K+S LV++LRKEIREAVRN+S +D EN FDPKLLAAFRAA+AGPK E ++ +
Sbjct: 257 EDEKESMVLVEKLRKEIREAVRNKSMEDIRENQFDPKLLAAFRAAVAGPKTGEAPRRSSA 316
Query: 586 LAVKVKKSMLEKGKVRESLTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATKTEKIGTL 645
LAVK KK ML+KGKVRE+LTKKIY + NG+R+ AW+RDCEVEFWK+RC++ K EKI TL
Sbjct: 317 LAVKAKKLMLQKGKVRENLTKKIYADLNGKRKSAWHRDCEVEFWKHRCIQGRKPEKIETL 376
Query: 646 KSVLDLLRNNSQSSDTEQSTEC-QETNPILSRLYLADTSVFPRKDNIMPLSALKATDNSE 704
KSVL LL+N + T S+E Q +NPILSRLYLADTSVFPR DN+ PL A K NS+
Sbjct: 377 KSVLSLLKNKPADTKTNFSSETPQASNPILSRLYLADTSVFPRNDNLKPLLAPKEMGNSQ 436
Query: 705 QS-KEQAISMEKPLKLSSDNCASKVAETNKVSSKVGVLSAYEKGTRNMSCSKS 756
+ K S P K+S A+K + SK+ + G N++ S S
Sbjct: 437 NNGKPTEASKTLP-KIS----AAKGSSVKAAGSKLNSGNKQSDGQPNLTSSNS 484
Score = 78 (32.5 bits), Expect = 1.3e-83, Sum P(3) = 1.3e-83
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 179 EVPQNSSIDLTQSTNDQSGPENANGDHLAESLFPRKVSVSVADAGETAVVVSMI-GEE 235
E ++S+ T+ + D S E N E+++ SV+VAD GETA+VVS++ G+E
Sbjct: 2 ETQPDTSLMETRKSLDIS--EKTNSGCSVEAVYSGNFSVTVADDGETALVVSIVKGDE 57
Score = 55 (24.4 bits), Expect = 1.3e-83, Sum P(3) = 1.3e-83
Identities = 33/142 (23%), Positives = 60/142 (42%)
Query: 400 SQIIGGKRNHDNCSGINKEITTKKVTEVPAKKIRAEKLTQ-TNPHKDEANASILANSKKF 458
+ +I KR H +CSG + TK +++ E+ + T H + + S F
Sbjct: 158 ASVISLKRKHSDCSGDDGNSETKPEIYESLNELKLEEEEELTTVHHESRSPSNNTTVDIF 217
Query: 459 PTLIAGRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLR 518
+++ G K+ + D +S+ + G + K K R+ +D E S +
Sbjct: 218 -SIVKGTGRRKNLMRSNPTDKSSEAENAA-GLRVKKIK---------RTPED-EKESMVL 265
Query: 519 VKKIMK--RPAEDKDSSELVQE 538
V+K+ K R A S E ++E
Sbjct: 266 VEKLRKEIREAVRNKSMEDIRE 287
Score = 40 (19.1 bits), Expect = 7.8e-68, Sum P(3) = 7.8e-68
Identities = 27/103 (26%), Positives = 43/103 (41%)
Query: 1072 ESHSDAVIRSSTTEDGTSKPCIPLESLPCEEG--EDLSLAECEELYGPDKEPLVSKFPEV 1129
ES + + ST + G K P E + EE E+L+ + G P+ PE
Sbjct: 738 ESLTKVKVVLSTVQPG--KSLNPSEVVEDEETTTENLNETTNGKEDGKSFVPM-ELVPEA 794
Query: 1130 SQKPCGLLDGEAQAENKCAGEASDIGNEQHDEDISCGKEKLTD 1172
+ G +GE + E + GE + + +E G EKL +
Sbjct: 795 EGEGEG--EGEGEGEGEGGGEILSVA--ECEELYGPGTEKLVE 833
>TAIR|locus:2123446 [details] [associations]
symbol:AT4G10940 "AT4G10940" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 Prosite:PS00518 EMBL:CP002687 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
IPI:IPI00519012 RefSeq:NP_567371.1 UniGene:At.54267
ProteinModelPortal:F4JN66 SMR:F4JN66 EnsemblPlants:AT4G10940.1
GeneID:826693 KEGG:ath:AT4G10940 OMA:DEDCCIE Uniprot:F4JN66
Length = 192
Score = 616 (221.9 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 110/178 (61%), Positives = 135/178 (75%)
Query: 3 SMLEEQTFQVDNTENDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLC 62
+++E++ +V++ N + E RCGICMD++IDRGVLDCCQHWFCF CIDNWSTI NLC
Sbjct: 9 NLVEDEAVEVEH--NGMTEIEGERCGICMDIIIDRGVLDCCQHWFCFECIDNWSTIMNLC 66
Query: 63 PLCQGEFQLITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYID------EN 116
PLCQ EFQLITCVPV+D+ S+ +D D +S ED IEE+++ +S PS+YID EN
Sbjct: 67 PLCQREFQLITCVPVFDSGESSKVDEDLVSGDEDCCIEEETDVVSSPSHYIDDTHYIDEN 126
Query: 117 AVICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCP 174
AV+CLDGD CKIR+ E SNLDTSIACDSCD+WYHA CVGFD E EDTW+CP
Sbjct: 127 AVVCLDGDLCKIRNTFSYIEGDSNLDTSIACDSCDMWYHAICVGFDVENASEDTWVCP 184
>TAIR|locus:2078092 [details] [associations]
symbol:AT3G05670 "AT3G05670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AC011620 HSSP:Q14839
eggNOG:NOG300312 EMBL:AY120751 EMBL:BT002568 IPI:IPI00528739
RefSeq:NP_187218.1 UniGene:At.18633 ProteinModelPortal:Q9M9X2
SMR:Q9M9X2 EnsemblPlants:AT3G05670.1 GeneID:819734
KEGG:ath:AT3G05670 TAIR:At3g05670 HOGENOM:HOG000093083
InParanoid:Q9M9X2 OMA:CKQRFRT ProtClustDB:CLSN2684496
Genevestigator:Q9M9X2 Uniprot:Q9M9X2
Length = 883
Score = 176 (67.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 52/168 (30%), Positives = 74/168 (44%)
Query: 11 QVDNTENDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70
+V+ + D++ CG C D+ +G LDCC H+FCF CI WS + + CPLC+ F+
Sbjct: 400 KVELVKRDVIKNVCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFR 459
Query: 71 LITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYID--ENAVICLDGDGCKI 128
I+ P T G + + D + L Y+D EN +IC + C
Sbjct: 460 TIS-KPARSTPGVDLREVVIPVPERDQVYQPTEEELRS---YLDPYEN-IICTE---C-- 509
Query: 129 RSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRC 176
G + L + CD CD H +CVG E E W C C
Sbjct: 510 HQG-----DDDGL--MLLCDLCDSSAHTYCVGLGRE-VPEGNWYCEGC 549
>TAIR|locus:2098443 [details] [associations]
symbol:AT3G28770 "AT3G28770" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
EMBL:CP002686 GenomeReviews:BA000014_GR HSSP:P01096 eggNOG:NOG12793
EMBL:AP002057 InterPro:IPR009605 Pfam:PF06746 IPI:IPI00529324
RefSeq:NP_189519.1 UniGene:At.42736 ProteinModelPortal:Q9LH98
PaxDb:Q9LH98 PRIDE:Q9LH98 EnsemblPlants:AT3G28770.1 GeneID:822509
KEGG:ath:AT3G28770 TAIR:At3g28770 OMA:SKNEILM
ProtClustDB:CLSN2912834 Genevestigator:Q9LH98 Uniprot:Q9LH98
Length = 2081
Score = 139 (54.0 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 159/795 (20%), Positives = 292/795 (36%)
Query: 233 GEEPNENFQSMLEIEKGVGNEAFNPYGG-DRNA--KSESNERTDIQSMLQAQEPELSFSQ 289
GE+ E+ + + + E N GG D N K +S + D +S+ E S +
Sbjct: 821 GEDNKEDKEESKDYQSVEAKEK-NENGGVDTNVGNKEDSKDLKDDRSVEVKANKEESMKK 879
Query: 290 DASFCLPSTSLGSSEVKTDSADEKLNEQSSCGGVKSFLGKTFNEPYPGNKPS--DCISNV 347
+ + EV+ + + ++ Q G +S K +E GNK D I+
Sbjct: 880 KREEVQRNDKSSTKEVRDFANNMDIDVQKGSG--ESVKYKK-DEKKEGNKEENKDTINTS 936
Query: 348 DLHLGLSMSKSVADT---NKYLTEDQITGYVQQQ-NPSEESLHEADKIEPGA-KEENSQI 402
G K ++ N E+ YV + E++ E K E KEEN
Sbjct: 937 SKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDN 996
Query: 403 IGGKRNHDNCSGIN--KEITTKKV-TEVPAKKIRAEKLTQTNPHKDEANASILANSKKFP 459
K + D+ S KE KK T+ AKK + + + KD ++
Sbjct: 997 KEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESR 1056
Query: 460 TLIAGRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRV 519
L A ++ E++K EK + + + S K K + + K D+ K + S R
Sbjct: 1057 DLKAKKKEEETK---EKKE-SENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRK 1112
Query: 520 KKIMKRPAEDKDSSELVQELRKEIREAVRNRSSKDCDENLF----DPKLLAAFRAAIAGP 575
K+ EDK E +++ ++ +N K L D K
Sbjct: 1113 KE------EDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETK 1166
Query: 576 KCEPVK-QPAHLAVKVKKSMLEKGK-----VRESLTKKIYGNSNGRRRRAWNRDCEVEFW 629
+ E K Q + K KKS ++ K ++ES KK+ N R+++ + + +
Sbjct: 1167 EIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKE 1226
Query: 630 KYRCMKATKTEKIGTLKSVLDLLRN-NSQSSDTEQSTECQETNPILSRLYLADTSVFPRK 688
+ K +K T K + S+S + E + Q T S + + +
Sbjct: 1227 TKKEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDE--SKNEILMQA 1284
Query: 689 DNIMPLSALKATDNSEQSKEQAISMEKPLKLSSDNCASKVAETNKVSSKVGVLSAYEKGT 748
D+ + D+ E E + + +N + +T+ +K + EK
Sbjct: 1285 DSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNK 1344
Query: 749 -RNMSCSKSNAALSKVHPIQLGDPKV-NSLKGTATSDDVKVDKRKWALEILARKTAVACK 806
++ + + + K ++ + N K AT+ + D + EIL + + A
Sbjct: 1345 PKDDKKNTTKQSGGKKESMESESKEAENQQKSQATT---QADSDESKNEILMQADSQADS 1401
Query: 807 SATHEKPEDTAMLKRNYPLLARLPADMKPVLAPSHHN--KIPISVRQTQLYRLTEFFLRK 864
+ + D + +N L+ AD + ++ K SV + + + T+ +
Sbjct: 1402 HSDSQADSDES---KNEILMQ---ADSQATTQRNNEEDRKKQTSVAENKKQKETK---EE 1452
Query: 865 ANLPVIRRTAETELAVADAVNIEKEVADRSNSKLVYLNL------CSHEISCRSDNKKST 918
N P + TE + ++E E + N + +EI ++D++ T
Sbjct: 1453 KNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADT 1512
Query: 919 RATESNSS--APPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPPNSPHHPTEVPSE 976
A S + + + +A + +D S E L A +DS +S E+ +
Sbjct: 1513 HANSQGDSDESKNEILMQADSQADSQTDSDESKNEILMQADSQADSQTDSDESKNEILMQ 1572
Query: 977 VDISSMETGEGEPDN 991
D S + GE DN
Sbjct: 1573 AD-SQAKIGESLEDN 1586
Score = 75 (31.5 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 55/269 (20%), Positives = 112/269 (41%)
Query: 907 EISCRSDNKKSTRATESNSSAPPAVPIDELERATDKLS--TDHSVEEALRNAGLLSDSPP 964
E+S +K S E N ++ + T +++ + S EE ++ G + +
Sbjct: 1627 EVSTEEGSKDSN-IVERNGGKEDSIKEGSEDGKTVEINGGEELSTEEGSKD-GKIEEGKE 1684
Query: 965 NSPHHPTEVPSEVDISSMETG-EGEPDNVFEMESHAEM-DIYGDFEYDLEDEDFIGV--S 1020
+ T+ S+ D +E G EG+ ++ E ++ +I+GD E +E+ G S
Sbjct: 1685 GK-ENSTKEGSKDD--KIEEGMEGKENSTKESSKDGKINEIHGDKEATMEEGSKDGGTNS 1741
Query: 1021 AMKVS-NLQPEEVSKVKVVFSTLNSEKLNNVVDNKVGGGLEKNEHKDSTCLLESHSDAVI 1079
K S + + E++ VK +L + N + N++ G E + KD+ ++ + +++
Sbjct: 1742 TGKDSKDSKSVEINGVKD--DSLKDDSKNGDI-NEINNGKEDSV-KDNVTEIQGNDNSLT 1797
Query: 1080 RSSTTEDGTSKPCIPLESLPCEEGEDLSLAECEELYGPDKEPLVSKFPEVSQKPCGLLDG 1139
S+++E K +S+ E + + G +E S +Q +
Sbjct: 1798 NSTSSEPNGDKLDTNKDSMKNNTMEAQGGSNGDSTNGETEETKESNVSMNNQNMQDVGSN 1857
Query: 1140 EAQAENKCAGEASDIGNEQHDEDISCGKE 1168
E N+ G DI + D + + KE
Sbjct: 1858 ENSMNNQTTGTGDDIISTTTDTESNTSKE 1886
>UNIPROTKB|E2RKG5 [details] [associations]
symbol:SCAF11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0000245
"spliceosomal complex assembly" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0000245 GeneTree:ENSGT00530000063661
CTD:9169 OMA:ECDSFCS EMBL:AAEX03015115 EMBL:AAEX03015114
RefSeq:XP_534828.3 Ensembl:ENSCAFT00000014798 GeneID:477634
KEGG:cfa:477634 NextBio:20853078 Uniprot:E2RKG5
Length = 1459
Score = 113 (44.8 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 13 DNTEND-LLNFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEF 69
DNT LL E RC IC++ ++++ G + C H FC CI W+ I CP+ + F
Sbjct: 26 DNTATTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAEILASCPVDRKPF 85
Query: 70 QLI 72
Q +
Sbjct: 86 QAV 88
Score = 86 (35.3 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 97/533 (18%), Positives = 191/533 (35%)
Query: 470 SKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSAD--RSSKDRENVSGLRVKKIMKRPA 527
S + P + TS I GT CK LAH + + + N G R K P
Sbjct: 259 SPVLPRTIFPTSTISLENLGTSCK-GYALAHTQEGEEKKQTSGTSNTRGTRRKPAATTPT 317
Query: 528 EDKDSSELVQELRKEIREAVRNRSSKDCDEN----LFDPKLLAAFRAAIAGPKCEPVKQ- 582
+ + + R V N S D +N + P A+ + PK + V++
Sbjct: 318 RRSTRNVRAEAAGQSQRSPVSNNSGCDAPDNSSPSVSIPSSAASEKQTRQAPKRKSVRRG 377
Query: 583 --PAHLAVKVKKSML--EKGKVRESLTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATK 638
P L K++ S+ EK +S+ ++ S+ +VE C
Sbjct: 378 RKPPLLKKKLRSSIPAPEKSSSSDSVDEET-AESDTPPVIEKEHQSDVESGN-SCTVQAS 435
Query: 639 TEKIGTLKSVLDLLRN-NSQSSDTEQSTECQETNPILSRLYLADTSVFPRKDNIMPLSAL 697
E + D L++ N Q ++E+ TE + + Y + P +
Sbjct: 436 VENVSA-----DNLKSCNEQVEESEEHTENHDPEEAVESSYSESHTQDPPELVEEEEETQ 490
Query: 698 KATDNSEQSKEQAISMEKPLKLSS---DNCASKVAETNKVSSKVGVLSAYEKGTRN-MSC 753
K + S ++ + E P +S D ++ + S+V + + + ++C
Sbjct: 491 KVENTSIEANVLCLVSETPEDISGKGGDLLENQDQTSGPSESEVKADKCTDDHSNDFLTC 550
Query: 754 SKSNAALSKVHPIQLGDPKVNSLKGTATSDDVKVDKRKWALEILARKTAVACKSATHEKP 813
S S L + P LG+ N++ + ++ KV + +E++ K ++ + P
Sbjct: 551 SGSEIELHEPVP-SLGEFPENAV---SVVNEEKVMENP-VVEVIDHKDSIVKTEQLVDSP 605
Query: 814 EDTAMLKRNYPLLARLPADMKPVLAPSHHNKIPISVRQTQLYRLTEFF--LRKANLPVIR 871
+ + + + + V H + + E F ++ + +++
Sbjct: 606 TLESSESKIIQTVDKKSIESSEVQLLGHVETEDVEITTACDTSENENFNSMQDSRSNLLQ 665
Query: 872 RTAETELAVADAVNIEKEVADRSNSKLVYLNLCSHEISCRSDNKKST-RATESNSSAPPA 930
T+L E +++L + ++ + DN + +S S
Sbjct: 666 NNLNTKLDKCSGEKTESPNEHSRSAELPHTHIEQIQKHFSEDNNEMIPMECDSFCSDQNE 725
Query: 931 VPIDELERATDKLSTDHSVEEALRNAGLLSDSPPNSPHHPTEVPSEVDISSME 983
I+ A K ++SVE++ +N +LS P N PSE + +E
Sbjct: 726 SEIEPSVNADTKQLNENSVEQSSQN-NMLSSDPANEKVETASQPSESPVDVIE 777
Score = 81 (33.6 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 63/292 (21%), Positives = 115/292 (39%)
Query: 885 NIEKEVADRSNSKLVYLNLCSHEISCRSDNKKSTRATESNSSAPPAVPIDELERATDKLS 944
++++E A+ ++ H+ S N + +A+ N SA +E +++ +
Sbjct: 402 SVDEETAESDTPPVIEKE---HQSDVESGNSCTVQASVENVSADNLKSCNEQVEESEEHT 458
Query: 945 TDHSVEEALRNAGLLSDSPPNSPHHPTEVPSEVDISSMETGEGEPDNVFEMESHAEMDIY 1004
+H EEA+ ++ S+S P P V E + +E E NV + S DI
Sbjct: 459 ENHDPEEAVESS--YSESHTQDP--PELVEEEEETQKVENTSIEA-NVLCLVSETPEDIS 513
Query: 1005 GDFEYDLEDEDFI-GVSAMKV-SNLQPEEVSKVKVVFSTLNSE------KLNNVVDNKVG 1056
G LE++D G S +V ++ ++ S + S E L +N V
Sbjct: 514 GKGGDLLENQDQTSGPSESEVKADKCTDDHSNDFLTCSGSEIELHEPVPSLGEFPENAVS 573
Query: 1057 GGLEKNEHKDSTCLLESHSDAVIR------SSTTEDGTSK--PCIPLESLPCEEGEDLSL 1108
E+ ++ + H D++++ S T E SK + +S+ E + L
Sbjct: 574 VVNEEKVMENPVVEVIDHKDSIVKTEQLVDSPTLESSESKIIQTVDKKSIESSEVQLLGH 633
Query: 1109 AECE--ELYGPDKEPLVSKFPEVSQKPCGLLDGEAQAE-NKCAGEASDIGNE 1157
E E E+ F + LL + +KC+GE ++ NE
Sbjct: 634 VETEDVEITTACDTSENENFNSMQDSRSNLLQNNLNTKLDKCSGEKTESPNE 685
Score = 69 (29.3 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 72/319 (22%), Positives = 124/319 (38%)
Query: 807 SATHEKPEDTAMLKRNYPLLARLPADMKPVLAPSHHNKIPISVRQTQLYRLTEFFLRKAN 866
SA EK A KR R P P+L + IP + + + E
Sbjct: 358 SAASEKQTRQAP-KRKSVRRGRKP----PLLKKKLRSSIPAPEKSSSSDSVDEETAESDT 412
Query: 867 LPVIRRTAETELAVADAVNIEKEVADRSNSKLVYLNLCSHEISCRSDNKKSTRATESNSS 926
PVI + ++++ ++ ++ V + S L N E ++N A ES+ S
Sbjct: 413 PPVIEKEHQSDVESGNSCTVQASVENVSADNLKSCNEQVEESEEHTENHDPEEAVESSYS 472
Query: 927 A-----PPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPPNSPHHPTEVPSEVDISS 981
PP + ++E E T K+ S+E + L+S++P DIS
Sbjct: 473 ESHTQDPPEL-VEE-EEETQKVENT-SIEANV--LCLVSETPE-------------DISG 514
Query: 982 METGEGEPDNVFEMESHAEMDIYGDFEYDLEDEDFIGVSAMKVSNLQP-EEVSKV-KVVF 1039
G +N + +E ++ D D DF+ S ++ +P + + +
Sbjct: 515 K--GGDLLENQDQTSGPSESEVKADKCTDDHSNDFLTCSGSEIELHEPVPSLGEFPENAV 572
Query: 1040 STLNSEK-LNN----VVDNKVGGGLEKNEHKDSTCLLESHSDAVIRSSTTEDGTSKPCIP 1094
S +N EK + N V+D+K + K E + LES +I+ T D S
Sbjct: 573 SVVNEEKVMENPVVEVIDHK--DSIVKTEQLVDSPTLESSESKIIQ---TVDKKSIESSE 627
Query: 1095 LESLPCEEGEDLSLAE-CE 1112
++ L E ED+ + C+
Sbjct: 628 VQLLGHVETEDVEITTACD 646
Score = 52 (23.4 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 34/130 (26%), Positives = 52/130 (40%)
Query: 284 ELSFSQDASFCLPSTSLGSSEVKTDSADEKLNE---------QSSCGGVKSFLGKTFNEP 334
E SF + S C S S +VK D KLN+ S G K+ K N+P
Sbjct: 114 ESSFKKQLSCCENSKSYMRKKVKEDLLSAKLNDLKMTHRNSSHSEMEGKKNGTLK-INKP 172
Query: 335 YPGNK-PSDCISNVDLHLGLSMSKSVADTN----KYLTE----DQITGYVQQQNPSEESL 385
N+ S C N ++ S S +++ Y TE +++ ++Q+ E L
Sbjct: 173 QRANQCTSQCFRNFFSNM-FSSSNHTGESSFTCRTYCTELGEVSEMSALIRQKR-QELEL 230
Query: 386 HEADKIEPGA 395
+ PGA
Sbjct: 231 SWFPHMSPGA 240
>FB|FBgn0052251 [details] [associations]
symbol:Claspin "Claspin" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IMP] GO:GO:0005634 EMBL:AE014296
GO:GO:0033314 EMBL:AY113649 RefSeq:NP_728981.1 UniGene:Dm.21144
ProteinModelPortal:Q8IRB5 STRING:Q8IRB5 PaxDb:Q8IRB5 PRIDE:Q8IRB5
EnsemblMetazoa:FBtr0073286 GeneID:326205 KEGG:dme:Dmel_CG32251
UCSC:CG32251-RA FlyBase:FBgn0052251 eggNOG:NOG331243
GeneTree:ENSGT00390000012738 InParanoid:Q8MYR6 OMA:QRQFRWK
OrthoDB:EOG47M0DC PhylomeDB:Q8IRB5 GenomeRNAi:326205 NextBio:847618
Bgee:Q8IRB5 InterPro:IPR024148 InterPro:IPR024146 PANTHER:PTHR14396
PANTHER:PTHR14396:SF5 Uniprot:Q8IRB5
Length = 1465
Score = 123 (48.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 129/582 (22%), Positives = 239/582 (41%)
Query: 378 QNPSEESLHEADKIEPGAKEENSQIIGGKR--NHDNCSGINKEITTKKVTEVPAKKIRAE 435
+N ++ + E D+ P +++ +++ K+ N D N+E + E PAK +++
Sbjct: 163 KNKTQANKAEDDQDNPSKEDKPKKVVKNKKQTNKDGKPQTNEEYDHHQQHEKPAKTQKSK 222
Query: 436 KLTQTNPHK-DEANASILANSKKFPTLIA-GRRHEKSK---LCPEKVDVTSDIMSIVKGT 490
KL + + D+ + KK P+ + ++ +KSK L + D D+ +
Sbjct: 223 KLAKKQKQQEDDKEDNGTEQEKKKPSPKSKAKKSDKSKIDSLMDNEEDAGEDLKMYQEDQ 282
Query: 491 KCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIREAVRNR 550
+ P+ K SA +++KD + SG ED++ E + L+K I+ + N
Sbjct: 283 E---PQKQKTKKSAKKTNKDSKEESG-----------EDQEHQEQKKPLKK-IK--LDNI 325
Query: 551 SSKDCDENLFDPKLLAAF--RAAIAGPKCEP-----VKQPAHLAVKVKKSMLEKGKVRES 603
+K+ E + PK +A + ++ + E V Q L ++ LE G +E
Sbjct: 326 DTKEDKEQIVKPKKMAKKNKQKVLSDDESEENQNEKVDQDHDLKKMSSENELEMGSDKED 385
Query: 604 LTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATKTEKIGTLKSVLDLLRNNSQSSDTEQ 663
+ + ++ + + E E K K T + K LK ++D S++E
Sbjct: 386 QEMQEPPKKAKKNKQRMDSESEDEIPKTESEKITSSPK-NKLKGLVD--------SESEP 436
Query: 664 STECQETNPILSRLY-LADTSVFPRKDNIMPLSALKATDNSEQSKEQAISMEKPLKLSSD 722
+E +P+ ++L L D+ P DN P ++ E E A+S EKP K
Sbjct: 437 EETAEEVSPVKNKLKGLVDSESEPELDN--PE---ESAGEQEAPMESALSREKPKKAKVV 491
Query: 723 NCASKVA---------ETNKVSSKVGVLSAYEKGTRN-----MSCSKSNA----ALSKVH 764
++K A E ++ + + Y + +S NA AL+
Sbjct: 492 RESAKKALEGMQAIQSEQQRLHREAHINVPYHQPKPRTLKEFLSRRTINAPLATALAGGS 551
Query: 765 PIQLGDPKVNSLKGTATSDDVKVDKRKWALEILARKTAVACKSATHEKPEDTAMLKRNYP 824
P+ P+ S+ T ++++ + +E A++ KS + ED + + P
Sbjct: 552 PMPSRQPR-KSVGLRMTREELEAYAK--LMEDRAKEATEFFKSESESDEEDDS--ENEEP 606
Query: 825 L-LARLPADMKPVLAPSHHNKIPISVRQTQLYRLTEFFLRKA--NLPVIR--RTAET--- 876
+ L P M +L + K P + TE +A +PV+ +T +T
Sbjct: 607 MELKDNPGVMDEML---DNPKTPEQPKND-----TEDMTSQAVIEVPVLGEDKTDDTVGD 658
Query: 877 ELAVADAVNIEKEVADRSNSKLVYLNLCSH-EISCRSDNKKS 917
E VAD++ E+ +A S S L L + EI + N KS
Sbjct: 659 EAMVADSITEEEPIA--STSTAAALKLADNFEIQ-QETNAKS 697
Score = 82 (33.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 60/237 (25%), Positives = 99/237 (41%)
Query: 931 VPIDELERATDKL-STDHSVEEALRNAGLLSDSPPNSPHHPTEVPSEVDISSMETGEGEP 989
V I+E E DK+ ST +A N + P ++P +E + D S + E P
Sbjct: 884 VTINEDEEIIDKVDSTAEDDGDAEENKNDADEDPEDNPVEDSE-DEKNDSESEQECEANP 942
Query: 990 DNVFEMESHAEMDIYGDFEYDLEDEDFIGV-SAMKVSNLQPEEVSKVKVVFSTLNSEKLN 1048
+ E ++ + I FE D DED + + K SN+ P ++++ L++ KL
Sbjct: 943 EP--ETQTRKKNRIIKAFEDDNSDEDDLDLLQTPKPSNVAPITATQLQ-----LSAHKLF 995
Query: 1049 NVVDNKVGGGLEKNEHKDSTCLLESHSDAVIRSSTTEDGTSKPCIPLESLPCEEGEDLSL 1108
+V + E+NE D C + ++ S D S + +P + S
Sbjct: 996 DVETRRTASD-EENELLD-LCSGQFPQTQMLSS----DAPSVDTAVISQIPMTQFGGSSQ 1049
Query: 1109 AECEELYGPDKEPLVSKFPEVSQKPCGLLDGEAQAENKC-AGEASDI--GNEQHDED 1162
A +EL G ++ P SQ P E Q E++ A A+ I +E+ ED
Sbjct: 1050 A-ADELEGLCSGTFATQLP--SQAPTQ--QPEQQEESEVPAAVANRIVSSDEEAQED 1101
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 868 PVIRRTAETELAVADAVNIEKEVADRSNSKLVYLNLCSHEISCRSDNKKSTRATESNSSA 927
P+ + L +AD I++E +S SK+ L + + + + T S+ A
Sbjct: 671 PIASTSTAAALKLADNFEIQQETNAKSPSKVC---LVTEVVELPKLDLSTINITPSSKPA 727
Query: 928 PPAVPIDELERATDKLSTDHSVEEA 952
P I E+ R +L + S++E+
Sbjct: 728 TPK--ISEVIR---QLKIEKSLDES 747
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 17 NDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCVP 76
ND+L E +C IC + I+ L+C H FC CID W+ CP+C+ E + T
Sbjct: 2 NDVLENEL-QCTICSEHFIEAVTLNCA-HSFCSYCIDEWTKRKVECPICRQEIKSKTRSL 59
Query: 77 VYD 79
V D
Sbjct: 60 VLD 62
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 681 DTSVFPRKDNIMPLSALKATDNSE 704
D+S+ P +I+ +S+ + D+ E
Sbjct: 102 DSSIIPSIYSILSISSCDSEDSEE 125
>ZFIN|ZDB-GENE-030131-624 [details] [associations]
symbol:phrf1 "PHD and ring finger domains 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518
ZFIN:ZDB-GENE-030131-624 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 GeneTree:ENSGT00530000063661 EMBL:AL928892
Ensembl:ENSDART00000150719 Bgee:H0WEE0 Uniprot:H0WEE0
Length = 1670
Score = 96 (38.9 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 36/137 (26%), Positives = 56/137 (40%)
Query: 73 TCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYIDENAVICLDGDGCKIRSGS 132
+C PV D I NNI L + I+ K+ + P +E + LD C+I G
Sbjct: 138 SC-PV-DRIVFNNI---ILRKCHGGKIQ-KTIAVKKPVKPAEEQVEVDLDQTSCEICGGR 191
Query: 133 MVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA--------EVPQNS 184
D + CD CD YH C+ + + W CP C+A ++ +
Sbjct: 192 ------DREDRLLLCDGCDAGYHMECLTPPLDAVPVEEWFCPECIANNRTSGSEQISEEE 245
Query: 185 SIDLTQSTNDQSGPENA 201
S L +++ +S P A
Sbjct: 246 SSSLPTTSHSRSRPTRA 262
Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 26 RCGICMDVVIDRGVL--DCCQHWFCFACIDNWSTITNLCPL 64
+C IC++ ++ V + C+H+FC CI WS N CP+
Sbjct: 101 KCPICLNSFHEQPVATPETCEHYFCLDCILEWSKNANSCPV 141
Score = 71 (30.1 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 77/371 (20%), Positives = 148/371 (39%)
Query: 267 ESNERTDIQSMLQAQEPELSFSQDASFCLPST--SLGSSEVKTDSADEKLNEQSSCG--G 322
+S +D ++ +SF++ + P++ +LGSS +KT +SSC
Sbjct: 899 QSPHHSDPMNIPVPSGASVSFTKCETMLEPTSCETLGSSFLKTQECT-----RSSCTDRN 953
Query: 323 VKSFLG-KTFNEPYPGNKPSDCISNVDLHLGLSMSKSVADTNKYLTE-DQITGYVQQQNP 380
VKS L K EP P +P + L LS + + N E ++G + N
Sbjct: 954 VKSELNFKIEAEPTP-IRPQ----SKSLEESLSNLQQTSQHNLVCKELPSVSGVLNATNI 1008
Query: 381 S---EESLHEADKIEPGAKEENSQIIGGKRNHDNCSGINKEITTKKVTEVPAKKIRAE-K 436
S EE H++ + N Q K H +KE + ++ R++ K
Sbjct: 1009 SVDREEKSHQSQSKDNKQSPSNCQSFHYKDCHKTKHSRSKEKRRSRSRSRDRRRSRSKSK 1068
Query: 437 LTQTNPHKDEANASILANSKKFPTLIAGRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLPK 496
Q + K+ + + + K+ + + R K + + SD + K +
Sbjct: 1069 ERQRSRSKERKH--VHSRDKRCSSSSSRERSTSGK---KVICERSDNRGRERQRKRPKER 1123
Query: 497 GLAHKNSADRS-SKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIREAVRNRSSKDC 555
+ +S RS S++R+++S + KR + S+ ++ R++ +R K
Sbjct: 1124 RYSRSHSYSRSRSRERKSMSKCQGDSRSKRQKSELRSTSRERKKREDQLGKSLHRE-KSF 1182
Query: 556 DENLFDPKLLAAFRAAIAGPKC-EPVKQPAHLAVKVKKSMLEKGKVRESLTKKIYGNSNG 614
E++ +P + A++ K E VK + ++ M K ++E L + S+G
Sbjct: 1183 QESI-EPMSIELHEASVGANKTTESVKMERDARLCDREIMCIKPSIKE-LEPRSMNKSHG 1240
Query: 615 ---RRRRAWNR 622
+ W+R
Sbjct: 1241 LGSSKHGDWSR 1251
Score = 55 (24.4 bits), Expect = 0.00064, Sum P(4) = 0.00064
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 261 DRNAKSESN-----ERTDIQSMLQAQEPELSFSQDAS----FC--LPSTS--LGSSEVKT 307
DRN KSE N E T I+ ++ E LS Q S C LPS S L ++ +
Sbjct: 951 DRNVKSELNFKIEAEPTPIRPQSKSLEESLSNLQQTSQHNLVCKELPSVSGVLNATNISV 1010
Query: 308 DSADEKLNEQS 318
D ++ QS
Sbjct: 1011 DREEKSHQSQS 1021
Score = 53 (23.7 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 27/104 (25%), Positives = 43/104 (41%)
Query: 1061 KNEHKDSTCLLESHSDAVIRSSTTEDGTSKPC--IPLES----LPCEEGEDLSLAECEEL 1114
K E D + E+ S+ + T+ T KPC P S +P G +S +CE +
Sbjct: 869 KIEPVDMDPVREAGSEICVEVKTS---TCKPCQQSPHHSDPMNIPVPSGASVSFTKCETM 925
Query: 1115 YGPDK-EPLVSKF---PEVSQKPCGLLDGEAQAENKCAGEASDI 1154
P E L S F E ++ C + +++ K E + I
Sbjct: 926 LEPTSCETLGSSFLKTQECTRSSCTDRNVKSELNFKIEAEPTPI 969
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 588 VKVKKSMLEKGKVRESLTKKIYGNSNGRRRRA 619
VK +K + + K+R L K NS GR R+
Sbjct: 355 VKRRKRKVRRSKLRRKLVVKKETNSRGRIARS 386
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 22/100 (22%), Positives = 40/100 (40%)
Query: 1073 SHSDAVIRSSTTEDGTSKPCIPLESLPCEEGEDLSLAECEE-LYGP-DKEPLVSKFPEVS 1130
S A + +D SK L SL +GE ++ L P +KE +V ++
Sbjct: 1522 SRRSAATPQLSNQDKASKVTATLSSLQSPQGESSKPKSRKDVLQDPNEKEKVVGYMKKLH 1581
Query: 1131 QKPCGLLDGEAQAENKCAGEASDIGNEQHDEDISCGKEKL 1170
+ + E + K + DI E++ E + +K+
Sbjct: 1582 MQERAI--EEVKLAIKPFYQKRDITKEEYKEILRKAVQKV 1619
>DICTYBASE|DDB_G0294609 [details] [associations]
symbol:polD3 "DNA polymerase delta subunit 3"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISS]
[GO:0043625 "delta DNA polymerase complex" evidence=ISS]
InterPro:IPR019038 Pfam:PF09507 dictyBase:DDB_G0294609
GO:GO:0006260 EMBL:AAFI02000032 GO:GO:0043625 KO:K03504
RefSeq:XP_001732994.1 EnsemblProtists:DDB0233631 GeneID:8622184
KEGG:ddi:DDB_G0294609 OMA:WEEDEVP Uniprot:B0G131
Length = 697
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 104/515 (20%), Positives = 189/515 (36%)
Query: 248 KGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEPELSFSQDASFCLPSTSLGSSEVKT 307
+G N F+ D KS + + + SM EP+ S S T+ S + T
Sbjct: 194 QGSLNSFFSKTADD--GKSGNEAKVSLFSMFTKDEPK---SSTPSVKKEDTTKKSKNIST 248
Query: 308 DSADEK--LNEQSSCGGVKSFLGKTFNEPYPGNKPSDCISNVDLHLGLSMSKSVADTNKY 365
S+ K ++ G + S + K S+ S D+ L S K
Sbjct: 249 SSSSSKKAAAKKKDSGSINSIIKKKKRSSSDSEDESEN-SEDDIKL-----PSYKRNKKI 302
Query: 366 LTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNHDNCSGINKEITTKKVT 425
+ D + EE E ++ P + Q+ + DN S E KK
Sbjct: 303 IHNDS------DDSDKEEEEEEEEEKGPSFISKKRQLSSSSDSEDNHSDNESEQNIKKQK 356
Query: 426 EVPAKKIRAEKLTQTNPHKDEANASILANSKKFPTLIAGRRHEKSKLCPEKVDVTS-DIM 484
+++ E+L + K E ++ + +K KL EK++ +
Sbjct: 357 LEKEQQLEKERLEKEKKEKLEKEKKEKLEKERLEKEKL-EKEKKEKLEKEKLEKERLEKE 415
Query: 485 SIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVK-KIMKRPAEDKDSSELVQELRKEI 543
+ K K KL K K +R K++EN+ L+ K K + K+ + V+E KE+
Sbjct: 416 KLEKEKKEKLEKEKKEKEEKERLKKEKENLEKLKSKSKSPSKETSKKEKTIFVKEEEKEV 475
Query: 544 REAVRNRSSKDCDENLFDPKLLAAFRAAIAGPKCEPVKQPAHLAVKVKKSMLEKGKVRES 603
++ + K E + + I P+ P + S K +++
Sbjct: 476 KKEKEEKEVKKEKEEKEEEEEEEVIEKPIKKKSSTPIPTPTKSSQNKSSSTPTKSPIQKK 535
Query: 604 LTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATKTEKIGTLKSVLDLLRNNSQSS-DTE 662
K I + + ++ E E + +K + K K++++ + + + E
Sbjct: 536 --KSIIKQESDEEMKDQEQEDEEE-QEEEVIKTKRPVKKN--KTIVESSDDEEEKEKEKE 590
Query: 663 QSTECQETNPILSRLYLADTSVFPRKDNIMPLSALKATDNSEQSKEQAISMEKPL-KLSS 721
+ E Q +P LS+ +S+ ++ A AT + KE+ + EK +
Sbjct: 591 KEKEKQVKSPKLSKNATITSSIVKPAAPVVKQRA--ATSPKSKVKEEPVKKEKDEDQEEK 648
Query: 722 DNCASKVAETNKVSSKVGVLSAYEKGTRNMSCSKS 756
+ VAE K SK S+ +K T + S K+
Sbjct: 649 EEEEEPVAE-KKTKSK----SSPKKPTASKSKKKA 678
>FB|FBgn0259108 [details] [associations]
symbol:futsch "futsch" species:7227 "Drosophila melanogaster"
[GO:0008017 "microtubule binding" evidence=ISS;IDA] [GO:0005875
"microtubule associated complex" evidence=ISS;IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IMP] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0048749 "compound eye development"
evidence=NAS] [GO:0007399 "nervous system development"
evidence=NAS] [GO:0007528 "neuromuscular junction development"
evidence=NAS] [GO:0005874 "microtubule" evidence=IEA] [GO:0008088
"axon cargo transport" evidence=IMP] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IMP] [GO:0060052
"neurofilament cytoskeleton organization" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] InterPro:IPR009603
InterPro:IPR026074 Pfam:PF06740 GO:GO:0005737 GO:GO:0005875
GO:GO:0008355 GO:GO:0000226 GO:GO:0007528 EMBL:AE014298
GO:GO:0008088 GO:GO:0043524 GO:GO:0048813 GO:GO:0007409
eggNOG:NOG12793 GO:GO:0060052 GeneTree:ENSGT00550000074593
GO:GO:0008017 GO:GO:0005874 GO:GO:0048749 GO:GO:0008582
EMBL:AL031128 EMBL:EU523737 PIR:T13564 RefSeq:NP_001096864.1
RefSeq:NP_001162632.2 RefSeq:NP_001245461.1
ProteinModelPortal:Q9W596 SMR:Q9W596 IntAct:Q9W596 STRING:Q9W596
PaxDb:Q9W596 EnsemblMetazoa:FBtr0112628 EnsemblMetazoa:FBtr0307597
EnsemblMetazoa:FBtr0307598 GeneID:5740544 KEGG:dme:Dmel_CG34387
CTD:5740544 FlyBase:FBgn0259108 OMA:ESVKDEH OrthoDB:EOG47SQVR
PhylomeDB:Q9W596 ChiTaRS:futsch GenomeRNAi:5740544 NextBio:20891581
Bgee:Q9W596 GermOnline:CG3064 PANTHER:PTHR13843 Uniprot:Q9W596
Length = 5495
Score = 145 (56.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 228/1079 (21%), Positives = 430/1079 (39%)
Query: 174 PRCVAEVPQNSSIDLTQSTNDQSGPENANGDHLA--ESLFPRKVSVSVADAGETAVVVSM 231
P VAE ++ + + + +SG E + LA E+ P V+ S+ D E + S
Sbjct: 3478 PASVAESVKDEADKSKEESRRESGAEKSP---LASKEASRPASVAESIKDEAEKSKEESR 3534
Query: 232 ---IGEE---PNENFQSMLEIEKGVGNEAF-NPYGGDRNAKSESNERTDIQSMLQAQEPE 284
+ E+ P++ + + V +EA + R++ +E + ++ A E
Sbjct: 3535 RESVAEKSPLPSKEASRPTSVAESVKDEAEKSKEESRRDSVAEKSPLASKEASRPASVAE 3594
Query: 285 LSFSQDASFCLPSTSLGSSEVKTDSADEKLNEQSSCG-GVKSFLGKTFNEPYPGNKPSDC 343
S +A + S K+ A ++ + +S +K K+ E +
Sbjct: 3595 -SVQDEAEKSKEESRRESVAEKSPLASKEASRPASVAESIKDEAEKSKEESRRESVAEKS 3653
Query: 344 -ISNVDLHLGLSMSKSVADTNKYLTEDQITGYVQQQNP--SEESLHEADKIEPGAKE-EN 399
+++ + S+++SV D + E+ V +++P S+E+ A E E E
Sbjct: 3654 PLASKEASRPTSVAESVKDEAEKSKEESSRDSVAEKSPLASKEASRPASVAESVQDEAEK 3713
Query: 400 SQIIGGKRNHDNCSGINKEITTKKVTEVPAKKIRAEKLTQTNPHKDEANASILANSKKF- 458
S+ + + S + + ++ + + K AEK + + + A S LA+ +
Sbjct: 3714 SKEESRRESVAEKSPLASKEASRPASVAESVKDDAEKSKEESRRESVAEKSPLASKEASR 3773
Query: 459 PTLIAGRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLP-KGLAHKNSADRSSKDRENVSGL 517
P +A E K EK S S+ + K LP K + S S KD S
Sbjct: 3774 PASVA----ESVKDEAEKSKEESRRESVAE--KSPLPSKEASRPTSVAESVKDEAEKS-- 3825
Query: 518 RVKKIMKRPAEDKDSSELVQELRK--EIREAVRNRSSKDCDENLFDPKLLAAFRAAIAGP 575
K+ +R + + SS ++ + + E+V++ + K +E+ + A ++ +A
Sbjct: 3826 --KEESRRESVAEKSSLASKKASRPASVAESVKDEAEKSKEESRRES---VAEKSPLASK 3880
Query: 576 KCEPVKQPAHLAVKVKKSMLEKGKVRESLTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMK 635
+ +PA +A VK EK K ES + + S + A E K K
Sbjct: 3881 EAS---RPASVAESVKDEA-EKSK-EESRRESVAEKSPLPSKEASRPTSVAESVKDEADK 3935
Query: 636 ATKTEK--IGTLKSVLDLLRNNSQSSDTEQ-STECQETNPILSRLYLADTSVFPRKDNIM 692
+ + + G KS L + + +S E E +++ R + + S P K+
Sbjct: 3936 SKEESRRESGAEKSPLASMEASRPTSVAESVKDETEKSKEESRRESVTEKSPLPSKEASR 3995
Query: 693 PLSALKAT-DNSEQSKEQAISMEKPLKLSSDNCASKVAETNKVSSKVGVLSAYEKGTRNM 751
P S ++ D +E+SKE++ E + S ASK E+++ +S + +GT+
Sbjct: 3996 PTSVAESVKDEAEKSKEES-RRESVAEKSP--LASK--ESSRPASVAESIKDEAEGTKQE 4050
Query: 752 SCSKSNAALSKVHPIQLGDPKVNSLKGTATSDDVKVDKRKWALEILARKTAVACKSATHE 811
S +S K I+ GD + K T+ D V V+ K E +A+ KS
Sbjct: 4051 SRRESMPESGKAESIK-GDQSSLASKETSRPDSV-VESVKDETE-KPEGSAID-KSQVAS 4106
Query: 812 KPEDTAMLKRNY--PLLARLP--ADMKPVLAPSHHNKIPISVRQTQLYRLTEF--FLRKA 865
+PE A+ ++ PL +R AD P S +SV +T + E +
Sbjct: 4107 RPESVAVSAKDEKSPLHSRPESVADKSP--DASKEASRSLSVAETASSPIEEGPRSIADL 4164
Query: 866 NLPV-IRRTAETEL-AVADAVNIEK----EVADRSNSKLVYLNLCSHEISCRSDNKKSTR 919
+LP+ + A+ +L ++ +++ + EV S+ + L+ + E S + T
Sbjct: 4165 SLPLNLTGEAKGKLPTLSSPIDVAEGDFLEVKAESSPRPAVLSKPA-EFS--QPDTGHTA 4221
Query: 920 ATESNSSAPPAVPIDELERATDKL--STDHSVEEALRNAGLLSDSPPNSPHHPT------ 971
+T + ++P I+ +E+ T +T + E L + T
Sbjct: 4222 STPVDEASPVLEEIEVVEQHTTSGVGATGATAETDLLDLTETKSETVTKQSETTLFETLT 4281
Query: 972 -EVPSEVDISSMETGEGEPDNVFEMESHAEMDIYGDFEY--DLEDEDFIGVSAMKVSNLQ 1028
+V S+V++ + E + V AE + E E + ++ +N
Sbjct: 4282 SKVESKVEVLESSVKQVE-EKVQTSVKQAETTVTDSLEQLTKKSSEQLTEIKSVLDTNF- 4339
Query: 1029 PEEVSKVKV-VFSTLNSEK-LNNVVDNKVGGGLEKNEHKDSTCLLESHSDAVIRSSTTED 1086
EEV+K+ V L S+K + +++ + LE E ST E SD R + +
Sbjct: 4340 -EEVAKIVADVAKVLKSDKDITDIIPDFDERQLE--EKLKSTADTEEESDKSTRDEKSLE 4396
Query: 1087 GTSKPCIPLE-SLPCEEGEDLSLAECEELYGPDKEPL-----VSKFPE-VSQKPCGLLDG 1139
+ K I E S P ++ +S+ E +++ +K L S PE V+ +P +
Sbjct: 4397 ISVKVEIESEKSSPDQKSGPISIEEKDKIEQSEKAQLRQGILTSSRPESVASQPESV--- 4453
Query: 1140 EAQAENKCAGEASDIG-NEQHDEDISCGKEKLTDDVQTGD-GTLRKXXXXXXXXXKRHD 1196
+ +++ + E ++ +E H + S E + V D T R K D
Sbjct: 4454 PSPSQSAASHEHKEVELSESHKAEKSSRPESVASQVSEKDMKTSRPASSTSQFSTKEGD 4512
>UNIPROTKB|F8W6K1 [details] [associations]
symbol:SCAF11 "Protein SCAF11" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC000015 HGNC:HGNC:10784 ChiTaRS:SCAF11
EMBL:AC084878 IPI:IPI00852713 ProteinModelPortal:F8W6K1 SMR:F8W6K1
Ensembl:ENST00000266589 ArrayExpress:F8W6K1 Bgee:F8W6K1
Uniprot:F8W6K1
Length = 118
Score = 110 (43.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 13 DNT-ENDLLNFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEF 69
DNT LL E RC IC++ ++++ G + C H FC CI W+ CP+ + F
Sbjct: 42 DNTISTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAETLASCPIDRKPF 101
Query: 70 QLI 72
Q +
Sbjct: 102 QAV 104
>FB|FBgn0037344 [details] [associations]
symbol:CG2926 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
Prosite:PS00518 EMBL:AE014297 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 GO:GO:0000381 HSSP:Q9UIG0
GeneTree:ENSGT00530000063661 FlyBase:FBgn0037344 RefSeq:NP_649554.1
ProteinModelPortal:Q9VNE0 SMR:Q9VNE0 IntAct:Q9VNE0 MINT:MINT-746219
STRING:Q9VNE0 PRIDE:Q9VNE0 EnsemblMetazoa:FBtr0078752 GeneID:40676
KEGG:dme:Dmel_CG2926 UCSC:CG2926-RA InParanoid:Q9VNE0 OMA:YEDLFEP
PhylomeDB:Q9VNE0 GenomeRNAi:40676 NextBio:819988
ArrayExpress:Q9VNE0 Bgee:Q9VNE0 Uniprot:Q9VNE0
Length = 2296
Score = 143 (55.4 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 58/204 (28%), Positives = 81/204 (39%)
Query: 10 FQVDNTENDLLNFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQG 67
F D + NDLL +C IC+ + G C+H FC ACID WS CP+ +
Sbjct: 142 FSSDISSNDLLE----KCPICLLTFRQQEIGTPATCEHIFCAACIDAWSRNVQTCPIDRI 197
Query: 68 EFQLITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYIDENAVICLDGDGCK 127
EF I V D+ S + + D S KSNT D A+ + C+
Sbjct: 198 EFDRII---VRDSYASRRVVREVRL---DLS---KSNTELVVDDEADTAALSEEEVTNCE 248
Query: 128 IRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA--EVPQNSS 185
I E D + CDSC+ YH C+ +W C C+ + N
Sbjct: 249 I------CESPDREDVMLLCDSCNQGYHMDCLDPPLYEIPAGSWYCDNCIDSDDEDDNEQ 302
Query: 186 IDLTQSTNDQSGPENANGDHLAES 209
++L DQ E+ G L E+
Sbjct: 303 LELADDL-DQLY-EDIRGMGLPET 324
Score = 64 (27.6 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 21/100 (21%), Positives = 50/100 (50%)
Query: 464 GRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIM 523
G +++ CP + + ++ + +P G+ H AD S KD ++++ + ++
Sbjct: 817 GNQNDDVDNCPNFSIYSQESQAVANASA--MPSGVPH-GPADASDKDDDDMN----EDLV 869
Query: 524 KRPAEDKDSSELVQELRKEIREAVRNRSSKDCDENLFDPK 563
+ +D+D+ ++ L E E V + K D++L++P+
Sbjct: 870 QLDDDDEDT-DIPLPLGPE-PEPVPEKVPKSSDDDLYEPE 907
Score = 49 (22.3 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 915 KKSTRATESNSSAPPAVPIDELERATDKLSTDHSVEE----ALRNAG---LLSDSPPNSP 967
+K+ ++ +APP P A D LS+ +++ A RN G + +D N P
Sbjct: 532 RKALLQGKARIAAPPTAPTSA--PAADILSSILDLQDRWHDASRNLGEVHIRADGTLNIP 589
Query: 968 HHPTEVPSEVDISSMETGEGE 988
P +E + T + E
Sbjct: 590 QRPAPTATEAPLPKAGTSKTE 610
Score = 48 (22.0 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 19/89 (21%), Positives = 35/89 (39%)
Query: 925 SSAPPAVPIDELERATDKLSTDHSVEEA----LRNAGLLSDSPPNSPHHPTEVPSEVDIS 980
S PP+ LER ++ ++H + + L L + + H S S
Sbjct: 1019 SKRPPSKKDTSLERDVNESGSEHEQDRSYTPCLDEKNLAEEEEAGTTHQNNVSTSPKTRS 1078
Query: 981 SMETG-EGEPDNVFEMESHAEMDIYGDFE 1008
S +G E EP+ + +E ++ + E
Sbjct: 1079 SKVSGDEDEPEKAVGTDIQSEDELNNENE 1107
Score = 46 (21.3 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 1072 ESHSDAVIRSSTTEDGTSKPCIPLESLPCEEGEDLSLAECEELYGPDKEPLVSKFPEVSQ 1131
+ + D V ED T P +PL P E + + ++LY P+ + PE+ +
Sbjct: 863 DMNEDLVQLDDDDED-TDIP-LPLGPEPEPVPEKVPKSSDDDLYEPENPTEEPEEPEMFE 920
Query: 1132 KPCGLLDGE 1140
+ C + E
Sbjct: 921 ESCDAVPTE 929
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(5) = 0.00050
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 617 RRAWNRDCEVEFWKYRCMKATKTEKIGTLKSVLDL-LRNNSQSSDTEQSTE 666
RR RD + E + + KT ++G+L ++++ N +QS+ + E
Sbjct: 1750 RRERERDRDHELMRENGQRE-KTPQVGSLDAIMETSYENMTQSTGPKTPPE 1799
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(5) = 0.00050
Identities = 32/114 (28%), Positives = 47/114 (41%)
Query: 962 SPPNSPHHPTEVPSE-VD---ISSMETG--------EGEPDNVFEMESHAEMDIYGDFEY 1009
SP SP PT PS+ +D +S +G +GE D S+A +
Sbjct: 1884 SPSLSPRSPTLTPSQNLDQQTVSMPASGAIGPGSGDKGESDGAHVTGSNASTNTQAQGNA 1943
Query: 1010 DLEDEDFIGVSAMKVSN----LQPE-EVSKVKVVFSTLNSEKLNNVVDNKVGGG 1058
L D + ++ M N +Q E EVS + + S+ S L V + GGG
Sbjct: 1944 -LNPVDLV-MALMNKPNQSGSIQQESEVSSAQYISSSSLSLSLG--VGSSTGGG 1993
Score = 40 (19.1 bits), Expect = 0.00076, Sum P(5) = 0.00076
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 675 SRLYLADTSVFPRKDNIMPLSALKATDNSEQSKEQAISMEKPLKLSSDNCASKVAETNKV 734
S LY+ PR S K+ + + K++ +K K + + + A ++
Sbjct: 1454 SSLYMGSPHYTPRISRSRSRSRSKSPKDMHKKKKKKSDKKKRRKRTGSSSPTTAARMRRI 1513
Query: 735 S 735
S
Sbjct: 1514 S 1514
Score = 40 (19.1 bits), Expect = 0.00076, Sum P(5) = 0.00076
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 911 RSDNKKSTRATESNSSAPPAVPIDELERATDKL--STDHSVEEALRN-AGLLSD--SPPN 965
+SD KK + T S SS A + + R D + D + R AG+ + SP
Sbjct: 1489 KSDKKKRRKRTGS-SSPTTAARMRRISRQRDPFEDADDFLAPQRKRKKAGITTGQWSPSP 1547
Query: 966 SP 967
SP
Sbjct: 1548 SP 1549
Score = 39 (18.8 bits), Expect = 0.00093, Sum P(5) = 0.00093
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 919 RATESN---SSAPPAVPIDELERATDKLSTDHS 948
R T +N + +P P ERAT + + HS
Sbjct: 1404 RQTSTNRRYARSPSPAPSPRNERATSPVQSVHS 1436
Score = 37 (18.1 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 249 GVGNEAFNPYGGDRNAKSES 268
G GN+ F+ G + N S
Sbjct: 690 GFGNQNFSSSGSNNNTNMSS 709
>DICTYBASE|DDB_G0281183 [details] [associations]
symbol:DDB_G0281183 "RING zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR002483
Pfam:PF01480 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0281183 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000040 GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG244178
RefSeq:XP_640869.1 ProteinModelPortal:Q54UA7
EnsemblProtists:DDB0233761 GeneID:8622925 KEGG:ddi:DDB_G0281183
InParanoid:Q54UA7 OMA:PWIKREL Uniprot:Q54UA7
Length = 548
Score = 135 (52.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 2 ESMLEEQTFQVDNTENDL-LNFEC--GRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI 58
E+ +EE+ + D+ E D L C C IC+ + LD C H FCF CI WS +
Sbjct: 72 ENEIEEEEYNNDDEEVDKPLKLICEDSTCSICLSPFENLTFLDICFHQFCFVCILQWSEL 131
Query: 59 TNLCPLCQGEF 69
CPLC+ E+
Sbjct: 132 NQRCPLCKSEY 142
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 1043 NSEKLNNVVDNKVGGGLEKNEHKDS 1067
NS NN ++N ++KN +K++
Sbjct: 518 NSNNNNNNINNSNNNNIKKNNNKNN 542
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 19/101 (18%), Positives = 43/101 (42%)
Query: 183 NSSIDLTQSTNDQSGPENANGDHLAESLFPRKVSVSVADAGETAVVVSMIGEEPNENFQS 242
N++ + + N+++ EN N + ES+ P + ++ + S + E +
Sbjct: 360 NNNNNNNNNNNNENNNENNNKNGNEESMEPLSQILQQTNS-PIKHIPSFLSNILTEEIEK 418
Query: 243 MLEIEKGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEP 283
IEK N +R + ++ +I+ +L+ +EP
Sbjct: 419 QELIEK---ERIENDIQSERKRIIQIDQEENIRKILRLKEP 456
Score = 38 (18.4 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 1040 STLNSEKLNNVVDNKVGGGLEKNEHKD 1066
S N+ +NN +N + KN + D
Sbjct: 519 SNNNNNNINNSNNNNIKKNNNKNNNND 545
>UNIPROTKB|F1NFF0 [details] [associations]
symbol:Gga.41084 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003618
InterPro:IPR017890 InterPro:IPR019787 Pfam:PF00628 Pfam:PF07500
PROSITE:PS50016 PROSITE:PS51321 SMART:SM00249 SMART:SM00510
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.472.30 InterPro:IPR012921 Pfam:PF07744 SUPFAM:SSF46942
GeneTree:ENSGT00530000063844 EMBL:AADN02019222 EMBL:AADN02019223
IPI:IPI00821338 Ensembl:ENSGALT00000039659 ArrayExpress:F1NFF0
Uniprot:F1NFF0
Length = 2253
Score = 112 (44.5 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 95/450 (21%), Positives = 160/450 (35%)
Query: 134 VAEESSNLDTSIACDSCDLWYHAFCVGFDP------EGTCEDTWLCPRCVAEVPQNSSID 187
+ + N I CD C+ W+H CVG E ED ++CP C Q+ SI
Sbjct: 293 ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGED-YICPNCTILQGQDESIS 351
Query: 188 LTQSTNDQSGPENANGDHLAE-SLFPRKVSVSVADAGETAVVVSMIGEEPNENFQSMLE- 245
T ++G N +G K G + G++ + FQ +++
Sbjct: 352 ETDQQEAKAGQVNVDGTEFTSIGTIEHKSVEDQGIKGRIEKAANPSGKKKLKIFQPVVDA 411
Query: 246 --IEKGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEPELSFSQDASFCLPSTSLGSS 303
+ K +G FN D + SN+ I A LS +D P
Sbjct: 412 PGVSKCIGPGCFNVAQPD--SVYCSNDC--ILKHAAATMKYLSTGKDTK---PKP----- 459
Query: 304 EVKTDSADEKLNEQSSCGGVKSFLGKTFNEPYPGNK---PSDCISNVDLHLGLSMSKSVA 360
+ KT EK G KS L + +P K P +NV + LS +K+ A
Sbjct: 460 KEKTKPKSEKP------GVTKSHL-QASTKPLSNQKRQFPEKKETNVKKTV-LSAAKTEA 511
Query: 361 DTNKYLTEDQITGYVQQQNPSEESLHEADKIEPGAKEE-NSQII-----GGKRNHDNCS- 413
+T E + PS S H + ++P +S ++ G K+ D +
Sbjct: 512 NTQPIAREPA----AENTTPSWASDHNYNAVKPEKTAAISSSLLFKSQKGEKKKEDKAAE 567
Query: 414 ---GINKEITTKKVTEVPAKKIRAEKLTQTNPHKDE---ANASILANSKKFPTLIAGRRH 467
+ + + V E + L + P + +++ F +I +
Sbjct: 568 HTVASKRAVASTSVAEKQTSSLTKNLLPKKAPTFSSLPLTKQPLKSSTGSFKGVIPKKPW 627
Query: 468 EKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMKRPA 527
S P K S+ K G K A S S ++V I P
Sbjct: 628 PSSDSVPSKPSAPPG-SSLPKKPVASSSLGAGLKRPAPSSVPTASGSSQVKVSAI---PI 683
Query: 528 EDKDSSELVQELRKEIREAVRNRSSKDCDE 557
+ + +S++ Q +R+ ++E + R + D D+
Sbjct: 684 QSQPNSQIRQNIRRSLKEILWKRVN-DSDD 712
Score = 88 (36.0 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 30/119 (25%), Positives = 54/119 (45%)
Query: 909 SCRSDNKKSTRATESNSSAPPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPPNSPH 968
+ +S N+K+ A E +A P +D + + ++S D ++EE D P P
Sbjct: 1373 TAQSSNQKAQAAAEGGMAAVPL--LDPIVQQFGQMSKDKAIEEE-------EDDRPYDPE 1423
Query: 969 HPTEVPSEVDISSMETGEGEPDNVFEMESHAEMDIYGDFEYDLEDEDFIGVSAMKVSNL 1027
+ P + M+TGE E ++ +E + + D YD EDE + + + V +L
Sbjct: 1424 EEYD-PEKA--FEMQTGESE--KLYSVEKPSNTAVLEDEAYDPEDETILEEAKVTVDDL 1477
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1115 YGPDKEPLVSKFPEVSQKPCGL-LDGEAQAENK 1146
YG + P + FPE ++ P G++Q K
Sbjct: 1997 YGGPRGPSPALFPEQNEPPSRFHFQGQSQQSMK 2029
>UNIPROTKB|F1NGH5 [details] [associations]
symbol:Gga.41084 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003618
InterPro:IPR017890 InterPro:IPR019787 Pfam:PF00628 Pfam:PF07500
PROSITE:PS50016 PROSITE:PS51321 SMART:SM00249 SMART:SM00510
GO:GO:0005634 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.472.30 InterPro:IPR012921 Pfam:PF07744
SUPFAM:SSF46942 OMA:PNRMCAD GeneTree:ENSGT00530000063844
EMBL:AADN02019222 EMBL:AADN02019223 IPI:IPI00577866
Ensembl:ENSGALT00000009066 ArrayExpress:F1NGH5 Uniprot:F1NGH5
Length = 2287
Score = 112 (44.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 95/450 (21%), Positives = 160/450 (35%)
Query: 134 VAEESSNLDTSIACDSCDLWYHAFCVGFDP------EGTCEDTWLCPRCVAEVPQNSSID 187
+ + N I CD C+ W+H CVG E ED ++CP C Q+ SI
Sbjct: 293 ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGED-YICPNCTILQGQDESIS 351
Query: 188 LTQSTNDQSGPENANGDHLAE-SLFPRKVSVSVADAGETAVVVSMIGEEPNENFQSMLE- 245
T ++G N +G K G + G++ + FQ +++
Sbjct: 352 ETDQQEAKAGQVNVDGTEFTSIGTIEHKSVEDQGIKGRIEKAANPSGKKKLKIFQPVVDA 411
Query: 246 --IEKGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEPELSFSQDASFCLPSTSLGSS 303
+ K +G FN D + SN+ I A LS +D P
Sbjct: 412 PGVSKCIGPGCFNVAQPD--SVYCSNDC--ILKHAAATMKYLSTGKDTK---PKP----- 459
Query: 304 EVKTDSADEKLNEQSSCGGVKSFLGKTFNEPYPGNK---PSDCISNVDLHLGLSMSKSVA 360
+ KT EK G KS L + +P K P +NV + LS +K+ A
Sbjct: 460 KEKTKPKSEKP------GVTKSHL-QASTKPLSNQKRQFPEKKETNVKKTV-LSAAKTEA 511
Query: 361 DTNKYLTEDQITGYVQQQNPSEESLHEADKIEPGAKEE-NSQII-----GGKRNHDNCS- 413
+T E + PS S H + ++P +S ++ G K+ D +
Sbjct: 512 NTQPIAREPA----AENTTPSWASDHNYNAVKPEKTAAISSSLLFKSQKGEKKKEDKAAE 567
Query: 414 ---GINKEITTKKVTEVPAKKIRAEKLTQTNPHKDE---ANASILANSKKFPTLIAGRRH 467
+ + + V E + L + P + +++ F +I +
Sbjct: 568 HTVASKRAVASTSVAEKQTSSLTKNLLPKKAPTFSSLPLTKQPLKSSTGSFKGVIPKKPW 627
Query: 468 EKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMKRPA 527
S P K S+ K G K A S S ++V I P
Sbjct: 628 PSSDSVPSKPSAPPG-SSLPKKPVASSSLGAGLKRPAPSSVPTASGSSQVKVSAI---PI 683
Query: 528 EDKDSSELVQELRKEIREAVRNRSSKDCDE 557
+ + +S++ Q +R+ ++E + R + D D+
Sbjct: 684 QSQPNSQIRQNIRRSLKEILWKRVN-DSDD 712
Score = 88 (36.0 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 30/119 (25%), Positives = 54/119 (45%)
Query: 909 SCRSDNKKSTRATESNSSAPPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPPNSPH 968
+ +S N+K+ A E +A P +D + + ++S D ++EE D P P
Sbjct: 1373 TAQSSNQKAQAAAEGGMAAVPL--LDPIVQQFGQMSKDKAIEEE-------EDDRPYDPE 1423
Query: 969 HPTEVPSEVDISSMETGEGEPDNVFEMESHAEMDIYGDFEYDLEDEDFIGVSAMKVSNL 1027
+ P + M+TGE E ++ +E + + D YD EDE + + + V +L
Sbjct: 1424 EEYD-PEKA--FEMQTGESE--KLYSVEKPSNTAVLEDEAYDPEDETILEEAKVTVDDL 1477
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1115 YGPDKEPLVSKFPEVSQKPCGL-LDGEAQAENK 1146
YG + P + FPE ++ P G++Q K
Sbjct: 2025 YGGPRGPSPALFPEQNEPPSRFHFQGQSQQSMK 2057
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 102 (41.0 bits), Expect = 0.00037, P = 0.00037
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 27 CGICMDVVIDRGVLDCCQHWFCFACIDNW-STITN--LCPLCQGEFQLITCVPVY 78
C IC+D D V+ C H FC+ C+ W T N +CP+C+ +P+Y
Sbjct: 4 CNICLDTAKD-AVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 57
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 102 (41.0 bits), Expect = 0.00037, P = 0.00037
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 12 VDNTENDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNW---STITNLCPLCQGE 68
+ N E+D N G C IC+++ + ++ C H FC+ C+ W + +N CP+C+
Sbjct: 6 ITNEEDDASN-NFG-CNICLELAREP-IVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKAL 62
Query: 69 FQLITCVPVYDTIGSNNIDGDS-LSRG 94
+ T VP+Y +G + D S L+ G
Sbjct: 63 VKEDTLVPLYG-MGKPSSDPRSKLNSG 88
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 96 (38.9 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 27 CGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCV 75
C IC++ D+ G + C H+FC CI WS N CP+ + F+ I C+
Sbjct: 104 CPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCI-CI 153
Score = 86 (35.3 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 134 VAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178
V S D + CD CD YH C+ + D W CP C A
Sbjct: 184 VCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAA 228
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 487 VKGTKCKLPKGLA--HKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIR 544
V G K K P G + K+SA RS K + V R KK+ K A + LR+ +
Sbjct: 343 VPGRK-KTPSGPSAKSKSSATRSKKRQHRVKKRRGKKV-KSEATTRSRIARTLGLRRPVH 400
Query: 545 EA 546
+
Sbjct: 401 SS 402
Score = 49 (22.3 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 19/85 (22%), Positives = 30/85 (35%)
Query: 905 SHEISCRSDNKKSTRATESNSSAPPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPP 964
S E CR +++ + A P D +R + S++H E R P
Sbjct: 1124 SLERLCRHKHQRERSHERPDRKESVAWPRDRRKRRSRSPSSEHRAREHRRPRSR-EKWPQ 1182
Query: 965 NSPHHPTEVPSEVDISSMETGEGEP 989
H P + + S +GEP
Sbjct: 1183 TRSHSPERKGAVREASPAPLAQGEP 1207
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 96 (38.9 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 27 CGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCV 75
C IC++ D+ G + C H+FC CI WS N CP+ + F+ I C+
Sbjct: 107 CPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCI-CI 156
Score = 86 (35.3 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 134 VAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178
V S D + CD CD YH C+ + D W CP C A
Sbjct: 187 VCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAA 231
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 487 VKGTKCKLPKGLA--HKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIR 544
V G K K P G + K+SA RS K + V R KK+ K A + LR+ +
Sbjct: 346 VPGRK-KTPSGPSAKSKSSATRSKKRQHRVKKRRGKKV-KSEATTRSRIARTLGLRRPVH 403
Query: 545 EA 546
+
Sbjct: 404 SS 405
Score = 49 (22.3 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 19/85 (22%), Positives = 30/85 (35%)
Query: 905 SHEISCRSDNKKSTRATESNSSAPPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPP 964
S E CR +++ + A P D +R + S++H E R P
Sbjct: 1126 SLERLCRHKHQRERSHERPDRKESVAWPRDRRKRRSRSPSSEHRAREHRRPRSR-EKWPQ 1184
Query: 965 NSPHHPTEVPSEVDISSMETGEGEP 989
H P + + S +GEP
Sbjct: 1185 TRSHSPERKGAVREASPAPLAQGEP 1209
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 96 (38.9 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 27 CGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCV 75
C IC++ D+ G + C H+FC CI WS N CP+ + F+ I C+
Sbjct: 108 CPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCI-CI 157
Score = 86 (35.3 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 134 VAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178
V S D + CD CD YH C+ + D W CP C A
Sbjct: 188 VCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAA 232
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 487 VKGTKCKLPKGLA--HKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIR 544
V G K K P G + K+SA RS K + V R KK+ K A + LR+ +
Sbjct: 347 VPGRK-KTPSGPSAKSKSSATRSKKRQHRVKKRRGKKV-KSEATTRSRIARTLGLRRPVH 404
Query: 545 EA 546
+
Sbjct: 405 SS 406
Score = 49 (22.3 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 19/85 (22%), Positives = 30/85 (35%)
Query: 905 SHEISCRSDNKKSTRATESNSSAPPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPP 964
S E CR +++ + A P D +R + S++H E R P
Sbjct: 1128 SLERLCRHKHQRERSHERPDRKESVAWPRDRRKRRSRSPSSEHRAREHRRPRSR-EKWPQ 1186
Query: 965 NSPHHPTEVPSEVDISSMETGEGEP 989
H P + + S +GEP
Sbjct: 1187 TRSHSPERKGAVREASPAPLAQGEP 1211
>RGD|1598325 [details] [associations]
symbol:Scaf11 "SR-related CTD-associated factor 11"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1598325 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 IPI:IPI00392552 Ensembl:ENSRNOT00000034989
UCSC:RGD:1598325 ArrayExpress:F1M4Q2 Uniprot:F1M4Q2
Length = 1392
Score = 114 (45.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 6 EEQTFQVDNTENDLLNFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCP 63
EE D + LL E RC IC+ ++ + G + C H FC ACI W+ I CP
Sbjct: 29 EENRNNADTS--GLLYSEVDRCPICLSCLLGKEVGFPESCNHVFCMACILKWAEILASCP 86
Query: 64 LCQGEFQLITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYIDENAVICLDG 123
+ + FQ + + ++ G I SR +++K N SF + +
Sbjct: 87 IDRKPFQAVFELRAFE--GCAKIQVKRRSR----ELDDKENEESFKKQLVYHESSKSDKR 140
Query: 124 DGCKIRSGSMVAEESSNL 141
G +R ++ E S +L
Sbjct: 141 KGNTVRE-DLLCERSDDL 157
Score = 69 (29.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 54/240 (22%), Positives = 88/240 (36%)
Query: 923 SNSSAPPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPPNS-PHHPTEVPSEVDISS 981
SNSS + P E E+ T + SV R L P S P P E + D
Sbjct: 358 SNSSVSISPPA-ESEKQTRQAPKRKSVRRG-RKPPSLKKKPRKSLP--PAEKTTSSDSVE 413
Query: 982 METGEGEPDNVFEMESHAEMDIYGDFEYDLEDEDFIGVSAMKVSNLQPEEVSKVK---VV 1038
+T + + V E E + ++ ++E+ + ++ + Q EE + K +
Sbjct: 414 EDTVDSDTPPVLEKEQQSCVESSSICSIQTDEENHLA-KCLESCDEQTEENEQTKNHEIE 472
Query: 1039 FST--LNSEKLNNVVDNKVG--GGLEKNEH-KDSTCLLESHSDAVIRSSTTEDGTSKPCI 1093
T LNSE VG G+E E D+ +S E G+
Sbjct: 473 EQTEILNSESCTQYPPVLVGEDSGIEAKELCVDNDVSTDSSLKGSDPLENQEQGSGSSGS 532
Query: 1094 PLESLPCEEG--EDLSLAECEELYGPDKEPLVSKFPEVSQKPCGLLDGEAQAENKCAGEA 1151
+++ C E ED ++ G +P+ EVS+ +L E ++ G A
Sbjct: 533 EVQASVCTESPPEDFLTCPPSDIEG--HQPVSGPLGEVSENATPVLSDERAEDSLMVGNA 590
>RGD|2319802 [details] [associations]
symbol:LOC100365068 "rCG50794-like" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:2319802 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0000245 GeneTree:ENSGT00530000063661
OrthoDB:EOG4G7BXK IPI:IPI00959123 Ensembl:ENSRNOT00000007003
ArrayExpress:D4ABH1 Uniprot:D4ABH1
Length = 1407
Score = 114 (45.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 6 EEQTFQVDNTENDLLNFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCP 63
EE D + LL E RC IC+ ++ + G + C H FC ACI W+ I CP
Sbjct: 22 EENRNNADTS--GLLYSEVDRCPICLSCLLGKEVGFPESCNHVFCMACILKWAEILASCP 79
Query: 64 LCQGEFQLITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYIDENAVICLDG 123
+ + FQ + + ++ G I SR +++K N SF + +
Sbjct: 80 IDRKPFQAVFELRAFE--GCAKIQVKRRSR----ELDDKENEESFKKQLVYHESSKSDKR 133
Query: 124 DGCKIRSGSMVAEESSNL 141
G +R ++ E S +L
Sbjct: 134 KGNTVRE-DLLCERSDDL 150
Score = 69 (29.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 54/240 (22%), Positives = 88/240 (36%)
Query: 923 SNSSAPPAVPIDELERATDKLSTDHSVEEALRNAGLLSDSPPNS-PHHPTEVPSEVDISS 981
SNSS + P E E+ T + SV R L P S P P E + D
Sbjct: 351 SNSSVSISPPA-ESEKQTRQAPKRKSVRRG-RKPPSLKKKPRKSLP--PAEKTTSSDSVE 406
Query: 982 METGEGEPDNVFEMESHAEMDIYGDFEYDLEDEDFIGVSAMKVSNLQPEEVSKVK---VV 1038
+T + + V E E + ++ ++E+ + ++ + Q EE + K +
Sbjct: 407 EDTVDSDTPPVLEKEQQSCVESSSICSIQTDEENHLA-KCLESCDEQTEENEQTKNHEIE 465
Query: 1039 FST--LNSEKLNNVVDNKVG--GGLEKNEH-KDSTCLLESHSDAVIRSSTTEDGTSKPCI 1093
T LNSE VG G+E E D+ +S E G+
Sbjct: 466 EQTEILNSESCTQYPPVLVGEDSGIEAKELCVDNDVSTDSSLKGSDPLENQEQGSGSSGS 525
Query: 1094 PLESLPCEEG--EDLSLAECEELYGPDKEPLVSKFPEVSQKPCGLLDGEAQAENKCAGEA 1151
+++ C E ED ++ G +P+ EVS+ +L E ++ G A
Sbjct: 526 EVQASVCTESPPEDFLTCPPSDIEG--HQPVSGPLGEVSENATPVLSDERAEDSLMVGNA 583
>ZFIN|ZDB-GENE-041210-22 [details] [associations]
symbol:scaf11 "SR-related CTD-associated factor 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-041210-22 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AL929171 IPI:IPI01024158
Ensembl:ENSDART00000148486 ArrayExpress:F8W5M3 Bgee:F8W5M3
Uniprot:F8W5M3
Length = 1145
Score = 121 (47.7 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 14 NTENDLLNFECGRCGICMDVV--IDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71
N+E+ L + E RC IC++ DR V DCC+H +C ACI W+ + CP+ + F +
Sbjct: 11 NSEDTLEDEESQRCPICLNRPRRSDRAVPDCCRHVYCSACILRWAQMVQSCPVDRRPFSV 70
Query: 72 I 72
I
Sbjct: 71 I 71
Score = 62 (26.9 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 46/205 (22%), Positives = 77/205 (37%)
Query: 257 PYGGDRNAKSESNERTDIQSMLQAQEPELSFSQDASFCLPSTSLGSSEVKTDSADEKLNE 316
P G +R S ++ ++ +A S + S+S S + TD+ + LN+
Sbjct: 245 PKGEERKGTRGSGSKSSVKPA-EAPATRRSSRRSRGEAEDSSSAHSQQNDTDNTSQTLND 303
Query: 317 QSSCG----GVKSFLG-KTFNEP----YPGNKPSDCISNVDLHL--GLSMSKSVADTNKY 365
+S G G KT P + + + H G + S+ + T++
Sbjct: 304 TASTSRGQQGNNPRSGVKTRGRPKKLKVEKREDEEQEPEAENHKEDGAAESEE-SKTDQK 362
Query: 366 LTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNHDNCSGINKEITTKKVT 425
DQI G Q ++E + E ++ P EN N D + +E+ TK V
Sbjct: 363 ANSDQIDGG-QDPVDTKEKMEEENETSPS---ENKP--DDADNQDEETAEEEEVVTKNVV 416
Query: 426 EVPAKKIRAEKLTQTNPHKDEANAS 450
E R E +T + NAS
Sbjct: 417 EEDDNS-RQEVMTDDEDQVELMNAS 440
Score = 44 (20.5 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 501 KNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIREAVRNRSSKDC 555
K AD S K++E ++ + + + A K + + + E +E VR K C
Sbjct: 1057 KAHADSSKKEKEKKLQIQERAVNEVKAAIKPYYQKNEINKDEYKEIVRKAVEKVC 1111
>POMBASE|SPCC162.08c [details] [associations]
symbol:nup211 "nucleoporin nup211" species:4896
"Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0006606 "protein import into nucleus" evidence=ISO] [GO:0031965
"nuclear membrane" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0043021 "ribonucleoprotein complex binding"
evidence=ISO] [GO:0051301 "cell division" evidence=IMP]
InterPro:IPR012929 Pfam:PF07926 PomBase:SPCC162.08c GO:GO:0005737
GO:GO:0051301 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0031965
GO:GO:0005643 GO:GO:0006606 eggNOG:NOG12793 GO:GO:0006406 KO:K09291
GO:GO:0043021 GO:GO:0034399 OrthoDB:EOG4QRMC3 PIR:T41023
RefSeq:NP_588236.1 HSSP:Q72LN8 ProteinModelPortal:O74424
IntAct:O74424 STRING:O74424 EnsemblFungi:SPCC162.08c.1
GeneID:2538843 KEGG:spo:SPCC162.08c OMA:HARESIS NextBio:20800025
Uniprot:O74424
Length = 1837
Score = 129 (50.5 bits), Expect = 0.00082, P = 0.00082
Identities = 98/471 (20%), Positives = 176/471 (37%)
Query: 353 LSMSKSVADTNKYLTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNHDNC 412
L K +T T + + QQ N E + K A +N+++ ++ C
Sbjct: 1364 LEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLAAAW--NEKC 1421
Query: 413 SGINKEITTKKVTEVPAKKIRAEKLTQTNPHKDEANASILANSKKFPTLIAGRRHEKSKL 472
+ K T+ ++ E LT N NA A K+ +L +
Sbjct: 1422 ENLKKSSLTRFA------HLKQE-LTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESA 1474
Query: 473 CPEKVDVTSDIMSIVKGTKCKLPKGLAH-KNSADRSSKDRENVSG-LRVKKIMKRPAEDK 530
+ +T + +K K + K LA KN + + + G + + K E +
Sbjct: 1475 SSDAEQITKEQFEQLKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELR 1534
Query: 531 DSSE-LVQELRKEIREAVRNRSSKDCDENLFDPKLLAAFRAAIAGPK--CEPVKQPAHLA 587
E LVQ+++ E R +L + +A R+ + K E K+ LA
Sbjct: 1535 SDKEGLVQQVQNLSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEKETEILA 1594
Query: 588 VKVKKSMLEKGKVRESLTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATKTEKIGTL-- 645
+ + + EK K +E L ++ N +R + E+E + + I +
Sbjct: 1595 AR-SELVAEKEKTKEELENQL--NEKSQRIK------ELEEQAQKNSSENTHDNIDDMIK 1645
Query: 646 KSVLDLLRNNSQSSDTEQSTECQETNPILSRLYLADTSVFPRKDNIMPLSALKATDNSEQ 705
+ V + L+ NS + D + ET S+ A SV+ +K + + + E
Sbjct: 1646 QQVEEKLKENSANFDVKLKKVVAETE-FRSK---AKISVYEKKTRDLQNKITQLEETIEN 1701
Query: 706 SKEQAISMEKPLKLSSDNCASKVAETNKVSSKVGVLSAY--EKGTRNMSCSKSNAALSKV 763
+Q + EK +D S V ET V+SK A + T S + + S
Sbjct: 1702 LNKQLSNPEK-----TDESTSSVTETKPVTSKPTASKADVGQNATEASSAKREPSGKSLS 1756
Query: 764 HPIQLGDPKVNSLKGTATSDDV--KVDKRKWALEILARKTAVACKSATHEK 812
+Q G K ++ A S V K D K ++ +++ A + +A + K
Sbjct: 1757 ARLQ-GTGKQKGVQRPAVSRPVPMKPDSGKLSITGASKRIATSKNAAQNAK 1806
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.128 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1225 1216 0.00098 123 3 11 23 0.48 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 627 (67 KB)
Total size of DFA: 541 KB (2245 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 146.65u 0.19s 146.84t Elapsed: 00:00:06
Total cpu time: 146.66u 0.19s 146.85t Elapsed: 00:00:06
Start: Mon May 20 19:15:14 2013 End: Mon May 20 19:15:20 2013